Multiple sequence alignment - TraesCS5B01G169300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G169300 chr5B 100.000 2706 0 0 1 2706 313351352 313348647 0.000000e+00 4998.0
1 TraesCS5B01G169300 chr5B 85.816 564 35 20 1408 1969 313311221 313310701 8.460000e-155 556.0
2 TraesCS5B01G169300 chr5B 84.091 484 55 15 715 1183 313311929 313311453 5.310000e-122 448.0
3 TraesCS5B01G169300 chr5B 95.361 194 8 1 210 402 680850976 680850783 9.410000e-80 307.0
4 TraesCS5B01G169300 chr5B 93.689 206 10 2 1179 1381 313311360 313311155 3.380000e-79 305.0
5 TraesCS5B01G169300 chr5B 94.872 195 9 1 221 414 84580263 84580457 1.220000e-78 303.0
6 TraesCS5B01G169300 chr5B 94.643 112 3 2 1318 1426 313349990 313349879 1.290000e-38 171.0
7 TraesCS5B01G169300 chr5B 94.643 112 3 2 1363 1474 313350035 313349927 1.290000e-38 171.0
8 TraesCS5B01G169300 chr5B 91.045 67 3 2 1363 1426 313311221 313311155 1.330000e-13 87.9
9 TraesCS5B01G169300 chr5B 72.789 294 64 15 2150 2432 638594694 638594982 4.800000e-13 86.1
10 TraesCS5B01G169300 chr5B 89.062 64 4 3 386 447 106364794 106364732 2.890000e-10 76.8
11 TraesCS5B01G169300 chr5B 87.692 65 5 3 386 448 580833489 580833426 3.740000e-09 73.1
12 TraesCS5B01G169300 chr5D 93.422 973 33 15 464 1426 276554410 276553459 0.000000e+00 1413.0
13 TraesCS5B01G169300 chr5D 85.831 614 56 17 1408 2019 276546595 276546011 8.230000e-175 623.0
14 TraesCS5B01G169300 chr5D 85.393 623 49 20 1363 1972 276553570 276552977 2.300000e-170 608.0
15 TraesCS5B01G169300 chr5D 84.134 479 57 13 715 1183 276547301 276546832 1.910000e-121 446.0
16 TraesCS5B01G169300 chr5D 87.255 204 21 3 1180 1382 276467826 276467627 7.540000e-56 228.0
17 TraesCS5B01G169300 chr5A 89.220 974 57 26 458 1426 364979227 364978297 0.000000e+00 1173.0
18 TraesCS5B01G169300 chr5A 91.559 699 40 8 1363 2061 364978408 364977729 0.000000e+00 946.0
19 TraesCS5B01G169300 chr5A 89.407 472 38 8 715 1183 364970863 364970401 3.880000e-163 584.0
20 TraesCS5B01G169300 chr5A 83.579 542 35 26 1440 1974 364970160 364969666 2.460000e-125 459.0
21 TraesCS5B01G169300 chr5A 87.533 377 46 1 2211 2586 364977382 364977006 4.140000e-118 435.0
22 TraesCS5B01G169300 chr5A 94.444 162 9 0 1180 1341 364970312 364970151 1.610000e-62 250.0
23 TraesCS5B01G169300 chr5A 84.000 125 20 0 2581 2705 364976816 364976692 1.320000e-23 121.0
24 TraesCS5B01G169300 chr5A 95.522 67 3 0 622 688 364970987 364970921 1.020000e-19 108.0
25 TraesCS5B01G169300 chr6B 95.855 193 8 0 219 411 525106237 525106429 2.020000e-81 313.0
26 TraesCS5B01G169300 chr4B 94.949 198 9 1 218 414 206242721 206242918 2.620000e-80 309.0
27 TraesCS5B01G169300 chr4B 95.385 195 8 1 221 414 328009287 328009093 2.620000e-80 309.0
28 TraesCS5B01G169300 chr4B 94.444 198 10 1 218 414 330634611 330634808 1.220000e-78 303.0
29 TraesCS5B01G169300 chr6D 94.872 195 9 1 221 414 468312646 468312452 1.220000e-78 303.0
30 TraesCS5B01G169300 chr2D 94.444 198 10 1 218 414 610329667 610329864 1.220000e-78 303.0
31 TraesCS5B01G169300 chr1B 94.444 198 10 1 218 414 174407315 174407512 1.220000e-78 303.0
32 TraesCS5B01G169300 chr1B 83.333 132 20 2 2164 2294 8862382 8862252 1.320000e-23 121.0
33 TraesCS5B01G169300 chr1B 86.957 69 6 3 384 450 396594819 396594752 1.040000e-09 75.0
34 TraesCS5B01G169300 chr3B 78.571 266 54 3 2443 2706 769310483 769310219 3.580000e-39 172.0
35 TraesCS5B01G169300 chr3B 84.722 72 7 4 398 466 173387908 173387978 4.830000e-08 69.4
36 TraesCS5B01G169300 chr2B 91.667 60 2 2 398 455 593022488 593022546 2.230000e-11 80.5
37 TraesCS5B01G169300 chr1D 88.406 69 5 3 384 450 295184658 295184591 2.230000e-11 80.5
38 TraesCS5B01G169300 chr1A 94.340 53 1 2 398 448 340015053 340015001 2.230000e-11 80.5
39 TraesCS5B01G169300 chr1A 94.444 36 1 1 2251 2285 59959550 59959515 1.000000e-03 54.7
40 TraesCS5B01G169300 chr6A 82.955 88 14 1 2217 2303 611572320 611572407 8.030000e-11 78.7
41 TraesCS5B01G169300 chr4D 89.231 65 4 3 386 448 503153879 503153942 8.030000e-11 78.7
42 TraesCS5B01G169300 chr4A 95.833 48 0 1 406 451 577472515 577472468 2.890000e-10 76.8
43 TraesCS5B01G169300 chr4A 91.111 45 4 0 179 223 736113377 736113421 8.090000e-06 62.1
44 TraesCS5B01G169300 chr3D 76.923 117 23 4 2257 2370 327518822 327518707 2.250000e-06 63.9
45 TraesCS5B01G169300 chr3A 92.500 40 2 1 2248 2286 503854029 503854068 3.760000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G169300 chr5B 313348647 313351352 2705 True 1780.000 4998 96.428667 1 2706 3 chr5B.!!$R5 2705
1 TraesCS5B01G169300 chr5B 313310701 313311929 1228 True 349.225 556 88.660250 715 1969 4 chr5B.!!$R4 1254
2 TraesCS5B01G169300 chr5D 276552977 276554410 1433 True 1010.500 1413 89.407500 464 1972 2 chr5D.!!$R3 1508
3 TraesCS5B01G169300 chr5D 276546011 276547301 1290 True 534.500 623 84.982500 715 2019 2 chr5D.!!$R2 1304
4 TraesCS5B01G169300 chr5A 364976692 364979227 2535 True 668.750 1173 88.078000 458 2705 4 chr5A.!!$R2 2247
5 TraesCS5B01G169300 chr5A 364969666 364970987 1321 True 350.250 584 90.738000 622 1974 4 chr5A.!!$R1 1352

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
496 497 0.109086 CTCAGCTGTCTACACCACGG 60.109 60.0 14.67 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2366 2781 0.038801 GTTGCTTGCTTCCTGAAGGC 60.039 55.0 8.85 4.7 38.8 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.689501 AATCCGTAAAGAAAAAGGTATGGATAA 57.310 29.630 4.19 0.00 40.10 1.75
27 28 8.496707 TCCGTAAAGAAAAAGGTATGGATAAC 57.503 34.615 0.00 0.00 28.70 1.89
28 29 8.323567 TCCGTAAAGAAAAAGGTATGGATAACT 58.676 33.333 0.00 0.00 28.70 2.24
29 30 8.395633 CCGTAAAGAAAAAGGTATGGATAACTG 58.604 37.037 0.00 0.00 29.04 3.16
30 31 8.395633 CGTAAAGAAAAAGGTATGGATAACTGG 58.604 37.037 0.00 0.00 29.04 4.00
31 32 6.775594 AAGAAAAAGGTATGGATAACTGGC 57.224 37.500 0.00 0.00 29.04 4.85
32 33 5.201243 AGAAAAAGGTATGGATAACTGGCC 58.799 41.667 0.00 0.00 29.04 5.36
33 34 4.601406 AAAAGGTATGGATAACTGGCCA 57.399 40.909 4.71 4.71 38.78 5.36
34 35 4.814224 AAAGGTATGGATAACTGGCCAT 57.186 40.909 5.51 0.00 46.21 4.40
35 36 4.814224 AAGGTATGGATAACTGGCCATT 57.186 40.909 5.51 0.00 42.03 3.16
36 37 4.373156 AGGTATGGATAACTGGCCATTC 57.627 45.455 5.51 0.77 42.03 2.67
37 38 3.074412 GGTATGGATAACTGGCCATTCG 58.926 50.000 5.51 0.00 42.03 3.34
38 39 3.244422 GGTATGGATAACTGGCCATTCGA 60.244 47.826 5.51 0.00 42.03 3.71
39 40 2.325583 TGGATAACTGGCCATTCGAC 57.674 50.000 5.51 0.00 0.00 4.20
40 41 1.217882 GGATAACTGGCCATTCGACG 58.782 55.000 5.51 0.00 0.00 5.12
41 42 1.472728 GGATAACTGGCCATTCGACGT 60.473 52.381 5.51 0.00 0.00 4.34
42 43 2.223876 GGATAACTGGCCATTCGACGTA 60.224 50.000 5.51 0.00 0.00 3.57
43 44 3.554337 GGATAACTGGCCATTCGACGTAT 60.554 47.826 5.51 0.00 0.00 3.06
44 45 4.321452 GGATAACTGGCCATTCGACGTATA 60.321 45.833 5.51 0.00 0.00 1.47
45 46 3.746045 AACTGGCCATTCGACGTATAT 57.254 42.857 5.51 0.00 0.00 0.86
46 47 3.746045 ACTGGCCATTCGACGTATATT 57.254 42.857 5.51 0.00 0.00 1.28
47 48 4.067972 ACTGGCCATTCGACGTATATTT 57.932 40.909 5.51 0.00 0.00 1.40
48 49 4.448210 ACTGGCCATTCGACGTATATTTT 58.552 39.130 5.51 0.00 0.00 1.82
49 50 4.879545 ACTGGCCATTCGACGTATATTTTT 59.120 37.500 5.51 0.00 0.00 1.94
69 70 4.857871 TTTCACACACTTTCTTCAGACG 57.142 40.909 0.00 0.00 0.00 4.18
70 71 2.821546 TCACACACTTTCTTCAGACGG 58.178 47.619 0.00 0.00 0.00 4.79
71 72 1.261619 CACACACTTTCTTCAGACGGC 59.738 52.381 0.00 0.00 0.00 5.68
72 73 1.134521 ACACACTTTCTTCAGACGGCA 60.135 47.619 0.00 0.00 0.00 5.69
73 74 1.939934 CACACTTTCTTCAGACGGCAA 59.060 47.619 0.00 0.00 0.00 4.52
74 75 2.032549 CACACTTTCTTCAGACGGCAAG 60.033 50.000 0.00 0.00 0.00 4.01
75 76 2.158957 ACACTTTCTTCAGACGGCAAGA 60.159 45.455 0.00 0.00 0.00 3.02
76 77 2.478134 CACTTTCTTCAGACGGCAAGAG 59.522 50.000 0.00 0.00 30.32 2.85
77 78 1.462670 CTTTCTTCAGACGGCAAGAGC 59.537 52.381 0.00 0.00 41.10 4.09
78 79 0.392706 TTCTTCAGACGGCAAGAGCA 59.607 50.000 0.00 0.00 44.61 4.26
79 80 0.392706 TCTTCAGACGGCAAGAGCAA 59.607 50.000 0.00 0.00 44.61 3.91
80 81 1.202639 TCTTCAGACGGCAAGAGCAAA 60.203 47.619 0.00 0.00 44.61 3.68
81 82 1.603802 CTTCAGACGGCAAGAGCAAAA 59.396 47.619 0.00 0.00 44.61 2.44
82 83 1.674359 TCAGACGGCAAGAGCAAAAA 58.326 45.000 0.00 0.00 44.61 1.94
101 102 4.367039 AAAATTCAGAACCCTCTTCCGA 57.633 40.909 0.00 0.00 0.00 4.55
102 103 3.336138 AATTCAGAACCCTCTTCCGAC 57.664 47.619 0.00 0.00 0.00 4.79
103 104 1.712056 TTCAGAACCCTCTTCCGACA 58.288 50.000 0.00 0.00 0.00 4.35
104 105 1.712056 TCAGAACCCTCTTCCGACAA 58.288 50.000 0.00 0.00 0.00 3.18
105 106 2.043992 TCAGAACCCTCTTCCGACAAA 58.956 47.619 0.00 0.00 0.00 2.83
106 107 2.436542 TCAGAACCCTCTTCCGACAAAA 59.563 45.455 0.00 0.00 0.00 2.44
107 108 3.072476 TCAGAACCCTCTTCCGACAAAAT 59.928 43.478 0.00 0.00 0.00 1.82
108 109 3.189287 CAGAACCCTCTTCCGACAAAATG 59.811 47.826 0.00 0.00 0.00 2.32
109 110 3.072476 AGAACCCTCTTCCGACAAAATGA 59.928 43.478 0.00 0.00 0.00 2.57
110 111 2.779506 ACCCTCTTCCGACAAAATGAC 58.220 47.619 0.00 0.00 0.00 3.06
111 112 2.084546 CCCTCTTCCGACAAAATGACC 58.915 52.381 0.00 0.00 0.00 4.02
112 113 2.290323 CCCTCTTCCGACAAAATGACCT 60.290 50.000 0.00 0.00 0.00 3.85
113 114 3.412386 CCTCTTCCGACAAAATGACCTT 58.588 45.455 0.00 0.00 0.00 3.50
114 115 3.821033 CCTCTTCCGACAAAATGACCTTT 59.179 43.478 0.00 0.00 0.00 3.11
115 116 5.001232 CCTCTTCCGACAAAATGACCTTTA 58.999 41.667 0.00 0.00 0.00 1.85
116 117 5.106673 CCTCTTCCGACAAAATGACCTTTAC 60.107 44.000 0.00 0.00 0.00 2.01
117 118 5.617252 TCTTCCGACAAAATGACCTTTACT 58.383 37.500 0.00 0.00 0.00 2.24
118 119 5.468746 TCTTCCGACAAAATGACCTTTACTG 59.531 40.000 0.00 0.00 0.00 2.74
119 120 4.963373 TCCGACAAAATGACCTTTACTGA 58.037 39.130 0.00 0.00 0.00 3.41
120 121 5.556915 TCCGACAAAATGACCTTTACTGAT 58.443 37.500 0.00 0.00 0.00 2.90
121 122 6.703319 TCCGACAAAATGACCTTTACTGATA 58.297 36.000 0.00 0.00 0.00 2.15
122 123 6.816640 TCCGACAAAATGACCTTTACTGATAG 59.183 38.462 0.00 0.00 0.00 2.08
123 124 6.594159 CCGACAAAATGACCTTTACTGATAGT 59.406 38.462 0.00 0.00 0.00 2.12
124 125 7.119262 CCGACAAAATGACCTTTACTGATAGTT 59.881 37.037 0.00 0.00 0.00 2.24
125 126 8.169268 CGACAAAATGACCTTTACTGATAGTTC 58.831 37.037 0.00 0.00 0.00 3.01
126 127 8.336801 ACAAAATGACCTTTACTGATAGTTCC 57.663 34.615 0.00 0.00 0.00 3.62
127 128 7.942341 ACAAAATGACCTTTACTGATAGTTCCA 59.058 33.333 0.00 0.00 0.00 3.53
128 129 8.454106 CAAAATGACCTTTACTGATAGTTCCAG 58.546 37.037 0.00 0.00 37.64 3.86
129 130 5.677319 TGACCTTTACTGATAGTTCCAGG 57.323 43.478 0.00 0.00 36.03 4.45
130 131 5.338632 TGACCTTTACTGATAGTTCCAGGA 58.661 41.667 0.00 0.00 36.03 3.86
131 132 5.783360 TGACCTTTACTGATAGTTCCAGGAA 59.217 40.000 0.00 0.00 36.03 3.36
132 133 6.443849 TGACCTTTACTGATAGTTCCAGGAAT 59.556 38.462 4.80 0.00 34.70 3.01
133 134 7.037586 TGACCTTTACTGATAGTTCCAGGAATT 60.038 37.037 4.80 3.41 34.70 2.17
134 135 7.339482 ACCTTTACTGATAGTTCCAGGAATTC 58.661 38.462 4.80 4.16 34.70 2.17
135 136 7.037586 ACCTTTACTGATAGTTCCAGGAATTCA 60.038 37.037 4.80 8.46 34.70 2.57
136 137 7.829211 CCTTTACTGATAGTTCCAGGAATTCAA 59.171 37.037 4.80 0.00 34.70 2.69
137 138 9.401058 CTTTACTGATAGTTCCAGGAATTCAAT 57.599 33.333 4.80 2.42 34.70 2.57
140 141 8.738645 ACTGATAGTTCCAGGAATTCAATAAC 57.261 34.615 4.80 6.02 36.03 1.89
141 142 7.495934 ACTGATAGTTCCAGGAATTCAATAACG 59.504 37.037 4.80 0.93 36.03 3.18
142 143 6.765989 TGATAGTTCCAGGAATTCAATAACGG 59.234 38.462 4.80 0.00 0.00 4.44
143 144 3.694566 AGTTCCAGGAATTCAATAACGGC 59.305 43.478 4.80 0.00 0.00 5.68
144 145 3.358111 TCCAGGAATTCAATAACGGCA 57.642 42.857 7.93 0.00 0.00 5.69
145 146 3.278574 TCCAGGAATTCAATAACGGCAG 58.721 45.455 7.93 0.00 0.00 4.85
146 147 3.054728 TCCAGGAATTCAATAACGGCAGA 60.055 43.478 7.93 0.00 0.00 4.26
147 148 3.694072 CCAGGAATTCAATAACGGCAGAA 59.306 43.478 7.93 0.00 0.00 3.02
148 149 4.157656 CCAGGAATTCAATAACGGCAGAAA 59.842 41.667 7.93 0.00 0.00 2.52
149 150 5.095490 CAGGAATTCAATAACGGCAGAAAC 58.905 41.667 7.93 0.00 0.00 2.78
150 151 4.764823 AGGAATTCAATAACGGCAGAAACA 59.235 37.500 7.93 0.00 0.00 2.83
151 152 5.242838 AGGAATTCAATAACGGCAGAAACAA 59.757 36.000 7.93 0.00 0.00 2.83
152 153 5.923684 GGAATTCAATAACGGCAGAAACAAA 59.076 36.000 7.93 0.00 0.00 2.83
153 154 6.128929 GGAATTCAATAACGGCAGAAACAAAC 60.129 38.462 7.93 0.00 0.00 2.93
154 155 4.902443 TCAATAACGGCAGAAACAAACA 57.098 36.364 0.00 0.00 0.00 2.83
155 156 5.250235 TCAATAACGGCAGAAACAAACAA 57.750 34.783 0.00 0.00 0.00 2.83
156 157 5.651530 TCAATAACGGCAGAAACAAACAAA 58.348 33.333 0.00 0.00 0.00 2.83
157 158 6.276847 TCAATAACGGCAGAAACAAACAAAT 58.723 32.000 0.00 0.00 0.00 2.32
158 159 7.426410 TCAATAACGGCAGAAACAAACAAATA 58.574 30.769 0.00 0.00 0.00 1.40
159 160 8.085296 TCAATAACGGCAGAAACAAACAAATAT 58.915 29.630 0.00 0.00 0.00 1.28
160 161 9.347934 CAATAACGGCAGAAACAAACAAATATA 57.652 29.630 0.00 0.00 0.00 0.86
163 164 8.460831 AACGGCAGAAACAAACAAATATATTC 57.539 30.769 0.00 0.00 0.00 1.75
164 165 7.826690 ACGGCAGAAACAAACAAATATATTCT 58.173 30.769 0.00 0.00 0.00 2.40
165 166 8.952278 ACGGCAGAAACAAACAAATATATTCTA 58.048 29.630 0.00 0.00 0.00 2.10
166 167 9.950680 CGGCAGAAACAAACAAATATATTCTAT 57.049 29.630 0.00 0.00 0.00 1.98
186 187 9.615660 ATTCTATATAAGTATCACCTGTCCCAA 57.384 33.333 0.00 0.00 0.00 4.12
187 188 9.442062 TTCTATATAAGTATCACCTGTCCCAAA 57.558 33.333 0.00 0.00 0.00 3.28
188 189 9.442062 TCTATATAAGTATCACCTGTCCCAAAA 57.558 33.333 0.00 0.00 0.00 2.44
192 193 8.980481 ATAAGTATCACCTGTCCCAAAATAAG 57.020 34.615 0.00 0.00 0.00 1.73
193 194 6.388619 AGTATCACCTGTCCCAAAATAAGT 57.611 37.500 0.00 0.00 0.00 2.24
194 195 7.504926 AGTATCACCTGTCCCAAAATAAGTA 57.495 36.000 0.00 0.00 0.00 2.24
195 196 8.102484 AGTATCACCTGTCCCAAAATAAGTAT 57.898 34.615 0.00 0.00 0.00 2.12
196 197 8.211629 AGTATCACCTGTCCCAAAATAAGTATC 58.788 37.037 0.00 0.00 0.00 2.24
197 198 6.636454 TCACCTGTCCCAAAATAAGTATCT 57.364 37.500 0.00 0.00 0.00 1.98
198 199 6.650120 TCACCTGTCCCAAAATAAGTATCTC 58.350 40.000 0.00 0.00 0.00 2.75
199 200 6.214615 TCACCTGTCCCAAAATAAGTATCTCA 59.785 38.462 0.00 0.00 0.00 3.27
200 201 6.884295 CACCTGTCCCAAAATAAGTATCTCAA 59.116 38.462 0.00 0.00 0.00 3.02
201 202 7.393234 CACCTGTCCCAAAATAAGTATCTCAAA 59.607 37.037 0.00 0.00 0.00 2.69
202 203 7.393515 ACCTGTCCCAAAATAAGTATCTCAAAC 59.606 37.037 0.00 0.00 0.00 2.93
203 204 7.611855 CCTGTCCCAAAATAAGTATCTCAAACT 59.388 37.037 0.00 0.00 0.00 2.66
204 205 8.934023 TGTCCCAAAATAAGTATCTCAAACTT 57.066 30.769 0.00 0.00 40.25 2.66
216 217 9.477484 AAGTATCTCAAACTTACTACAACACTG 57.523 33.333 0.00 0.00 35.44 3.66
217 218 8.639761 AGTATCTCAAACTTACTACAACACTGT 58.360 33.333 0.00 0.00 39.75 3.55
218 219 9.903682 GTATCTCAAACTTACTACAACACTGTA 57.096 33.333 0.00 0.00 36.96 2.74
220 221 9.998106 ATCTCAAACTTACTACAACACTGTATT 57.002 29.630 0.00 0.00 37.41 1.89
225 226 9.498176 AAACTTACTACAACACTGTATTAAGGG 57.502 33.333 18.68 4.80 46.04 3.95
226 227 8.426569 ACTTACTACAACACTGTATTAAGGGA 57.573 34.615 18.68 0.00 46.04 4.20
227 228 8.529476 ACTTACTACAACACTGTATTAAGGGAG 58.471 37.037 18.68 3.94 46.04 4.30
228 229 6.930068 ACTACAACACTGTATTAAGGGAGT 57.070 37.500 0.00 0.00 37.41 3.85
229 230 9.532494 TTACTACAACACTGTATTAAGGGAGTA 57.468 33.333 0.00 0.00 37.41 2.59
230 231 7.834803 ACTACAACACTGTATTAAGGGAGTAC 58.165 38.462 0.00 0.00 37.41 2.73
231 232 6.046290 ACAACACTGTATTAAGGGAGTACC 57.954 41.667 0.00 0.00 34.57 3.34
232 233 5.783875 ACAACACTGTATTAAGGGAGTACCT 59.216 40.000 0.00 0.00 43.07 3.08
233 234 6.955851 ACAACACTGTATTAAGGGAGTACCTA 59.044 38.462 0.00 0.00 41.18 3.08
234 235 7.123847 ACAACACTGTATTAAGGGAGTACCTAG 59.876 40.741 0.00 0.00 41.18 3.02
281 282 8.961294 ATTTGGTCTCATTCATTTTGAAAACA 57.039 26.923 0.00 0.00 40.12 2.83
282 283 8.783833 TTTGGTCTCATTCATTTTGAAAACAA 57.216 26.923 0.00 0.00 40.12 2.83
283 284 8.422973 TTGGTCTCATTCATTTTGAAAACAAG 57.577 30.769 0.00 0.00 40.12 3.16
284 285 7.780064 TGGTCTCATTCATTTTGAAAACAAGA 58.220 30.769 0.00 0.00 40.12 3.02
285 286 8.256605 TGGTCTCATTCATTTTGAAAACAAGAA 58.743 29.630 0.00 0.00 40.12 2.52
286 287 8.542953 GGTCTCATTCATTTTGAAAACAAGAAC 58.457 33.333 0.00 0.00 40.12 3.01
287 288 9.086336 GTCTCATTCATTTTGAAAACAAGAACA 57.914 29.630 0.00 0.00 40.12 3.18
288 289 9.304731 TCTCATTCATTTTGAAAACAAGAACAG 57.695 29.630 0.00 0.00 40.12 3.16
289 290 9.304731 CTCATTCATTTTGAAAACAAGAACAGA 57.695 29.630 0.00 0.86 40.12 3.41
290 291 9.820725 TCATTCATTTTGAAAACAAGAACAGAT 57.179 25.926 0.00 0.00 40.12 2.90
296 297 8.696410 TTTTGAAAACAAGAACAGATACAACC 57.304 30.769 0.00 0.00 0.00 3.77
297 298 6.385649 TGAAAACAAGAACAGATACAACCC 57.614 37.500 0.00 0.00 0.00 4.11
298 299 5.888724 TGAAAACAAGAACAGATACAACCCA 59.111 36.000 0.00 0.00 0.00 4.51
299 300 5.767816 AAACAAGAACAGATACAACCCAC 57.232 39.130 0.00 0.00 0.00 4.61
300 301 3.399330 ACAAGAACAGATACAACCCACG 58.601 45.455 0.00 0.00 0.00 4.94
301 302 3.181458 ACAAGAACAGATACAACCCACGT 60.181 43.478 0.00 0.00 0.00 4.49
302 303 3.314541 AGAACAGATACAACCCACGTC 57.685 47.619 0.00 0.00 0.00 4.34
303 304 2.631062 AGAACAGATACAACCCACGTCA 59.369 45.455 0.00 0.00 0.00 4.35
304 305 2.743636 ACAGATACAACCCACGTCAG 57.256 50.000 0.00 0.00 0.00 3.51
305 306 1.337823 ACAGATACAACCCACGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
306 307 0.973632 AGATACAACCCACGTCAGCA 59.026 50.000 0.00 0.00 0.00 4.41
307 308 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
308 309 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
309 310 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
310 311 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
311 312 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
312 313 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
313 314 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
314 315 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
315 316 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
316 317 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
317 318 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
318 319 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
319 320 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
320 321 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
321 322 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
322 323 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
323 324 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
324 325 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
325 326 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
326 327 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
327 328 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
328 329 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
329 330 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
330 331 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
331 332 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
332 333 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
333 334 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
334 335 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
335 336 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
336 337 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
337 338 6.552629 CATCTTATAGCATCACATCCAATGC 58.447 40.000 0.00 0.00 46.84 3.56
344 345 5.710513 GCATCACATCCAATGCCTATAAA 57.289 39.130 0.00 0.00 41.92 1.40
345 346 6.088016 GCATCACATCCAATGCCTATAAAA 57.912 37.500 0.00 0.00 41.92 1.52
346 347 6.154445 GCATCACATCCAATGCCTATAAAAG 58.846 40.000 0.00 0.00 41.92 2.27
347 348 6.016024 GCATCACATCCAATGCCTATAAAAGA 60.016 38.462 0.00 0.00 41.92 2.52
348 349 7.309621 GCATCACATCCAATGCCTATAAAAGAT 60.310 37.037 0.00 0.00 41.92 2.40
349 350 7.514784 TCACATCCAATGCCTATAAAAGATG 57.485 36.000 0.00 0.00 36.73 2.90
350 351 7.289310 TCACATCCAATGCCTATAAAAGATGA 58.711 34.615 0.00 0.00 35.13 2.92
351 352 7.779326 TCACATCCAATGCCTATAAAAGATGAA 59.221 33.333 0.00 0.00 35.13 2.57
352 353 8.582437 CACATCCAATGCCTATAAAAGATGAAT 58.418 33.333 0.00 0.00 35.13 2.57
353 354 8.582437 ACATCCAATGCCTATAAAAGATGAATG 58.418 33.333 0.00 0.00 35.13 2.67
354 355 8.799367 CATCCAATGCCTATAAAAGATGAATGA 58.201 33.333 0.00 0.00 33.35 2.57
355 356 8.400184 TCCAATGCCTATAAAAGATGAATGAG 57.600 34.615 0.00 0.00 0.00 2.90
356 357 8.219868 TCCAATGCCTATAAAAGATGAATGAGA 58.780 33.333 0.00 0.00 0.00 3.27
357 358 8.295288 CCAATGCCTATAAAAGATGAATGAGAC 58.705 37.037 0.00 0.00 0.00 3.36
358 359 7.992754 ATGCCTATAAAAGATGAATGAGACC 57.007 36.000 0.00 0.00 0.00 3.85
359 360 6.899089 TGCCTATAAAAGATGAATGAGACCA 58.101 36.000 0.00 0.00 0.00 4.02
360 361 7.345691 TGCCTATAAAAGATGAATGAGACCAA 58.654 34.615 0.00 0.00 0.00 3.67
361 362 7.833682 TGCCTATAAAAGATGAATGAGACCAAA 59.166 33.333 0.00 0.00 0.00 3.28
362 363 8.854117 GCCTATAAAAGATGAATGAGACCAAAT 58.146 33.333 0.00 0.00 0.00 2.32
396 397 6.343226 CTAGATGAGTTCTAGCAAAACTGC 57.657 41.667 0.32 0.00 45.63 4.40
397 398 6.105333 CTAGATGAGTTCTAGCAAAACTGCT 58.895 40.000 4.83 4.83 45.63 4.24
398 399 4.694509 AGATGAGTTCTAGCAAAACTGCTG 59.305 41.667 9.83 0.88 45.81 4.41
399 400 3.808728 TGAGTTCTAGCAAAACTGCTGT 58.191 40.909 9.83 0.00 45.81 4.40
400 401 4.956085 TGAGTTCTAGCAAAACTGCTGTA 58.044 39.130 9.83 0.00 45.81 2.74
401 402 5.551233 TGAGTTCTAGCAAAACTGCTGTAT 58.449 37.500 9.83 0.00 45.81 2.29
402 403 5.997746 TGAGTTCTAGCAAAACTGCTGTATT 59.002 36.000 9.83 0.00 45.81 1.89
403 404 7.158697 TGAGTTCTAGCAAAACTGCTGTATTA 58.841 34.615 9.83 0.00 45.81 0.98
404 405 7.659799 TGAGTTCTAGCAAAACTGCTGTATTAA 59.340 33.333 9.83 0.00 45.81 1.40
405 406 8.391075 AGTTCTAGCAAAACTGCTGTATTAAA 57.609 30.769 9.83 0.00 45.81 1.52
406 407 8.507249 AGTTCTAGCAAAACTGCTGTATTAAAG 58.493 33.333 9.83 0.00 45.81 1.85
407 408 7.979444 TCTAGCAAAACTGCTGTATTAAAGT 57.021 32.000 9.83 0.00 45.81 2.66
408 409 8.391075 TCTAGCAAAACTGCTGTATTAAAGTT 57.609 30.769 9.83 0.00 45.81 2.66
409 410 9.496873 TCTAGCAAAACTGCTGTATTAAAGTTA 57.503 29.630 9.83 0.00 45.81 2.24
410 411 9.760660 CTAGCAAAACTGCTGTATTAAAGTTAG 57.239 33.333 9.83 0.00 45.81 2.34
411 412 8.166422 AGCAAAACTGCTGTATTAAAGTTAGT 57.834 30.769 0.00 0.00 44.44 2.24
412 413 9.280174 AGCAAAACTGCTGTATTAAAGTTAGTA 57.720 29.630 0.00 0.00 44.44 1.82
440 441 7.653767 AGTTAAGACACTTATTTTGAGACGG 57.346 36.000 0.00 0.00 0.00 4.79
441 442 6.649557 AGTTAAGACACTTATTTTGAGACGGG 59.350 38.462 0.00 0.00 0.00 5.28
442 443 3.939066 AGACACTTATTTTGAGACGGGG 58.061 45.455 0.00 0.00 0.00 5.73
443 444 3.581332 AGACACTTATTTTGAGACGGGGA 59.419 43.478 0.00 0.00 0.00 4.81
444 445 3.933332 GACACTTATTTTGAGACGGGGAG 59.067 47.826 0.00 0.00 0.00 4.30
445 446 3.326880 ACACTTATTTTGAGACGGGGAGT 59.673 43.478 0.00 0.00 0.00 3.85
446 447 4.529377 ACACTTATTTTGAGACGGGGAGTA 59.471 41.667 0.00 0.00 0.00 2.59
447 448 5.189145 ACACTTATTTTGAGACGGGGAGTAT 59.811 40.000 0.00 0.00 0.00 2.12
448 449 6.381994 ACACTTATTTTGAGACGGGGAGTATA 59.618 38.462 0.00 0.00 0.00 1.47
449 450 7.070821 ACACTTATTTTGAGACGGGGAGTATAT 59.929 37.037 0.00 0.00 0.00 0.86
450 451 7.385205 CACTTATTTTGAGACGGGGAGTATATG 59.615 40.741 0.00 0.00 0.00 1.78
451 452 7.289317 ACTTATTTTGAGACGGGGAGTATATGA 59.711 37.037 0.00 0.00 0.00 2.15
452 453 6.688073 ATTTTGAGACGGGGAGTATATGAT 57.312 37.500 0.00 0.00 0.00 2.45
453 454 7.792364 ATTTTGAGACGGGGAGTATATGATA 57.208 36.000 0.00 0.00 0.00 2.15
454 455 7.606135 TTTTGAGACGGGGAGTATATGATAA 57.394 36.000 0.00 0.00 0.00 1.75
455 456 6.835819 TTGAGACGGGGAGTATATGATAAG 57.164 41.667 0.00 0.00 0.00 1.73
456 457 5.262009 TGAGACGGGGAGTATATGATAAGG 58.738 45.833 0.00 0.00 0.00 2.69
457 458 5.014860 TGAGACGGGGAGTATATGATAAGGA 59.985 44.000 0.00 0.00 0.00 3.36
458 459 6.093617 AGACGGGGAGTATATGATAAGGAT 57.906 41.667 0.00 0.00 0.00 3.24
459 460 7.092128 TGAGACGGGGAGTATATGATAAGGATA 60.092 40.741 0.00 0.00 0.00 2.59
460 461 7.827787 AGACGGGGAGTATATGATAAGGATAT 58.172 38.462 0.00 0.00 0.00 1.63
461 462 7.726291 AGACGGGGAGTATATGATAAGGATATG 59.274 40.741 0.00 0.00 0.00 1.78
462 463 6.782988 ACGGGGAGTATATGATAAGGATATGG 59.217 42.308 0.00 0.00 0.00 2.74
496 497 0.109086 CTCAGCTGTCTACACCACGG 60.109 60.000 14.67 0.00 0.00 4.94
500 501 1.623811 AGCTGTCTACACCACGGAAAT 59.376 47.619 0.00 0.00 0.00 2.17
505 506 0.802494 CTACACCACGGAAATGTGCC 59.198 55.000 0.00 0.00 38.55 5.01
509 510 1.305219 ACCACGGAAATGTGCCATCG 61.305 55.000 0.00 0.00 38.55 3.84
521 522 2.437200 TGCCATCGCAAAAGGAAAAG 57.563 45.000 0.00 0.00 43.74 2.27
522 523 1.959985 TGCCATCGCAAAAGGAAAAGA 59.040 42.857 0.00 0.00 43.74 2.52
658 663 3.989698 CGCACTAGCACCGACCAGG 62.990 68.421 0.00 0.00 42.27 4.45
693 741 4.528596 ACTAATACGATATTGAGCCTGGCT 59.471 41.667 23.64 23.64 43.88 4.75
694 742 2.820059 TACGATATTGAGCCTGGCTG 57.180 50.000 28.82 12.31 39.88 4.85
695 743 0.833287 ACGATATTGAGCCTGGCTGT 59.167 50.000 28.82 13.03 39.88 4.40
696 744 1.202580 ACGATATTGAGCCTGGCTGTC 60.203 52.381 28.82 13.79 39.88 3.51
697 745 1.202568 CGATATTGAGCCTGGCTGTCA 60.203 52.381 28.82 16.57 39.88 3.58
699 747 3.484407 GATATTGAGCCTGGCTGTCAAT 58.516 45.455 28.32 28.32 39.88 2.57
700 748 1.471119 ATTGAGCCTGGCTGTCAATG 58.529 50.000 28.82 0.00 39.88 2.82
701 749 0.401356 TTGAGCCTGGCTGTCAATGA 59.599 50.000 28.82 1.04 39.88 2.57
702 750 0.622136 TGAGCCTGGCTGTCAATGAT 59.378 50.000 28.82 0.00 39.88 2.45
703 751 1.005097 TGAGCCTGGCTGTCAATGATT 59.995 47.619 28.82 0.00 39.88 2.57
704 752 1.674962 GAGCCTGGCTGTCAATGATTC 59.325 52.381 28.82 3.43 39.88 2.52
705 753 1.005097 AGCCTGGCTGTCAATGATTCA 59.995 47.619 22.71 0.00 37.57 2.57
706 754 1.404391 GCCTGGCTGTCAATGATTCAG 59.596 52.381 12.43 0.00 0.00 3.02
707 755 2.719739 CCTGGCTGTCAATGATTCAGT 58.280 47.619 3.36 0.00 0.00 3.41
708 756 3.877559 CCTGGCTGTCAATGATTCAGTA 58.122 45.455 3.36 0.00 0.00 2.74
709 757 4.458397 CCTGGCTGTCAATGATTCAGTAT 58.542 43.478 3.36 0.00 0.00 2.12
710 758 5.614308 CCTGGCTGTCAATGATTCAGTATA 58.386 41.667 3.36 0.00 0.00 1.47
711 759 5.699915 CCTGGCTGTCAATGATTCAGTATAG 59.300 44.000 3.36 0.78 0.00 1.31
910 967 3.618150 GTCACACTGCACAAAAGCAAAAT 59.382 39.130 0.00 0.00 45.13 1.82
966 1029 4.608948 AGTGTACTGTCAAAGCTAGCTT 57.391 40.909 24.42 24.42 37.98 3.74
973 1036 3.866651 TGTCAAAGCTAGCTTGGAGATC 58.133 45.455 30.93 20.80 36.73 2.75
1026 1104 6.016610 TGGTTAAGGTATGTTCAGTTTGCTTC 60.017 38.462 0.00 0.00 0.00 3.86
1045 1123 1.819288 TCTCTTGTTCCAGGACTAGCG 59.181 52.381 0.00 0.00 0.00 4.26
1056 1135 1.813786 AGGACTAGCGAGTGTTCAGTC 59.186 52.381 3.45 0.00 35.45 3.51
1057 1136 1.135344 GGACTAGCGAGTGTTCAGTCC 60.135 57.143 3.45 3.50 46.12 3.85
1074 1153 4.940654 TCAGTCCGATCAATTTTGTGCATA 59.059 37.500 0.00 0.00 0.00 3.14
1309 1492 3.374402 CTCAGCGTGTCCTCCGGT 61.374 66.667 0.00 0.00 36.31 5.28
1404 1587 4.564116 CTACGGGTACGGCGGCAG 62.564 72.222 13.24 0.00 46.48 4.85
1410 1593 4.789075 GTACGGCGGCAGCGAGAA 62.789 66.667 13.24 0.00 46.35 2.87
1411 1594 4.492160 TACGGCGGCAGCGAGAAG 62.492 66.667 13.24 0.00 46.35 2.85
1414 1597 3.191539 GGCGGCAGCGAGAAGAAG 61.192 66.667 3.07 0.00 46.35 2.85
1415 1598 3.191539 GCGGCAGCGAGAAGAAGG 61.192 66.667 0.00 0.00 0.00 3.46
1416 1599 2.573869 CGGCAGCGAGAAGAAGGA 59.426 61.111 0.00 0.00 0.00 3.36
1417 1600 1.807573 CGGCAGCGAGAAGAAGGAC 60.808 63.158 0.00 0.00 0.00 3.85
1418 1601 1.807573 GGCAGCGAGAAGAAGGACG 60.808 63.158 0.00 0.00 0.00 4.79
1419 1602 1.807573 GCAGCGAGAAGAAGGACGG 60.808 63.158 0.00 0.00 0.00 4.79
1420 1603 1.807573 CAGCGAGAAGAAGGACGGC 60.808 63.158 0.00 0.00 0.00 5.68
1421 1604 1.979693 AGCGAGAAGAAGGACGGCT 60.980 57.895 0.00 0.00 0.00 5.52
1422 1605 0.680280 AGCGAGAAGAAGGACGGCTA 60.680 55.000 0.00 0.00 0.00 3.93
1423 1606 0.525882 GCGAGAAGAAGGACGGCTAC 60.526 60.000 0.00 0.00 0.00 3.58
1425 1608 0.100861 GAGAAGAAGGACGGCTACGG 59.899 60.000 0.00 0.00 46.48 4.02
1443 1626 2.029073 CGCAGCCTATGGGTACGG 59.971 66.667 0.00 0.00 36.46 4.02
1549 1741 4.344865 GGCTCCAAAGGTGGCGGA 62.345 66.667 0.00 0.00 45.54 5.54
1622 1814 0.673333 TCAGCAGTACAACGCCATGG 60.673 55.000 7.63 7.63 0.00 3.66
1642 1834 0.099436 CGTCCTACCCGGTTTACTCG 59.901 60.000 0.00 0.00 0.00 4.18
1708 1900 2.476619 CGGCTGCAGCATTATGTAGTAC 59.523 50.000 37.63 16.05 44.36 2.73
1709 1901 2.476619 GGCTGCAGCATTATGTAGTACG 59.523 50.000 37.63 0.00 44.36 3.67
1710 1902 3.123804 GCTGCAGCATTATGTAGTACGT 58.876 45.455 33.36 0.00 41.59 3.57
1711 1903 4.295870 GCTGCAGCATTATGTAGTACGTA 58.704 43.478 33.36 0.00 41.59 3.57
1713 1905 5.509716 TGCAGCATTATGTAGTACGTACT 57.490 39.130 29.62 29.62 40.24 2.73
1714 1906 5.278604 TGCAGCATTATGTAGTACGTACTG 58.721 41.667 33.23 18.84 37.10 2.74
1715 1907 5.163591 TGCAGCATTATGTAGTACGTACTGT 60.164 40.000 33.23 21.91 37.10 3.55
1716 1908 6.038492 TGCAGCATTATGTAGTACGTACTGTA 59.962 38.462 33.23 22.93 37.10 2.74
1787 1990 1.146358 GGATAGTTGCGAGCGGTGTC 61.146 60.000 0.00 0.00 0.00 3.67
1823 2026 1.367471 GGCCTGACCCAAAAGTTGC 59.633 57.895 0.00 0.00 0.00 4.17
1825 2028 1.659794 CCTGACCCAAAAGTTGCCG 59.340 57.895 0.00 0.00 0.00 5.69
1867 2070 3.006112 CTCCCTGAGCACTGAGTAGTA 57.994 52.381 0.00 0.00 34.74 1.82
1868 2071 2.685897 CTCCCTGAGCACTGAGTAGTAC 59.314 54.545 0.00 0.00 34.74 2.73
1869 2072 1.402259 CCCTGAGCACTGAGTAGTACG 59.598 57.143 0.00 0.00 34.74 3.67
1870 2073 2.085320 CCTGAGCACTGAGTAGTACGT 58.915 52.381 0.00 0.00 34.74 3.57
1871 2074 3.268330 CCTGAGCACTGAGTAGTACGTA 58.732 50.000 0.00 0.00 34.74 3.57
1892 2110 8.899427 ACGTACTCTACATATGTACAGTACAT 57.101 34.615 35.39 28.03 45.28 2.29
1923 2141 4.679412 GCAATGGTGGTTTGCAGG 57.321 55.556 3.68 0.00 46.78 4.85
1981 2199 4.381505 GGAAACTCAGGTGTTTGCAAGAAA 60.382 41.667 11.77 0.00 44.15 2.52
1982 2200 3.782889 ACTCAGGTGTTTGCAAGAAAC 57.217 42.857 0.00 0.00 0.00 2.78
1984 2202 1.199624 CAGGTGTTTGCAAGAAACGC 58.800 50.000 0.00 1.70 39.26 4.84
2019 2237 2.150397 ATTACTCAAGATACGGCGCC 57.850 50.000 19.07 19.07 0.00 6.53
2024 2242 1.591594 CAAGATACGGCGCCATCGT 60.592 57.895 28.98 20.88 43.64 3.73
2041 2259 0.319211 CGTGCACGGTTAGTTCAGGA 60.319 55.000 31.15 0.00 34.61 3.86
2064 2282 9.158233 AGGAACTGCATCAAAATCATTTATTTG 57.842 29.630 0.00 0.00 35.84 2.32
2065 2283 7.906527 GGAACTGCATCAAAATCATTTATTTGC 59.093 33.333 0.00 4.80 37.85 3.68
2067 2285 8.556213 ACTGCATCAAAATCATTTATTTGCTT 57.444 26.923 10.64 0.00 37.85 3.91
2068 2286 9.656040 ACTGCATCAAAATCATTTATTTGCTTA 57.344 25.926 10.64 0.00 37.85 3.09
2080 2298 9.352784 TCATTTATTTGCTTATTTTTCGGACAG 57.647 29.630 0.00 0.00 0.00 3.51
2081 2299 8.594687 CATTTATTTGCTTATTTTTCGGACAGG 58.405 33.333 0.00 0.00 0.00 4.00
2082 2300 3.569250 TTGCTTATTTTTCGGACAGGC 57.431 42.857 0.00 0.00 0.00 4.85
2083 2301 2.790433 TGCTTATTTTTCGGACAGGCT 58.210 42.857 0.00 0.00 0.00 4.58
2084 2302 3.153919 TGCTTATTTTTCGGACAGGCTT 58.846 40.909 0.00 0.00 0.00 4.35
2085 2303 3.190535 TGCTTATTTTTCGGACAGGCTTC 59.809 43.478 0.00 0.00 0.00 3.86
2086 2304 3.727970 GCTTATTTTTCGGACAGGCTTCG 60.728 47.826 0.00 0.00 0.00 3.79
2087 2305 0.521735 ATTTTTCGGACAGGCTTCGC 59.478 50.000 0.00 0.00 0.00 4.70
2098 2316 3.002277 GGCTTCGCCCCACTAATAC 57.998 57.895 0.00 0.00 44.06 1.89
2100 2318 1.202770 GGCTTCGCCCCACTAATACAT 60.203 52.381 0.00 0.00 44.06 2.29
2101 2319 2.038033 GGCTTCGCCCCACTAATACATA 59.962 50.000 0.00 0.00 44.06 2.29
2102 2320 3.307480 GGCTTCGCCCCACTAATACATAT 60.307 47.826 0.00 0.00 44.06 1.78
2103 2321 4.081309 GGCTTCGCCCCACTAATACATATA 60.081 45.833 0.00 0.00 44.06 0.86
2106 2324 7.270047 GCTTCGCCCCACTAATACATATATAA 58.730 38.462 0.00 0.00 0.00 0.98
2107 2325 7.767198 GCTTCGCCCCACTAATACATATATAAA 59.233 37.037 0.00 0.00 0.00 1.40
2108 2326 9.661563 CTTCGCCCCACTAATACATATATAAAA 57.338 33.333 0.00 0.00 0.00 1.52
2109 2327 9.439500 TTCGCCCCACTAATACATATATAAAAC 57.561 33.333 0.00 0.00 0.00 2.43
2110 2328 8.595421 TCGCCCCACTAATACATATATAAAACA 58.405 33.333 0.00 0.00 0.00 2.83
2111 2329 9.221933 CGCCCCACTAATACATATATAAAACAA 57.778 33.333 0.00 0.00 0.00 2.83
2137 2355 8.728088 ATAAGCAGCAACATAATAAAATACGC 57.272 30.769 0.00 0.00 0.00 4.42
2138 2356 5.204833 AGCAGCAACATAATAAAATACGCG 58.795 37.500 3.53 3.53 0.00 6.01
2140 2358 5.113529 GCAGCAACATAATAAAATACGCGTC 59.886 40.000 18.63 0.00 0.00 5.19
2141 2359 5.619607 CAGCAACATAATAAAATACGCGTCC 59.380 40.000 18.63 0.00 0.00 4.79
2142 2360 4.907582 GCAACATAATAAAATACGCGTCCC 59.092 41.667 18.63 0.00 0.00 4.46
2144 2362 6.487960 CAACATAATAAAATACGCGTCCCAA 58.512 36.000 18.63 0.00 0.00 4.12
2145 2363 6.051646 ACATAATAAAATACGCGTCCCAAC 57.948 37.500 18.63 0.00 0.00 3.77
2146 2364 5.585445 ACATAATAAAATACGCGTCCCAACA 59.415 36.000 18.63 0.00 0.00 3.33
2148 2366 5.570234 AATAAAATACGCGTCCCAACAAT 57.430 34.783 18.63 0.00 0.00 2.71
2149 2367 6.680874 AATAAAATACGCGTCCCAACAATA 57.319 33.333 18.63 0.00 0.00 1.90
2151 2369 2.676632 ATACGCGTCCCAACAATACA 57.323 45.000 18.63 0.00 0.00 2.29
2152 2370 2.452295 TACGCGTCCCAACAATACAA 57.548 45.000 18.63 0.00 0.00 2.41
2153 2371 1.816074 ACGCGTCCCAACAATACAAT 58.184 45.000 5.58 0.00 0.00 2.71
2154 2372 2.975266 ACGCGTCCCAACAATACAATA 58.025 42.857 5.58 0.00 0.00 1.90
2155 2373 3.537580 ACGCGTCCCAACAATACAATAT 58.462 40.909 5.58 0.00 0.00 1.28
2156 2374 4.695396 ACGCGTCCCAACAATACAATATA 58.305 39.130 5.58 0.00 0.00 0.86
2157 2375 5.302360 ACGCGTCCCAACAATACAATATAT 58.698 37.500 5.58 0.00 0.00 0.86
2158 2376 6.457355 ACGCGTCCCAACAATACAATATATA 58.543 36.000 5.58 0.00 0.00 0.86
2160 2378 8.252417 ACGCGTCCCAACAATACAATATATATA 58.748 33.333 5.58 0.00 0.00 0.86
2161 2379 9.256477 CGCGTCCCAACAATACAATATATATAT 57.744 33.333 0.00 0.00 0.00 0.86
2175 2559 1.573108 ATATATGACGGGAGGCCCAG 58.427 55.000 0.00 0.00 45.83 4.45
2180 2564 1.988406 GACGGGAGGCCCAGTTACT 60.988 63.158 0.00 0.00 45.83 2.24
2183 2567 0.906775 CGGGAGGCCCAGTTACTAAA 59.093 55.000 0.00 0.00 45.83 1.85
2186 2570 2.355818 GGGAGGCCCAGTTACTAAACAG 60.356 54.545 0.00 0.00 44.65 3.16
2197 2581 8.893727 CCCAGTTACTAAACAGATTAAAGGATG 58.106 37.037 0.00 0.00 38.12 3.51
2220 2604 9.109393 GATGAACATAAAACTAGAACATGCCTA 57.891 33.333 0.00 0.00 0.00 3.93
2228 2643 6.368779 AACTAGAACATGCCTAACACCTAA 57.631 37.500 0.00 0.00 0.00 2.69
2231 2646 2.801077 ACATGCCTAACACCTAACCC 57.199 50.000 0.00 0.00 0.00 4.11
2242 2657 1.604378 CCTAACCCAGGCCTGACTG 59.396 63.158 34.91 22.68 37.70 3.51
2310 2725 2.572284 GTCGCCGCTACCAAGTCT 59.428 61.111 0.00 0.00 0.00 3.24
2333 2748 5.959618 AAAAGATTAGACTTTTCACCCCG 57.040 39.130 0.00 0.00 43.65 5.73
2350 2765 1.596934 CGGAGCCTAGCACAAGGAA 59.403 57.895 4.10 0.00 39.15 3.36
2356 2771 4.013050 GAGCCTAGCACAAGGAAAAGATT 58.987 43.478 4.10 0.00 39.15 2.40
2360 2775 3.904136 AGCACAAGGAAAAGATTCACG 57.096 42.857 0.00 0.00 37.29 4.35
2361 2776 3.476552 AGCACAAGGAAAAGATTCACGA 58.523 40.909 0.00 0.00 37.29 4.35
2363 2778 3.799035 CACAAGGAAAAGATTCACGACG 58.201 45.455 0.00 0.00 37.29 5.12
2364 2779 2.806244 ACAAGGAAAAGATTCACGACGG 59.194 45.455 0.00 0.00 37.29 4.79
2366 2781 0.094730 GGAAAAGATTCACGACGGCG 59.905 55.000 10.39 10.39 37.29 6.46
2367 2782 0.518559 GAAAAGATTCACGACGGCGC 60.519 55.000 12.58 0.00 42.48 6.53
2371 2786 2.799540 GATTCACGACGGCGCCTTC 61.800 63.158 26.68 24.38 42.48 3.46
2382 2797 2.873288 CGCCTTCAGGAAGCAAGC 59.127 61.111 3.48 1.77 37.11 4.01
2387 2802 1.891150 CCTTCAGGAAGCAAGCAACAT 59.109 47.619 3.48 0.00 37.11 2.71
2391 2806 3.338249 TCAGGAAGCAAGCAACATCTAC 58.662 45.455 0.00 0.00 0.00 2.59
2392 2807 3.008375 TCAGGAAGCAAGCAACATCTACT 59.992 43.478 0.00 0.00 0.00 2.57
2394 2809 3.008375 AGGAAGCAAGCAACATCTACTGA 59.992 43.478 0.00 0.00 0.00 3.41
2395 2810 3.944015 GGAAGCAAGCAACATCTACTGAT 59.056 43.478 0.00 0.00 0.00 2.90
2423 2838 3.726517 CCGGCGCCAGAAACACAG 61.727 66.667 28.98 6.19 0.00 3.66
2450 2865 2.955614 TGCTTAGAAACTCGCCTACAC 58.044 47.619 0.00 0.00 0.00 2.90
2501 2916 2.427320 GTCAGCTCAGCCACACCA 59.573 61.111 0.00 0.00 0.00 4.17
2531 2946 2.125188 GCCAGAGCAGACCAGAGC 60.125 66.667 0.00 0.00 39.53 4.09
2552 2968 1.274167 CTCCCGCCACTACACACTTTA 59.726 52.381 0.00 0.00 0.00 1.85
2560 2976 4.000988 CCACTACACACTTTATCACCCAC 58.999 47.826 0.00 0.00 0.00 4.61
2562 2978 4.451096 CACTACACACTTTATCACCCACAC 59.549 45.833 0.00 0.00 0.00 3.82
2579 2995 1.308998 CACGACCAAAAGGTGAAGCT 58.691 50.000 0.00 0.00 33.58 3.74
2588 3199 2.663196 GGTGAAGCTACCACCGCT 59.337 61.111 18.74 0.00 43.80 5.52
2592 3203 0.901114 TGAAGCTACCACCGCTACCA 60.901 55.000 0.00 0.00 36.56 3.25
2602 3213 3.760035 CGCTACCACGGAGCCTGT 61.760 66.667 0.00 0.00 36.53 4.00
2605 3216 2.034532 TACCACGGAGCCTGTCGA 59.965 61.111 0.00 0.00 0.00 4.20
2616 3227 1.574428 CCTGTCGAAAAGCCAACCG 59.426 57.895 0.00 0.00 0.00 4.44
2618 3229 0.234884 CTGTCGAAAAGCCAACCGTC 59.765 55.000 0.00 0.00 0.00 4.79
2622 3233 1.206831 GAAAAGCCAACCGTCGAGC 59.793 57.895 0.00 0.00 0.00 5.03
2624 3235 2.676163 AAAAGCCAACCGTCGAGCCT 62.676 55.000 0.00 0.00 0.00 4.58
2625 3236 3.883744 AAGCCAACCGTCGAGCCTG 62.884 63.158 0.00 0.00 0.00 4.85
2655 3266 1.813753 CACCGCTCCCGTAACCATG 60.814 63.158 0.00 0.00 0.00 3.66
2678 3289 0.181350 CTAGGCACCTCCAACCATCC 59.819 60.000 0.00 0.00 37.29 3.51
2685 3296 1.004745 ACCTCCAACCATCCACATCAC 59.995 52.381 0.00 0.00 0.00 3.06
2687 3298 0.035534 TCCAACCATCCACATCACGG 60.036 55.000 0.00 0.00 0.00 4.94
2691 3302 2.114670 CCATCCACATCACGGCCAC 61.115 63.158 2.24 0.00 0.00 5.01
2699 3310 3.918253 ATCACGGCCACGCAACCAT 62.918 57.895 2.24 0.00 46.04 3.55
2700 3311 4.403137 CACGGCCACGCAACCATG 62.403 66.667 2.24 0.00 46.04 3.66
2705 3316 1.447317 GGCCACGCAACCATGATAGG 61.447 60.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.117183 GTTATCCATACCTTTTTCTTTACGGAT 57.883 33.333 0.00 0.00 34.12 4.18
2 3 8.323567 AGTTATCCATACCTTTTTCTTTACGGA 58.676 33.333 0.00 0.00 0.00 4.69
3 4 8.395633 CAGTTATCCATACCTTTTTCTTTACGG 58.604 37.037 0.00 0.00 0.00 4.02
4 5 8.395633 CCAGTTATCCATACCTTTTTCTTTACG 58.604 37.037 0.00 0.00 0.00 3.18
6 7 7.340999 GGCCAGTTATCCATACCTTTTTCTTTA 59.659 37.037 0.00 0.00 0.00 1.85
7 8 6.154534 GGCCAGTTATCCATACCTTTTTCTTT 59.845 38.462 0.00 0.00 0.00 2.52
8 9 5.656859 GGCCAGTTATCCATACCTTTTTCTT 59.343 40.000 0.00 0.00 0.00 2.52
9 10 5.201243 GGCCAGTTATCCATACCTTTTTCT 58.799 41.667 0.00 0.00 0.00 2.52
10 11 4.953579 TGGCCAGTTATCCATACCTTTTTC 59.046 41.667 0.00 0.00 0.00 2.29
11 12 4.941713 TGGCCAGTTATCCATACCTTTTT 58.058 39.130 0.00 0.00 0.00 1.94
12 13 4.601406 TGGCCAGTTATCCATACCTTTT 57.399 40.909 0.00 0.00 0.00 2.27
13 14 4.814224 ATGGCCAGTTATCCATACCTTT 57.186 40.909 13.05 0.00 41.03 3.11
14 15 4.729868 GAATGGCCAGTTATCCATACCTT 58.270 43.478 13.05 0.00 41.92 3.50
15 16 3.244561 CGAATGGCCAGTTATCCATACCT 60.245 47.826 13.05 0.00 41.92 3.08
16 17 3.074412 CGAATGGCCAGTTATCCATACC 58.926 50.000 13.05 0.00 41.92 2.73
17 18 3.746492 GTCGAATGGCCAGTTATCCATAC 59.254 47.826 13.05 0.00 41.92 2.39
18 19 3.554129 CGTCGAATGGCCAGTTATCCATA 60.554 47.826 13.05 0.00 41.92 2.74
19 20 2.806745 CGTCGAATGGCCAGTTATCCAT 60.807 50.000 13.05 0.00 44.46 3.41
20 21 1.472552 CGTCGAATGGCCAGTTATCCA 60.473 52.381 13.05 0.00 36.70 3.41
21 22 1.217882 CGTCGAATGGCCAGTTATCC 58.782 55.000 13.05 0.00 0.00 2.59
22 23 1.935933 ACGTCGAATGGCCAGTTATC 58.064 50.000 13.05 6.06 0.00 1.75
23 24 3.746045 ATACGTCGAATGGCCAGTTAT 57.254 42.857 13.05 0.00 0.00 1.89
24 25 4.859304 ATATACGTCGAATGGCCAGTTA 57.141 40.909 13.05 0.00 0.00 2.24
25 26 3.746045 ATATACGTCGAATGGCCAGTT 57.254 42.857 13.05 5.80 0.00 3.16
26 27 3.746045 AATATACGTCGAATGGCCAGT 57.254 42.857 13.05 9.25 0.00 4.00
27 28 5.418310 AAAAATATACGTCGAATGGCCAG 57.582 39.130 13.05 0.00 0.00 4.85
46 47 5.391523 CCGTCTGAAGAAAGTGTGTGAAAAA 60.392 40.000 0.00 0.00 0.00 1.94
47 48 4.094294 CCGTCTGAAGAAAGTGTGTGAAAA 59.906 41.667 0.00 0.00 0.00 2.29
48 49 3.621268 CCGTCTGAAGAAAGTGTGTGAAA 59.379 43.478 0.00 0.00 0.00 2.69
49 50 3.194861 CCGTCTGAAGAAAGTGTGTGAA 58.805 45.455 0.00 0.00 0.00 3.18
50 51 2.821546 CCGTCTGAAGAAAGTGTGTGA 58.178 47.619 0.00 0.00 0.00 3.58
51 52 1.261619 GCCGTCTGAAGAAAGTGTGTG 59.738 52.381 0.00 0.00 0.00 3.82
52 53 1.134521 TGCCGTCTGAAGAAAGTGTGT 60.135 47.619 0.00 0.00 0.00 3.72
53 54 1.581934 TGCCGTCTGAAGAAAGTGTG 58.418 50.000 0.00 0.00 0.00 3.82
54 55 2.158957 TCTTGCCGTCTGAAGAAAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
55 56 2.478134 CTCTTGCCGTCTGAAGAAAGTG 59.522 50.000 0.00 0.00 0.00 3.16
56 57 2.760374 CTCTTGCCGTCTGAAGAAAGT 58.240 47.619 0.00 0.00 0.00 2.66
57 58 1.462670 GCTCTTGCCGTCTGAAGAAAG 59.537 52.381 0.00 0.00 0.00 2.62
58 59 1.202639 TGCTCTTGCCGTCTGAAGAAA 60.203 47.619 0.00 0.00 38.71 2.52
59 60 0.392706 TGCTCTTGCCGTCTGAAGAA 59.607 50.000 0.00 0.00 38.71 2.52
60 61 0.392706 TTGCTCTTGCCGTCTGAAGA 59.607 50.000 0.00 0.00 38.71 2.87
61 62 1.229428 TTTGCTCTTGCCGTCTGAAG 58.771 50.000 0.00 0.00 38.71 3.02
62 63 1.674359 TTTTGCTCTTGCCGTCTGAA 58.326 45.000 0.00 0.00 38.71 3.02
63 64 1.674359 TTTTTGCTCTTGCCGTCTGA 58.326 45.000 0.00 0.00 38.71 3.27
79 80 4.519350 GTCGGAAGAGGGTTCTGAATTTTT 59.481 41.667 0.00 0.00 43.49 1.94
80 81 4.072839 GTCGGAAGAGGGTTCTGAATTTT 58.927 43.478 0.00 0.00 43.49 1.82
81 82 3.072476 TGTCGGAAGAGGGTTCTGAATTT 59.928 43.478 0.00 0.00 43.49 1.82
82 83 2.637872 TGTCGGAAGAGGGTTCTGAATT 59.362 45.455 0.00 0.00 43.49 2.17
83 84 2.257207 TGTCGGAAGAGGGTTCTGAAT 58.743 47.619 0.00 0.00 43.49 2.57
84 85 1.712056 TGTCGGAAGAGGGTTCTGAA 58.288 50.000 0.00 0.00 43.49 3.02
85 86 1.712056 TTGTCGGAAGAGGGTTCTGA 58.288 50.000 0.00 0.00 43.49 3.27
86 87 2.543777 TTTGTCGGAAGAGGGTTCTG 57.456 50.000 0.00 0.00 43.49 3.02
87 88 3.072476 TCATTTTGTCGGAAGAGGGTTCT 59.928 43.478 0.00 0.00 43.49 3.01
88 89 3.188667 GTCATTTTGTCGGAAGAGGGTTC 59.811 47.826 0.00 0.00 43.49 3.62
89 90 3.146847 GTCATTTTGTCGGAAGAGGGTT 58.853 45.455 0.00 0.00 43.49 4.11
90 91 2.552373 GGTCATTTTGTCGGAAGAGGGT 60.552 50.000 0.00 0.00 43.49 4.34
91 92 2.084546 GGTCATTTTGTCGGAAGAGGG 58.915 52.381 0.00 0.00 43.49 4.30
92 93 3.059352 AGGTCATTTTGTCGGAAGAGG 57.941 47.619 0.00 0.00 43.49 3.69
93 94 5.701290 AGTAAAGGTCATTTTGTCGGAAGAG 59.299 40.000 0.00 0.00 34.59 2.85
94 95 5.468746 CAGTAAAGGTCATTTTGTCGGAAGA 59.531 40.000 0.00 0.00 32.48 2.87
95 96 5.468746 TCAGTAAAGGTCATTTTGTCGGAAG 59.531 40.000 0.00 0.00 32.01 3.46
96 97 5.369833 TCAGTAAAGGTCATTTTGTCGGAA 58.630 37.500 0.00 0.00 32.01 4.30
97 98 4.963373 TCAGTAAAGGTCATTTTGTCGGA 58.037 39.130 0.00 0.00 32.01 4.55
98 99 5.880054 ATCAGTAAAGGTCATTTTGTCGG 57.120 39.130 0.00 0.00 32.01 4.79
99 100 7.596749 ACTATCAGTAAAGGTCATTTTGTCG 57.403 36.000 0.00 0.00 32.01 4.35
100 101 8.451748 GGAACTATCAGTAAAGGTCATTTTGTC 58.548 37.037 0.00 0.00 30.67 3.18
101 102 7.942341 TGGAACTATCAGTAAAGGTCATTTTGT 59.058 33.333 0.00 0.00 30.67 2.83
102 103 8.335532 TGGAACTATCAGTAAAGGTCATTTTG 57.664 34.615 0.00 0.00 30.67 2.44
103 104 7.611855 CCTGGAACTATCAGTAAAGGTCATTTT 59.388 37.037 0.00 0.00 30.67 1.82
104 105 7.037586 TCCTGGAACTATCAGTAAAGGTCATTT 60.038 37.037 0.00 0.00 30.67 2.32
105 106 6.443849 TCCTGGAACTATCAGTAAAGGTCATT 59.556 38.462 0.00 0.00 30.67 2.57
106 107 5.964477 TCCTGGAACTATCAGTAAAGGTCAT 59.036 40.000 0.00 0.00 30.67 3.06
107 108 5.338632 TCCTGGAACTATCAGTAAAGGTCA 58.661 41.667 0.00 0.00 30.67 4.02
108 109 5.934402 TCCTGGAACTATCAGTAAAGGTC 57.066 43.478 0.00 0.00 0.00 3.85
109 110 6.893020 ATTCCTGGAACTATCAGTAAAGGT 57.107 37.500 12.11 0.00 0.00 3.50
110 111 7.338710 TGAATTCCTGGAACTATCAGTAAAGG 58.661 38.462 12.11 0.00 0.00 3.11
111 112 8.792830 TTGAATTCCTGGAACTATCAGTAAAG 57.207 34.615 12.11 0.00 0.00 1.85
114 115 9.832445 GTTATTGAATTCCTGGAACTATCAGTA 57.168 33.333 12.11 13.68 0.00 2.74
115 116 7.495934 CGTTATTGAATTCCTGGAACTATCAGT 59.504 37.037 12.11 14.57 0.00 3.41
116 117 7.041780 CCGTTATTGAATTCCTGGAACTATCAG 60.042 40.741 12.11 4.99 0.00 2.90
117 118 6.765989 CCGTTATTGAATTCCTGGAACTATCA 59.234 38.462 12.11 13.36 0.00 2.15
118 119 6.293462 GCCGTTATTGAATTCCTGGAACTATC 60.293 42.308 12.11 10.97 0.00 2.08
119 120 5.531287 GCCGTTATTGAATTCCTGGAACTAT 59.469 40.000 12.11 5.37 0.00 2.12
120 121 4.879545 GCCGTTATTGAATTCCTGGAACTA 59.120 41.667 12.11 0.00 0.00 2.24
121 122 3.694566 GCCGTTATTGAATTCCTGGAACT 59.305 43.478 12.11 0.00 0.00 3.01
122 123 3.442273 TGCCGTTATTGAATTCCTGGAAC 59.558 43.478 12.11 0.27 0.00 3.62
123 124 3.691575 TGCCGTTATTGAATTCCTGGAA 58.308 40.909 12.26 12.26 0.00 3.53
124 125 3.054728 TCTGCCGTTATTGAATTCCTGGA 60.055 43.478 2.27 0.00 0.00 3.86
125 126 3.278574 TCTGCCGTTATTGAATTCCTGG 58.721 45.455 2.27 0.00 0.00 4.45
126 127 4.963276 TTCTGCCGTTATTGAATTCCTG 57.037 40.909 2.27 0.00 0.00 3.86
127 128 4.764823 TGTTTCTGCCGTTATTGAATTCCT 59.235 37.500 2.27 0.00 0.00 3.36
128 129 5.054390 TGTTTCTGCCGTTATTGAATTCC 57.946 39.130 2.27 0.00 0.00 3.01
129 130 6.419413 TGTTTGTTTCTGCCGTTATTGAATTC 59.581 34.615 0.00 0.00 0.00 2.17
130 131 6.276847 TGTTTGTTTCTGCCGTTATTGAATT 58.723 32.000 0.00 0.00 0.00 2.17
131 132 5.837437 TGTTTGTTTCTGCCGTTATTGAAT 58.163 33.333 0.00 0.00 0.00 2.57
132 133 5.250235 TGTTTGTTTCTGCCGTTATTGAA 57.750 34.783 0.00 0.00 0.00 2.69
133 134 4.902443 TGTTTGTTTCTGCCGTTATTGA 57.098 36.364 0.00 0.00 0.00 2.57
134 135 5.957910 TTTGTTTGTTTCTGCCGTTATTG 57.042 34.783 0.00 0.00 0.00 1.90
137 138 9.562583 GAATATATTTGTTTGTTTCTGCCGTTA 57.437 29.630 0.00 0.00 0.00 3.18
138 139 8.303876 AGAATATATTTGTTTGTTTCTGCCGTT 58.696 29.630 0.00 0.00 0.00 4.44
139 140 7.826690 AGAATATATTTGTTTGTTTCTGCCGT 58.173 30.769 0.00 0.00 0.00 5.68
140 141 9.950680 ATAGAATATATTTGTTTGTTTCTGCCG 57.049 29.630 0.00 0.00 0.00 5.69
160 161 9.615660 TTGGGACAGGTGATACTTATATAGAAT 57.384 33.333 0.00 0.00 42.39 2.40
161 162 9.442062 TTTGGGACAGGTGATACTTATATAGAA 57.558 33.333 0.00 0.00 42.39 2.10
162 163 9.442062 TTTTGGGACAGGTGATACTTATATAGA 57.558 33.333 0.00 0.00 42.39 1.98
167 168 8.557450 ACTTATTTTGGGACAGGTGATACTTAT 58.443 33.333 0.00 0.00 42.39 1.73
168 169 7.924541 ACTTATTTTGGGACAGGTGATACTTA 58.075 34.615 0.00 0.00 42.39 2.24
169 170 6.790319 ACTTATTTTGGGACAGGTGATACTT 58.210 36.000 0.00 0.00 42.39 2.24
170 171 6.388619 ACTTATTTTGGGACAGGTGATACT 57.611 37.500 0.00 0.00 42.39 2.12
171 172 8.211629 AGATACTTATTTTGGGACAGGTGATAC 58.788 37.037 0.00 0.00 42.39 2.24
172 173 8.331931 AGATACTTATTTTGGGACAGGTGATA 57.668 34.615 0.00 0.00 42.39 2.15
173 174 7.092444 TGAGATACTTATTTTGGGACAGGTGAT 60.092 37.037 0.00 0.00 42.39 3.06
174 175 6.214615 TGAGATACTTATTTTGGGACAGGTGA 59.785 38.462 0.00 0.00 42.39 4.02
175 176 6.414732 TGAGATACTTATTTTGGGACAGGTG 58.585 40.000 0.00 0.00 42.39 4.00
176 177 6.636454 TGAGATACTTATTTTGGGACAGGT 57.364 37.500 0.00 0.00 42.39 4.00
177 178 7.611855 AGTTTGAGATACTTATTTTGGGACAGG 59.388 37.037 0.00 0.00 42.39 4.00
178 179 8.567285 AGTTTGAGATACTTATTTTGGGACAG 57.433 34.615 0.00 0.00 42.39 3.51
179 180 8.934023 AAGTTTGAGATACTTATTTTGGGACA 57.066 30.769 0.00 0.00 34.22 4.02
190 191 9.477484 CAGTGTTGTAGTAAGTTTGAGATACTT 57.523 33.333 0.00 0.00 39.13 2.24
191 192 8.639761 ACAGTGTTGTAGTAAGTTTGAGATACT 58.360 33.333 0.00 0.00 35.25 2.12
192 193 8.813643 ACAGTGTTGTAGTAAGTTTGAGATAC 57.186 34.615 0.00 0.00 35.25 2.24
194 195 9.998106 AATACAGTGTTGTAGTAAGTTTGAGAT 57.002 29.630 0.00 0.00 42.72 2.75
203 204 8.426569 ACTCCCTTAATACAGTGTTGTAGTAA 57.573 34.615 0.00 7.21 43.87 2.24
204 205 8.960591 GTACTCCCTTAATACAGTGTTGTAGTA 58.039 37.037 0.00 0.00 42.72 1.82
205 206 6.930068 ACTCCCTTAATACAGTGTTGTAGT 57.070 37.500 0.00 0.00 42.72 2.73
206 207 7.123847 AGGTACTCCCTTAATACAGTGTTGTAG 59.876 40.741 0.00 0.00 42.73 2.74
207 208 6.955851 AGGTACTCCCTTAATACAGTGTTGTA 59.044 38.462 0.00 0.00 42.73 2.41
208 209 5.783875 AGGTACTCCCTTAATACAGTGTTGT 59.216 40.000 0.00 0.00 42.73 3.32
209 210 6.295719 AGGTACTCCCTTAATACAGTGTTG 57.704 41.667 0.00 0.00 42.73 3.33
210 211 7.416731 TCTAGGTACTCCCTTAATACAGTGTT 58.583 38.462 0.00 0.00 42.73 3.32
211 212 6.978261 TCTAGGTACTCCCTTAATACAGTGT 58.022 40.000 0.00 0.00 42.73 3.55
212 213 7.560626 AGTTCTAGGTACTCCCTTAATACAGTG 59.439 40.741 0.00 0.00 42.73 3.66
213 214 7.650660 AGTTCTAGGTACTCCCTTAATACAGT 58.349 38.462 0.00 0.00 42.73 3.55
214 215 7.778853 TGAGTTCTAGGTACTCCCTTAATACAG 59.221 40.741 17.72 0.00 42.73 2.74
215 216 7.645942 TGAGTTCTAGGTACTCCCTTAATACA 58.354 38.462 17.72 1.13 42.73 2.29
216 217 8.709272 ATGAGTTCTAGGTACTCCCTTAATAC 57.291 38.462 17.72 0.00 42.73 1.89
217 218 8.734763 AGATGAGTTCTAGGTACTCCCTTAATA 58.265 37.037 17.72 4.06 42.73 0.98
218 219 7.597327 AGATGAGTTCTAGGTACTCCCTTAAT 58.403 38.462 17.72 8.48 42.73 1.40
219 220 6.982899 AGATGAGTTCTAGGTACTCCCTTAA 58.017 40.000 17.72 5.09 42.73 1.85
220 221 6.593759 AGATGAGTTCTAGGTACTCCCTTA 57.406 41.667 17.72 5.36 42.73 2.69
221 222 5.475398 AGATGAGTTCTAGGTACTCCCTT 57.525 43.478 17.72 7.62 42.73 3.95
222 223 7.475654 CATCTAGATGAGTTCTAGGTACTCCCT 60.476 44.444 25.78 16.34 44.99 4.20
223 224 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
224 225 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
255 256 9.393512 TGTTTTCAAAATGAATGAGACCAAATT 57.606 25.926 0.00 0.00 36.11 1.82
256 257 8.961294 TGTTTTCAAAATGAATGAGACCAAAT 57.039 26.923 0.00 0.00 36.11 2.32
257 258 8.783833 TTGTTTTCAAAATGAATGAGACCAAA 57.216 26.923 0.00 0.00 36.11 3.28
258 259 8.256605 TCTTGTTTTCAAAATGAATGAGACCAA 58.743 29.630 0.00 0.00 39.47 3.67
259 260 7.780064 TCTTGTTTTCAAAATGAATGAGACCA 58.220 30.769 0.00 0.00 39.47 4.02
260 261 8.542953 GTTCTTGTTTTCAAAATGAATGAGACC 58.457 33.333 0.00 0.00 39.47 3.85
261 262 9.086336 TGTTCTTGTTTTCAAAATGAATGAGAC 57.914 29.630 0.00 0.00 39.47 3.36
262 263 9.304731 CTGTTCTTGTTTTCAAAATGAATGAGA 57.695 29.630 0.00 0.00 39.47 3.27
263 264 9.304731 TCTGTTCTTGTTTTCAAAATGAATGAG 57.695 29.630 0.00 0.00 39.47 2.90
264 265 9.820725 ATCTGTTCTTGTTTTCAAAATGAATGA 57.179 25.926 0.00 0.00 39.47 2.57
270 271 9.313118 GGTTGTATCTGTTCTTGTTTTCAAAAT 57.687 29.630 0.00 0.00 39.47 1.82
271 272 7.762159 GGGTTGTATCTGTTCTTGTTTTCAAAA 59.238 33.333 0.00 0.00 39.47 2.44
272 273 7.093727 TGGGTTGTATCTGTTCTTGTTTTCAAA 60.094 33.333 0.00 0.00 39.47 2.69
273 274 6.378564 TGGGTTGTATCTGTTCTTGTTTTCAA 59.621 34.615 0.00 0.00 38.21 2.69
274 275 5.888724 TGGGTTGTATCTGTTCTTGTTTTCA 59.111 36.000 0.00 0.00 0.00 2.69
275 276 6.206498 GTGGGTTGTATCTGTTCTTGTTTTC 58.794 40.000 0.00 0.00 0.00 2.29
276 277 5.220970 CGTGGGTTGTATCTGTTCTTGTTTT 60.221 40.000 0.00 0.00 0.00 2.43
277 278 4.274950 CGTGGGTTGTATCTGTTCTTGTTT 59.725 41.667 0.00 0.00 0.00 2.83
278 279 3.813166 CGTGGGTTGTATCTGTTCTTGTT 59.187 43.478 0.00 0.00 0.00 2.83
279 280 3.181458 ACGTGGGTTGTATCTGTTCTTGT 60.181 43.478 0.00 0.00 0.00 3.16
280 281 3.399330 ACGTGGGTTGTATCTGTTCTTG 58.601 45.455 0.00 0.00 0.00 3.02
281 282 3.070446 TGACGTGGGTTGTATCTGTTCTT 59.930 43.478 0.00 0.00 0.00 2.52
282 283 2.631062 TGACGTGGGTTGTATCTGTTCT 59.369 45.455 0.00 0.00 0.00 3.01
283 284 2.993899 CTGACGTGGGTTGTATCTGTTC 59.006 50.000 0.00 0.00 0.00 3.18
284 285 2.870435 GCTGACGTGGGTTGTATCTGTT 60.870 50.000 0.00 0.00 0.00 3.16
285 286 1.337823 GCTGACGTGGGTTGTATCTGT 60.338 52.381 0.00 0.00 0.00 3.41
286 287 1.337728 TGCTGACGTGGGTTGTATCTG 60.338 52.381 0.00 0.00 0.00 2.90
287 288 0.973632 TGCTGACGTGGGTTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
288 289 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
289 290 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
290 291 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
291 292 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
292 293 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
293 294 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
294 295 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
295 296 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
296 297 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
297 298 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
298 299 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
299 300 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
300 301 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
301 302 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
302 303 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
303 304 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
304 305 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
305 306 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
306 307 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
307 308 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
308 309 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
309 310 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
310 311 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
311 312 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
312 313 6.552629 CATTGGATGTGATGCTATAAGATGC 58.447 40.000 0.00 0.00 0.00 3.91
313 314 6.404403 GGCATTGGATGTGATGCTATAAGATG 60.404 42.308 8.06 0.00 46.01 2.90
314 315 5.651139 GGCATTGGATGTGATGCTATAAGAT 59.349 40.000 8.06 0.00 46.01 2.40
315 316 5.005740 GGCATTGGATGTGATGCTATAAGA 58.994 41.667 8.06 0.00 46.01 2.10
316 317 5.008331 AGGCATTGGATGTGATGCTATAAG 58.992 41.667 8.06 0.00 46.01 1.73
317 318 4.989277 AGGCATTGGATGTGATGCTATAA 58.011 39.130 8.06 0.00 46.01 0.98
318 319 4.645863 AGGCATTGGATGTGATGCTATA 57.354 40.909 8.06 0.00 46.01 1.31
319 320 3.520691 AGGCATTGGATGTGATGCTAT 57.479 42.857 8.06 0.00 46.01 2.97
320 321 4.645863 ATAGGCATTGGATGTGATGCTA 57.354 40.909 8.06 0.76 46.01 3.49
321 322 3.520691 ATAGGCATTGGATGTGATGCT 57.479 42.857 8.06 0.00 46.01 3.79
322 323 5.710513 TTTATAGGCATTGGATGTGATGC 57.289 39.130 0.00 0.00 46.03 3.91
323 324 7.514784 TCTTTTATAGGCATTGGATGTGATG 57.485 36.000 0.00 0.00 0.00 3.07
324 325 7.946219 TCATCTTTTATAGGCATTGGATGTGAT 59.054 33.333 0.00 0.00 33.39 3.06
325 326 7.289310 TCATCTTTTATAGGCATTGGATGTGA 58.711 34.615 0.00 0.00 33.39 3.58
326 327 7.514784 TCATCTTTTATAGGCATTGGATGTG 57.485 36.000 0.00 0.00 33.39 3.21
327 328 8.582437 CATTCATCTTTTATAGGCATTGGATGT 58.418 33.333 0.00 0.00 33.39 3.06
328 329 8.799367 TCATTCATCTTTTATAGGCATTGGATG 58.201 33.333 0.00 0.00 0.00 3.51
329 330 8.945195 TCATTCATCTTTTATAGGCATTGGAT 57.055 30.769 0.00 0.00 0.00 3.41
330 331 8.219868 TCTCATTCATCTTTTATAGGCATTGGA 58.780 33.333 0.00 0.00 0.00 3.53
331 332 8.295288 GTCTCATTCATCTTTTATAGGCATTGG 58.705 37.037 0.00 0.00 0.00 3.16
332 333 8.295288 GGTCTCATTCATCTTTTATAGGCATTG 58.705 37.037 0.00 0.00 0.00 2.82
333 334 8.000709 TGGTCTCATTCATCTTTTATAGGCATT 58.999 33.333 0.00 0.00 0.00 3.56
334 335 7.520798 TGGTCTCATTCATCTTTTATAGGCAT 58.479 34.615 0.00 0.00 0.00 4.40
335 336 6.899089 TGGTCTCATTCATCTTTTATAGGCA 58.101 36.000 0.00 0.00 0.00 4.75
336 337 7.807977 TTGGTCTCATTCATCTTTTATAGGC 57.192 36.000 0.00 0.00 0.00 3.93
414 415 8.557029 CCGTCTCAAAATAAGTGTCTTAACTTT 58.443 33.333 0.00 0.00 40.77 2.66
415 416 7.172703 CCCGTCTCAAAATAAGTGTCTTAACTT 59.827 37.037 0.00 0.00 42.89 2.66
416 417 6.649557 CCCGTCTCAAAATAAGTGTCTTAACT 59.350 38.462 0.00 0.00 0.00 2.24
417 418 6.128363 CCCCGTCTCAAAATAAGTGTCTTAAC 60.128 42.308 0.00 0.00 0.00 2.01
418 419 5.935789 CCCCGTCTCAAAATAAGTGTCTTAA 59.064 40.000 0.00 0.00 0.00 1.85
419 420 5.246656 TCCCCGTCTCAAAATAAGTGTCTTA 59.753 40.000 0.00 0.00 0.00 2.10
420 421 4.041198 TCCCCGTCTCAAAATAAGTGTCTT 59.959 41.667 0.00 0.00 0.00 3.01
421 422 3.581332 TCCCCGTCTCAAAATAAGTGTCT 59.419 43.478 0.00 0.00 0.00 3.41
422 423 3.933332 CTCCCCGTCTCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
423 424 3.326880 ACTCCCCGTCTCAAAATAAGTGT 59.673 43.478 0.00 0.00 0.00 3.55
424 425 3.939066 ACTCCCCGTCTCAAAATAAGTG 58.061 45.455 0.00 0.00 0.00 3.16
425 426 5.952347 ATACTCCCCGTCTCAAAATAAGT 57.048 39.130 0.00 0.00 0.00 2.24
426 427 7.667557 TCATATACTCCCCGTCTCAAAATAAG 58.332 38.462 0.00 0.00 0.00 1.73
427 428 7.606135 TCATATACTCCCCGTCTCAAAATAA 57.394 36.000 0.00 0.00 0.00 1.40
428 429 7.792364 ATCATATACTCCCCGTCTCAAAATA 57.208 36.000 0.00 0.00 0.00 1.40
429 430 6.688073 ATCATATACTCCCCGTCTCAAAAT 57.312 37.500 0.00 0.00 0.00 1.82
430 431 7.256190 CCTTATCATATACTCCCCGTCTCAAAA 60.256 40.741 0.00 0.00 0.00 2.44
431 432 6.210784 CCTTATCATATACTCCCCGTCTCAAA 59.789 42.308 0.00 0.00 0.00 2.69
432 433 5.715279 CCTTATCATATACTCCCCGTCTCAA 59.285 44.000 0.00 0.00 0.00 3.02
433 434 5.014860 TCCTTATCATATACTCCCCGTCTCA 59.985 44.000 0.00 0.00 0.00 3.27
434 435 5.507637 TCCTTATCATATACTCCCCGTCTC 58.492 45.833 0.00 0.00 0.00 3.36
435 436 5.531753 TCCTTATCATATACTCCCCGTCT 57.468 43.478 0.00 0.00 0.00 4.18
436 437 7.039644 CCATATCCTTATCATATACTCCCCGTC 60.040 44.444 0.00 0.00 0.00 4.79
437 438 6.782988 CCATATCCTTATCATATACTCCCCGT 59.217 42.308 0.00 0.00 0.00 5.28
438 439 6.295349 GCCATATCCTTATCATATACTCCCCG 60.295 46.154 0.00 0.00 0.00 5.73
439 440 6.013293 GGCCATATCCTTATCATATACTCCCC 60.013 46.154 0.00 0.00 0.00 4.81
440 441 6.789959 AGGCCATATCCTTATCATATACTCCC 59.210 42.308 5.01 0.00 30.82 4.30
441 442 7.732593 AGAGGCCATATCCTTATCATATACTCC 59.267 40.741 5.01 0.00 36.38 3.85
442 443 8.719645 AGAGGCCATATCCTTATCATATACTC 57.280 38.462 5.01 0.00 36.38 2.59
443 444 9.512748 AAAGAGGCCATATCCTTATCATATACT 57.487 33.333 5.01 0.00 36.38 2.12
444 445 9.771534 GAAAGAGGCCATATCCTTATCATATAC 57.228 37.037 5.01 0.00 36.38 1.47
445 446 8.642432 CGAAAGAGGCCATATCCTTATCATATA 58.358 37.037 5.01 0.00 36.38 0.86
446 447 7.345653 TCGAAAGAGGCCATATCCTTATCATAT 59.654 37.037 5.01 0.00 36.38 1.78
447 448 6.667848 TCGAAAGAGGCCATATCCTTATCATA 59.332 38.462 5.01 0.00 36.38 2.15
448 449 5.485353 TCGAAAGAGGCCATATCCTTATCAT 59.515 40.000 5.01 0.00 36.38 2.45
449 450 4.838423 TCGAAAGAGGCCATATCCTTATCA 59.162 41.667 5.01 0.00 36.38 2.15
450 451 5.407407 TCGAAAGAGGCCATATCCTTATC 57.593 43.478 5.01 0.00 36.38 1.75
461 462 5.609104 AGCTGAGCTTATCGAAAGAGGCC 62.609 52.174 0.00 0.00 38.99 5.19
462 463 2.482839 AGCTGAGCTTATCGAAAGAGGC 60.483 50.000 0.00 2.30 38.99 4.70
602 606 0.994247 TGGTCCAAGGCATCAGTGAT 59.006 50.000 0.00 0.00 0.00 3.06
658 663 9.355215 CAATATCGTATTAGTGGTTGATACTCC 57.645 37.037 0.00 0.00 0.00 3.85
693 741 9.538508 CTGAATCACTATACTGAATCATTGACA 57.461 33.333 1.94 0.00 31.19 3.58
694 742 9.539825 ACTGAATCACTATACTGAATCATTGAC 57.460 33.333 1.94 0.00 31.19 3.18
700 748 9.497030 CGCTATACTGAATCACTATACTGAATC 57.503 37.037 0.00 0.00 0.00 2.52
701 749 7.971168 GCGCTATACTGAATCACTATACTGAAT 59.029 37.037 0.00 0.00 0.00 2.57
702 750 7.040686 TGCGCTATACTGAATCACTATACTGAA 60.041 37.037 9.73 0.00 0.00 3.02
703 751 6.430000 TGCGCTATACTGAATCACTATACTGA 59.570 38.462 9.73 0.00 0.00 3.41
704 752 6.612306 TGCGCTATACTGAATCACTATACTG 58.388 40.000 9.73 0.00 0.00 2.74
705 753 6.819397 TGCGCTATACTGAATCACTATACT 57.181 37.500 9.73 0.00 0.00 2.12
706 754 6.020281 GCATGCGCTATACTGAATCACTATAC 60.020 42.308 9.73 0.00 34.30 1.47
707 755 6.036470 GCATGCGCTATACTGAATCACTATA 58.964 40.000 9.73 0.00 34.30 1.31
708 756 4.867047 GCATGCGCTATACTGAATCACTAT 59.133 41.667 9.73 0.00 34.30 2.12
709 757 4.237724 GCATGCGCTATACTGAATCACTA 58.762 43.478 9.73 0.00 34.30 2.74
710 758 3.062763 GCATGCGCTATACTGAATCACT 58.937 45.455 9.73 0.00 34.30 3.41
711 759 2.802247 TGCATGCGCTATACTGAATCAC 59.198 45.455 14.09 0.00 39.64 3.06
910 967 4.541705 AGCTAGCTACTCCAGAAGATTGA 58.458 43.478 17.69 0.00 0.00 2.57
943 1005 5.923733 AGCTAGCTTTGACAGTACACTAT 57.076 39.130 12.68 0.00 0.00 2.12
944 1006 5.470368 CAAGCTAGCTTTGACAGTACACTA 58.530 41.667 27.34 0.00 33.42 2.74
945 1007 4.310769 CAAGCTAGCTTTGACAGTACACT 58.689 43.478 27.34 0.00 33.42 3.55
946 1008 3.433615 CCAAGCTAGCTTTGACAGTACAC 59.566 47.826 27.34 0.00 33.42 2.90
966 1029 1.550524 CAAACTCTCACGGGATCTCCA 59.449 52.381 0.00 0.00 37.91 3.86
973 1036 0.588252 CTTGCACAAACTCTCACGGG 59.412 55.000 0.00 0.00 0.00 5.28
1026 1104 1.819288 TCGCTAGTCCTGGAACAAGAG 59.181 52.381 0.00 0.00 38.70 2.85
1045 1123 5.049405 ACAAAATTGATCGGACTGAACACTC 60.049 40.000 0.00 0.00 0.00 3.51
1056 1135 5.740569 CAGAACTATGCACAAAATTGATCGG 59.259 40.000 0.00 0.00 0.00 4.18
1057 1136 6.545508 TCAGAACTATGCACAAAATTGATCG 58.454 36.000 0.00 0.00 0.00 3.69
1074 1153 8.078596 GCAACAGATACAAGAAAATTCAGAACT 58.921 33.333 0.00 0.00 0.00 3.01
1309 1492 1.000607 CCGTCCTTCTTCTTGTCGTCA 60.001 52.381 0.00 0.00 0.00 4.35
1358 1541 0.680280 TAGCCGTCCTTCTTCTCGCT 60.680 55.000 0.00 0.00 0.00 4.93
1402 1585 1.807573 GCCGTCCTTCTTCTCGCTG 60.808 63.158 0.00 0.00 0.00 5.18
1403 1586 0.680280 TAGCCGTCCTTCTTCTCGCT 60.680 55.000 0.00 0.00 0.00 4.93
1404 1587 0.525882 GTAGCCGTCCTTCTTCTCGC 60.526 60.000 0.00 0.00 0.00 5.03
1405 1588 0.248134 CGTAGCCGTCCTTCTTCTCG 60.248 60.000 0.00 0.00 0.00 4.04
1406 1589 0.100861 CCGTAGCCGTCCTTCTTCTC 59.899 60.000 0.00 0.00 0.00 2.87
1407 1590 1.946475 GCCGTAGCCGTCCTTCTTCT 61.946 60.000 0.00 0.00 0.00 2.85
1408 1591 1.518792 GCCGTAGCCGTCCTTCTTC 60.519 63.158 0.00 0.00 0.00 2.87
1409 1592 2.577593 GCCGTAGCCGTCCTTCTT 59.422 61.111 0.00 0.00 0.00 2.52
1410 1593 3.823330 CGCCGTAGCCGTCCTTCT 61.823 66.667 0.00 0.00 34.57 2.85
1425 1608 2.661866 CGTACCCATAGGCTGCGC 60.662 66.667 0.00 0.00 36.11 6.09
1426 1609 2.029073 CCGTACCCATAGGCTGCG 59.971 66.667 0.00 0.00 36.11 5.18
1427 1610 2.280865 GCCGTACCCATAGGCTGC 60.281 66.667 0.00 0.00 46.83 5.25
1430 1613 4.982749 GCCGCCGTACCCATAGGC 62.983 72.222 0.00 0.00 46.88 3.93
1431 1614 4.657824 CGCCGCCGTACCCATAGG 62.658 72.222 0.00 0.00 40.04 2.57
1432 1615 4.657824 CCGCCGCCGTACCCATAG 62.658 72.222 0.00 0.00 0.00 2.23
1443 1626 4.796231 TCTTCTTCTCGCCGCCGC 62.796 66.667 0.00 0.00 0.00 6.53
1590 1782 2.011741 CTGCTGATACGCGGGGTACA 62.012 60.000 12.47 7.09 32.95 2.90
1622 1814 0.179127 GAGTAAACCGGGTAGGACGC 60.179 60.000 6.32 0.00 45.00 5.19
1642 1834 1.045911 CAGGAGGAGCAGGGTAGGAC 61.046 65.000 0.00 0.00 0.00 3.85
1708 1900 9.307121 ACAAGTATACTACAGTAGTACAGTACG 57.693 37.037 20.68 10.81 43.46 3.67
1730 1927 9.751542 ACGTATCATCTCTCCTTAATTAACAAG 57.248 33.333 0.00 0.00 0.00 3.16
1771 1974 2.260434 GGACACCGCTCGCAACTA 59.740 61.111 0.00 0.00 0.00 2.24
1787 1990 2.902705 CCATCAAAATCATGGCCTGG 57.097 50.000 3.32 0.00 34.59 4.45
1823 2026 0.953727 CATCTCTCTGCTCTCTCCGG 59.046 60.000 0.00 0.00 0.00 5.14
1892 2110 1.894466 CCATTGCTGATCCAACCAACA 59.106 47.619 0.00 0.00 0.00 3.33
1920 2138 4.000988 GTGTACAATCTGTTACCACCCTG 58.999 47.826 0.00 0.00 0.00 4.45
1923 2141 3.916761 TCGTGTACAATCTGTTACCACC 58.083 45.455 0.00 0.00 0.00 4.61
1942 2160 7.377766 TGAGTTTCCTTTTATTCATTCCTCG 57.622 36.000 0.00 0.00 0.00 4.63
2019 2237 1.390123 CTGAACTAACCGTGCACGATG 59.610 52.381 39.10 25.53 43.02 3.84
2024 2242 1.873698 GTTCCTGAACTAACCGTGCA 58.126 50.000 2.80 0.00 38.25 4.57
2041 2259 8.556213 AGCAAATAAATGATTTTGATGCAGTT 57.444 26.923 17.52 0.00 35.45 3.16
2061 2279 3.572255 AGCCTGTCCGAAAAATAAGCAAA 59.428 39.130 0.00 0.00 0.00 3.68
2063 2281 2.790433 AGCCTGTCCGAAAAATAAGCA 58.210 42.857 0.00 0.00 0.00 3.91
2064 2282 3.727970 CGAAGCCTGTCCGAAAAATAAGC 60.728 47.826 0.00 0.00 0.00 3.09
2065 2283 4.003519 CGAAGCCTGTCCGAAAAATAAG 57.996 45.455 0.00 0.00 0.00 1.73
2082 2300 9.661563 TTTTATATATGTATTAGTGGGGCGAAG 57.338 33.333 0.00 0.00 0.00 3.79
2083 2301 9.439500 GTTTTATATATGTATTAGTGGGGCGAA 57.561 33.333 0.00 0.00 0.00 4.70
2084 2302 8.595421 TGTTTTATATATGTATTAGTGGGGCGA 58.405 33.333 0.00 0.00 0.00 5.54
2085 2303 8.780846 TGTTTTATATATGTATTAGTGGGGCG 57.219 34.615 0.00 0.00 0.00 6.13
2111 2329 9.180678 GCGTATTTTATTATGTTGCTGCTTATT 57.819 29.630 0.00 0.00 0.00 1.40
2112 2330 7.533900 CGCGTATTTTATTATGTTGCTGCTTAT 59.466 33.333 0.00 0.00 0.00 1.73
2114 2332 5.681105 CGCGTATTTTATTATGTTGCTGCTT 59.319 36.000 0.00 0.00 0.00 3.91
2115 2333 5.204833 CGCGTATTTTATTATGTTGCTGCT 58.795 37.500 0.00 0.00 0.00 4.24
2116 2334 4.967575 ACGCGTATTTTATTATGTTGCTGC 59.032 37.500 11.67 0.00 0.00 5.25
2117 2335 5.619607 GGACGCGTATTTTATTATGTTGCTG 59.380 40.000 13.97 0.00 0.00 4.41
2118 2336 5.277634 GGGACGCGTATTTTATTATGTTGCT 60.278 40.000 13.97 0.00 0.00 3.91
2119 2337 4.907582 GGGACGCGTATTTTATTATGTTGC 59.092 41.667 13.97 0.00 0.00 4.17
2120 2338 6.050454 TGGGACGCGTATTTTATTATGTTG 57.950 37.500 13.97 0.00 0.00 3.33
2121 2339 6.093771 TGTTGGGACGCGTATTTTATTATGTT 59.906 34.615 13.97 0.00 0.00 2.71
2123 2341 6.050454 TGTTGGGACGCGTATTTTATTATG 57.950 37.500 13.97 0.00 0.00 1.90
2124 2342 6.680874 TTGTTGGGACGCGTATTTTATTAT 57.319 33.333 13.97 0.00 0.00 1.28
2125 2343 6.680874 ATTGTTGGGACGCGTATTTTATTA 57.319 33.333 13.97 0.00 0.00 0.98
2126 2344 5.570234 ATTGTTGGGACGCGTATTTTATT 57.430 34.783 13.97 0.00 0.00 1.40
2128 2346 4.934001 TGTATTGTTGGGACGCGTATTTTA 59.066 37.500 13.97 0.00 0.00 1.52
2130 2348 3.336468 TGTATTGTTGGGACGCGTATTT 58.664 40.909 13.97 0.00 0.00 1.40
2132 2350 2.676632 TGTATTGTTGGGACGCGTAT 57.323 45.000 13.97 1.98 0.00 3.06
2133 2351 2.452295 TTGTATTGTTGGGACGCGTA 57.548 45.000 13.97 0.00 0.00 4.42
2135 2353 5.856126 ATATATTGTATTGTTGGGACGCG 57.144 39.130 3.53 3.53 0.00 6.01
2145 2363 9.424319 GCCTCCCGTCATATATATATTGTATTG 57.576 37.037 2.28 0.00 0.00 1.90
2146 2364 8.594550 GGCCTCCCGTCATATATATATTGTATT 58.405 37.037 2.28 0.00 0.00 1.89
2148 2366 6.495872 GGGCCTCCCGTCATATATATATTGTA 59.504 42.308 0.84 0.00 32.13 2.41
2149 2367 5.307196 GGGCCTCCCGTCATATATATATTGT 59.693 44.000 0.84 0.00 32.13 2.71
2164 2382 3.999915 TGTTTAGTAACTGGGCCTCCCG 62.000 54.545 4.53 0.00 38.14 5.14
2165 2383 1.631898 TGTTTAGTAACTGGGCCTCCC 59.368 52.381 4.53 0.00 36.86 4.30
2166 2384 2.570302 TCTGTTTAGTAACTGGGCCTCC 59.430 50.000 4.53 0.00 34.87 4.30
2197 2581 8.726988 TGTTAGGCATGTTCTAGTTTTATGTTC 58.273 33.333 0.00 0.00 0.00 3.18
2203 2587 5.631119 AGGTGTTAGGCATGTTCTAGTTTT 58.369 37.500 0.00 0.00 0.00 2.43
2215 2599 0.988832 CCTGGGTTAGGTGTTAGGCA 59.011 55.000 0.00 0.00 42.00 4.75
2228 2643 1.152030 TCTTCAGTCAGGCCTGGGT 60.152 57.895 32.23 17.09 33.14 4.51
2231 2646 0.321122 GGTGTCTTCAGTCAGGCCTG 60.321 60.000 27.87 27.87 0.00 4.85
2237 2652 1.754745 GGCCAGGTGTCTTCAGTCA 59.245 57.895 0.00 0.00 0.00 3.41
2242 2657 2.034221 GTGGGGCCAGGTGTCTTC 59.966 66.667 4.39 0.00 0.00 2.87
2272 2687 0.314302 CTTCGTGTCGTCACCCTCTT 59.686 55.000 7.21 0.00 41.09 2.85
2297 2712 6.570692 TCTAATCTTTTAGACTTGGTAGCGG 58.429 40.000 0.00 0.00 39.09 5.52
2310 2725 5.941647 CCGGGGTGAAAAGTCTAATCTTTTA 59.058 40.000 0.00 0.00 44.36 1.52
2322 2737 0.107654 CTAGGCTCCGGGGTGAAAAG 60.108 60.000 1.62 0.00 0.00 2.27
2333 2748 2.087646 CTTTTCCTTGTGCTAGGCTCC 58.912 52.381 0.00 0.00 35.15 4.70
2350 2765 2.388232 GGCGCCGTCGTGAATCTTT 61.388 57.895 12.58 0.00 38.14 2.52
2356 2771 4.717629 CTGAAGGCGCCGTCGTGA 62.718 66.667 32.29 17.58 38.14 4.35
2360 2775 2.815647 CTTCCTGAAGGCGCCGTC 60.816 66.667 32.12 32.12 34.87 4.79
2363 2778 2.672996 TTGCTTCCTGAAGGCGCC 60.673 61.111 21.89 21.89 38.80 6.53
2364 2779 2.873288 CTTGCTTCCTGAAGGCGC 59.127 61.111 0.00 0.00 38.80 6.53
2366 2781 0.038801 GTTGCTTGCTTCCTGAAGGC 60.039 55.000 8.85 4.70 38.80 4.35
2367 2782 1.321474 TGTTGCTTGCTTCCTGAAGG 58.679 50.000 8.85 0.00 38.80 3.46
2371 2786 3.126514 CAGTAGATGTTGCTTGCTTCCTG 59.873 47.826 0.00 0.00 0.00 3.86
2387 2802 3.554129 CCGGTGACAACAACATCAGTAGA 60.554 47.826 0.00 0.00 32.53 2.59
2391 2806 0.238289 GCCGGTGACAACAACATCAG 59.762 55.000 1.90 0.00 32.53 2.90
2392 2807 1.502990 CGCCGGTGACAACAACATCA 61.503 55.000 10.20 0.00 32.53 3.07
2394 2809 2.903547 GCGCCGGTGACAACAACAT 61.904 57.895 21.76 0.00 32.53 2.71
2395 2810 3.578272 GCGCCGGTGACAACAACA 61.578 61.111 21.76 0.00 32.53 3.33
2397 2812 4.858680 TGGCGCCGGTGACAACAA 62.859 61.111 24.37 0.00 0.00 2.83
2399 2814 4.980805 TCTGGCGCCGGTGACAAC 62.981 66.667 33.59 8.69 0.00 3.32
2400 2815 3.758973 TTTCTGGCGCCGGTGACAA 62.759 57.895 33.59 18.59 0.00 3.18
2401 2816 4.243008 TTTCTGGCGCCGGTGACA 62.243 61.111 33.59 24.92 0.00 3.58
2531 2946 1.827399 AAGTGTGTAGTGGCGGGAGG 61.827 60.000 0.00 0.00 0.00 4.30
2552 2968 1.604604 CTTTTGGTCGTGTGGGTGAT 58.395 50.000 0.00 0.00 0.00 3.06
2586 3197 2.184579 GACAGGCTCCGTGGTAGC 59.815 66.667 0.00 0.00 39.33 3.58
2588 3199 1.180456 TTTCGACAGGCTCCGTGGTA 61.180 55.000 5.84 0.00 0.00 3.25
2592 3203 1.668151 GCTTTTCGACAGGCTCCGT 60.668 57.895 0.00 0.00 0.00 4.69
2597 3208 1.285950 GGTTGGCTTTTCGACAGGC 59.714 57.895 9.81 9.81 37.34 4.85
2599 3210 0.234884 GACGGTTGGCTTTTCGACAG 59.765 55.000 0.00 0.00 0.00 3.51
2602 3213 0.942410 CTCGACGGTTGGCTTTTCGA 60.942 55.000 0.00 0.00 37.20 3.71
2605 3216 2.258726 GGCTCGACGGTTGGCTTTT 61.259 57.895 0.00 0.00 0.00 2.27
2616 3227 1.817099 CTTGGATGGCAGGCTCGAC 60.817 63.158 0.00 0.00 0.00 4.20
2618 3229 1.817099 GTCTTGGATGGCAGGCTCG 60.817 63.158 0.00 0.00 0.00 5.03
2622 3233 1.379044 GGTGGTCTTGGATGGCAGG 60.379 63.158 0.00 0.00 0.00 4.85
2624 3235 2.350895 CGGTGGTCTTGGATGGCA 59.649 61.111 0.00 0.00 0.00 4.92
2625 3236 3.134127 GCGGTGGTCTTGGATGGC 61.134 66.667 0.00 0.00 0.00 4.40
2668 3279 0.035534 CCGTGATGTGGATGGTTGGA 60.036 55.000 0.00 0.00 0.00 3.53
2678 3289 3.353029 TTGCGTGGCCGTGATGTG 61.353 61.111 0.00 0.00 36.15 3.21
2685 3296 1.775039 CTATCATGGTTGCGTGGCCG 61.775 60.000 0.00 0.00 37.07 6.13
2687 3298 2.024918 CCTATCATGGTTGCGTGGC 58.975 57.895 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.