Multiple sequence alignment - TraesCS5B01G168100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G168100 chr5B 100.000 3239 0 0 1 3239 311962116 311958878 0.000000e+00 5982.0
1 TraesCS5B01G168100 chr3B 97.905 2768 52 4 475 3239 39640626 39637862 0.000000e+00 4785.0
2 TraesCS5B01G168100 chr3B 93.088 434 30 0 2806 3239 472656611 472657044 1.270000e-178 636.0
3 TraesCS5B01G168100 chr4B 99.167 2401 17 3 472 2869 238169287 238171687 0.000000e+00 4320.0
4 TraesCS5B01G168100 chr4B 99.262 2305 13 2 474 2775 312784959 312782656 0.000000e+00 4159.0
5 TraesCS5B01G168100 chr7A 98.958 2399 22 1 478 2873 473484341 473486739 0.000000e+00 4289.0
6 TraesCS5B01G168100 chr7A 99.000 2300 21 1 478 2775 533735222 533732923 0.000000e+00 4119.0
7 TraesCS5B01G168100 chr7A 92.034 477 38 0 1 477 184270993 184271469 0.000000e+00 671.0
8 TraesCS5B01G168100 chr7A 91.614 477 39 1 1 477 655334614 655334139 0.000000e+00 658.0
9 TraesCS5B01G168100 chr7A 92.971 441 31 0 2799 3239 533732565 533732125 0.000000e+00 643.0
10 TraesCS5B01G168100 chr7A 89.228 492 44 2 2757 3239 65081535 65082026 9.940000e-170 606.0
11 TraesCS5B01G168100 chr3A 98.836 2406 25 2 478 2880 444446559 444444154 0.000000e+00 4285.0
12 TraesCS5B01G168100 chr3A 92.952 454 31 1 2787 3239 444444346 444443893 0.000000e+00 660.0
13 TraesCS5B01G168100 chr3A 90.776 477 44 0 1 477 368932906 368933382 3.520000e-179 638.0
14 TraesCS5B01G168100 chr3A 86.042 480 62 2 2763 3238 63439794 63440272 8.020000e-141 510.0
15 TraesCS5B01G168100 chr2A 98.835 2403 25 2 474 2873 630239157 630236755 0.000000e+00 4279.0
16 TraesCS5B01G168100 chr1A 98.012 2414 46 1 478 2889 237744560 237742147 0.000000e+00 4191.0
17 TraesCS5B01G168100 chr1A 99.130 2300 18 2 477 2775 27319262 27321560 0.000000e+00 4135.0
18 TraesCS5B01G168100 chr1A 94.518 456 25 0 2784 3239 394244067 394244522 0.000000e+00 704.0
19 TraesCS5B01G168100 chr1A 91.614 477 40 0 1 477 400017201 400016725 0.000000e+00 660.0
20 TraesCS5B01G168100 chr1A 92.135 267 20 1 2973 3239 517192581 517192846 3.050000e-100 375.0
21 TraesCS5B01G168100 chr1A 72.174 230 52 11 254 477 99788899 99788676 3.490000e-05 60.2
22 TraesCS5B01G168100 chr6A 94.549 477 26 0 1 477 23188181 23187705 0.000000e+00 737.0
23 TraesCS5B01G168100 chr6A 91.614 477 40 0 1 477 362212115 362212591 0.000000e+00 660.0
24 TraesCS5B01G168100 chr5A 91.632 478 38 2 1 477 645579055 645578579 0.000000e+00 660.0
25 TraesCS5B01G168100 chr5A 91.405 477 41 0 1 477 529055786 529055310 0.000000e+00 654.0
26 TraesCS5B01G168100 chr4D 92.135 267 19 2 2973 3239 54405923 54405659 3.050000e-100 375.0
27 TraesCS5B01G168100 chr5D 79.570 465 89 5 12 473 92888301 92887840 8.660000e-86 327.0
28 TraesCS5B01G168100 chr5D 76.238 101 24 0 377 477 255121843 255121743 2.000000e-03 54.7
29 TraesCS5B01G168100 chr7B 93.564 202 13 0 2781 2982 372339499 372339700 5.250000e-78 302.0
30 TraesCS5B01G168100 chr2B 88.889 162 17 1 2818 2978 57896173 57896334 7.090000e-47 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G168100 chr5B 311958878 311962116 3238 True 5982.0 5982 100.0000 1 3239 1 chr5B.!!$R1 3238
1 TraesCS5B01G168100 chr3B 39637862 39640626 2764 True 4785.0 4785 97.9050 475 3239 1 chr3B.!!$R1 2764
2 TraesCS5B01G168100 chr4B 238169287 238171687 2400 False 4320.0 4320 99.1670 472 2869 1 chr4B.!!$F1 2397
3 TraesCS5B01G168100 chr4B 312782656 312784959 2303 True 4159.0 4159 99.2620 474 2775 1 chr4B.!!$R1 2301
4 TraesCS5B01G168100 chr7A 473484341 473486739 2398 False 4289.0 4289 98.9580 478 2873 1 chr7A.!!$F3 2395
5 TraesCS5B01G168100 chr7A 533732125 533735222 3097 True 2381.0 4119 95.9855 478 3239 2 chr7A.!!$R2 2761
6 TraesCS5B01G168100 chr3A 444443893 444446559 2666 True 2472.5 4285 95.8940 478 3239 2 chr3A.!!$R1 2761
7 TraesCS5B01G168100 chr2A 630236755 630239157 2402 True 4279.0 4279 98.8350 474 2873 1 chr2A.!!$R1 2399
8 TraesCS5B01G168100 chr1A 237742147 237744560 2413 True 4191.0 4191 98.0120 478 2889 1 chr1A.!!$R2 2411
9 TraesCS5B01G168100 chr1A 27319262 27321560 2298 False 4135.0 4135 99.1300 477 2775 1 chr1A.!!$F1 2298

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.03563 CCTGAAGCTCCCACAGAAGG 60.036 60.0 10.34 0.0 34.07 3.46 F
454 455 0.03563 CCCTTTGCCTGTCCTCAGAG 60.036 60.0 0.00 0.0 43.76 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1164 1165 7.455953 TCCCACTATCAGCATAGAATTCATACT 59.544 37.037 8.44 0.0 36.25 2.12 R
2311 2316 8.621532 ACATACACAGACATAGTTCACAATTT 57.378 30.769 0.00 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.136323 ACAGAAAAATATCATTAACATCTCCCC 57.864 33.333 0.00 0.00 0.00 4.81
27 28 8.579863 CAGAAAAATATCATTAACATCTCCCCC 58.420 37.037 0.00 0.00 0.00 5.40
44 45 3.903530 CCCCCTGCCTTTTCCTATTAT 57.096 47.619 0.00 0.00 0.00 1.28
45 46 3.767711 CCCCCTGCCTTTTCCTATTATC 58.232 50.000 0.00 0.00 0.00 1.75
46 47 3.500471 CCCCCTGCCTTTTCCTATTATCC 60.500 52.174 0.00 0.00 0.00 2.59
47 48 3.140144 CCCCTGCCTTTTCCTATTATCCA 59.860 47.826 0.00 0.00 0.00 3.41
48 49 4.387437 CCCCTGCCTTTTCCTATTATCCAA 60.387 45.833 0.00 0.00 0.00 3.53
49 50 5.208121 CCCTGCCTTTTCCTATTATCCAAA 58.792 41.667 0.00 0.00 0.00 3.28
50 51 5.302823 CCCTGCCTTTTCCTATTATCCAAAG 59.697 44.000 0.00 0.00 0.00 2.77
51 52 6.129179 CCTGCCTTTTCCTATTATCCAAAGA 58.871 40.000 0.00 0.00 0.00 2.52
52 53 6.779539 CCTGCCTTTTCCTATTATCCAAAGAT 59.220 38.462 0.00 0.00 36.44 2.40
53 54 7.040132 CCTGCCTTTTCCTATTATCCAAAGATC 60.040 40.741 0.00 0.00 33.67 2.75
54 55 6.486657 TGCCTTTTCCTATTATCCAAAGATCG 59.513 38.462 0.00 0.00 33.67 3.69
55 56 6.072452 GCCTTTTCCTATTATCCAAAGATCGG 60.072 42.308 0.00 0.00 33.67 4.18
56 57 7.224297 CCTTTTCCTATTATCCAAAGATCGGA 58.776 38.462 0.00 0.00 36.84 4.55
57 58 7.885399 CCTTTTCCTATTATCCAAAGATCGGAT 59.115 37.037 5.99 5.99 45.41 4.18
58 59 9.944376 CTTTTCCTATTATCCAAAGATCGGATA 57.056 33.333 4.27 4.27 41.61 2.59
69 70 9.971922 ATCCAAAGATCGGATAAAATTGAAATC 57.028 29.630 0.00 0.00 41.61 2.17
70 71 9.189156 TCCAAAGATCGGATAAAATTGAAATCT 57.811 29.630 0.00 0.00 0.00 2.40
71 72 9.455847 CCAAAGATCGGATAAAATTGAAATCTC 57.544 33.333 0.00 0.00 0.00 2.75
72 73 9.455847 CAAAGATCGGATAAAATTGAAATCTCC 57.544 33.333 0.00 0.00 0.00 3.71
73 74 8.752005 AAGATCGGATAAAATTGAAATCTCCA 57.248 30.769 0.00 0.00 0.00 3.86
74 75 8.752005 AGATCGGATAAAATTGAAATCTCCAA 57.248 30.769 0.00 0.00 0.00 3.53
75 76 8.844244 AGATCGGATAAAATTGAAATCTCCAAG 58.156 33.333 0.00 0.00 0.00 3.61
76 77 6.795399 TCGGATAAAATTGAAATCTCCAAGC 58.205 36.000 0.00 0.00 0.00 4.01
77 78 6.376864 TCGGATAAAATTGAAATCTCCAAGCA 59.623 34.615 0.00 0.00 0.00 3.91
78 79 7.035004 CGGATAAAATTGAAATCTCCAAGCAA 58.965 34.615 0.00 0.00 0.00 3.91
79 80 7.221452 CGGATAAAATTGAAATCTCCAAGCAAG 59.779 37.037 0.00 0.00 0.00 4.01
80 81 8.253113 GGATAAAATTGAAATCTCCAAGCAAGA 58.747 33.333 0.00 0.00 0.00 3.02
81 82 9.298774 GATAAAATTGAAATCTCCAAGCAAGAG 57.701 33.333 0.00 0.00 0.00 2.85
82 83 4.715527 ATTGAAATCTCCAAGCAAGAGC 57.284 40.909 0.00 0.00 42.56 4.09
83 84 2.440409 TGAAATCTCCAAGCAAGAGCC 58.560 47.619 0.00 0.00 43.56 4.70
84 85 2.224843 TGAAATCTCCAAGCAAGAGCCA 60.225 45.455 0.00 0.00 43.56 4.75
85 86 2.125773 AATCTCCAAGCAAGAGCCAG 57.874 50.000 0.00 0.00 43.56 4.85
86 87 0.990374 ATCTCCAAGCAAGAGCCAGT 59.010 50.000 0.00 0.00 43.56 4.00
87 88 0.767375 TCTCCAAGCAAGAGCCAGTT 59.233 50.000 0.00 0.00 43.56 3.16
88 89 1.143684 TCTCCAAGCAAGAGCCAGTTT 59.856 47.619 0.00 0.00 43.56 2.66
89 90 1.959282 CTCCAAGCAAGAGCCAGTTTT 59.041 47.619 0.00 0.00 43.56 2.43
90 91 1.682854 TCCAAGCAAGAGCCAGTTTTG 59.317 47.619 0.00 0.00 43.56 2.44
91 92 1.682854 CCAAGCAAGAGCCAGTTTTGA 59.317 47.619 0.00 0.00 43.56 2.69
92 93 2.298163 CCAAGCAAGAGCCAGTTTTGAT 59.702 45.455 0.00 0.00 43.56 2.57
93 94 3.572584 CAAGCAAGAGCCAGTTTTGATC 58.427 45.455 0.00 0.00 43.56 2.92
94 95 3.151912 AGCAAGAGCCAGTTTTGATCT 57.848 42.857 0.00 0.00 43.56 2.75
95 96 4.292186 AGCAAGAGCCAGTTTTGATCTA 57.708 40.909 0.00 0.00 43.56 1.98
96 97 4.260170 AGCAAGAGCCAGTTTTGATCTAG 58.740 43.478 0.00 0.00 43.56 2.43
97 98 4.006319 GCAAGAGCCAGTTTTGATCTAGT 58.994 43.478 0.00 0.00 33.58 2.57
98 99 4.142730 GCAAGAGCCAGTTTTGATCTAGTG 60.143 45.833 0.00 0.00 33.58 2.74
99 100 4.213564 AGAGCCAGTTTTGATCTAGTGG 57.786 45.455 10.69 10.69 37.81 4.00
100 101 3.584848 AGAGCCAGTTTTGATCTAGTGGT 59.415 43.478 14.38 5.75 37.22 4.16
101 102 4.777896 AGAGCCAGTTTTGATCTAGTGGTA 59.222 41.667 14.38 0.00 37.22 3.25
102 103 5.426833 AGAGCCAGTTTTGATCTAGTGGTAT 59.573 40.000 14.38 7.26 37.22 2.73
103 104 6.611642 AGAGCCAGTTTTGATCTAGTGGTATA 59.388 38.462 14.38 0.00 37.22 1.47
104 105 6.821388 AGCCAGTTTTGATCTAGTGGTATAG 58.179 40.000 14.38 0.00 37.22 1.31
105 106 5.992217 GCCAGTTTTGATCTAGTGGTATAGG 59.008 44.000 14.38 0.00 37.22 2.57
106 107 6.525629 CCAGTTTTGATCTAGTGGTATAGGG 58.474 44.000 0.00 0.00 31.50 3.53
107 108 6.326583 CCAGTTTTGATCTAGTGGTATAGGGA 59.673 42.308 0.00 0.00 31.50 4.20
108 109 7.437748 CAGTTTTGATCTAGTGGTATAGGGAG 58.562 42.308 0.00 0.00 0.00 4.30
109 110 6.555360 AGTTTTGATCTAGTGGTATAGGGAGG 59.445 42.308 0.00 0.00 0.00 4.30
110 111 5.681494 TTGATCTAGTGGTATAGGGAGGT 57.319 43.478 0.00 0.00 0.00 3.85
111 112 4.999310 TGATCTAGTGGTATAGGGAGGTG 58.001 47.826 0.00 0.00 0.00 4.00
112 113 4.668335 TGATCTAGTGGTATAGGGAGGTGA 59.332 45.833 0.00 0.00 0.00 4.02
113 114 5.316183 TGATCTAGTGGTATAGGGAGGTGAT 59.684 44.000 0.00 0.00 0.00 3.06
114 115 6.507843 TGATCTAGTGGTATAGGGAGGTGATA 59.492 42.308 0.00 0.00 0.00 2.15
115 116 6.137104 TCTAGTGGTATAGGGAGGTGATAC 57.863 45.833 0.00 0.00 0.00 2.24
116 117 4.827036 AGTGGTATAGGGAGGTGATACA 57.173 45.455 0.00 0.00 0.00 2.29
117 118 5.152306 AGTGGTATAGGGAGGTGATACAA 57.848 43.478 0.00 0.00 0.00 2.41
118 119 4.900054 AGTGGTATAGGGAGGTGATACAAC 59.100 45.833 0.00 0.00 32.33 3.32
119 120 4.040095 GTGGTATAGGGAGGTGATACAACC 59.960 50.000 0.00 0.00 40.85 3.77
120 121 4.228824 GGTATAGGGAGGTGATACAACCA 58.771 47.826 0.00 0.00 43.20 3.67
121 122 4.844655 GGTATAGGGAGGTGATACAACCAT 59.155 45.833 0.00 0.00 43.20 3.55
122 123 5.309806 GGTATAGGGAGGTGATACAACCATT 59.690 44.000 0.00 0.00 43.20 3.16
123 124 3.652057 AGGGAGGTGATACAACCATTG 57.348 47.619 0.00 0.00 43.20 2.82
124 125 3.189606 AGGGAGGTGATACAACCATTGA 58.810 45.455 0.00 0.00 43.20 2.57
125 126 3.591527 AGGGAGGTGATACAACCATTGAA 59.408 43.478 0.00 0.00 43.20 2.69
126 127 3.694566 GGGAGGTGATACAACCATTGAAC 59.305 47.826 0.00 0.00 43.20 3.18
127 128 4.331968 GGAGGTGATACAACCATTGAACA 58.668 43.478 0.00 0.00 43.20 3.18
128 129 4.764823 GGAGGTGATACAACCATTGAACAA 59.235 41.667 0.00 0.00 43.20 2.83
129 130 5.242838 GGAGGTGATACAACCATTGAACAAA 59.757 40.000 0.00 0.00 43.20 2.83
130 131 6.239176 GGAGGTGATACAACCATTGAACAAAA 60.239 38.462 0.00 0.00 43.20 2.44
131 132 7.301868 AGGTGATACAACCATTGAACAAAAT 57.698 32.000 0.00 0.00 43.20 1.82
132 133 7.378181 AGGTGATACAACCATTGAACAAAATC 58.622 34.615 0.00 0.00 43.20 2.17
133 134 7.015098 AGGTGATACAACCATTGAACAAAATCA 59.985 33.333 0.00 0.00 43.20 2.57
134 135 7.818930 GGTGATACAACCATTGAACAAAATCAT 59.181 33.333 0.00 0.00 40.22 2.45
135 136 8.863049 GTGATACAACCATTGAACAAAATCATC 58.137 33.333 0.00 0.00 0.00 2.92
136 137 8.034215 TGATACAACCATTGAACAAAATCATCC 58.966 33.333 0.00 0.00 0.00 3.51
137 138 5.550290 ACAACCATTGAACAAAATCATCCC 58.450 37.500 0.00 0.00 0.00 3.85
138 139 5.307716 ACAACCATTGAACAAAATCATCCCT 59.692 36.000 0.00 0.00 0.00 4.20
139 140 6.183361 ACAACCATTGAACAAAATCATCCCTT 60.183 34.615 0.00 0.00 0.00 3.95
140 141 7.016072 ACAACCATTGAACAAAATCATCCCTTA 59.984 33.333 0.00 0.00 0.00 2.69
141 142 7.174107 ACCATTGAACAAAATCATCCCTTAG 57.826 36.000 0.00 0.00 0.00 2.18
142 143 6.725834 ACCATTGAACAAAATCATCCCTTAGT 59.274 34.615 0.00 0.00 0.00 2.24
143 144 7.037438 CCATTGAACAAAATCATCCCTTAGTG 58.963 38.462 0.00 0.00 0.00 2.74
144 145 6.588719 TTGAACAAAATCATCCCTTAGTGG 57.411 37.500 0.00 0.00 0.00 4.00
145 146 4.462483 TGAACAAAATCATCCCTTAGTGGC 59.538 41.667 0.00 0.00 0.00 5.01
146 147 3.365472 ACAAAATCATCCCTTAGTGGCC 58.635 45.455 0.00 0.00 0.00 5.36
147 148 2.695147 CAAAATCATCCCTTAGTGGCCC 59.305 50.000 0.00 0.00 0.00 5.80
148 149 1.912862 AATCATCCCTTAGTGGCCCT 58.087 50.000 0.00 0.00 0.00 5.19
149 150 1.912862 ATCATCCCTTAGTGGCCCTT 58.087 50.000 0.00 0.00 0.00 3.95
150 151 0.918983 TCATCCCTTAGTGGCCCTTG 59.081 55.000 0.00 0.00 0.00 3.61
151 152 0.106519 CATCCCTTAGTGGCCCTTGG 60.107 60.000 0.00 3.40 0.00 3.61
170 171 1.473258 GCATGGGCCATAAACAGACA 58.527 50.000 20.73 0.00 0.00 3.41
171 172 1.134946 GCATGGGCCATAAACAGACAC 59.865 52.381 20.73 0.00 0.00 3.67
172 173 1.750778 CATGGGCCATAAACAGACACC 59.249 52.381 20.73 0.00 0.00 4.16
173 174 0.774276 TGGGCCATAAACAGACACCA 59.226 50.000 0.00 0.00 0.00 4.17
174 175 1.357420 TGGGCCATAAACAGACACCAT 59.643 47.619 0.00 0.00 0.00 3.55
175 176 2.578480 TGGGCCATAAACAGACACCATA 59.422 45.455 0.00 0.00 0.00 2.74
176 177 3.214328 GGGCCATAAACAGACACCATAG 58.786 50.000 4.39 0.00 0.00 2.23
177 178 3.371595 GGGCCATAAACAGACACCATAGT 60.372 47.826 4.39 0.00 0.00 2.12
178 179 3.877508 GGCCATAAACAGACACCATAGTC 59.122 47.826 0.00 0.00 38.81 2.59
179 180 3.877508 GCCATAAACAGACACCATAGTCC 59.122 47.826 0.00 0.00 39.34 3.85
180 181 4.625324 GCCATAAACAGACACCATAGTCCA 60.625 45.833 0.00 0.00 39.34 4.02
181 182 5.496556 CCATAAACAGACACCATAGTCCAA 58.503 41.667 0.00 0.00 39.34 3.53
182 183 5.586243 CCATAAACAGACACCATAGTCCAAG 59.414 44.000 0.00 0.00 39.34 3.61
183 184 4.706842 AAACAGACACCATAGTCCAAGT 57.293 40.909 0.00 0.00 39.34 3.16
184 185 4.706842 AACAGACACCATAGTCCAAGTT 57.293 40.909 0.00 0.00 39.34 2.66
185 186 4.706842 ACAGACACCATAGTCCAAGTTT 57.293 40.909 0.00 0.00 39.34 2.66
186 187 4.642429 ACAGACACCATAGTCCAAGTTTC 58.358 43.478 0.00 0.00 39.34 2.78
187 188 4.102524 ACAGACACCATAGTCCAAGTTTCA 59.897 41.667 0.00 0.00 39.34 2.69
188 189 4.692625 CAGACACCATAGTCCAAGTTTCAG 59.307 45.833 0.00 0.00 39.34 3.02
189 190 4.593206 AGACACCATAGTCCAAGTTTCAGA 59.407 41.667 0.00 0.00 39.34 3.27
190 191 5.071788 AGACACCATAGTCCAAGTTTCAGAA 59.928 40.000 0.00 0.00 39.34 3.02
191 192 5.880901 ACACCATAGTCCAAGTTTCAGAAT 58.119 37.500 0.00 0.00 0.00 2.40
192 193 6.306987 ACACCATAGTCCAAGTTTCAGAATT 58.693 36.000 0.00 0.00 0.00 2.17
193 194 6.207417 ACACCATAGTCCAAGTTTCAGAATTG 59.793 38.462 0.00 0.00 0.00 2.32
194 195 6.207417 CACCATAGTCCAAGTTTCAGAATTGT 59.793 38.462 0.00 0.00 0.00 2.71
195 196 6.207417 ACCATAGTCCAAGTTTCAGAATTGTG 59.793 38.462 0.00 0.00 0.00 3.33
196 197 4.574599 AGTCCAAGTTTCAGAATTGTGC 57.425 40.909 0.00 0.00 0.00 4.57
197 198 3.953612 AGTCCAAGTTTCAGAATTGTGCA 59.046 39.130 0.00 0.00 0.00 4.57
198 199 4.044426 GTCCAAGTTTCAGAATTGTGCAC 58.956 43.478 10.75 10.75 0.00 4.57
199 200 3.698539 TCCAAGTTTCAGAATTGTGCACA 59.301 39.130 17.42 17.42 0.00 4.57
200 201 3.798337 CCAAGTTTCAGAATTGTGCACAC 59.202 43.478 21.56 8.61 0.00 3.82
201 202 4.422840 CAAGTTTCAGAATTGTGCACACA 58.577 39.130 21.56 11.57 39.98 3.72
213 214 3.609103 GTGCACACACTCGAAAGAAAT 57.391 42.857 13.17 0.00 43.85 2.17
214 215 3.291585 GTGCACACACTCGAAAGAAATG 58.708 45.455 13.17 0.00 43.85 2.32
215 216 3.002246 GTGCACACACTCGAAAGAAATGA 59.998 43.478 13.17 0.00 43.85 2.57
216 217 3.002246 TGCACACACTCGAAAGAAATGAC 59.998 43.478 0.00 0.00 41.32 3.06
217 218 3.248602 GCACACACTCGAAAGAAATGACT 59.751 43.478 0.00 0.00 41.32 3.41
218 219 4.447724 GCACACACTCGAAAGAAATGACTA 59.552 41.667 0.00 0.00 41.32 2.59
219 220 5.050363 GCACACACTCGAAAGAAATGACTAA 60.050 40.000 0.00 0.00 41.32 2.24
220 221 6.584954 CACACACTCGAAAGAAATGACTAAG 58.415 40.000 0.00 0.00 41.32 2.18
221 222 5.177696 ACACACTCGAAAGAAATGACTAAGC 59.822 40.000 0.00 0.00 41.32 3.09
222 223 4.691216 ACACTCGAAAGAAATGACTAAGCC 59.309 41.667 0.00 0.00 41.32 4.35
223 224 4.690748 CACTCGAAAGAAATGACTAAGCCA 59.309 41.667 0.00 0.00 41.32 4.75
224 225 5.179368 CACTCGAAAGAAATGACTAAGCCAA 59.821 40.000 0.00 0.00 41.32 4.52
225 226 5.763204 ACTCGAAAGAAATGACTAAGCCAAA 59.237 36.000 0.00 0.00 41.32 3.28
226 227 6.073003 ACTCGAAAGAAATGACTAAGCCAAAG 60.073 38.462 0.00 0.00 41.32 2.77
227 228 4.853743 CGAAAGAAATGACTAAGCCAAAGC 59.146 41.667 0.00 0.00 40.32 3.51
228 229 4.425577 AAGAAATGACTAAGCCAAAGCG 57.574 40.909 0.00 0.00 46.67 4.68
229 230 3.412386 AGAAATGACTAAGCCAAAGCGT 58.588 40.909 0.00 0.00 46.67 5.07
230 231 3.821033 AGAAATGACTAAGCCAAAGCGTT 59.179 39.130 0.00 0.00 46.67 4.84
231 232 3.559238 AATGACTAAGCCAAAGCGTTG 57.441 42.857 5.29 5.29 46.67 4.10
248 249 1.909700 TTGGACCTCAACCAGATTGC 58.090 50.000 0.00 0.00 38.29 3.56
249 250 0.038166 TGGACCTCAACCAGATTGCC 59.962 55.000 0.00 0.00 38.29 4.52
250 251 0.038166 GGACCTCAACCAGATTGCCA 59.962 55.000 0.00 0.00 38.29 4.92
251 252 1.341383 GGACCTCAACCAGATTGCCAT 60.341 52.381 0.00 0.00 38.29 4.40
252 253 2.450476 GACCTCAACCAGATTGCCATT 58.550 47.619 0.00 0.00 38.29 3.16
253 254 3.620488 GACCTCAACCAGATTGCCATTA 58.380 45.455 0.00 0.00 38.29 1.90
254 255 4.016444 GACCTCAACCAGATTGCCATTAA 58.984 43.478 0.00 0.00 38.29 1.40
255 256 4.415596 ACCTCAACCAGATTGCCATTAAA 58.584 39.130 0.00 0.00 38.29 1.52
256 257 4.220602 ACCTCAACCAGATTGCCATTAAAC 59.779 41.667 0.00 0.00 38.29 2.01
257 258 4.220382 CCTCAACCAGATTGCCATTAAACA 59.780 41.667 0.00 0.00 38.29 2.83
258 259 5.132897 TCAACCAGATTGCCATTAAACAC 57.867 39.130 0.00 0.00 38.29 3.32
259 260 4.832266 TCAACCAGATTGCCATTAAACACT 59.168 37.500 0.00 0.00 38.29 3.55
260 261 4.789012 ACCAGATTGCCATTAAACACTG 57.211 40.909 0.00 0.00 0.00 3.66
261 262 3.056607 ACCAGATTGCCATTAAACACTGC 60.057 43.478 0.00 0.00 0.00 4.40
262 263 3.194116 CCAGATTGCCATTAAACACTGCT 59.806 43.478 0.00 0.00 0.00 4.24
263 264 4.171005 CAGATTGCCATTAAACACTGCTG 58.829 43.478 0.00 0.00 0.00 4.41
264 265 4.081406 AGATTGCCATTAAACACTGCTGA 58.919 39.130 0.00 0.00 0.00 4.26
265 266 4.523943 AGATTGCCATTAAACACTGCTGAA 59.476 37.500 0.00 0.00 0.00 3.02
266 267 4.870123 TTGCCATTAAACACTGCTGAAT 57.130 36.364 0.00 0.00 0.00 2.57
267 268 4.870123 TGCCATTAAACACTGCTGAATT 57.130 36.364 0.00 0.00 0.00 2.17
268 269 4.808558 TGCCATTAAACACTGCTGAATTC 58.191 39.130 0.00 0.00 0.00 2.17
269 270 4.176271 GCCATTAAACACTGCTGAATTCC 58.824 43.478 2.27 0.00 0.00 3.01
270 271 4.321899 GCCATTAAACACTGCTGAATTCCA 60.322 41.667 2.27 0.00 0.00 3.53
271 272 5.782047 CCATTAAACACTGCTGAATTCCAA 58.218 37.500 2.27 0.00 0.00 3.53
272 273 6.222389 CCATTAAACACTGCTGAATTCCAAA 58.778 36.000 2.27 0.00 0.00 3.28
273 274 6.875195 CCATTAAACACTGCTGAATTCCAAAT 59.125 34.615 2.27 0.00 0.00 2.32
274 275 8.034215 CCATTAAACACTGCTGAATTCCAAATA 58.966 33.333 2.27 0.00 0.00 1.40
275 276 9.421806 CATTAAACACTGCTGAATTCCAAATAA 57.578 29.630 2.27 0.00 0.00 1.40
276 277 8.810652 TTAAACACTGCTGAATTCCAAATAAC 57.189 30.769 2.27 0.00 0.00 1.89
277 278 5.391312 ACACTGCTGAATTCCAAATAACC 57.609 39.130 2.27 0.00 0.00 2.85
278 279 4.832266 ACACTGCTGAATTCCAAATAACCA 59.168 37.500 2.27 0.00 0.00 3.67
279 280 5.047802 ACACTGCTGAATTCCAAATAACCAG 60.048 40.000 2.27 0.00 0.00 4.00
280 281 5.183713 CACTGCTGAATTCCAAATAACCAGA 59.816 40.000 2.27 0.00 0.00 3.86
281 282 5.774690 ACTGCTGAATTCCAAATAACCAGAA 59.225 36.000 2.27 0.00 0.00 3.02
282 283 6.438425 ACTGCTGAATTCCAAATAACCAGAAT 59.562 34.615 2.27 0.00 0.00 2.40
283 284 7.615365 ACTGCTGAATTCCAAATAACCAGAATA 59.385 33.333 2.27 0.00 0.00 1.75
284 285 7.771183 TGCTGAATTCCAAATAACCAGAATAC 58.229 34.615 2.27 0.00 0.00 1.89
285 286 7.147915 TGCTGAATTCCAAATAACCAGAATACC 60.148 37.037 2.27 0.00 0.00 2.73
286 287 7.147915 GCTGAATTCCAAATAACCAGAATACCA 60.148 37.037 2.27 0.00 0.00 3.25
287 288 8.062065 TGAATTCCAAATAACCAGAATACCAC 57.938 34.615 2.27 0.00 0.00 4.16
288 289 7.123547 TGAATTCCAAATAACCAGAATACCACC 59.876 37.037 2.27 0.00 0.00 4.61
289 290 5.789574 TCCAAATAACCAGAATACCACCT 57.210 39.130 0.00 0.00 0.00 4.00
290 291 5.505780 TCCAAATAACCAGAATACCACCTG 58.494 41.667 0.00 0.00 0.00 4.00
291 292 5.251932 TCCAAATAACCAGAATACCACCTGA 59.748 40.000 0.00 0.00 32.37 3.86
292 293 5.949354 CCAAATAACCAGAATACCACCTGAA 59.051 40.000 0.00 0.00 32.37 3.02
293 294 6.095440 CCAAATAACCAGAATACCACCTGAAG 59.905 42.308 0.00 0.00 32.37 3.02
294 295 2.789409 ACCAGAATACCACCTGAAGC 57.211 50.000 0.00 0.00 32.37 3.86
295 296 2.269940 ACCAGAATACCACCTGAAGCT 58.730 47.619 0.00 0.00 32.37 3.74
296 297 2.237392 ACCAGAATACCACCTGAAGCTC 59.763 50.000 0.00 0.00 32.37 4.09
297 298 2.420687 CCAGAATACCACCTGAAGCTCC 60.421 54.545 0.00 0.00 32.37 4.70
298 299 1.840635 AGAATACCACCTGAAGCTCCC 59.159 52.381 0.00 0.00 0.00 4.30
299 300 1.559682 GAATACCACCTGAAGCTCCCA 59.440 52.381 0.00 0.00 0.00 4.37
300 301 0.912486 ATACCACCTGAAGCTCCCAC 59.088 55.000 0.00 0.00 0.00 4.61
301 302 0.472925 TACCACCTGAAGCTCCCACA 60.473 55.000 0.00 0.00 0.00 4.17
302 303 1.002868 CCACCTGAAGCTCCCACAG 60.003 63.158 0.00 0.00 0.00 3.66
303 304 1.483595 CCACCTGAAGCTCCCACAGA 61.484 60.000 10.34 0.00 34.07 3.41
304 305 0.397941 CACCTGAAGCTCCCACAGAA 59.602 55.000 10.34 0.00 34.07 3.02
305 306 0.689623 ACCTGAAGCTCCCACAGAAG 59.310 55.000 10.34 0.78 34.07 2.85
306 307 0.035630 CCTGAAGCTCCCACAGAAGG 60.036 60.000 10.34 0.00 34.07 3.46
315 316 1.956802 CCACAGAAGGGGAAAACGC 59.043 57.895 0.00 0.00 0.00 4.84
316 317 0.821711 CCACAGAAGGGGAAAACGCA 60.822 55.000 0.00 0.00 33.80 5.24
317 318 1.028905 CACAGAAGGGGAAAACGCAA 58.971 50.000 0.00 0.00 33.80 4.85
318 319 1.407258 CACAGAAGGGGAAAACGCAAA 59.593 47.619 0.00 0.00 33.80 3.68
319 320 1.681264 ACAGAAGGGGAAAACGCAAAG 59.319 47.619 0.00 0.00 33.80 2.77
320 321 0.673985 AGAAGGGGAAAACGCAAAGC 59.326 50.000 0.00 0.00 33.80 3.51
333 334 0.297820 GCAAAGCGATCGAACCTACG 59.702 55.000 21.57 2.65 0.00 3.51
336 337 2.023741 GCGATCGAACCTACGCGA 59.976 61.111 21.57 0.00 41.49 5.87
337 338 1.584483 GCGATCGAACCTACGCGAA 60.584 57.895 21.57 0.00 41.49 4.70
338 339 1.795432 GCGATCGAACCTACGCGAAC 61.795 60.000 21.57 0.00 41.49 3.95
339 340 0.521867 CGATCGAACCTACGCGAACA 60.522 55.000 15.93 0.00 40.20 3.18
340 341 1.621107 GATCGAACCTACGCGAACAA 58.379 50.000 15.93 0.00 40.20 2.83
341 342 1.987770 GATCGAACCTACGCGAACAAA 59.012 47.619 15.93 0.00 40.20 2.83
342 343 1.850377 TCGAACCTACGCGAACAAAA 58.150 45.000 15.93 0.00 33.04 2.44
343 344 2.406130 TCGAACCTACGCGAACAAAAT 58.594 42.857 15.93 0.00 33.04 1.82
344 345 2.156117 TCGAACCTACGCGAACAAAATG 59.844 45.455 15.93 0.00 33.04 2.32
345 346 2.239201 GAACCTACGCGAACAAAATGC 58.761 47.619 15.93 0.00 0.00 3.56
346 347 1.231221 ACCTACGCGAACAAAATGCA 58.769 45.000 15.93 0.00 0.00 3.96
347 348 1.069500 ACCTACGCGAACAAAATGCAC 60.069 47.619 15.93 0.00 0.00 4.57
348 349 1.238281 CTACGCGAACAAAATGCACG 58.762 50.000 15.93 0.00 0.00 5.34
349 350 0.582482 TACGCGAACAAAATGCACGT 59.418 45.000 15.93 0.00 36.17 4.49
350 351 0.582482 ACGCGAACAAAATGCACGTA 59.418 45.000 15.93 0.00 0.00 3.57
351 352 1.195900 ACGCGAACAAAATGCACGTAT 59.804 42.857 15.93 0.00 0.00 3.06
352 353 1.831812 CGCGAACAAAATGCACGTATC 59.168 47.619 0.00 0.00 0.00 2.24
353 354 1.831812 GCGAACAAAATGCACGTATCG 59.168 47.619 0.00 0.00 0.00 2.92
354 355 2.473212 GCGAACAAAATGCACGTATCGA 60.473 45.455 11.18 0.00 0.00 3.59
355 356 3.784199 GCGAACAAAATGCACGTATCGAT 60.784 43.478 2.16 2.16 0.00 3.59
356 357 3.953853 CGAACAAAATGCACGTATCGATC 59.046 43.478 0.00 0.00 0.00 3.69
357 358 4.259810 CGAACAAAATGCACGTATCGATCT 60.260 41.667 0.00 0.00 0.00 2.75
358 359 4.778842 ACAAAATGCACGTATCGATCTC 57.221 40.909 0.00 0.00 0.00 2.75
359 360 4.180817 ACAAAATGCACGTATCGATCTCA 58.819 39.130 0.00 0.00 0.00 3.27
360 361 4.268644 ACAAAATGCACGTATCGATCTCAG 59.731 41.667 0.00 0.00 0.00 3.35
361 362 3.990318 AATGCACGTATCGATCTCAGA 57.010 42.857 0.00 0.00 0.00 3.27
362 363 4.511617 AATGCACGTATCGATCTCAGAT 57.488 40.909 0.00 0.00 0.00 2.90
363 364 3.544356 TGCACGTATCGATCTCAGATC 57.456 47.619 0.00 4.35 0.00 2.75
364 365 2.878406 TGCACGTATCGATCTCAGATCA 59.122 45.455 15.20 2.63 0.00 2.92
365 366 3.315191 TGCACGTATCGATCTCAGATCAA 59.685 43.478 15.20 0.00 0.00 2.57
366 367 4.202010 TGCACGTATCGATCTCAGATCAAA 60.202 41.667 15.20 2.42 0.00 2.69
367 368 4.740205 GCACGTATCGATCTCAGATCAAAA 59.260 41.667 15.20 0.00 0.00 2.44
368 369 5.403766 GCACGTATCGATCTCAGATCAAAAT 59.596 40.000 15.20 7.32 0.00 1.82
369 370 6.615208 GCACGTATCGATCTCAGATCAAAATG 60.615 42.308 15.20 6.63 0.00 2.32
370 371 5.403766 ACGTATCGATCTCAGATCAAAATGC 59.596 40.000 15.20 7.40 0.00 3.56
371 372 5.632764 CGTATCGATCTCAGATCAAAATGCT 59.367 40.000 15.20 0.00 0.00 3.79
372 373 6.183359 CGTATCGATCTCAGATCAAAATGCTC 60.183 42.308 15.20 1.29 0.00 4.26
373 374 4.047142 TCGATCTCAGATCAAAATGCTCG 58.953 43.478 15.20 0.00 0.00 5.03
374 375 4.047142 CGATCTCAGATCAAAATGCTCGA 58.953 43.478 15.20 0.00 0.00 4.04
375 376 4.085158 CGATCTCAGATCAAAATGCTCGAC 60.085 45.833 15.20 0.00 0.00 4.20
376 377 3.525537 TCTCAGATCAAAATGCTCGACC 58.474 45.455 0.00 0.00 0.00 4.79
377 378 3.196469 TCTCAGATCAAAATGCTCGACCT 59.804 43.478 0.00 0.00 0.00 3.85
378 379 3.937706 CTCAGATCAAAATGCTCGACCTT 59.062 43.478 0.00 0.00 0.00 3.50
379 380 3.686241 TCAGATCAAAATGCTCGACCTTG 59.314 43.478 0.00 0.00 0.00 3.61
380 381 3.012518 AGATCAAAATGCTCGACCTTGG 58.987 45.455 0.00 0.00 0.00 3.61
381 382 2.270352 TCAAAATGCTCGACCTTGGT 57.730 45.000 0.00 0.00 0.00 3.67
382 383 2.582052 TCAAAATGCTCGACCTTGGTT 58.418 42.857 0.00 0.00 0.00 3.67
383 384 2.955660 TCAAAATGCTCGACCTTGGTTT 59.044 40.909 0.00 0.00 0.00 3.27
384 385 3.004315 TCAAAATGCTCGACCTTGGTTTC 59.996 43.478 0.00 0.00 0.00 2.78
385 386 2.568623 AATGCTCGACCTTGGTTTCT 57.431 45.000 0.00 0.00 0.00 2.52
386 387 2.568623 ATGCTCGACCTTGGTTTCTT 57.431 45.000 0.00 0.00 0.00 2.52
387 388 1.593196 TGCTCGACCTTGGTTTCTTG 58.407 50.000 0.00 0.00 0.00 3.02
388 389 0.238553 GCTCGACCTTGGTTTCTTGC 59.761 55.000 0.00 0.00 0.00 4.01
389 390 1.593196 CTCGACCTTGGTTTCTTGCA 58.407 50.000 0.00 0.00 0.00 4.08
390 391 1.532868 CTCGACCTTGGTTTCTTGCAG 59.467 52.381 0.00 0.00 0.00 4.41
391 392 1.140052 TCGACCTTGGTTTCTTGCAGA 59.860 47.619 0.00 0.00 0.00 4.26
392 393 1.264288 CGACCTTGGTTTCTTGCAGAC 59.736 52.381 0.00 0.00 0.00 3.51
393 394 2.297701 GACCTTGGTTTCTTGCAGACA 58.702 47.619 0.00 0.00 0.00 3.41
394 395 2.887152 GACCTTGGTTTCTTGCAGACAT 59.113 45.455 0.00 0.00 0.00 3.06
395 396 4.072131 GACCTTGGTTTCTTGCAGACATA 58.928 43.478 0.00 0.00 0.00 2.29
396 397 4.666512 ACCTTGGTTTCTTGCAGACATAT 58.333 39.130 0.00 0.00 0.00 1.78
397 398 4.460382 ACCTTGGTTTCTTGCAGACATATG 59.540 41.667 0.00 0.00 0.00 1.78
398 399 4.701651 CCTTGGTTTCTTGCAGACATATGA 59.298 41.667 10.38 0.00 0.00 2.15
399 400 5.359009 CCTTGGTTTCTTGCAGACATATGAT 59.641 40.000 10.38 0.00 0.00 2.45
400 401 6.543465 CCTTGGTTTCTTGCAGACATATGATA 59.457 38.462 10.38 0.00 0.00 2.15
401 402 7.255035 CCTTGGTTTCTTGCAGACATATGATAG 60.255 40.741 10.38 0.00 0.00 2.08
402 403 6.888105 TGGTTTCTTGCAGACATATGATAGA 58.112 36.000 10.38 0.14 0.00 1.98
403 404 7.337938 TGGTTTCTTGCAGACATATGATAGAA 58.662 34.615 10.38 5.92 0.00 2.10
404 405 7.280876 TGGTTTCTTGCAGACATATGATAGAAC 59.719 37.037 10.38 2.18 0.00 3.01
405 406 7.280876 GGTTTCTTGCAGACATATGATAGAACA 59.719 37.037 10.38 0.00 0.00 3.18
406 407 8.834465 GTTTCTTGCAGACATATGATAGAACAT 58.166 33.333 10.38 0.00 0.00 2.71
407 408 8.969260 TTCTTGCAGACATATGATAGAACATT 57.031 30.769 10.38 0.00 0.00 2.71
408 409 8.969260 TCTTGCAGACATATGATAGAACATTT 57.031 30.769 10.38 0.00 0.00 2.32
409 410 8.833493 TCTTGCAGACATATGATAGAACATTTG 58.167 33.333 10.38 0.00 36.08 2.32
410 411 6.962686 TGCAGACATATGATAGAACATTTGC 58.037 36.000 10.38 2.20 34.35 3.68
411 412 6.769341 TGCAGACATATGATAGAACATTTGCT 59.231 34.615 10.38 0.00 34.35 3.91
412 413 7.283807 TGCAGACATATGATAGAACATTTGCTT 59.716 33.333 10.38 0.00 34.35 3.91
413 414 8.133627 GCAGACATATGATAGAACATTTGCTTT 58.866 33.333 10.38 0.00 34.35 3.51
414 415 9.661187 CAGACATATGATAGAACATTTGCTTTC 57.339 33.333 10.38 0.00 34.35 2.62
415 416 9.624373 AGACATATGATAGAACATTTGCTTTCT 57.376 29.630 10.38 0.00 34.35 2.52
422 423 9.985730 TGATAGAACATTTGCTTTCTTCAATTT 57.014 25.926 0.00 0.00 33.96 1.82
426 427 8.768019 AGAACATTTGCTTTCTTCAATTTTAGC 58.232 29.630 0.00 0.00 0.00 3.09
427 428 8.667076 AACATTTGCTTTCTTCAATTTTAGCT 57.333 26.923 0.00 0.00 0.00 3.32
428 429 8.302965 ACATTTGCTTTCTTCAATTTTAGCTC 57.697 30.769 0.00 0.00 0.00 4.09
429 430 6.991485 TTTGCTTTCTTCAATTTTAGCTCG 57.009 33.333 0.00 0.00 0.00 5.03
430 431 5.046910 TGCTTTCTTCAATTTTAGCTCGG 57.953 39.130 0.00 0.00 0.00 4.63
431 432 4.759693 TGCTTTCTTCAATTTTAGCTCGGA 59.240 37.500 0.00 0.00 0.00 4.55
432 433 5.089411 GCTTTCTTCAATTTTAGCTCGGAC 58.911 41.667 0.00 0.00 0.00 4.79
433 434 5.334879 GCTTTCTTCAATTTTAGCTCGGACA 60.335 40.000 0.00 0.00 0.00 4.02
434 435 6.623767 GCTTTCTTCAATTTTAGCTCGGACAT 60.624 38.462 0.00 0.00 0.00 3.06
435 436 6.422776 TTCTTCAATTTTAGCTCGGACATC 57.577 37.500 0.00 0.00 0.00 3.06
436 437 4.876107 TCTTCAATTTTAGCTCGGACATCC 59.124 41.667 0.00 0.00 0.00 3.51
437 438 3.541632 TCAATTTTAGCTCGGACATCCC 58.458 45.455 0.00 0.00 0.00 3.85
438 439 3.199946 TCAATTTTAGCTCGGACATCCCT 59.800 43.478 0.00 0.00 0.00 4.20
439 440 3.933861 ATTTTAGCTCGGACATCCCTT 57.066 42.857 0.00 0.00 0.00 3.95
440 441 3.713826 TTTTAGCTCGGACATCCCTTT 57.286 42.857 0.00 0.00 0.00 3.11
441 442 2.691409 TTAGCTCGGACATCCCTTTG 57.309 50.000 0.00 0.00 0.00 2.77
442 443 0.178068 TAGCTCGGACATCCCTTTGC 59.822 55.000 0.00 0.00 0.00 3.68
443 444 2.115291 GCTCGGACATCCCTTTGCC 61.115 63.158 0.00 0.00 0.00 4.52
444 445 1.604378 CTCGGACATCCCTTTGCCT 59.396 57.895 0.00 0.00 0.00 4.75
445 446 0.745845 CTCGGACATCCCTTTGCCTG 60.746 60.000 0.00 0.00 0.00 4.85
446 447 1.002134 CGGACATCCCTTTGCCTGT 60.002 57.895 0.00 0.00 0.00 4.00
447 448 1.026718 CGGACATCCCTTTGCCTGTC 61.027 60.000 0.00 0.00 37.79 3.51
448 449 2.873797 GACATCCCTTTGCCTGTCC 58.126 57.895 0.00 0.00 33.51 4.02
449 450 0.329596 GACATCCCTTTGCCTGTCCT 59.670 55.000 0.00 0.00 33.51 3.85
450 451 0.329596 ACATCCCTTTGCCTGTCCTC 59.670 55.000 0.00 0.00 0.00 3.71
451 452 0.329261 CATCCCTTTGCCTGTCCTCA 59.671 55.000 0.00 0.00 0.00 3.86
452 453 0.622665 ATCCCTTTGCCTGTCCTCAG 59.377 55.000 0.00 0.00 41.01 3.35
453 454 0.473694 TCCCTTTGCCTGTCCTCAGA 60.474 55.000 0.00 0.00 43.76 3.27
454 455 0.035630 CCCTTTGCCTGTCCTCAGAG 60.036 60.000 0.00 0.00 43.76 3.35
455 456 0.689623 CCTTTGCCTGTCCTCAGAGT 59.310 55.000 0.00 0.00 43.76 3.24
456 457 1.072965 CCTTTGCCTGTCCTCAGAGTT 59.927 52.381 0.00 0.00 43.76 3.01
457 458 2.421619 CTTTGCCTGTCCTCAGAGTTC 58.578 52.381 0.00 0.00 43.76 3.01
458 459 1.423584 TTGCCTGTCCTCAGAGTTCA 58.576 50.000 0.00 0.00 43.76 3.18
459 460 0.972134 TGCCTGTCCTCAGAGTTCAG 59.028 55.000 10.46 10.46 43.76 3.02
460 461 0.248843 GCCTGTCCTCAGAGTTCAGG 59.751 60.000 23.41 23.41 45.68 3.86
461 462 0.248843 CCTGTCCTCAGAGTTCAGGC 59.751 60.000 19.01 0.00 43.76 4.85
462 463 0.248843 CTGTCCTCAGAGTTCAGGCC 59.751 60.000 0.00 0.00 43.76 5.19
463 464 0.471780 TGTCCTCAGAGTTCAGGCCA 60.472 55.000 5.01 0.00 0.00 5.36
464 465 0.036858 GTCCTCAGAGTTCAGGCCAC 60.037 60.000 5.01 0.00 0.00 5.01
465 466 1.079543 CCTCAGAGTTCAGGCCACG 60.080 63.158 5.01 0.00 0.00 4.94
466 467 1.739562 CTCAGAGTTCAGGCCACGC 60.740 63.158 5.01 0.00 0.00 5.34
467 468 2.031012 CAGAGTTCAGGCCACGCA 59.969 61.111 5.01 0.00 0.00 5.24
468 469 2.031163 AGAGTTCAGGCCACGCAC 59.969 61.111 5.01 0.00 0.00 5.34
469 470 2.280797 GAGTTCAGGCCACGCACA 60.281 61.111 5.01 0.00 0.00 4.57
470 471 1.672356 GAGTTCAGGCCACGCACAT 60.672 57.895 5.01 0.00 0.00 3.21
471 472 1.228245 AGTTCAGGCCACGCACATT 60.228 52.632 5.01 0.00 0.00 2.71
472 473 1.210155 GTTCAGGCCACGCACATTC 59.790 57.895 5.01 0.00 0.00 2.67
848 849 2.724977 TCGAAGACGAAAGCAGTGAT 57.275 45.000 0.00 0.00 45.74 3.06
1164 1165 1.222661 CCTAGCATGTGCAGAGCCA 59.777 57.895 7.83 0.00 45.16 4.75
2031 2036 1.542915 GCACAAGCAACAGTCATCCAT 59.457 47.619 0.00 0.00 41.58 3.41
2311 2316 4.081862 GGTTGTGTAGTGTATGGCTCTACA 60.082 45.833 8.82 8.82 46.01 2.74
2832 3467 2.157848 ACCCCTAGCCACCATATACCAT 60.158 50.000 0.00 0.00 0.00 3.55
2833 3468 3.079998 ACCCCTAGCCACCATATACCATA 59.920 47.826 0.00 0.00 0.00 2.74
2834 3469 4.108570 CCCCTAGCCACCATATACCATAA 58.891 47.826 0.00 0.00 0.00 1.90
2835 3470 4.726825 CCCCTAGCCACCATATACCATAAT 59.273 45.833 0.00 0.00 0.00 1.28
2836 3471 5.397899 CCCCTAGCCACCATATACCATAATG 60.398 48.000 0.00 0.00 0.00 1.90
2837 3472 5.397899 CCCTAGCCACCATATACCATAATGG 60.398 48.000 0.00 0.00 46.76 3.16
2854 3489 8.166422 CCATAATGGTTAGATTAAGGTGGTTC 57.834 38.462 0.00 0.00 31.35 3.62
2855 3490 7.230712 CCATAATGGTTAGATTAAGGTGGTTCC 59.769 40.741 0.00 0.00 31.35 3.62
2856 3491 4.210724 TGGTTAGATTAAGGTGGTTCCG 57.789 45.455 0.00 0.00 41.99 4.30
2857 3492 3.583966 TGGTTAGATTAAGGTGGTTCCGT 59.416 43.478 0.00 0.00 41.99 4.69
2858 3493 4.186926 GGTTAGATTAAGGTGGTTCCGTC 58.813 47.826 0.00 0.00 41.99 4.79
2859 3494 2.667473 AGATTAAGGTGGTTCCGTCG 57.333 50.000 0.00 0.00 41.99 5.12
2860 3495 2.173519 AGATTAAGGTGGTTCCGTCGA 58.826 47.619 0.00 0.00 41.99 4.20
2861 3496 2.094338 AGATTAAGGTGGTTCCGTCGAC 60.094 50.000 5.18 5.18 41.99 4.20
2862 3497 0.318120 TTAAGGTGGTTCCGTCGACC 59.682 55.000 10.58 0.00 41.99 4.79
2863 3498 1.535204 TAAGGTGGTTCCGTCGACCC 61.535 60.000 10.58 5.77 41.99 4.46
2864 3499 4.383861 GGTGGTTCCGTCGACCCC 62.384 72.222 10.58 5.66 36.30 4.95
2865 3500 3.308705 GTGGTTCCGTCGACCCCT 61.309 66.667 10.58 0.00 36.30 4.79
2866 3501 1.978617 GTGGTTCCGTCGACCCCTA 60.979 63.158 10.58 0.00 36.30 3.53
2867 3502 1.679977 TGGTTCCGTCGACCCCTAG 60.680 63.158 10.58 0.00 36.30 3.02
2868 3503 2.493501 GTTCCGTCGACCCCTAGC 59.506 66.667 10.58 0.00 0.00 3.42
2869 3504 2.757099 TTCCGTCGACCCCTAGCC 60.757 66.667 10.58 0.00 0.00 3.93
2870 3505 3.588817 TTCCGTCGACCCCTAGCCA 62.589 63.158 10.58 0.00 0.00 4.75
2871 3506 3.834799 CCGTCGACCCCTAGCCAC 61.835 72.222 10.58 0.00 0.00 5.01
2872 3507 3.834799 CGTCGACCCCTAGCCACC 61.835 72.222 10.58 0.00 0.00 4.61
2873 3508 2.682494 GTCGACCCCTAGCCACCA 60.682 66.667 3.51 0.00 0.00 4.17
2874 3509 2.064581 GTCGACCCCTAGCCACCAT 61.065 63.158 3.51 0.00 0.00 3.55
2875 3510 0.757935 GTCGACCCCTAGCCACCATA 60.758 60.000 3.51 0.00 0.00 2.74
2876 3511 0.031917 TCGACCCCTAGCCACCATAA 60.032 55.000 0.00 0.00 0.00 1.90
2877 3512 0.834612 CGACCCCTAGCCACCATAAA 59.165 55.000 0.00 0.00 0.00 1.40
2878 3513 1.474498 CGACCCCTAGCCACCATAAAC 60.474 57.143 0.00 0.00 0.00 2.01
2879 3514 0.924090 ACCCCTAGCCACCATAAACC 59.076 55.000 0.00 0.00 0.00 3.27
2880 3515 0.185175 CCCCTAGCCACCATAAACCC 59.815 60.000 0.00 0.00 0.00 4.11
2881 3516 1.222567 CCCTAGCCACCATAAACCCT 58.777 55.000 0.00 0.00 0.00 4.34
2882 3517 2.414612 CCCTAGCCACCATAAACCCTA 58.585 52.381 0.00 0.00 0.00 3.53
2883 3518 2.781174 CCCTAGCCACCATAAACCCTAA 59.219 50.000 0.00 0.00 0.00 2.69
2884 3519 3.397955 CCCTAGCCACCATAAACCCTAAT 59.602 47.826 0.00 0.00 0.00 1.73
2885 3520 4.398319 CCTAGCCACCATAAACCCTAATG 58.602 47.826 0.00 0.00 0.00 1.90
2886 3521 3.312736 AGCCACCATAAACCCTAATGG 57.687 47.619 0.00 0.00 46.76 3.16
2903 3538 7.387119 CCTAATGGTTAGGTTAAGTTGGTTC 57.613 40.000 7.45 0.00 46.26 3.62
2904 3539 6.376299 CCTAATGGTTAGGTTAAGTTGGTTCC 59.624 42.308 7.45 0.00 46.26 3.62
2905 3540 4.103013 TGGTTAGGTTAAGTTGGTTCCC 57.897 45.455 0.00 0.00 0.00 3.97
2906 3541 3.723154 TGGTTAGGTTAAGTTGGTTCCCT 59.277 43.478 0.00 0.00 0.00 4.20
2907 3542 4.202493 TGGTTAGGTTAAGTTGGTTCCCTC 60.202 45.833 0.00 0.00 0.00 4.30
2908 3543 2.853235 AGGTTAAGTTGGTTCCCTCG 57.147 50.000 0.00 0.00 0.00 4.63
2909 3544 2.332117 AGGTTAAGTTGGTTCCCTCGA 58.668 47.619 0.00 0.00 0.00 4.04
2910 3545 2.038164 AGGTTAAGTTGGTTCCCTCGAC 59.962 50.000 0.00 0.00 0.00 4.20
2911 3546 2.420642 GTTAAGTTGGTTCCCTCGACC 58.579 52.381 0.00 0.00 37.69 4.79
2912 3547 0.978907 TAAGTTGGTTCCCTCGACCC 59.021 55.000 0.00 0.00 36.30 4.46
2913 3548 1.775934 AAGTTGGTTCCCTCGACCCC 61.776 60.000 0.00 0.00 36.30 4.95
2914 3549 2.206036 TTGGTTCCCTCGACCCCT 59.794 61.111 0.00 0.00 36.30 4.79
2915 3550 0.906282 GTTGGTTCCCTCGACCCCTA 60.906 60.000 0.00 0.00 36.30 3.53
2916 3551 0.616679 TTGGTTCCCTCGACCCCTAG 60.617 60.000 0.00 0.00 36.30 3.02
2917 3552 2.433146 GGTTCCCTCGACCCCTAGC 61.433 68.421 0.00 0.00 0.00 3.42
2918 3553 2.042230 TTCCCTCGACCCCTAGCC 60.042 66.667 0.00 0.00 0.00 3.93
2919 3554 2.938511 TTCCCTCGACCCCTAGCCA 61.939 63.158 0.00 0.00 0.00 4.75
2920 3555 3.155167 CCCTCGACCCCTAGCCAC 61.155 72.222 0.00 0.00 0.00 5.01
2921 3556 3.155167 CCTCGACCCCTAGCCACC 61.155 72.222 0.00 0.00 0.00 4.61
2922 3557 2.363795 CTCGACCCCTAGCCACCA 60.364 66.667 0.00 0.00 0.00 4.17
2923 3558 1.762460 CTCGACCCCTAGCCACCAT 60.762 63.158 0.00 0.00 0.00 3.55
2924 3559 0.469331 CTCGACCCCTAGCCACCATA 60.469 60.000 0.00 0.00 0.00 2.74
2925 3560 0.031917 TCGACCCCTAGCCACCATAA 60.032 55.000 0.00 0.00 0.00 1.90
2926 3561 0.834612 CGACCCCTAGCCACCATAAA 59.165 55.000 0.00 0.00 0.00 1.40
2927 3562 1.474498 CGACCCCTAGCCACCATAAAC 60.474 57.143 0.00 0.00 0.00 2.01
2928 3563 0.924090 ACCCCTAGCCACCATAAACC 59.076 55.000 0.00 0.00 0.00 3.27
2929 3564 0.185175 CCCCTAGCCACCATAAACCC 59.815 60.000 0.00 0.00 0.00 4.11
3119 3808 4.503741 ACACATTGTAGTGGCATCAAAC 57.496 40.909 0.00 0.00 43.72 2.93
3120 3809 4.144297 ACACATTGTAGTGGCATCAAACT 58.856 39.130 0.00 0.00 43.72 2.66
3121 3810 4.216257 ACACATTGTAGTGGCATCAAACTC 59.784 41.667 0.00 0.00 43.72 3.01
3122 3811 4.456911 CACATTGTAGTGGCATCAAACTCT 59.543 41.667 0.00 0.00 35.88 3.24
3125 3814 6.714810 ACATTGTAGTGGCATCAAACTCTAAA 59.285 34.615 0.00 0.00 0.00 1.85
3126 3815 7.394359 ACATTGTAGTGGCATCAAACTCTAAAT 59.606 33.333 0.00 0.00 0.00 1.40
3128 3817 8.492673 TTGTAGTGGCATCAAACTCTAAATAG 57.507 34.615 0.00 0.00 0.00 1.73
3129 3818 7.620880 TGTAGTGGCATCAAACTCTAAATAGT 58.379 34.615 0.00 0.00 0.00 2.12
3130 3819 6.992063 AGTGGCATCAAACTCTAAATAGTG 57.008 37.500 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.136323 GGGGAGATGTTAATGATATTTTTCTGT 57.864 33.333 0.00 0.00 0.00 3.41
2 3 8.712228 GGGGGAGATGTTAATGATATTTTTCT 57.288 34.615 0.00 0.00 0.00 2.52
24 25 3.500471 GGATAATAGGAAAAGGCAGGGGG 60.500 52.174 0.00 0.00 0.00 5.40
25 26 3.140144 TGGATAATAGGAAAAGGCAGGGG 59.860 47.826 0.00 0.00 0.00 4.79
26 27 4.453480 TGGATAATAGGAAAAGGCAGGG 57.547 45.455 0.00 0.00 0.00 4.45
27 28 6.129179 TCTTTGGATAATAGGAAAAGGCAGG 58.871 40.000 0.00 0.00 0.00 4.85
28 29 7.308229 CGATCTTTGGATAATAGGAAAAGGCAG 60.308 40.741 0.00 0.00 31.46 4.85
29 30 6.486657 CGATCTTTGGATAATAGGAAAAGGCA 59.513 38.462 0.00 0.00 31.46 4.75
30 31 6.072452 CCGATCTTTGGATAATAGGAAAAGGC 60.072 42.308 0.00 0.00 31.46 4.35
31 32 7.224297 TCCGATCTTTGGATAATAGGAAAAGG 58.776 38.462 0.00 0.00 31.46 3.11
32 33 8.854614 ATCCGATCTTTGGATAATAGGAAAAG 57.145 34.615 0.00 0.00 44.38 2.27
44 45 9.189156 AGATTTCAATTTTATCCGATCTTTGGA 57.811 29.630 0.00 0.00 40.46 3.53
45 46 9.455847 GAGATTTCAATTTTATCCGATCTTTGG 57.544 33.333 0.00 0.00 0.00 3.28
46 47 9.455847 GGAGATTTCAATTTTATCCGATCTTTG 57.544 33.333 0.00 0.00 0.00 2.77
47 48 9.189156 TGGAGATTTCAATTTTATCCGATCTTT 57.811 29.630 0.00 0.00 0.00 2.52
48 49 8.752005 TGGAGATTTCAATTTTATCCGATCTT 57.248 30.769 0.00 0.00 0.00 2.40
49 50 8.752005 TTGGAGATTTCAATTTTATCCGATCT 57.248 30.769 0.00 0.00 0.00 2.75
50 51 7.592903 GCTTGGAGATTTCAATTTTATCCGATC 59.407 37.037 0.00 0.00 0.00 3.69
51 52 7.068593 TGCTTGGAGATTTCAATTTTATCCGAT 59.931 33.333 0.00 0.00 0.00 4.18
52 53 6.376864 TGCTTGGAGATTTCAATTTTATCCGA 59.623 34.615 0.00 0.00 0.00 4.55
53 54 6.563422 TGCTTGGAGATTTCAATTTTATCCG 58.437 36.000 0.00 0.00 0.00 4.18
54 55 8.253113 TCTTGCTTGGAGATTTCAATTTTATCC 58.747 33.333 0.00 0.00 0.00 2.59
55 56 9.298774 CTCTTGCTTGGAGATTTCAATTTTATC 57.701 33.333 0.00 0.00 33.03 1.75
56 57 7.763071 GCTCTTGCTTGGAGATTTCAATTTTAT 59.237 33.333 5.58 0.00 36.03 1.40
57 58 7.092716 GCTCTTGCTTGGAGATTTCAATTTTA 58.907 34.615 5.58 0.00 36.03 1.52
58 59 5.930569 GCTCTTGCTTGGAGATTTCAATTTT 59.069 36.000 5.58 0.00 36.03 1.82
59 60 5.476614 GCTCTTGCTTGGAGATTTCAATTT 58.523 37.500 5.58 0.00 36.03 1.82
60 61 4.081807 GGCTCTTGCTTGGAGATTTCAATT 60.082 41.667 5.58 0.00 39.59 2.32
61 62 3.446516 GGCTCTTGCTTGGAGATTTCAAT 59.553 43.478 5.58 0.00 39.59 2.57
62 63 2.821969 GGCTCTTGCTTGGAGATTTCAA 59.178 45.455 5.58 0.00 39.59 2.69
63 64 2.224843 TGGCTCTTGCTTGGAGATTTCA 60.225 45.455 5.58 0.00 39.59 2.69
64 65 2.422832 CTGGCTCTTGCTTGGAGATTTC 59.577 50.000 5.58 0.00 39.59 2.17
65 66 2.224967 ACTGGCTCTTGCTTGGAGATTT 60.225 45.455 5.58 0.00 39.59 2.17
66 67 1.353694 ACTGGCTCTTGCTTGGAGATT 59.646 47.619 5.58 0.00 39.59 2.40
67 68 0.990374 ACTGGCTCTTGCTTGGAGAT 59.010 50.000 5.58 0.00 39.59 2.75
68 69 0.767375 AACTGGCTCTTGCTTGGAGA 59.233 50.000 5.58 0.00 39.59 3.71
69 70 1.613836 AAACTGGCTCTTGCTTGGAG 58.386 50.000 0.00 0.00 39.59 3.86
70 71 1.682854 CAAAACTGGCTCTTGCTTGGA 59.317 47.619 0.00 0.00 39.59 3.53
71 72 1.682854 TCAAAACTGGCTCTTGCTTGG 59.317 47.619 0.00 0.00 39.59 3.61
72 73 3.255149 AGATCAAAACTGGCTCTTGCTTG 59.745 43.478 0.00 0.00 39.59 4.01
73 74 3.494332 AGATCAAAACTGGCTCTTGCTT 58.506 40.909 0.00 0.00 39.59 3.91
74 75 3.151912 AGATCAAAACTGGCTCTTGCT 57.848 42.857 0.00 0.00 39.59 3.91
75 76 4.006319 ACTAGATCAAAACTGGCTCTTGC 58.994 43.478 0.00 0.00 38.76 4.01
76 77 4.394300 CCACTAGATCAAAACTGGCTCTTG 59.606 45.833 0.00 0.00 0.00 3.02
77 78 4.042187 ACCACTAGATCAAAACTGGCTCTT 59.958 41.667 0.00 0.00 0.00 2.85
78 79 3.584848 ACCACTAGATCAAAACTGGCTCT 59.415 43.478 0.00 0.00 0.00 4.09
79 80 3.944087 ACCACTAGATCAAAACTGGCTC 58.056 45.455 0.00 0.00 0.00 4.70
80 81 5.700402 ATACCACTAGATCAAAACTGGCT 57.300 39.130 0.00 0.00 0.00 4.75
81 82 5.992217 CCTATACCACTAGATCAAAACTGGC 59.008 44.000 0.00 0.00 0.00 4.85
82 83 6.326583 TCCCTATACCACTAGATCAAAACTGG 59.673 42.308 0.00 0.00 0.00 4.00
83 84 7.361457 TCCCTATACCACTAGATCAAAACTG 57.639 40.000 0.00 0.00 0.00 3.16
84 85 6.555360 CCTCCCTATACCACTAGATCAAAACT 59.445 42.308 0.00 0.00 0.00 2.66
85 86 6.326843 ACCTCCCTATACCACTAGATCAAAAC 59.673 42.308 0.00 0.00 0.00 2.43
86 87 6.326583 CACCTCCCTATACCACTAGATCAAAA 59.673 42.308 0.00 0.00 0.00 2.44
87 88 5.839063 CACCTCCCTATACCACTAGATCAAA 59.161 44.000 0.00 0.00 0.00 2.69
88 89 5.135533 TCACCTCCCTATACCACTAGATCAA 59.864 44.000 0.00 0.00 0.00 2.57
89 90 4.668335 TCACCTCCCTATACCACTAGATCA 59.332 45.833 0.00 0.00 0.00 2.92
90 91 5.258216 TCACCTCCCTATACCACTAGATC 57.742 47.826 0.00 0.00 0.00 2.75
91 92 5.887480 ATCACCTCCCTATACCACTAGAT 57.113 43.478 0.00 0.00 0.00 1.98
92 93 5.613973 TGTATCACCTCCCTATACCACTAGA 59.386 44.000 0.00 0.00 0.00 2.43
93 94 5.888901 TGTATCACCTCCCTATACCACTAG 58.111 45.833 0.00 0.00 0.00 2.57
94 95 5.935668 TGTATCACCTCCCTATACCACTA 57.064 43.478 0.00 0.00 0.00 2.74
95 96 4.827036 TGTATCACCTCCCTATACCACT 57.173 45.455 0.00 0.00 0.00 4.00
96 97 4.040095 GGTTGTATCACCTCCCTATACCAC 59.960 50.000 0.00 0.00 33.50 4.16
97 98 4.228824 GGTTGTATCACCTCCCTATACCA 58.771 47.826 0.00 0.00 33.50 3.25
98 99 4.228824 TGGTTGTATCACCTCCCTATACC 58.771 47.826 0.00 0.00 37.75 2.73
99 100 6.042781 TCAATGGTTGTATCACCTCCCTATAC 59.957 42.308 0.00 0.00 37.75 1.47
100 101 6.147473 TCAATGGTTGTATCACCTCCCTATA 58.853 40.000 0.00 0.00 37.75 1.31
101 102 4.975147 TCAATGGTTGTATCACCTCCCTAT 59.025 41.667 0.00 0.00 37.75 2.57
102 103 4.367166 TCAATGGTTGTATCACCTCCCTA 58.633 43.478 0.00 0.00 37.75 3.53
103 104 3.189606 TCAATGGTTGTATCACCTCCCT 58.810 45.455 0.00 0.00 37.75 4.20
104 105 3.644966 TCAATGGTTGTATCACCTCCC 57.355 47.619 0.00 0.00 37.75 4.30
105 106 4.331968 TGTTCAATGGTTGTATCACCTCC 58.668 43.478 0.00 0.00 37.75 4.30
106 107 5.957842 TTGTTCAATGGTTGTATCACCTC 57.042 39.130 0.00 0.00 37.75 3.85
107 108 6.723298 TTTTGTTCAATGGTTGTATCACCT 57.277 33.333 0.00 0.00 37.75 4.00
108 109 7.151308 TGATTTTGTTCAATGGTTGTATCACC 58.849 34.615 0.00 0.00 37.34 4.02
109 110 8.761575 ATGATTTTGTTCAATGGTTGTATCAC 57.238 30.769 0.00 0.00 0.00 3.06
110 111 8.034215 GGATGATTTTGTTCAATGGTTGTATCA 58.966 33.333 0.00 0.00 0.00 2.15
111 112 7.492344 GGGATGATTTTGTTCAATGGTTGTATC 59.508 37.037 0.00 0.00 0.00 2.24
112 113 7.180766 AGGGATGATTTTGTTCAATGGTTGTAT 59.819 33.333 0.00 0.00 0.00 2.29
113 114 6.496565 AGGGATGATTTTGTTCAATGGTTGTA 59.503 34.615 0.00 0.00 0.00 2.41
114 115 5.307716 AGGGATGATTTTGTTCAATGGTTGT 59.692 36.000 0.00 0.00 0.00 3.32
115 116 5.797051 AGGGATGATTTTGTTCAATGGTTG 58.203 37.500 0.00 0.00 0.00 3.77
116 117 6.438186 AAGGGATGATTTTGTTCAATGGTT 57.562 33.333 0.00 0.00 0.00 3.67
117 118 6.725834 ACTAAGGGATGATTTTGTTCAATGGT 59.274 34.615 0.00 0.00 0.00 3.55
118 119 7.037438 CACTAAGGGATGATTTTGTTCAATGG 58.963 38.462 0.00 0.00 0.00 3.16
119 120 7.037438 CCACTAAGGGATGATTTTGTTCAATG 58.963 38.462 0.00 0.00 0.00 2.82
120 121 6.351286 GCCACTAAGGGATGATTTTGTTCAAT 60.351 38.462 0.00 0.00 38.09 2.57
121 122 5.047377 GCCACTAAGGGATGATTTTGTTCAA 60.047 40.000 0.00 0.00 38.09 2.69
122 123 4.462483 GCCACTAAGGGATGATTTTGTTCA 59.538 41.667 0.00 0.00 38.09 3.18
123 124 4.142160 GGCCACTAAGGGATGATTTTGTTC 60.142 45.833 0.00 0.00 38.09 3.18
124 125 3.769300 GGCCACTAAGGGATGATTTTGTT 59.231 43.478 0.00 0.00 38.09 2.83
125 126 3.365472 GGCCACTAAGGGATGATTTTGT 58.635 45.455 0.00 0.00 38.09 2.83
126 127 2.695147 GGGCCACTAAGGGATGATTTTG 59.305 50.000 4.39 0.00 38.09 2.44
127 128 2.587307 AGGGCCACTAAGGGATGATTTT 59.413 45.455 6.18 0.00 38.09 1.82
128 129 2.217776 AGGGCCACTAAGGGATGATTT 58.782 47.619 6.18 0.00 38.09 2.17
129 130 1.912862 AGGGCCACTAAGGGATGATT 58.087 50.000 6.18 0.00 38.09 2.57
130 131 1.496429 CAAGGGCCACTAAGGGATGAT 59.504 52.381 6.18 0.00 38.09 2.45
131 132 0.918983 CAAGGGCCACTAAGGGATGA 59.081 55.000 6.18 0.00 38.09 2.92
132 133 0.106519 CCAAGGGCCACTAAGGGATG 60.107 60.000 6.18 0.00 38.09 3.51
133 134 1.937924 GCCAAGGGCCACTAAGGGAT 61.938 60.000 6.18 0.00 44.06 3.85
134 135 2.612493 GCCAAGGGCCACTAAGGGA 61.612 63.158 6.18 0.00 44.06 4.20
135 136 2.043953 GCCAAGGGCCACTAAGGG 60.044 66.667 6.18 3.84 44.06 3.95
151 152 1.134946 GTGTCTGTTTATGGCCCATGC 59.865 52.381 6.46 0.00 0.00 4.06
152 153 1.750778 GGTGTCTGTTTATGGCCCATG 59.249 52.381 6.46 0.00 0.00 3.66
153 154 1.357420 TGGTGTCTGTTTATGGCCCAT 59.643 47.619 0.00 0.00 0.00 4.00
154 155 0.774276 TGGTGTCTGTTTATGGCCCA 59.226 50.000 0.00 0.00 0.00 5.36
155 156 2.143876 ATGGTGTCTGTTTATGGCCC 57.856 50.000 0.00 0.00 0.00 5.80
156 157 3.877508 GACTATGGTGTCTGTTTATGGCC 59.122 47.826 0.00 0.00 34.39 5.36
157 158 3.877508 GGACTATGGTGTCTGTTTATGGC 59.122 47.826 0.00 0.00 37.16 4.40
158 159 5.097742 TGGACTATGGTGTCTGTTTATGG 57.902 43.478 0.00 0.00 37.16 2.74
159 160 6.173339 ACTTGGACTATGGTGTCTGTTTATG 58.827 40.000 0.00 0.00 37.16 1.90
160 161 6.374417 ACTTGGACTATGGTGTCTGTTTAT 57.626 37.500 0.00 0.00 37.16 1.40
161 162 5.818678 ACTTGGACTATGGTGTCTGTTTA 57.181 39.130 0.00 0.00 37.16 2.01
162 163 4.706842 ACTTGGACTATGGTGTCTGTTT 57.293 40.909 0.00 0.00 37.16 2.83
163 164 4.706842 AACTTGGACTATGGTGTCTGTT 57.293 40.909 0.00 0.00 37.16 3.16
164 165 4.102524 TGAAACTTGGACTATGGTGTCTGT 59.897 41.667 0.00 0.00 37.16 3.41
165 166 4.641396 TGAAACTTGGACTATGGTGTCTG 58.359 43.478 0.00 0.00 37.16 3.51
166 167 4.593206 TCTGAAACTTGGACTATGGTGTCT 59.407 41.667 0.00 0.00 37.16 3.41
167 168 4.894784 TCTGAAACTTGGACTATGGTGTC 58.105 43.478 0.00 0.00 36.31 3.67
168 169 4.974645 TCTGAAACTTGGACTATGGTGT 57.025 40.909 0.00 0.00 0.00 4.16
169 170 6.207417 ACAATTCTGAAACTTGGACTATGGTG 59.793 38.462 8.21 0.00 0.00 4.17
170 171 6.207417 CACAATTCTGAAACTTGGACTATGGT 59.793 38.462 8.21 0.00 0.00 3.55
171 172 6.615088 CACAATTCTGAAACTTGGACTATGG 58.385 40.000 8.21 0.00 0.00 2.74
172 173 6.088824 GCACAATTCTGAAACTTGGACTATG 58.911 40.000 8.21 0.13 0.00 2.23
173 174 5.769662 TGCACAATTCTGAAACTTGGACTAT 59.230 36.000 8.21 0.00 0.00 2.12
174 175 5.008613 GTGCACAATTCTGAAACTTGGACTA 59.991 40.000 13.17 0.00 0.00 2.59
175 176 3.953612 TGCACAATTCTGAAACTTGGACT 59.046 39.130 8.21 0.00 0.00 3.85
176 177 4.044426 GTGCACAATTCTGAAACTTGGAC 58.956 43.478 13.17 6.55 0.00 4.02
177 178 3.698539 TGTGCACAATTCTGAAACTTGGA 59.301 39.130 19.28 0.00 0.00 3.53
178 179 3.798337 GTGTGCACAATTCTGAAACTTGG 59.202 43.478 23.59 0.57 0.00 3.61
179 180 4.266029 GTGTGTGCACAATTCTGAAACTTG 59.734 41.667 23.59 0.00 43.77 3.16
180 181 4.423732 GTGTGTGCACAATTCTGAAACTT 58.576 39.130 23.59 0.00 43.77 2.66
181 182 4.032703 GTGTGTGCACAATTCTGAAACT 57.967 40.909 23.59 0.00 43.77 2.66
193 194 3.002246 TCATTTCTTTCGAGTGTGTGCAC 59.998 43.478 10.75 10.75 45.57 4.57
194 195 3.002246 GTCATTTCTTTCGAGTGTGTGCA 59.998 43.478 0.00 0.00 0.00 4.57
195 196 3.248602 AGTCATTTCTTTCGAGTGTGTGC 59.751 43.478 0.00 0.00 0.00 4.57
196 197 6.525121 TTAGTCATTTCTTTCGAGTGTGTG 57.475 37.500 0.00 0.00 0.00 3.82
197 198 5.177696 GCTTAGTCATTTCTTTCGAGTGTGT 59.822 40.000 0.00 0.00 0.00 3.72
198 199 5.389935 GGCTTAGTCATTTCTTTCGAGTGTG 60.390 44.000 0.00 0.00 0.00 3.82
199 200 4.691216 GGCTTAGTCATTTCTTTCGAGTGT 59.309 41.667 0.00 0.00 0.00 3.55
200 201 4.690748 TGGCTTAGTCATTTCTTTCGAGTG 59.309 41.667 0.00 0.00 0.00 3.51
201 202 4.894784 TGGCTTAGTCATTTCTTTCGAGT 58.105 39.130 0.00 0.00 0.00 4.18
202 203 5.862924 TTGGCTTAGTCATTTCTTTCGAG 57.137 39.130 0.00 0.00 0.00 4.04
203 204 5.334879 GCTTTGGCTTAGTCATTTCTTTCGA 60.335 40.000 0.00 0.00 35.22 3.71
204 205 4.853743 GCTTTGGCTTAGTCATTTCTTTCG 59.146 41.667 0.00 0.00 35.22 3.46
205 206 4.853743 CGCTTTGGCTTAGTCATTTCTTTC 59.146 41.667 0.00 0.00 36.09 2.62
206 207 4.278419 ACGCTTTGGCTTAGTCATTTCTTT 59.722 37.500 0.00 0.00 36.09 2.52
207 208 3.821033 ACGCTTTGGCTTAGTCATTTCTT 59.179 39.130 0.00 0.00 36.09 2.52
208 209 3.412386 ACGCTTTGGCTTAGTCATTTCT 58.588 40.909 0.00 0.00 36.09 2.52
209 210 3.831715 ACGCTTTGGCTTAGTCATTTC 57.168 42.857 0.00 0.00 36.09 2.17
210 211 3.305335 CCAACGCTTTGGCTTAGTCATTT 60.305 43.478 9.29 0.00 46.09 2.32
211 212 2.228822 CCAACGCTTTGGCTTAGTCATT 59.771 45.455 9.29 0.00 46.09 2.57
212 213 1.812571 CCAACGCTTTGGCTTAGTCAT 59.187 47.619 9.29 0.00 46.09 3.06
213 214 1.234821 CCAACGCTTTGGCTTAGTCA 58.765 50.000 9.29 0.00 46.09 3.41
222 223 3.845625 GTTGAGGTCCAACGCTTTG 57.154 52.632 0.00 0.00 44.76 2.77
229 230 1.547675 GGCAATCTGGTTGAGGTCCAA 60.548 52.381 4.51 0.00 40.37 3.53
230 231 0.038166 GGCAATCTGGTTGAGGTCCA 59.962 55.000 4.51 0.00 40.37 4.02
231 232 0.038166 TGGCAATCTGGTTGAGGTCC 59.962 55.000 4.51 0.00 40.37 4.46
232 233 2.134789 ATGGCAATCTGGTTGAGGTC 57.865 50.000 4.51 0.00 40.37 3.85
233 234 2.610438 AATGGCAATCTGGTTGAGGT 57.390 45.000 4.51 0.00 40.37 3.85
234 235 4.220382 TGTTTAATGGCAATCTGGTTGAGG 59.780 41.667 4.51 0.00 40.37 3.86
235 236 5.047802 AGTGTTTAATGGCAATCTGGTTGAG 60.048 40.000 4.51 0.00 40.37 3.02
236 237 4.832266 AGTGTTTAATGGCAATCTGGTTGA 59.168 37.500 4.51 0.00 40.37 3.18
237 238 4.925054 CAGTGTTTAATGGCAATCTGGTTG 59.075 41.667 0.00 0.00 40.90 3.77
238 239 4.561326 GCAGTGTTTAATGGCAATCTGGTT 60.561 41.667 0.00 0.00 0.00 3.67
239 240 3.056607 GCAGTGTTTAATGGCAATCTGGT 60.057 43.478 0.00 0.00 0.00 4.00
240 241 3.194116 AGCAGTGTTTAATGGCAATCTGG 59.806 43.478 0.00 0.00 0.00 3.86
241 242 4.082625 TCAGCAGTGTTTAATGGCAATCTG 60.083 41.667 0.00 0.00 0.00 2.90
242 243 4.081406 TCAGCAGTGTTTAATGGCAATCT 58.919 39.130 0.00 0.00 0.00 2.40
243 244 4.439305 TCAGCAGTGTTTAATGGCAATC 57.561 40.909 0.00 0.00 0.00 2.67
244 245 4.870123 TTCAGCAGTGTTTAATGGCAAT 57.130 36.364 0.00 0.00 0.00 3.56
245 246 4.870123 ATTCAGCAGTGTTTAATGGCAA 57.130 36.364 0.00 0.00 0.00 4.52
246 247 4.321899 GGAATTCAGCAGTGTTTAATGGCA 60.322 41.667 7.93 0.00 0.00 4.92
247 248 4.176271 GGAATTCAGCAGTGTTTAATGGC 58.824 43.478 7.93 0.00 0.00 4.40
248 249 5.389859 TGGAATTCAGCAGTGTTTAATGG 57.610 39.130 7.93 0.00 0.00 3.16
249 250 7.894376 ATTTGGAATTCAGCAGTGTTTAATG 57.106 32.000 7.93 0.00 0.00 1.90
250 251 9.423061 GTTATTTGGAATTCAGCAGTGTTTAAT 57.577 29.630 7.93 0.00 0.00 1.40
251 252 7.870445 GGTTATTTGGAATTCAGCAGTGTTTAA 59.130 33.333 7.93 0.00 0.00 1.52
252 253 7.014711 TGGTTATTTGGAATTCAGCAGTGTTTA 59.985 33.333 7.93 0.00 0.00 2.01
253 254 6.183360 TGGTTATTTGGAATTCAGCAGTGTTT 60.183 34.615 7.93 0.00 0.00 2.83
254 255 5.304101 TGGTTATTTGGAATTCAGCAGTGTT 59.696 36.000 7.93 0.00 0.00 3.32
255 256 4.832266 TGGTTATTTGGAATTCAGCAGTGT 59.168 37.500 7.93 0.00 0.00 3.55
256 257 5.183713 TCTGGTTATTTGGAATTCAGCAGTG 59.816 40.000 15.73 0.00 32.74 3.66
257 258 5.324409 TCTGGTTATTTGGAATTCAGCAGT 58.676 37.500 15.73 0.00 32.74 4.40
258 259 5.902613 TCTGGTTATTTGGAATTCAGCAG 57.097 39.130 7.93 10.40 0.00 4.24
259 260 6.855763 ATTCTGGTTATTTGGAATTCAGCA 57.144 33.333 7.93 0.51 0.00 4.41
260 261 7.147915 TGGTATTCTGGTTATTTGGAATTCAGC 60.148 37.037 7.93 0.00 31.89 4.26
261 262 8.190784 GTGGTATTCTGGTTATTTGGAATTCAG 58.809 37.037 7.93 0.00 31.89 3.02
262 263 7.123547 GGTGGTATTCTGGTTATTTGGAATTCA 59.876 37.037 7.93 0.00 31.89 2.57
263 264 7.342026 AGGTGGTATTCTGGTTATTTGGAATTC 59.658 37.037 0.00 0.00 31.89 2.17
264 265 7.124147 CAGGTGGTATTCTGGTTATTTGGAATT 59.876 37.037 0.00 0.00 31.89 2.17
265 266 6.607198 CAGGTGGTATTCTGGTTATTTGGAAT 59.393 38.462 0.00 0.00 33.69 3.01
266 267 5.949354 CAGGTGGTATTCTGGTTATTTGGAA 59.051 40.000 0.00 0.00 0.00 3.53
267 268 5.251932 TCAGGTGGTATTCTGGTTATTTGGA 59.748 40.000 0.00 0.00 0.00 3.53
268 269 5.505780 TCAGGTGGTATTCTGGTTATTTGG 58.494 41.667 0.00 0.00 0.00 3.28
269 270 6.404734 GCTTCAGGTGGTATTCTGGTTATTTG 60.405 42.308 0.00 0.00 0.00 2.32
270 271 5.652452 GCTTCAGGTGGTATTCTGGTTATTT 59.348 40.000 0.00 0.00 0.00 1.40
271 272 5.044846 AGCTTCAGGTGGTATTCTGGTTATT 60.045 40.000 0.00 0.00 0.00 1.40
272 273 4.475016 AGCTTCAGGTGGTATTCTGGTTAT 59.525 41.667 0.00 0.00 0.00 1.89
273 274 3.844211 AGCTTCAGGTGGTATTCTGGTTA 59.156 43.478 0.00 0.00 0.00 2.85
274 275 2.644798 AGCTTCAGGTGGTATTCTGGTT 59.355 45.455 0.00 0.00 0.00 3.67
275 276 2.237392 GAGCTTCAGGTGGTATTCTGGT 59.763 50.000 0.00 0.00 0.00 4.00
276 277 2.420687 GGAGCTTCAGGTGGTATTCTGG 60.421 54.545 0.00 0.00 0.00 3.86
277 278 2.420687 GGGAGCTTCAGGTGGTATTCTG 60.421 54.545 0.00 0.00 0.00 3.02
278 279 1.840635 GGGAGCTTCAGGTGGTATTCT 59.159 52.381 0.00 0.00 0.00 2.40
279 280 1.559682 TGGGAGCTTCAGGTGGTATTC 59.440 52.381 0.00 0.00 0.00 1.75
280 281 1.282157 GTGGGAGCTTCAGGTGGTATT 59.718 52.381 0.00 0.00 0.00 1.89
281 282 0.912486 GTGGGAGCTTCAGGTGGTAT 59.088 55.000 0.00 0.00 0.00 2.73
282 283 0.472925 TGTGGGAGCTTCAGGTGGTA 60.473 55.000 0.00 0.00 0.00 3.25
283 284 1.770110 TGTGGGAGCTTCAGGTGGT 60.770 57.895 0.00 0.00 0.00 4.16
284 285 1.002868 CTGTGGGAGCTTCAGGTGG 60.003 63.158 0.00 0.00 0.00 4.61
285 286 0.397941 TTCTGTGGGAGCTTCAGGTG 59.602 55.000 0.00 0.00 0.00 4.00
286 287 0.689623 CTTCTGTGGGAGCTTCAGGT 59.310 55.000 0.00 0.00 0.00 4.00
287 288 0.035630 CCTTCTGTGGGAGCTTCAGG 60.036 60.000 0.00 0.00 0.00 3.86
288 289 3.547567 CCTTCTGTGGGAGCTTCAG 57.452 57.895 0.00 0.00 0.00 3.02
296 297 1.524008 GCGTTTTCCCCTTCTGTGGG 61.524 60.000 0.00 0.00 46.68 4.61
297 298 0.821711 TGCGTTTTCCCCTTCTGTGG 60.822 55.000 0.00 0.00 0.00 4.17
298 299 1.028905 TTGCGTTTTCCCCTTCTGTG 58.971 50.000 0.00 0.00 0.00 3.66
299 300 1.681264 CTTTGCGTTTTCCCCTTCTGT 59.319 47.619 0.00 0.00 0.00 3.41
300 301 1.602920 GCTTTGCGTTTTCCCCTTCTG 60.603 52.381 0.00 0.00 0.00 3.02
301 302 0.673985 GCTTTGCGTTTTCCCCTTCT 59.326 50.000 0.00 0.00 0.00 2.85
302 303 3.195041 GCTTTGCGTTTTCCCCTTC 57.805 52.632 0.00 0.00 0.00 3.46
314 315 0.297820 CGTAGGTTCGATCGCTTTGC 59.702 55.000 11.09 0.00 0.00 3.68
315 316 0.297820 GCGTAGGTTCGATCGCTTTG 59.702 55.000 11.09 0.00 44.28 2.77
316 317 1.138047 CGCGTAGGTTCGATCGCTTT 61.138 55.000 11.09 0.00 45.25 3.51
317 318 1.585521 CGCGTAGGTTCGATCGCTT 60.586 57.895 11.09 0.00 45.25 4.68
318 319 1.985447 TTCGCGTAGGTTCGATCGCT 61.985 55.000 11.09 4.49 45.25 4.93
319 320 1.584483 TTCGCGTAGGTTCGATCGC 60.584 57.895 11.09 0.00 44.23 4.58
320 321 0.521867 TGTTCGCGTAGGTTCGATCG 60.522 55.000 9.36 9.36 34.48 3.69
321 322 1.621107 TTGTTCGCGTAGGTTCGATC 58.379 50.000 5.77 0.00 34.48 3.69
322 323 2.068837 TTTGTTCGCGTAGGTTCGAT 57.931 45.000 5.77 0.00 34.48 3.59
323 324 1.850377 TTTTGTTCGCGTAGGTTCGA 58.150 45.000 5.77 0.00 0.00 3.71
324 325 2.492001 CATTTTGTTCGCGTAGGTTCG 58.508 47.619 5.77 0.00 0.00 3.95
325 326 2.239201 GCATTTTGTTCGCGTAGGTTC 58.761 47.619 5.77 0.00 0.00 3.62
326 327 1.604755 TGCATTTTGTTCGCGTAGGTT 59.395 42.857 5.77 0.00 0.00 3.50
327 328 1.069500 GTGCATTTTGTTCGCGTAGGT 60.069 47.619 5.77 0.00 0.00 3.08
328 329 1.602191 GTGCATTTTGTTCGCGTAGG 58.398 50.000 5.77 0.00 0.00 3.18
329 330 1.238281 CGTGCATTTTGTTCGCGTAG 58.762 50.000 5.77 0.00 0.00 3.51
330 331 0.582482 ACGTGCATTTTGTTCGCGTA 59.418 45.000 5.77 0.00 43.78 4.42
331 332 0.582482 TACGTGCATTTTGTTCGCGT 59.418 45.000 5.77 5.44 46.59 6.01
332 333 1.831812 GATACGTGCATTTTGTTCGCG 59.168 47.619 0.00 0.00 39.33 5.87
333 334 1.831812 CGATACGTGCATTTTGTTCGC 59.168 47.619 0.00 0.00 0.00 4.70
334 335 3.362281 TCGATACGTGCATTTTGTTCG 57.638 42.857 0.00 0.00 0.00 3.95
335 336 5.143916 AGATCGATACGTGCATTTTGTTC 57.856 39.130 0.00 0.00 0.00 3.18
336 337 4.629634 TGAGATCGATACGTGCATTTTGTT 59.370 37.500 0.00 0.00 0.00 2.83
337 338 4.180817 TGAGATCGATACGTGCATTTTGT 58.819 39.130 0.00 0.00 0.00 2.83
338 339 4.504097 TCTGAGATCGATACGTGCATTTTG 59.496 41.667 0.00 0.00 0.00 2.44
339 340 4.682787 TCTGAGATCGATACGTGCATTTT 58.317 39.130 0.00 0.00 0.00 1.82
340 341 4.307443 TCTGAGATCGATACGTGCATTT 57.693 40.909 0.00 0.00 0.00 2.32
341 342 3.990318 TCTGAGATCGATACGTGCATT 57.010 42.857 0.00 0.00 0.00 3.56
342 343 3.503748 TGATCTGAGATCGATACGTGCAT 59.496 43.478 16.89 0.00 0.00 3.96
343 344 2.878406 TGATCTGAGATCGATACGTGCA 59.122 45.455 16.89 0.00 0.00 4.57
344 345 3.544356 TGATCTGAGATCGATACGTGC 57.456 47.619 16.89 0.00 0.00 5.34
345 346 6.615208 GCATTTTGATCTGAGATCGATACGTG 60.615 42.308 16.89 11.89 0.00 4.49
346 347 5.403766 GCATTTTGATCTGAGATCGATACGT 59.596 40.000 16.89 0.00 0.00 3.57
347 348 5.632764 AGCATTTTGATCTGAGATCGATACG 59.367 40.000 16.89 5.08 0.00 3.06
348 349 6.183359 CGAGCATTTTGATCTGAGATCGATAC 60.183 42.308 16.89 6.66 29.10 2.24
349 350 5.860716 CGAGCATTTTGATCTGAGATCGATA 59.139 40.000 16.89 11.03 29.10 2.92
350 351 4.685165 CGAGCATTTTGATCTGAGATCGAT 59.315 41.667 16.89 0.00 29.10 3.59
351 352 4.047142 CGAGCATTTTGATCTGAGATCGA 58.953 43.478 16.89 12.83 29.10 3.59
352 353 4.047142 TCGAGCATTTTGATCTGAGATCG 58.953 43.478 16.89 4.16 29.10 3.69
353 354 4.210955 GGTCGAGCATTTTGATCTGAGATC 59.789 45.833 15.36 15.36 29.10 2.75
354 355 4.125703 GGTCGAGCATTTTGATCTGAGAT 58.874 43.478 10.30 0.00 29.10 2.75
355 356 3.196469 AGGTCGAGCATTTTGATCTGAGA 59.804 43.478 18.15 0.00 28.92 3.27
356 357 3.529533 AGGTCGAGCATTTTGATCTGAG 58.470 45.455 18.15 0.00 28.92 3.35
357 358 3.616956 AGGTCGAGCATTTTGATCTGA 57.383 42.857 18.15 0.00 28.92 3.27
358 359 3.181503 CCAAGGTCGAGCATTTTGATCTG 60.182 47.826 18.15 0.00 30.64 2.90
359 360 3.012518 CCAAGGTCGAGCATTTTGATCT 58.987 45.455 18.15 0.00 31.53 2.75
360 361 2.749621 ACCAAGGTCGAGCATTTTGATC 59.250 45.455 18.15 0.00 0.00 2.92
361 362 2.795329 ACCAAGGTCGAGCATTTTGAT 58.205 42.857 18.15 0.00 0.00 2.57
362 363 2.270352 ACCAAGGTCGAGCATTTTGA 57.730 45.000 18.15 0.00 0.00 2.69
363 364 3.004734 AGAAACCAAGGTCGAGCATTTTG 59.995 43.478 18.15 12.26 0.00 2.44
364 365 3.222603 AGAAACCAAGGTCGAGCATTTT 58.777 40.909 18.15 9.58 0.00 1.82
365 366 2.863809 AGAAACCAAGGTCGAGCATTT 58.136 42.857 18.15 11.08 0.00 2.32
366 367 2.554032 CAAGAAACCAAGGTCGAGCATT 59.446 45.455 18.15 5.48 0.00 3.56
367 368 2.154462 CAAGAAACCAAGGTCGAGCAT 58.846 47.619 18.15 0.84 0.00 3.79
368 369 1.593196 CAAGAAACCAAGGTCGAGCA 58.407 50.000 18.15 0.00 0.00 4.26
369 370 0.238553 GCAAGAAACCAAGGTCGAGC 59.761 55.000 6.48 6.48 0.00 5.03
370 371 1.532868 CTGCAAGAAACCAAGGTCGAG 59.467 52.381 0.00 0.00 34.07 4.04
371 372 1.140052 TCTGCAAGAAACCAAGGTCGA 59.860 47.619 0.00 0.00 42.31 4.20
372 373 1.593196 TCTGCAAGAAACCAAGGTCG 58.407 50.000 0.00 0.00 42.31 4.79
383 384 8.833493 CAAATGTTCTATCATATGTCTGCAAGA 58.167 33.333 1.90 0.00 43.69 3.02
384 385 7.590322 GCAAATGTTCTATCATATGTCTGCAAG 59.410 37.037 1.90 0.00 0.00 4.01
385 386 7.283807 AGCAAATGTTCTATCATATGTCTGCAA 59.716 33.333 1.90 0.00 0.00 4.08
386 387 6.769341 AGCAAATGTTCTATCATATGTCTGCA 59.231 34.615 1.90 0.00 0.00 4.41
387 388 7.199541 AGCAAATGTTCTATCATATGTCTGC 57.800 36.000 1.90 0.00 0.00 4.26
388 389 9.661187 GAAAGCAAATGTTCTATCATATGTCTG 57.339 33.333 1.90 0.00 0.00 3.51
389 390 9.624373 AGAAAGCAAATGTTCTATCATATGTCT 57.376 29.630 1.90 0.00 32.29 3.41
396 397 9.985730 AAATTGAAGAAAGCAAATGTTCTATCA 57.014 25.926 0.00 0.00 32.90 2.15
400 401 8.768019 GCTAAAATTGAAGAAAGCAAATGTTCT 58.232 29.630 0.00 0.00 35.59 3.01
401 402 8.768019 AGCTAAAATTGAAGAAAGCAAATGTTC 58.232 29.630 0.00 0.00 32.42 3.18
402 403 8.667076 AGCTAAAATTGAAGAAAGCAAATGTT 57.333 26.923 0.00 0.00 32.42 2.71
403 404 7.115378 CGAGCTAAAATTGAAGAAAGCAAATGT 59.885 33.333 0.00 0.00 32.42 2.71
404 405 7.411157 CCGAGCTAAAATTGAAGAAAGCAAATG 60.411 37.037 0.00 0.00 32.42 2.32
405 406 6.587608 CCGAGCTAAAATTGAAGAAAGCAAAT 59.412 34.615 0.00 0.00 32.42 2.32
406 407 5.920273 CCGAGCTAAAATTGAAGAAAGCAAA 59.080 36.000 0.00 0.00 32.42 3.68
407 408 5.240623 TCCGAGCTAAAATTGAAGAAAGCAA 59.759 36.000 0.00 0.00 32.42 3.91
408 409 4.759693 TCCGAGCTAAAATTGAAGAAAGCA 59.240 37.500 0.00 0.00 32.42 3.91
409 410 5.089411 GTCCGAGCTAAAATTGAAGAAAGC 58.911 41.667 0.00 0.00 0.00 3.51
410 411 6.241207 TGTCCGAGCTAAAATTGAAGAAAG 57.759 37.500 0.00 0.00 0.00 2.62
411 412 6.128007 GGATGTCCGAGCTAAAATTGAAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
412 413 5.354234 GGATGTCCGAGCTAAAATTGAAGAA 59.646 40.000 0.00 0.00 0.00 2.52
413 414 4.876107 GGATGTCCGAGCTAAAATTGAAGA 59.124 41.667 0.00 0.00 0.00 2.87
414 415 4.035675 GGGATGTCCGAGCTAAAATTGAAG 59.964 45.833 0.00 0.00 36.71 3.02
415 416 3.945285 GGGATGTCCGAGCTAAAATTGAA 59.055 43.478 0.00 0.00 36.71 2.69
416 417 3.199946 AGGGATGTCCGAGCTAAAATTGA 59.800 43.478 0.00 0.00 41.52 2.57
417 418 3.545703 AGGGATGTCCGAGCTAAAATTG 58.454 45.455 0.00 0.00 41.52 2.32
418 419 3.933861 AGGGATGTCCGAGCTAAAATT 57.066 42.857 0.00 0.00 41.52 1.82
419 420 3.933861 AAGGGATGTCCGAGCTAAAAT 57.066 42.857 0.00 0.00 41.52 1.82
420 421 3.343617 CAAAGGGATGTCCGAGCTAAAA 58.656 45.455 0.00 0.00 41.52 1.52
421 422 2.939640 GCAAAGGGATGTCCGAGCTAAA 60.940 50.000 0.00 0.00 41.52 1.85
422 423 1.406887 GCAAAGGGATGTCCGAGCTAA 60.407 52.381 0.00 0.00 41.52 3.09
423 424 0.178068 GCAAAGGGATGTCCGAGCTA 59.822 55.000 0.00 0.00 41.52 3.32
424 425 1.078143 GCAAAGGGATGTCCGAGCT 60.078 57.895 0.00 0.00 41.52 4.09
425 426 2.115291 GGCAAAGGGATGTCCGAGC 61.115 63.158 0.00 0.00 41.52 5.03
426 427 0.745845 CAGGCAAAGGGATGTCCGAG 60.746 60.000 0.00 0.00 41.52 4.63
427 428 1.299648 CAGGCAAAGGGATGTCCGA 59.700 57.895 0.00 0.00 41.52 4.55
428 429 1.002134 ACAGGCAAAGGGATGTCCG 60.002 57.895 0.00 0.00 41.52 4.79
429 430 2.873797 GACAGGCAAAGGGATGTCC 58.126 57.895 0.00 0.00 36.83 4.02
430 431 0.329596 AGGACAGGCAAAGGGATGTC 59.670 55.000 0.00 0.00 41.03 3.06
431 432 0.329596 GAGGACAGGCAAAGGGATGT 59.670 55.000 0.00 0.00 0.00 3.06
432 433 0.329261 TGAGGACAGGCAAAGGGATG 59.671 55.000 0.00 0.00 0.00 3.51
433 434 0.622665 CTGAGGACAGGCAAAGGGAT 59.377 55.000 0.00 0.00 40.14 3.85
434 435 0.473694 TCTGAGGACAGGCAAAGGGA 60.474 55.000 0.00 0.00 43.60 4.20
435 436 0.035630 CTCTGAGGACAGGCAAAGGG 60.036 60.000 0.00 0.00 43.60 3.95
436 437 0.689623 ACTCTGAGGACAGGCAAAGG 59.310 55.000 9.85 0.00 43.60 3.11
437 438 2.224378 TGAACTCTGAGGACAGGCAAAG 60.224 50.000 9.85 0.00 43.60 2.77
438 439 1.768275 TGAACTCTGAGGACAGGCAAA 59.232 47.619 9.85 0.00 43.60 3.68
439 440 1.345741 CTGAACTCTGAGGACAGGCAA 59.654 52.381 18.71 0.00 43.60 4.52
440 441 0.972134 CTGAACTCTGAGGACAGGCA 59.028 55.000 18.71 5.02 43.60 4.75
441 442 0.248843 CCTGAACTCTGAGGACAGGC 59.751 60.000 26.66 6.61 43.60 4.85
443 444 0.248843 GGCCTGAACTCTGAGGACAG 59.751 60.000 19.20 19.20 44.66 3.51
444 445 0.471780 TGGCCTGAACTCTGAGGACA 60.472 55.000 9.85 7.62 45.78 4.02
445 446 0.036858 GTGGCCTGAACTCTGAGGAC 60.037 60.000 9.85 3.24 37.97 3.85
446 447 1.536073 CGTGGCCTGAACTCTGAGGA 61.536 60.000 9.85 0.00 0.00 3.71
447 448 1.079543 CGTGGCCTGAACTCTGAGG 60.080 63.158 9.85 0.00 0.00 3.86
448 449 1.739562 GCGTGGCCTGAACTCTGAG 60.740 63.158 3.32 2.45 0.00 3.35
449 450 2.343758 GCGTGGCCTGAACTCTGA 59.656 61.111 3.32 0.00 0.00 3.27
450 451 2.031012 TGCGTGGCCTGAACTCTG 59.969 61.111 3.32 0.00 0.00 3.35
451 452 2.031163 GTGCGTGGCCTGAACTCT 59.969 61.111 3.32 0.00 0.00 3.24
452 453 1.237285 AATGTGCGTGGCCTGAACTC 61.237 55.000 3.32 0.00 0.00 3.01
453 454 1.228245 AATGTGCGTGGCCTGAACT 60.228 52.632 3.32 0.00 0.00 3.01
454 455 1.210155 GAATGTGCGTGGCCTGAAC 59.790 57.895 3.32 1.34 0.00 3.18
455 456 1.971167 GGAATGTGCGTGGCCTGAA 60.971 57.895 3.32 0.00 0.00 3.02
456 457 2.359850 GGAATGTGCGTGGCCTGA 60.360 61.111 3.32 0.00 0.00 3.86
457 458 2.672651 TGGAATGTGCGTGGCCTG 60.673 61.111 3.32 0.00 0.00 4.85
458 459 2.360350 CTGGAATGTGCGTGGCCT 60.360 61.111 3.32 0.00 0.00 5.19
459 460 4.120331 GCTGGAATGTGCGTGGCC 62.120 66.667 0.00 0.00 0.00 5.36
460 461 4.465512 CGCTGGAATGTGCGTGGC 62.466 66.667 0.00 0.00 46.09 5.01
465 466 3.764885 AATTAACTCGCTGGAATGTGC 57.235 42.857 0.00 0.00 0.00 4.57
466 467 5.560148 GTGTAATTAACTCGCTGGAATGTG 58.440 41.667 0.00 0.00 0.00 3.21
467 468 4.328983 CGTGTAATTAACTCGCTGGAATGT 59.671 41.667 0.00 0.00 38.15 2.71
468 469 4.565166 TCGTGTAATTAACTCGCTGGAATG 59.435 41.667 0.00 0.00 43.12 2.67
469 470 4.751060 TCGTGTAATTAACTCGCTGGAAT 58.249 39.130 0.00 0.00 43.12 3.01
470 471 4.177165 TCGTGTAATTAACTCGCTGGAA 57.823 40.909 0.00 0.00 43.12 3.53
471 472 3.853831 TCGTGTAATTAACTCGCTGGA 57.146 42.857 0.00 0.00 43.12 3.86
472 473 5.279384 ACTATCGTGTAATTAACTCGCTGG 58.721 41.667 0.00 0.00 43.12 4.85
641 642 2.046988 CCAGCGTGGCATCTGACA 60.047 61.111 17.66 0.00 32.26 3.58
848 849 4.314440 GGCAGGCTGGACGTGTCA 62.314 66.667 17.64 0.00 38.63 3.58
1164 1165 7.455953 TCCCACTATCAGCATAGAATTCATACT 59.544 37.037 8.44 0.00 36.25 2.12
2311 2316 8.621532 ACATACACAGACATAGTTCACAATTT 57.378 30.769 0.00 0.00 0.00 1.82
2832 3467 6.070078 ACGGAACCACCTTAATCTAACCATTA 60.070 38.462 0.00 0.00 36.31 1.90
2833 3468 5.190677 CGGAACCACCTTAATCTAACCATT 58.809 41.667 0.00 0.00 36.31 3.16
2834 3469 4.226620 ACGGAACCACCTTAATCTAACCAT 59.773 41.667 0.00 0.00 36.31 3.55
2835 3470 3.583966 ACGGAACCACCTTAATCTAACCA 59.416 43.478 0.00 0.00 36.31 3.67
2836 3471 4.186926 GACGGAACCACCTTAATCTAACC 58.813 47.826 0.00 0.00 36.31 2.85
2837 3472 3.861689 CGACGGAACCACCTTAATCTAAC 59.138 47.826 0.00 0.00 36.31 2.34
2838 3473 3.763360 TCGACGGAACCACCTTAATCTAA 59.237 43.478 0.00 0.00 36.31 2.10
2839 3474 3.129287 GTCGACGGAACCACCTTAATCTA 59.871 47.826 0.00 0.00 36.31 1.98
2840 3475 2.094338 GTCGACGGAACCACCTTAATCT 60.094 50.000 0.00 0.00 36.31 2.40
2841 3476 2.265683 GTCGACGGAACCACCTTAATC 58.734 52.381 0.00 0.00 36.31 1.75
2842 3477 1.066645 GGTCGACGGAACCACCTTAAT 60.067 52.381 9.92 0.00 36.31 1.40
2843 3478 0.318120 GGTCGACGGAACCACCTTAA 59.682 55.000 9.92 0.00 36.31 1.85
2844 3479 1.966762 GGTCGACGGAACCACCTTA 59.033 57.895 9.92 0.00 36.31 2.69
2845 3480 2.739132 GGTCGACGGAACCACCTT 59.261 61.111 9.92 0.00 36.31 3.50
2851 3486 2.493501 GCTAGGGGTCGACGGAAC 59.506 66.667 9.92 0.00 0.00 3.62
2852 3487 2.757099 GGCTAGGGGTCGACGGAA 60.757 66.667 9.92 0.00 0.00 4.30
2853 3488 4.051167 TGGCTAGGGGTCGACGGA 62.051 66.667 9.92 0.00 0.00 4.69
2854 3489 3.834799 GTGGCTAGGGGTCGACGG 61.835 72.222 9.92 0.00 0.00 4.79
2855 3490 3.834799 GGTGGCTAGGGGTCGACG 61.835 72.222 9.92 0.00 0.00 5.12
2856 3491 0.757935 TATGGTGGCTAGGGGTCGAC 60.758 60.000 7.13 7.13 0.00 4.20
2857 3492 0.031917 TTATGGTGGCTAGGGGTCGA 60.032 55.000 0.00 0.00 0.00 4.20
2858 3493 0.834612 TTTATGGTGGCTAGGGGTCG 59.165 55.000 0.00 0.00 0.00 4.79
2859 3494 1.133884 GGTTTATGGTGGCTAGGGGTC 60.134 57.143 0.00 0.00 0.00 4.46
2860 3495 0.924090 GGTTTATGGTGGCTAGGGGT 59.076 55.000 0.00 0.00 0.00 4.95
2861 3496 0.185175 GGGTTTATGGTGGCTAGGGG 59.815 60.000 0.00 0.00 0.00 4.79
2862 3497 1.222567 AGGGTTTATGGTGGCTAGGG 58.777 55.000 0.00 0.00 0.00 3.53
2863 3498 4.398319 CATTAGGGTTTATGGTGGCTAGG 58.602 47.826 0.00 0.00 0.00 3.02
2864 3499 4.398319 CCATTAGGGTTTATGGTGGCTAG 58.602 47.826 0.00 0.00 37.19 3.42
2865 3500 4.447138 CCATTAGGGTTTATGGTGGCTA 57.553 45.455 0.00 0.00 37.19 3.93
2866 3501 3.312736 CCATTAGGGTTTATGGTGGCT 57.687 47.619 0.00 0.00 37.19 4.75
2880 3515 7.387119 GGAACCAACTTAACCTAACCATTAG 57.613 40.000 0.00 0.00 0.00 1.73
2900 3535 2.433146 GGCTAGGGGTCGAGGGAAC 61.433 68.421 0.00 0.00 0.00 3.62
2901 3536 2.042230 GGCTAGGGGTCGAGGGAA 60.042 66.667 0.00 0.00 0.00 3.97
2902 3537 3.352748 TGGCTAGGGGTCGAGGGA 61.353 66.667 0.00 0.00 0.00 4.20
2903 3538 3.155167 GTGGCTAGGGGTCGAGGG 61.155 72.222 0.00 0.00 0.00 4.30
2904 3539 3.155167 GGTGGCTAGGGGTCGAGG 61.155 72.222 0.00 0.00 0.00 4.63
2905 3540 0.469331 TATGGTGGCTAGGGGTCGAG 60.469 60.000 0.00 0.00 0.00 4.04
2906 3541 0.031917 TTATGGTGGCTAGGGGTCGA 60.032 55.000 0.00 0.00 0.00 4.20
2907 3542 0.834612 TTTATGGTGGCTAGGGGTCG 59.165 55.000 0.00 0.00 0.00 4.79
2908 3543 1.133884 GGTTTATGGTGGCTAGGGGTC 60.134 57.143 0.00 0.00 0.00 4.46
2909 3544 0.924090 GGTTTATGGTGGCTAGGGGT 59.076 55.000 0.00 0.00 0.00 4.95
2910 3545 0.185175 GGGTTTATGGTGGCTAGGGG 59.815 60.000 0.00 0.00 0.00 4.79
2911 3546 1.222567 AGGGTTTATGGTGGCTAGGG 58.777 55.000 0.00 0.00 0.00 3.53
2912 3547 4.398319 CATTAGGGTTTATGGTGGCTAGG 58.602 47.826 0.00 0.00 0.00 3.02
2913 3548 4.398319 CCATTAGGGTTTATGGTGGCTAG 58.602 47.826 0.00 0.00 37.19 3.42
2914 3549 4.447138 CCATTAGGGTTTATGGTGGCTA 57.553 45.455 0.00 0.00 37.19 3.93
2915 3550 3.312736 CCATTAGGGTTTATGGTGGCT 57.687 47.619 0.00 0.00 37.19 4.75
2927 3562 6.262056 ACCACCTTAATCTAACCATTAGGG 57.738 41.667 0.00 0.97 40.02 3.53
2928 3563 6.771267 GGAACCACCTTAATCTAACCATTAGG 59.229 42.308 0.00 0.00 36.94 2.69
2929 3564 6.482308 CGGAACCACCTTAATCTAACCATTAG 59.518 42.308 0.00 0.00 36.31 1.73
2971 3606 5.258051 TGGGTGGATAACTTGATGGTTTAC 58.742 41.667 0.00 0.00 0.00 2.01
3119 3808 8.613060 ATGATACATTGTGCCACTATTTAGAG 57.387 34.615 0.00 0.00 0.00 2.43
3120 3809 8.210265 TGATGATACATTGTGCCACTATTTAGA 58.790 33.333 0.00 0.00 0.00 2.10
3121 3810 8.382030 TGATGATACATTGTGCCACTATTTAG 57.618 34.615 0.00 0.00 0.00 1.85
3122 3811 7.041167 GCTGATGATACATTGTGCCACTATTTA 60.041 37.037 0.00 0.00 0.00 1.40
3125 3814 4.758674 GCTGATGATACATTGTGCCACTAT 59.241 41.667 0.00 0.00 0.00 2.12
3126 3815 4.129380 GCTGATGATACATTGTGCCACTA 58.871 43.478 0.00 0.00 0.00 2.74
3128 3817 2.684374 TGCTGATGATACATTGTGCCAC 59.316 45.455 0.00 0.00 0.00 5.01
3129 3818 3.002038 TGCTGATGATACATTGTGCCA 57.998 42.857 0.00 0.00 0.00 4.92
3130 3819 3.129113 TGTTGCTGATGATACATTGTGCC 59.871 43.478 0.00 0.00 0.00 5.01
3165 3854 9.558396 ACAATGTGATTTATTTTGGTTTGATGT 57.442 25.926 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.