Multiple sequence alignment - TraesCS5B01G166600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G166600 chr5B 100.000 3827 0 0 1 3827 308790181 308794007 0.000000e+00 7068.0
1 TraesCS5B01G166600 chr5B 97.391 345 9 0 1 345 308758494 308758838 4.260000e-164 588.0
2 TraesCS5B01G166600 chr5B 93.966 348 12 5 1 345 512219818 512220159 5.670000e-143 518.0
3 TraesCS5B01G166600 chr5B 100.000 124 0 0 2995 3118 53657050 53657173 2.970000e-56 230.0
4 TraesCS5B01G166600 chr5B 99.213 127 0 1 2995 3121 458934504 458934379 1.070000e-55 228.0
5 TraesCS5B01G166600 chr5B 88.276 145 17 0 1244 1388 43884298 43884442 1.410000e-39 174.0
6 TraesCS5B01G166600 chr5B 86.624 157 21 0 1244 1400 44231459 44231303 1.410000e-39 174.0
7 TraesCS5B01G166600 chr5D 95.614 2645 95 14 340 2974 273059747 273062380 0.000000e+00 4222.0
8 TraesCS5B01G166600 chr5D 90.694 720 24 14 3116 3827 273062366 273063050 0.000000e+00 918.0
9 TraesCS5B01G166600 chr5D 72.185 737 157 32 2097 2821 80300591 80301291 8.450000e-42 182.0
10 TraesCS5B01G166600 chr5D 88.276 145 17 0 1244 1388 44488974 44489118 1.410000e-39 174.0
11 TraesCS5B01G166600 chr5D 77.835 194 40 3 432 624 344891262 344891071 2.420000e-22 117.0
12 TraesCS5B01G166600 chr5A 96.771 2075 59 2 906 2972 362376543 362378617 0.000000e+00 3454.0
13 TraesCS5B01G166600 chr5A 93.400 500 24 3 3330 3827 362378911 362379403 0.000000e+00 732.0
14 TraesCS5B01G166600 chr5A 92.273 220 12 2 3116 3331 362378605 362378823 1.340000e-79 307.0
15 TraesCS5B01G166600 chr5A 100.000 124 0 0 2995 3118 10041762 10041885 2.970000e-56 230.0
16 TraesCS5B01G166600 chr5A 100.000 124 0 0 2991 3114 104599305 104599182 2.970000e-56 230.0
17 TraesCS5B01G166600 chr5A 87.586 145 18 0 1244 1388 34903678 34903822 6.580000e-38 169.0
18 TraesCS5B01G166600 chr5A 86.517 89 11 1 484 572 31282944 31283031 3.150000e-16 97.1
19 TraesCS5B01G166600 chr5A 95.652 46 1 1 760 804 362376143 362376188 5.300000e-09 73.1
20 TraesCS5B01G166600 chr6B 94.220 346 14 4 1 345 555838481 555838821 1.220000e-144 523.0
21 TraesCS5B01G166600 chr6B 93.064 346 20 3 1 345 422685887 422686229 1.590000e-138 503.0
22 TraesCS5B01G166600 chr6B 93.084 347 19 5 1 345 555815541 555815198 1.590000e-138 503.0
23 TraesCS5B01G166600 chr6B 92.877 351 18 4 1 345 633183721 633184070 1.590000e-138 503.0
24 TraesCS5B01G166600 chr2B 95.950 321 12 1 31 351 668454886 668454567 1.580000e-143 520.0
25 TraesCS5B01G166600 chr2B 100.000 126 0 0 2995 3120 763841147 763841272 2.300000e-57 233.0
26 TraesCS5B01G166600 chr3B 92.550 349 22 4 1 345 526760699 526761047 7.380000e-137 497.0
27 TraesCS5B01G166600 chr4B 92.571 350 17 5 3 345 443025826 443026173 9.550000e-136 494.0
28 TraesCS5B01G166600 chr4B 96.992 133 2 1 2995 3127 408852281 408852151 4.980000e-54 222.0
29 TraesCS5B01G166600 chr2A 99.219 128 1 0 2995 3122 644083433 644083306 8.270000e-57 231.0
30 TraesCS5B01G166600 chr2A 100.000 124 0 0 2995 3118 739447428 739447305 2.970000e-56 230.0
31 TraesCS5B01G166600 chr2A 79.675 123 24 1 490 611 549981886 549981764 1.890000e-13 87.9
32 TraesCS5B01G166600 chr6A 100.000 121 0 0 2995 3115 310143812 310143932 1.380000e-54 224.0
33 TraesCS5B01G166600 chr7B 88.060 134 16 0 1247 1380 699372091 699372224 3.960000e-35 159.0
34 TraesCS5B01G166600 chrUn 83.636 165 26 1 1225 1389 65786935 65786772 1.840000e-33 154.0
35 TraesCS5B01G166600 chr7D 87.313 134 17 0 1247 1380 610782548 610782415 1.840000e-33 154.0
36 TraesCS5B01G166600 chr7D 86.207 58 8 0 515 572 256185278 256185335 3.190000e-06 63.9
37 TraesCS5B01G166600 chr2D 79.904 209 37 5 431 637 545846597 545846392 8.570000e-32 148.0
38 TraesCS5B01G166600 chr2D 80.899 89 16 1 485 572 54108901 54108813 6.860000e-08 69.4
39 TraesCS5B01G166600 chr6D 86.765 68 7 2 480 546 6768432 6768366 1.470000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G166600 chr5B 308790181 308794007 3826 False 7068.000 7068 100.000 1 3827 1 chr5B.!!$F4 3826
1 TraesCS5B01G166600 chr5D 273059747 273063050 3303 False 2570.000 4222 93.154 340 3827 2 chr5D.!!$F3 3487
2 TraesCS5B01G166600 chr5A 362376143 362379403 3260 False 1141.525 3454 94.524 760 3827 4 chr5A.!!$F4 3067

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 202 0.035439 ACAATGGTGGCCCGAACTAG 60.035 55.0 0.00 0.00 0.00 2.57 F
259 260 0.102481 TTAGATCCTTGCGAGGCGAC 59.898 55.0 16.01 8.73 43.21 5.19 F
313 314 0.108945 CGTACCCCAGAGTTCGAACC 60.109 60.0 24.22 15.46 32.95 3.62 F
1747 2012 0.109086 CCGCATCACAGAGTTCTCGT 60.109 55.0 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1914 2179 1.072965 AGCAACCTCTCAAGACAAGGG 59.927 52.381 0.00 0.0 34.31 3.95 R
2077 2342 2.418746 CGAACATGGGAAGACGATCCTT 60.419 50.000 0.00 0.0 39.57 3.36 R
2261 2526 5.535030 TCTGTACAGCTAAAGTCTTGACTGA 59.465 40.000 18.45 0.0 0.00 3.41 R
3016 3282 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.0 0.00 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.848678 ATAGGACTAGCCACCACAGA 57.151 50.000 6.07 0.00 40.02 3.41
20 21 2.145397 TAGGACTAGCCACCACAGAG 57.855 55.000 6.07 0.00 40.02 3.35
21 22 0.115349 AGGACTAGCCACCACAGAGT 59.885 55.000 6.07 0.00 40.02 3.24
22 23 1.358103 AGGACTAGCCACCACAGAGTA 59.642 52.381 6.07 0.00 40.02 2.59
23 24 1.751924 GGACTAGCCACCACAGAGTAG 59.248 57.143 0.00 0.00 36.34 2.57
24 25 1.751924 GACTAGCCACCACAGAGTAGG 59.248 57.143 0.00 0.00 0.00 3.18
25 26 1.358103 ACTAGCCACCACAGAGTAGGA 59.642 52.381 0.00 0.00 0.00 2.94
26 27 2.028130 CTAGCCACCACAGAGTAGGAG 58.972 57.143 0.00 0.00 0.00 3.69
27 28 0.616111 AGCCACCACAGAGTAGGAGG 60.616 60.000 0.00 0.00 38.51 4.30
28 29 1.617947 GCCACCACAGAGTAGGAGGG 61.618 65.000 0.00 0.00 36.31 4.30
29 30 0.041238 CCACCACAGAGTAGGAGGGA 59.959 60.000 0.00 0.00 32.67 4.20
30 31 1.552486 CCACCACAGAGTAGGAGGGAA 60.552 57.143 0.00 0.00 32.67 3.97
31 32 2.257207 CACCACAGAGTAGGAGGGAAA 58.743 52.381 0.00 0.00 0.00 3.13
32 33 2.637872 CACCACAGAGTAGGAGGGAAAA 59.362 50.000 0.00 0.00 0.00 2.29
33 34 2.907042 ACCACAGAGTAGGAGGGAAAAG 59.093 50.000 0.00 0.00 0.00 2.27
34 35 3.173965 CCACAGAGTAGGAGGGAAAAGA 58.826 50.000 0.00 0.00 0.00 2.52
35 36 3.196685 CCACAGAGTAGGAGGGAAAAGAG 59.803 52.174 0.00 0.00 0.00 2.85
36 37 3.196685 CACAGAGTAGGAGGGAAAAGAGG 59.803 52.174 0.00 0.00 0.00 3.69
37 38 3.077695 ACAGAGTAGGAGGGAAAAGAGGA 59.922 47.826 0.00 0.00 0.00 3.71
38 39 3.449377 CAGAGTAGGAGGGAAAAGAGGAC 59.551 52.174 0.00 0.00 0.00 3.85
39 40 3.077695 AGAGTAGGAGGGAAAAGAGGACA 59.922 47.826 0.00 0.00 0.00 4.02
40 41 3.174779 AGTAGGAGGGAAAAGAGGACAC 58.825 50.000 0.00 0.00 0.00 3.67
41 42 1.363246 AGGAGGGAAAAGAGGACACC 58.637 55.000 0.00 0.00 0.00 4.16
42 43 1.064825 GGAGGGAAAAGAGGACACCA 58.935 55.000 0.00 0.00 0.00 4.17
43 44 1.003696 GGAGGGAAAAGAGGACACCAG 59.996 57.143 0.00 0.00 0.00 4.00
44 45 1.978580 GAGGGAAAAGAGGACACCAGA 59.021 52.381 0.00 0.00 0.00 3.86
45 46 2.573915 GAGGGAAAAGAGGACACCAGAT 59.426 50.000 0.00 0.00 0.00 2.90
46 47 2.573915 AGGGAAAAGAGGACACCAGATC 59.426 50.000 0.00 0.00 0.00 2.75
47 48 2.356227 GGGAAAAGAGGACACCAGATCC 60.356 54.545 0.00 0.00 36.38 3.36
48 49 2.622436 GAAAAGAGGACACCAGATCCG 58.378 52.381 0.00 0.00 41.52 4.18
49 50 0.905357 AAAGAGGACACCAGATCCGG 59.095 55.000 0.00 0.00 41.52 5.14
50 51 0.041238 AAGAGGACACCAGATCCGGA 59.959 55.000 6.61 6.61 41.52 5.14
51 52 0.263172 AGAGGACACCAGATCCGGAT 59.737 55.000 19.21 19.21 41.52 4.18
52 53 1.123928 GAGGACACCAGATCCGGATT 58.876 55.000 20.22 5.84 41.52 3.01
53 54 1.069358 GAGGACACCAGATCCGGATTC 59.931 57.143 20.22 10.75 41.52 2.52
54 55 0.830648 GGACACCAGATCCGGATTCA 59.169 55.000 20.22 0.00 0.00 2.57
55 56 1.209504 GGACACCAGATCCGGATTCAA 59.790 52.381 20.22 0.00 0.00 2.69
56 57 2.158755 GGACACCAGATCCGGATTCAAT 60.159 50.000 20.22 2.18 0.00 2.57
57 58 3.134458 GACACCAGATCCGGATTCAATC 58.866 50.000 20.22 6.09 0.00 2.67
58 59 2.158755 ACACCAGATCCGGATTCAATCC 60.159 50.000 20.22 6.32 46.22 3.01
69 70 3.560105 GGATTCAATCCTTCCCAAGAGG 58.440 50.000 9.43 0.00 46.19 3.69
70 71 2.514458 TTCAATCCTTCCCAAGAGGC 57.486 50.000 0.00 0.00 34.17 4.70
71 72 1.371467 TCAATCCTTCCCAAGAGGCA 58.629 50.000 0.00 0.00 34.17 4.75
72 73 1.925255 TCAATCCTTCCCAAGAGGCAT 59.075 47.619 0.00 0.00 34.17 4.40
73 74 2.092212 TCAATCCTTCCCAAGAGGCATC 60.092 50.000 0.00 0.00 34.17 3.91
74 75 1.600058 ATCCTTCCCAAGAGGCATCA 58.400 50.000 0.00 0.00 34.17 3.07
75 76 0.620556 TCCTTCCCAAGAGGCATCAC 59.379 55.000 0.00 0.00 34.17 3.06
76 77 0.394899 CCTTCCCAAGAGGCATCACC 60.395 60.000 0.00 0.00 39.61 4.02
86 87 3.650647 GGCATCACCTCCACAAGAA 57.349 52.632 0.00 0.00 34.51 2.52
87 88 1.168714 GGCATCACCTCCACAAGAAC 58.831 55.000 0.00 0.00 34.51 3.01
88 89 1.271597 GGCATCACCTCCACAAGAACT 60.272 52.381 0.00 0.00 34.51 3.01
89 90 2.079925 GCATCACCTCCACAAGAACTC 58.920 52.381 0.00 0.00 0.00 3.01
90 91 2.704572 CATCACCTCCACAAGAACTCC 58.295 52.381 0.00 0.00 0.00 3.85
91 92 2.103153 TCACCTCCACAAGAACTCCT 57.897 50.000 0.00 0.00 0.00 3.69
92 93 1.971357 TCACCTCCACAAGAACTCCTC 59.029 52.381 0.00 0.00 0.00 3.71
93 94 1.002544 CACCTCCACAAGAACTCCTCC 59.997 57.143 0.00 0.00 0.00 4.30
94 95 0.615850 CCTCCACAAGAACTCCTCCC 59.384 60.000 0.00 0.00 0.00 4.30
95 96 0.615850 CTCCACAAGAACTCCTCCCC 59.384 60.000 0.00 0.00 0.00 4.81
96 97 0.193574 TCCACAAGAACTCCTCCCCT 59.806 55.000 0.00 0.00 0.00 4.79
97 98 0.615850 CCACAAGAACTCCTCCCCTC 59.384 60.000 0.00 0.00 0.00 4.30
98 99 0.247736 CACAAGAACTCCTCCCCTCG 59.752 60.000 0.00 0.00 0.00 4.63
99 100 1.219393 CAAGAACTCCTCCCCTCGC 59.781 63.158 0.00 0.00 0.00 5.03
100 101 2.352032 AAGAACTCCTCCCCTCGCG 61.352 63.158 0.00 0.00 0.00 5.87
101 102 2.754658 GAACTCCTCCCCTCGCGA 60.755 66.667 9.26 9.26 0.00 5.87
102 103 2.756283 AACTCCTCCCCTCGCGAG 60.756 66.667 29.06 29.06 0.00 5.03
111 112 2.262915 CCTCGCGAGGCAGTTCTT 59.737 61.111 39.83 0.00 42.44 2.52
112 113 1.807573 CCTCGCGAGGCAGTTCTTC 60.808 63.158 39.83 0.00 42.44 2.87
113 114 1.807573 CTCGCGAGGCAGTTCTTCC 60.808 63.158 28.40 0.00 0.00 3.46
114 115 2.219325 CTCGCGAGGCAGTTCTTCCT 62.219 60.000 28.40 0.00 34.90 3.36
115 116 1.374758 CGCGAGGCAGTTCTTCCTT 60.375 57.895 0.00 0.00 31.71 3.36
116 117 0.951040 CGCGAGGCAGTTCTTCCTTT 60.951 55.000 0.00 0.00 31.71 3.11
117 118 0.519077 GCGAGGCAGTTCTTCCTTTG 59.481 55.000 0.00 0.00 31.71 2.77
118 119 1.884235 CGAGGCAGTTCTTCCTTTGT 58.116 50.000 0.00 0.00 31.71 2.83
119 120 2.870435 GCGAGGCAGTTCTTCCTTTGTA 60.870 50.000 0.00 0.00 31.71 2.41
120 121 3.600388 CGAGGCAGTTCTTCCTTTGTAT 58.400 45.455 0.00 0.00 31.71 2.29
121 122 4.003648 CGAGGCAGTTCTTCCTTTGTATT 58.996 43.478 0.00 0.00 31.71 1.89
122 123 4.142816 CGAGGCAGTTCTTCCTTTGTATTG 60.143 45.833 0.00 0.00 31.71 1.90
123 124 4.729868 AGGCAGTTCTTCCTTTGTATTGT 58.270 39.130 0.00 0.00 0.00 2.71
124 125 5.140454 AGGCAGTTCTTCCTTTGTATTGTT 58.860 37.500 0.00 0.00 0.00 2.83
125 126 5.241728 AGGCAGTTCTTCCTTTGTATTGTTC 59.758 40.000 0.00 0.00 0.00 3.18
126 127 5.009610 GGCAGTTCTTCCTTTGTATTGTTCA 59.990 40.000 0.00 0.00 0.00 3.18
127 128 6.294731 GGCAGTTCTTCCTTTGTATTGTTCAT 60.295 38.462 0.00 0.00 0.00 2.57
128 129 6.803807 GCAGTTCTTCCTTTGTATTGTTCATC 59.196 38.462 0.00 0.00 0.00 2.92
129 130 7.522073 GCAGTTCTTCCTTTGTATTGTTCATCA 60.522 37.037 0.00 0.00 0.00 3.07
130 131 7.805071 CAGTTCTTCCTTTGTATTGTTCATCAC 59.195 37.037 0.00 0.00 0.00 3.06
131 132 6.817765 TCTTCCTTTGTATTGTTCATCACC 57.182 37.500 0.00 0.00 0.00 4.02
132 133 6.303054 TCTTCCTTTGTATTGTTCATCACCA 58.697 36.000 0.00 0.00 0.00 4.17
133 134 6.430925 TCTTCCTTTGTATTGTTCATCACCAG 59.569 38.462 0.00 0.00 0.00 4.00
134 135 4.458989 TCCTTTGTATTGTTCATCACCAGC 59.541 41.667 0.00 0.00 0.00 4.85
135 136 4.380867 CCTTTGTATTGTTCATCACCAGCC 60.381 45.833 0.00 0.00 0.00 4.85
136 137 2.722094 TGTATTGTTCATCACCAGCCC 58.278 47.619 0.00 0.00 0.00 5.19
137 138 2.024414 GTATTGTTCATCACCAGCCCC 58.976 52.381 0.00 0.00 0.00 5.80
138 139 0.706433 ATTGTTCATCACCAGCCCCT 59.294 50.000 0.00 0.00 0.00 4.79
139 140 0.251297 TTGTTCATCACCAGCCCCTG 60.251 55.000 0.00 0.00 0.00 4.45
140 141 1.133181 TGTTCATCACCAGCCCCTGA 61.133 55.000 0.00 0.00 32.44 3.86
141 142 0.393537 GTTCATCACCAGCCCCTGAG 60.394 60.000 0.00 0.00 32.44 3.35
142 143 1.565390 TTCATCACCAGCCCCTGAGG 61.565 60.000 0.00 0.00 39.47 3.86
151 152 2.276740 CCCCTGAGGCAATCCACC 59.723 66.667 0.00 0.00 33.74 4.61
152 153 2.615465 CCCCTGAGGCAATCCACCA 61.615 63.158 0.00 0.00 33.74 4.17
153 154 1.379044 CCCTGAGGCAATCCACCAC 60.379 63.158 0.00 0.00 33.74 4.16
154 155 1.379916 CCTGAGGCAATCCACCACA 59.620 57.895 0.00 0.00 33.74 4.17
155 156 0.962356 CCTGAGGCAATCCACCACAC 60.962 60.000 0.00 0.00 33.74 3.82
156 157 0.962356 CTGAGGCAATCCACCACACC 60.962 60.000 0.00 0.00 33.74 4.16
157 158 1.074775 GAGGCAATCCACCACACCA 59.925 57.895 0.00 0.00 33.74 4.17
158 159 1.228552 AGGCAATCCACCACACCAC 60.229 57.895 0.00 0.00 33.74 4.16
159 160 1.530419 GGCAATCCACCACACCACA 60.530 57.895 0.00 0.00 0.00 4.17
160 161 1.112315 GGCAATCCACCACACCACAA 61.112 55.000 0.00 0.00 0.00 3.33
161 162 0.749649 GCAATCCACCACACCACAAA 59.250 50.000 0.00 0.00 0.00 2.83
162 163 1.537990 GCAATCCACCACACCACAAAC 60.538 52.381 0.00 0.00 0.00 2.93
163 164 2.031120 CAATCCACCACACCACAAACT 58.969 47.619 0.00 0.00 0.00 2.66
164 165 3.218453 CAATCCACCACACCACAAACTA 58.782 45.455 0.00 0.00 0.00 2.24
165 166 2.631160 TCCACCACACCACAAACTAG 57.369 50.000 0.00 0.00 0.00 2.57
166 167 2.120312 TCCACCACACCACAAACTAGA 58.880 47.619 0.00 0.00 0.00 2.43
167 168 2.104111 TCCACCACACCACAAACTAGAG 59.896 50.000 0.00 0.00 0.00 2.43
168 169 2.158813 CCACCACACCACAAACTAGAGT 60.159 50.000 0.00 0.00 0.00 3.24
169 170 3.070446 CCACCACACCACAAACTAGAGTA 59.930 47.826 0.00 0.00 0.00 2.59
170 171 4.307432 CACCACACCACAAACTAGAGTAG 58.693 47.826 0.00 0.00 0.00 2.57
171 172 3.323979 ACCACACCACAAACTAGAGTAGG 59.676 47.826 0.00 0.00 0.00 3.18
172 173 3.306780 CCACACCACAAACTAGAGTAGGG 60.307 52.174 0.00 0.00 0.00 3.53
173 174 3.323979 CACACCACAAACTAGAGTAGGGT 59.676 47.826 0.00 0.00 0.00 4.34
174 175 4.525487 CACACCACAAACTAGAGTAGGGTA 59.475 45.833 0.00 0.00 0.00 3.69
175 176 5.187186 CACACCACAAACTAGAGTAGGGTAT 59.813 44.000 0.00 0.00 0.00 2.73
176 177 5.783875 ACACCACAAACTAGAGTAGGGTATT 59.216 40.000 0.00 0.00 0.00 1.89
177 178 6.955851 ACACCACAAACTAGAGTAGGGTATTA 59.044 38.462 0.00 0.00 0.00 0.98
178 179 7.093596 ACACCACAAACTAGAGTAGGGTATTAC 60.094 40.741 0.00 0.00 0.00 1.89
179 180 6.955851 ACCACAAACTAGAGTAGGGTATTACA 59.044 38.462 0.00 0.00 0.00 2.41
180 181 7.093596 ACCACAAACTAGAGTAGGGTATTACAC 60.094 40.741 0.00 0.00 0.00 2.90
198 199 2.961768 CACAATGGTGGCCCGAAC 59.038 61.111 0.00 0.00 41.45 3.95
199 200 1.603455 CACAATGGTGGCCCGAACT 60.603 57.895 0.00 0.00 41.45 3.01
200 201 0.322098 CACAATGGTGGCCCGAACTA 60.322 55.000 0.00 0.00 41.45 2.24
201 202 0.035439 ACAATGGTGGCCCGAACTAG 60.035 55.000 0.00 0.00 0.00 2.57
202 203 0.035439 CAATGGTGGCCCGAACTAGT 60.035 55.000 0.00 0.00 0.00 2.57
203 204 1.208535 CAATGGTGGCCCGAACTAGTA 59.791 52.381 0.00 0.00 0.00 1.82
204 205 1.802553 ATGGTGGCCCGAACTAGTAT 58.197 50.000 0.00 0.00 0.00 2.12
205 206 2.457813 TGGTGGCCCGAACTAGTATA 57.542 50.000 0.00 0.00 0.00 1.47
206 207 2.749600 TGGTGGCCCGAACTAGTATAA 58.250 47.619 0.00 0.00 0.00 0.98
207 208 3.106054 TGGTGGCCCGAACTAGTATAAA 58.894 45.455 0.00 0.00 0.00 1.40
208 209 3.118665 TGGTGGCCCGAACTAGTATAAAC 60.119 47.826 0.00 0.00 0.00 2.01
209 210 3.461061 GTGGCCCGAACTAGTATAAACC 58.539 50.000 0.00 0.00 0.00 3.27
210 211 3.133542 GTGGCCCGAACTAGTATAAACCT 59.866 47.826 0.00 0.00 0.00 3.50
211 212 3.385755 TGGCCCGAACTAGTATAAACCTC 59.614 47.826 0.00 0.00 0.00 3.85
212 213 3.551659 GGCCCGAACTAGTATAAACCTCG 60.552 52.174 0.00 0.00 0.00 4.63
213 214 3.067320 GCCCGAACTAGTATAAACCTCGT 59.933 47.826 9.34 0.00 0.00 4.18
214 215 4.604976 CCCGAACTAGTATAAACCTCGTG 58.395 47.826 9.34 0.00 0.00 4.35
215 216 4.096984 CCCGAACTAGTATAAACCTCGTGT 59.903 45.833 9.34 0.00 0.00 4.49
216 217 5.269313 CCGAACTAGTATAAACCTCGTGTC 58.731 45.833 9.34 0.00 0.00 3.67
217 218 5.269313 CGAACTAGTATAAACCTCGTGTCC 58.731 45.833 0.00 0.00 0.00 4.02
218 219 5.586339 GAACTAGTATAAACCTCGTGTCCC 58.414 45.833 0.00 0.00 0.00 4.46
219 220 4.864726 ACTAGTATAAACCTCGTGTCCCT 58.135 43.478 0.00 0.00 0.00 4.20
220 221 5.267587 ACTAGTATAAACCTCGTGTCCCTT 58.732 41.667 0.00 0.00 0.00 3.95
221 222 4.467198 AGTATAAACCTCGTGTCCCTTG 57.533 45.455 0.00 0.00 0.00 3.61
222 223 3.836562 AGTATAAACCTCGTGTCCCTTGT 59.163 43.478 0.00 0.00 0.00 3.16
223 224 2.536761 TAAACCTCGTGTCCCTTGTG 57.463 50.000 0.00 0.00 0.00 3.33
224 225 0.544697 AAACCTCGTGTCCCTTGTGT 59.455 50.000 0.00 0.00 0.00 3.72
225 226 0.544697 AACCTCGTGTCCCTTGTGTT 59.455 50.000 0.00 0.00 0.00 3.32
226 227 0.179056 ACCTCGTGTCCCTTGTGTTG 60.179 55.000 0.00 0.00 0.00 3.33
227 228 0.179056 CCTCGTGTCCCTTGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
228 229 1.663695 CTCGTGTCCCTTGTGTTGTT 58.336 50.000 0.00 0.00 0.00 2.83
229 230 1.597663 CTCGTGTCCCTTGTGTTGTTC 59.402 52.381 0.00 0.00 0.00 3.18
230 231 1.208535 TCGTGTCCCTTGTGTTGTTCT 59.791 47.619 0.00 0.00 0.00 3.01
231 232 2.014128 CGTGTCCCTTGTGTTGTTCTT 58.986 47.619 0.00 0.00 0.00 2.52
232 233 2.031683 CGTGTCCCTTGTGTTGTTCTTC 59.968 50.000 0.00 0.00 0.00 2.87
233 234 2.031683 GTGTCCCTTGTGTTGTTCTTCG 59.968 50.000 0.00 0.00 0.00 3.79
234 235 2.285977 GTCCCTTGTGTTGTTCTTCGT 58.714 47.619 0.00 0.00 0.00 3.85
235 236 2.031683 GTCCCTTGTGTTGTTCTTCGTG 59.968 50.000 0.00 0.00 0.00 4.35
236 237 2.014128 CCCTTGTGTTGTTCTTCGTGT 58.986 47.619 0.00 0.00 0.00 4.49
237 238 3.118702 TCCCTTGTGTTGTTCTTCGTGTA 60.119 43.478 0.00 0.00 0.00 2.90
238 239 3.247648 CCCTTGTGTTGTTCTTCGTGTAG 59.752 47.826 0.00 0.00 0.00 2.74
239 240 3.869246 CCTTGTGTTGTTCTTCGTGTAGT 59.131 43.478 0.00 0.00 0.00 2.73
240 241 4.331717 CCTTGTGTTGTTCTTCGTGTAGTT 59.668 41.667 0.00 0.00 0.00 2.24
241 242 5.163794 CCTTGTGTTGTTCTTCGTGTAGTTT 60.164 40.000 0.00 0.00 0.00 2.66
242 243 6.036300 CCTTGTGTTGTTCTTCGTGTAGTTTA 59.964 38.462 0.00 0.00 0.00 2.01
243 244 6.578020 TGTGTTGTTCTTCGTGTAGTTTAG 57.422 37.500 0.00 0.00 0.00 1.85
244 245 6.331845 TGTGTTGTTCTTCGTGTAGTTTAGA 58.668 36.000 0.00 0.00 0.00 2.10
245 246 6.982141 TGTGTTGTTCTTCGTGTAGTTTAGAT 59.018 34.615 0.00 0.00 0.00 1.98
246 247 7.168637 TGTGTTGTTCTTCGTGTAGTTTAGATC 59.831 37.037 0.00 0.00 0.00 2.75
247 248 6.643770 TGTTGTTCTTCGTGTAGTTTAGATCC 59.356 38.462 0.00 0.00 0.00 3.36
248 249 6.585695 TGTTCTTCGTGTAGTTTAGATCCT 57.414 37.500 0.00 0.00 0.00 3.24
249 250 6.989659 TGTTCTTCGTGTAGTTTAGATCCTT 58.010 36.000 0.00 0.00 0.00 3.36
250 251 6.866770 TGTTCTTCGTGTAGTTTAGATCCTTG 59.133 38.462 0.00 0.00 0.00 3.61
251 252 5.408356 TCTTCGTGTAGTTTAGATCCTTGC 58.592 41.667 0.00 0.00 0.00 4.01
252 253 3.766151 TCGTGTAGTTTAGATCCTTGCG 58.234 45.455 0.00 0.00 0.00 4.85
253 254 3.441222 TCGTGTAGTTTAGATCCTTGCGA 59.559 43.478 0.00 0.00 0.00 5.10
254 255 3.791887 CGTGTAGTTTAGATCCTTGCGAG 59.208 47.826 0.00 0.00 0.00 5.03
255 256 4.113354 GTGTAGTTTAGATCCTTGCGAGG 58.887 47.826 14.59 14.59 45.02 4.63
256 257 2.317530 AGTTTAGATCCTTGCGAGGC 57.682 50.000 16.01 2.01 43.21 4.70
257 258 0.931005 GTTTAGATCCTTGCGAGGCG 59.069 55.000 16.01 0.00 43.21 5.52
258 259 0.821517 TTTAGATCCTTGCGAGGCGA 59.178 50.000 16.01 0.00 43.21 5.54
259 260 0.102481 TTAGATCCTTGCGAGGCGAC 59.898 55.000 16.01 8.73 43.21 5.19
260 261 2.060004 TAGATCCTTGCGAGGCGACG 62.060 60.000 16.01 0.00 43.21 5.12
261 262 3.411418 GATCCTTGCGAGGCGACGA 62.411 63.158 16.01 0.00 43.21 4.20
262 263 3.417275 ATCCTTGCGAGGCGACGAG 62.417 63.158 16.01 0.00 43.21 4.18
263 264 4.116328 CCTTGCGAGGCGACGAGA 62.116 66.667 7.18 0.00 35.94 4.04
264 265 2.876645 CTTGCGAGGCGACGAGAC 60.877 66.667 0.00 0.00 35.09 3.36
265 266 3.610791 CTTGCGAGGCGACGAGACA 62.611 63.158 0.00 0.00 35.09 3.41
266 267 2.874010 CTTGCGAGGCGACGAGACAT 62.874 60.000 0.00 0.00 35.09 3.06
267 268 1.650314 TTGCGAGGCGACGAGACATA 61.650 55.000 0.00 0.00 35.09 2.29
268 269 1.369448 GCGAGGCGACGAGACATAG 60.369 63.158 0.00 0.00 35.09 2.23
269 270 1.280142 CGAGGCGACGAGACATAGG 59.720 63.158 0.00 0.00 35.09 2.57
270 271 1.437772 CGAGGCGACGAGACATAGGT 61.438 60.000 0.00 0.00 35.09 3.08
271 272 1.590932 GAGGCGACGAGACATAGGTA 58.409 55.000 0.00 0.00 0.00 3.08
272 273 1.945394 GAGGCGACGAGACATAGGTAA 59.055 52.381 0.00 0.00 0.00 2.85
273 274 1.948145 AGGCGACGAGACATAGGTAAG 59.052 52.381 0.00 0.00 0.00 2.34
274 275 1.674962 GGCGACGAGACATAGGTAAGT 59.325 52.381 0.00 0.00 0.00 2.24
275 276 2.874701 GGCGACGAGACATAGGTAAGTA 59.125 50.000 0.00 0.00 0.00 2.24
276 277 3.059051 GGCGACGAGACATAGGTAAGTAG 60.059 52.174 0.00 0.00 0.00 2.57
277 278 3.059051 GCGACGAGACATAGGTAAGTAGG 60.059 52.174 0.00 0.00 0.00 3.18
278 279 4.375272 CGACGAGACATAGGTAAGTAGGA 58.625 47.826 0.00 0.00 0.00 2.94
279 280 4.448395 CGACGAGACATAGGTAAGTAGGAG 59.552 50.000 0.00 0.00 0.00 3.69
280 281 4.716794 ACGAGACATAGGTAAGTAGGAGG 58.283 47.826 0.00 0.00 0.00 4.30
281 282 4.165758 ACGAGACATAGGTAAGTAGGAGGT 59.834 45.833 0.00 0.00 0.00 3.85
282 283 4.515944 CGAGACATAGGTAAGTAGGAGGTG 59.484 50.000 0.00 0.00 0.00 4.00
283 284 5.447757 GAGACATAGGTAAGTAGGAGGTGT 58.552 45.833 0.00 0.00 0.00 4.16
284 285 5.202004 AGACATAGGTAAGTAGGAGGTGTG 58.798 45.833 0.00 0.00 0.00 3.82
285 286 5.044328 AGACATAGGTAAGTAGGAGGTGTGA 60.044 44.000 0.00 0.00 0.00 3.58
286 287 5.778542 ACATAGGTAAGTAGGAGGTGTGAT 58.221 41.667 0.00 0.00 0.00 3.06
287 288 5.834204 ACATAGGTAAGTAGGAGGTGTGATC 59.166 44.000 0.00 0.00 0.00 2.92
288 289 4.611564 AGGTAAGTAGGAGGTGTGATCT 57.388 45.455 0.00 0.00 0.00 2.75
289 290 4.538738 AGGTAAGTAGGAGGTGTGATCTC 58.461 47.826 0.00 0.00 0.00 2.75
293 294 2.105128 GGAGGTGTGATCTCCGCG 59.895 66.667 0.00 0.00 41.01 6.46
294 295 2.583593 GAGGTGTGATCTCCGCGC 60.584 66.667 0.00 0.00 35.16 6.86
295 296 4.498520 AGGTGTGATCTCCGCGCG 62.499 66.667 25.67 25.67 36.68 6.86
296 297 4.796231 GGTGTGATCTCCGCGCGT 62.796 66.667 29.95 10.26 36.68 6.01
297 298 2.101575 GTGTGATCTCCGCGCGTA 59.898 61.111 29.95 13.14 0.00 4.42
298 299 2.101575 TGTGATCTCCGCGCGTAC 59.898 61.111 29.95 16.60 0.00 3.67
299 300 2.654404 GTGATCTCCGCGCGTACC 60.654 66.667 29.95 13.00 0.00 3.34
300 301 3.896133 TGATCTCCGCGCGTACCC 61.896 66.667 29.95 13.73 0.00 3.69
301 302 4.642542 GATCTCCGCGCGTACCCC 62.643 72.222 29.95 10.96 0.00 4.95
307 308 4.430765 CGCGCGTACCCCAGAGTT 62.431 66.667 24.19 0.00 0.00 3.01
308 309 2.508663 GCGCGTACCCCAGAGTTC 60.509 66.667 8.43 0.00 0.00 3.01
309 310 2.202570 CGCGTACCCCAGAGTTCG 60.203 66.667 0.00 0.00 34.14 3.95
310 311 2.693762 CGCGTACCCCAGAGTTCGA 61.694 63.158 0.00 0.00 32.95 3.71
311 312 1.588082 GCGTACCCCAGAGTTCGAA 59.412 57.895 0.00 0.00 32.95 3.71
312 313 0.735287 GCGTACCCCAGAGTTCGAAC 60.735 60.000 20.71 20.71 32.95 3.95
313 314 0.108945 CGTACCCCAGAGTTCGAACC 60.109 60.000 24.22 15.46 32.95 3.62
314 315 1.264295 GTACCCCAGAGTTCGAACCT 58.736 55.000 24.22 17.39 0.00 3.50
315 316 1.622312 GTACCCCAGAGTTCGAACCTT 59.378 52.381 24.22 10.36 0.00 3.50
316 317 0.396811 ACCCCAGAGTTCGAACCTTG 59.603 55.000 24.22 20.61 0.00 3.61
317 318 0.685097 CCCCAGAGTTCGAACCTTGA 59.315 55.000 24.22 0.00 0.00 3.02
318 319 1.338200 CCCCAGAGTTCGAACCTTGAG 60.338 57.143 24.22 13.32 0.00 3.02
319 320 1.338200 CCCAGAGTTCGAACCTTGAGG 60.338 57.143 24.22 18.88 42.17 3.86
320 321 1.338200 CCAGAGTTCGAACCTTGAGGG 60.338 57.143 24.22 13.39 40.27 4.30
329 330 3.003173 CCTTGAGGGTCTGCCGGA 61.003 66.667 5.05 0.00 34.97 5.14
330 331 2.592993 CCTTGAGGGTCTGCCGGAA 61.593 63.158 5.05 0.00 34.97 4.30
331 332 1.376037 CTTGAGGGTCTGCCGGAAC 60.376 63.158 5.05 0.00 34.97 3.62
367 368 1.454479 CCACATCCAGCACCATCCC 60.454 63.158 0.00 0.00 0.00 3.85
368 369 1.303948 CACATCCAGCACCATCCCA 59.696 57.895 0.00 0.00 0.00 4.37
369 370 1.033746 CACATCCAGCACCATCCCAC 61.034 60.000 0.00 0.00 0.00 4.61
370 371 1.303948 CATCCAGCACCATCCCACA 59.696 57.895 0.00 0.00 0.00 4.17
371 372 1.033746 CATCCAGCACCATCCCACAC 61.034 60.000 0.00 0.00 0.00 3.82
381 382 1.270839 CCATCCCACACGACAAACTCT 60.271 52.381 0.00 0.00 0.00 3.24
401 402 2.428890 CTGACGAGAAAGAGTAGGGCAT 59.571 50.000 0.00 0.00 0.00 4.40
402 403 3.628008 TGACGAGAAAGAGTAGGGCATA 58.372 45.455 0.00 0.00 0.00 3.14
403 404 4.215908 TGACGAGAAAGAGTAGGGCATAT 58.784 43.478 0.00 0.00 0.00 1.78
404 405 4.038042 TGACGAGAAAGAGTAGGGCATATG 59.962 45.833 0.00 0.00 0.00 1.78
405 406 3.961408 ACGAGAAAGAGTAGGGCATATGT 59.039 43.478 4.29 0.00 0.00 2.29
418 419 0.308684 CATATGTGACGTGGGCATGC 59.691 55.000 9.90 9.90 0.00 4.06
432 433 1.755395 CATGCCTGGTGTCCCATGG 60.755 63.158 4.14 4.14 40.90 3.66
494 495 7.191551 CACAACCGACGAAGATTTAGACTATA 58.808 38.462 0.00 0.00 0.00 1.31
535 538 8.760569 CCGCTTTTGTTTAGTTGAAATATGTTT 58.239 29.630 0.00 0.00 0.00 2.83
573 576 8.661352 ACTTGGTCTGGTTTAAATGAAAATTG 57.339 30.769 0.00 0.00 0.00 2.32
580 583 9.434420 TCTGGTTTAAATGAAAATTGCCTAATG 57.566 29.630 0.00 0.00 0.00 1.90
593 596 6.671614 ATTGCCTAATGTGCATGAAATTTG 57.328 33.333 0.00 0.00 38.76 2.32
599 602 0.246086 GTGCATGAAATTTGCCCGGA 59.754 50.000 0.73 0.00 39.39 5.14
602 605 2.762887 TGCATGAAATTTGCCCGGATTA 59.237 40.909 0.73 0.00 39.39 1.75
606 609 5.599732 CATGAAATTTGCCCGGATTATTCA 58.400 37.500 0.73 6.42 0.00 2.57
661 664 1.749258 GGGGTTGAATGTCCGGCTC 60.749 63.158 0.00 0.00 0.00 4.70
675 678 1.602771 GGCTCCCCTAACACTGTCC 59.397 63.158 0.00 0.00 0.00 4.02
681 685 1.515954 CCTAACACTGTCCGCGGAT 59.484 57.895 33.58 17.08 0.00 4.18
693 697 3.204827 GCGGATGCTTGTGCGGAT 61.205 61.111 1.34 0.00 43.34 4.18
699 703 3.664107 GGATGCTTGTGCGGATAGATAA 58.336 45.455 0.00 0.00 43.34 1.75
713 717 7.703298 CGGATAGATAATGTGTCCGTTTTAA 57.297 36.000 8.69 0.00 44.94 1.52
724 728 0.664224 CCGTTTTAAGGGTGTGCGTT 59.336 50.000 0.00 0.00 0.00 4.84
738 742 1.153086 GCGTTGGAGATGCCCTGAT 60.153 57.895 0.00 0.00 34.03 2.90
754 758 6.363882 TGCCCTGATATGTGACAAATAATCA 58.636 36.000 0.00 0.00 0.00 2.57
755 759 6.832900 TGCCCTGATATGTGACAAATAATCAA 59.167 34.615 0.00 0.00 0.00 2.57
756 760 7.341512 TGCCCTGATATGTGACAAATAATCAAA 59.658 33.333 0.00 0.00 0.00 2.69
820 824 4.457281 CCATGGGGCAAATGGTCA 57.543 55.556 2.85 0.00 39.87 4.02
836 969 1.341383 GGTCAAATGCCCTCATGACCT 60.341 52.381 14.78 0.00 40.20 3.85
875 1008 1.002366 GCAGCATCTACACAACTCCG 58.998 55.000 0.00 0.00 0.00 4.63
932 1190 2.752238 CTCCGGCGACTCCTGTCT 60.752 66.667 9.30 0.00 40.86 3.41
1112 1377 4.082523 GCTAGCGGGACACCAGCA 62.083 66.667 14.31 1.53 38.29 4.41
1380 1645 1.467678 CCGCCCCTCTCAATCTCGAT 61.468 60.000 0.00 0.00 0.00 3.59
1747 2012 0.109086 CCGCATCACAGAGTTCTCGT 60.109 55.000 0.00 0.00 0.00 4.18
1846 2111 2.743183 CGGATCAACTCCCTTAGCCTTG 60.743 54.545 0.00 0.00 41.49 3.61
1854 2119 3.118223 ACTCCCTTAGCCTTGTAAGCATC 60.118 47.826 0.00 0.00 0.00 3.91
1914 2179 4.561105 GGGAACTCATCATCGAGAATACC 58.439 47.826 0.00 0.00 36.47 2.73
2077 2342 3.833650 TGGTGGGTTTCGTAACTCAGATA 59.166 43.478 7.83 0.00 45.14 1.98
2162 2427 0.867746 ATTGCAGTGCTGTGTGTACG 59.132 50.000 17.60 0.00 36.37 3.67
2261 2526 4.539083 TGACAACGGCAGTGCGGT 62.539 61.111 21.42 21.42 43.64 5.68
2372 2637 8.105829 AGATGTACATTCAGGTGAAGATTCTTT 58.894 33.333 10.30 0.00 37.48 2.52
2499 2764 4.403734 GGTCAGAAGGGGAAAACAATGTA 58.596 43.478 0.00 0.00 0.00 2.29
2538 2803 5.344128 CCGCAATTTCATCAGAAGTTTTGAG 59.656 40.000 2.27 0.00 32.13 3.02
2541 2806 7.327761 CGCAATTTCATCAGAAGTTTTGAGATT 59.672 33.333 2.27 0.00 32.13 2.40
2610 2875 6.785191 TGAAGTTGACTTTGTCACATTCTTC 58.215 36.000 17.35 17.13 42.60 2.87
2808 3073 3.906998 TGTGCGTGATTTGGGTTTAATG 58.093 40.909 0.00 0.00 0.00 1.90
2811 3076 3.057174 TGCGTGATTTGGGTTTAATGGAC 60.057 43.478 0.00 0.00 0.00 4.02
2829 3094 1.745087 GACCCATTCGCATGTTGACAT 59.255 47.619 0.00 0.00 36.96 3.06
2965 3231 6.003326 TGCTCATTTTGATTCCAGTAGAACA 58.997 36.000 0.00 0.00 37.29 3.18
2966 3232 6.660521 TGCTCATTTTGATTCCAGTAGAACAT 59.339 34.615 0.00 0.00 37.29 2.71
2967 3233 7.148188 TGCTCATTTTGATTCCAGTAGAACATC 60.148 37.037 0.00 0.00 37.29 3.06
2968 3234 7.148188 GCTCATTTTGATTCCAGTAGAACATCA 60.148 37.037 0.00 0.00 37.29 3.07
2969 3235 8.044060 TCATTTTGATTCCAGTAGAACATCAC 57.956 34.615 0.00 0.00 37.29 3.06
2970 3236 7.884877 TCATTTTGATTCCAGTAGAACATCACT 59.115 33.333 0.00 0.00 37.29 3.41
2971 3237 9.166173 CATTTTGATTCCAGTAGAACATCACTA 57.834 33.333 0.00 0.00 37.29 2.74
2972 3238 8.777865 TTTTGATTCCAGTAGAACATCACTAG 57.222 34.615 0.00 0.00 37.29 2.57
2973 3239 6.471233 TGATTCCAGTAGAACATCACTAGG 57.529 41.667 0.00 0.00 37.29 3.02
2974 3240 5.958380 TGATTCCAGTAGAACATCACTAGGT 59.042 40.000 0.00 0.00 37.29 3.08
2975 3241 6.440647 TGATTCCAGTAGAACATCACTAGGTT 59.559 38.462 0.00 0.00 37.29 3.50
2976 3242 5.661056 TCCAGTAGAACATCACTAGGTTG 57.339 43.478 0.00 0.00 27.75 3.77
2977 3243 4.081642 TCCAGTAGAACATCACTAGGTTGC 60.082 45.833 0.00 0.00 27.75 4.17
2978 3244 3.859961 CAGTAGAACATCACTAGGTTGCG 59.140 47.826 0.00 0.00 27.75 4.85
2979 3245 3.510360 AGTAGAACATCACTAGGTTGCGT 59.490 43.478 0.00 0.00 27.75 5.24
2980 3246 4.703575 AGTAGAACATCACTAGGTTGCGTA 59.296 41.667 0.00 0.00 27.75 4.42
2981 3247 3.846360 AGAACATCACTAGGTTGCGTAC 58.154 45.455 0.00 0.00 27.75 3.67
2982 3248 3.510360 AGAACATCACTAGGTTGCGTACT 59.490 43.478 0.00 0.00 27.75 2.73
2983 3249 4.703575 AGAACATCACTAGGTTGCGTACTA 59.296 41.667 0.00 0.00 27.75 1.82
2984 3250 5.360144 AGAACATCACTAGGTTGCGTACTAT 59.640 40.000 0.00 0.00 27.75 2.12
2985 3251 6.544931 AGAACATCACTAGGTTGCGTACTATA 59.455 38.462 0.00 0.00 27.75 1.31
2986 3252 6.315091 ACATCACTAGGTTGCGTACTATAG 57.685 41.667 0.00 0.00 0.00 1.31
2987 3253 6.060136 ACATCACTAGGTTGCGTACTATAGA 58.940 40.000 6.78 0.00 0.00 1.98
2988 3254 6.544931 ACATCACTAGGTTGCGTACTATAGAA 59.455 38.462 6.78 0.00 0.00 2.10
2989 3255 7.067859 ACATCACTAGGTTGCGTACTATAGAAA 59.932 37.037 6.78 0.00 0.00 2.52
2990 3256 7.578310 TCACTAGGTTGCGTACTATAGAAAT 57.422 36.000 6.78 0.00 0.00 2.17
2991 3257 7.423199 TCACTAGGTTGCGTACTATAGAAATG 58.577 38.462 6.78 0.98 0.00 2.32
2992 3258 7.067859 TCACTAGGTTGCGTACTATAGAAATGT 59.932 37.037 6.78 0.00 0.00 2.71
2993 3259 8.347771 CACTAGGTTGCGTACTATAGAAATGTA 58.652 37.037 6.78 0.00 0.00 2.29
2994 3260 9.075678 ACTAGGTTGCGTACTATAGAAATGTAT 57.924 33.333 6.78 0.00 0.00 2.29
2995 3261 9.343103 CTAGGTTGCGTACTATAGAAATGTATG 57.657 37.037 6.78 0.00 0.00 2.39
2996 3262 7.152645 AGGTTGCGTACTATAGAAATGTATGG 58.847 38.462 6.78 0.00 0.00 2.74
2997 3263 7.014905 AGGTTGCGTACTATAGAAATGTATGGA 59.985 37.037 6.78 0.00 0.00 3.41
2998 3264 7.654520 GGTTGCGTACTATAGAAATGTATGGAA 59.345 37.037 6.78 0.00 33.41 3.53
2999 3265 9.037737 GTTGCGTACTATAGAAATGTATGGAAA 57.962 33.333 6.78 0.00 36.07 3.13
3000 3266 8.583810 TGCGTACTATAGAAATGTATGGAAAC 57.416 34.615 6.78 0.00 0.00 2.78
3015 3281 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
3016 3282 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
3017 3283 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
3018 3284 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
3019 3285 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
3020 3286 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3021 3287 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
3022 3288 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
3023 3289 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
3024 3290 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
3025 3291 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
3026 3292 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
3027 3293 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
3028 3294 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
3029 3295 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
3030 3296 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
3031 3297 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
3032 3298 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
3033 3299 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
3034 3300 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
3035 3301 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
3036 3302 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
3037 3303 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
3038 3304 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
3039 3305 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
3040 3306 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
3041 3307 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
3042 3308 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
3043 3309 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
3044 3310 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
3045 3311 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
3046 3312 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
3047 3313 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
3048 3314 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
3049 3315 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
3050 3316 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
3051 3317 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
3052 3318 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
3057 3323 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
3058 3324 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3059 3325 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3060 3326 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3061 3327 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3062 3328 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3063 3329 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3064 3330 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3065 3331 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
3066 3332 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
3067 3333 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
3068 3334 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
3069 3335 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
3070 3336 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
3071 3337 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
3072 3338 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
3073 3339 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
3074 3340 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
3075 3341 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
3076 3342 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
3101 3367 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
3102 3368 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
3103 3369 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
3104 3370 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
3105 3371 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
3106 3372 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
3107 3373 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
3108 3374 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
3109 3375 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
3110 3376 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
3193 3459 4.382754 GTCATTTTGGCTACTTTTGCTTCG 59.617 41.667 0.00 0.00 0.00 3.79
3201 3471 3.433615 GCTACTTTTGCTTCGAGTCACAT 59.566 43.478 0.00 0.00 0.00 3.21
3216 3486 5.637810 CGAGTCACATTTGGCTAGTTTTCTA 59.362 40.000 0.00 0.00 38.01 2.10
3222 3492 7.029563 CACATTTGGCTAGTTTTCTAATGGAC 58.970 38.462 0.00 0.00 29.88 4.02
3278 3552 5.818887 TGTATGGCAGCATATATGGATGTT 58.181 37.500 14.51 0.00 0.00 2.71
3529 3893 1.754803 AGGATGTTTGGCTGCATGATG 59.245 47.619 0.50 0.00 0.00 3.07
3530 3894 1.479323 GGATGTTTGGCTGCATGATGT 59.521 47.619 0.50 0.00 0.00 3.06
3531 3895 2.689471 GGATGTTTGGCTGCATGATGTA 59.311 45.455 0.50 0.00 0.00 2.29
3532 3896 3.489738 GGATGTTTGGCTGCATGATGTAC 60.490 47.826 0.50 0.00 0.00 2.90
3533 3897 2.794103 TGTTTGGCTGCATGATGTACT 58.206 42.857 0.50 0.00 0.00 2.73
3534 3898 2.749076 TGTTTGGCTGCATGATGTACTC 59.251 45.455 0.50 0.00 0.00 2.59
3535 3899 2.042686 TTGGCTGCATGATGTACTCC 57.957 50.000 0.50 0.00 0.00 3.85
3564 3928 1.542915 CATCAAGTTCCACAGCTTGGG 59.457 52.381 12.99 4.82 46.92 4.12
3580 3944 3.637184 GGGTAACATCACACCCGTT 57.363 52.632 0.00 0.00 44.87 4.44
3633 3998 5.733676 TGTTGCTAACTGATCATCAAGCTA 58.266 37.500 18.54 11.77 31.09 3.32
3671 4036 3.553095 AACCGCTGAGGCTTCCCAC 62.553 63.158 0.00 0.00 46.52 4.61
3694 4059 4.631740 TGGCCCTCGGTGTCCTCA 62.632 66.667 0.00 0.00 0.00 3.86
3699 4064 0.324943 CCCTCGGTGTCCTCATTTGT 59.675 55.000 0.00 0.00 0.00 2.83
3715 4080 4.158949 TCATTTGTCATGGCAAGAATCTGG 59.841 41.667 13.27 0.00 0.00 3.86
3727 4092 4.021916 CAAGAATCTGGGGCAAAGAATCT 58.978 43.478 1.55 1.55 35.82 2.40
3784 4149 1.076412 TTGTGCAGGTTCAGGCCAA 60.076 52.632 5.01 0.00 0.00 4.52
3801 4166 3.075148 GCCAACTTTCCTTAGTCTGTCC 58.925 50.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.023888 ACTCTGTGGTGGCTAGTCCTAT 60.024 50.000 0.00 0.00 35.26 2.57
1 2 1.358103 ACTCTGTGGTGGCTAGTCCTA 59.642 52.381 0.00 0.00 35.26 2.94
2 3 0.115349 ACTCTGTGGTGGCTAGTCCT 59.885 55.000 0.00 0.00 35.26 3.85
3 4 1.751924 CTACTCTGTGGTGGCTAGTCC 59.248 57.143 0.00 0.00 0.00 3.85
4 5 1.751924 CCTACTCTGTGGTGGCTAGTC 59.248 57.143 0.00 0.00 0.00 2.59
5 6 1.358103 TCCTACTCTGTGGTGGCTAGT 59.642 52.381 0.00 0.00 0.00 2.57
6 7 2.028130 CTCCTACTCTGTGGTGGCTAG 58.972 57.143 0.00 0.00 0.00 3.42
7 8 1.342076 CCTCCTACTCTGTGGTGGCTA 60.342 57.143 0.00 0.00 31.42 3.93
8 9 0.616111 CCTCCTACTCTGTGGTGGCT 60.616 60.000 0.00 0.00 31.42 4.75
9 10 1.617947 CCCTCCTACTCTGTGGTGGC 61.618 65.000 0.00 0.00 36.10 5.01
10 11 0.041238 TCCCTCCTACTCTGTGGTGG 59.959 60.000 0.00 0.00 36.90 4.61
11 12 1.938585 TTCCCTCCTACTCTGTGGTG 58.061 55.000 0.00 0.00 0.00 4.17
12 13 2.715763 TTTCCCTCCTACTCTGTGGT 57.284 50.000 0.00 0.00 0.00 4.16
13 14 3.173965 TCTTTTCCCTCCTACTCTGTGG 58.826 50.000 0.00 0.00 0.00 4.17
14 15 3.196685 CCTCTTTTCCCTCCTACTCTGTG 59.803 52.174 0.00 0.00 0.00 3.66
15 16 3.077695 TCCTCTTTTCCCTCCTACTCTGT 59.922 47.826 0.00 0.00 0.00 3.41
16 17 3.449377 GTCCTCTTTTCCCTCCTACTCTG 59.551 52.174 0.00 0.00 0.00 3.35
17 18 3.077695 TGTCCTCTTTTCCCTCCTACTCT 59.922 47.826 0.00 0.00 0.00 3.24
18 19 3.196039 GTGTCCTCTTTTCCCTCCTACTC 59.804 52.174 0.00 0.00 0.00 2.59
19 20 3.174779 GTGTCCTCTTTTCCCTCCTACT 58.825 50.000 0.00 0.00 0.00 2.57
20 21 2.236644 GGTGTCCTCTTTTCCCTCCTAC 59.763 54.545 0.00 0.00 0.00 3.18
21 22 2.158066 TGGTGTCCTCTTTTCCCTCCTA 60.158 50.000 0.00 0.00 0.00 2.94
22 23 1.363246 GGTGTCCTCTTTTCCCTCCT 58.637 55.000 0.00 0.00 0.00 3.69
23 24 1.003696 CTGGTGTCCTCTTTTCCCTCC 59.996 57.143 0.00 0.00 0.00 4.30
24 25 1.978580 TCTGGTGTCCTCTTTTCCCTC 59.021 52.381 0.00 0.00 0.00 4.30
25 26 2.118403 TCTGGTGTCCTCTTTTCCCT 57.882 50.000 0.00 0.00 0.00 4.20
26 27 2.356227 GGATCTGGTGTCCTCTTTTCCC 60.356 54.545 0.00 0.00 32.85 3.97
27 28 2.678190 CGGATCTGGTGTCCTCTTTTCC 60.678 54.545 0.00 0.00 33.46 3.13
28 29 2.622436 CGGATCTGGTGTCCTCTTTTC 58.378 52.381 0.00 0.00 33.46 2.29
29 30 1.279271 CCGGATCTGGTGTCCTCTTTT 59.721 52.381 12.93 0.00 33.46 2.27
30 31 0.905357 CCGGATCTGGTGTCCTCTTT 59.095 55.000 12.93 0.00 33.46 2.52
31 32 0.041238 TCCGGATCTGGTGTCCTCTT 59.959 55.000 20.32 0.00 33.46 2.85
32 33 0.263172 ATCCGGATCTGGTGTCCTCT 59.737 55.000 20.32 0.00 33.46 3.69
33 34 1.069358 GAATCCGGATCTGGTGTCCTC 59.931 57.143 19.43 4.17 33.46 3.71
34 35 1.123928 GAATCCGGATCTGGTGTCCT 58.876 55.000 19.43 0.00 33.46 3.85
35 36 0.830648 TGAATCCGGATCTGGTGTCC 59.169 55.000 19.43 8.85 0.00 4.02
36 37 2.691409 TTGAATCCGGATCTGGTGTC 57.309 50.000 19.43 17.45 0.00 3.67
37 38 2.158755 GGATTGAATCCGGATCTGGTGT 60.159 50.000 19.43 9.34 40.13 4.16
38 39 2.498167 GGATTGAATCCGGATCTGGTG 58.502 52.381 19.43 0.00 40.13 4.17
39 40 2.938956 GGATTGAATCCGGATCTGGT 57.061 50.000 19.43 0.58 40.13 4.00
47 48 3.995846 CCTCTTGGGAAGGATTGAATCCG 60.996 52.174 17.86 2.90 45.79 4.18
48 49 3.560105 CCTCTTGGGAAGGATTGAATCC 58.440 50.000 16.35 16.35 43.26 3.01
49 50 2.954989 GCCTCTTGGGAAGGATTGAATC 59.045 50.000 0.00 0.00 37.23 2.52
50 51 2.312741 TGCCTCTTGGGAAGGATTGAAT 59.687 45.455 0.00 0.00 37.23 2.57
51 52 1.710244 TGCCTCTTGGGAAGGATTGAA 59.290 47.619 0.00 0.00 37.23 2.69
52 53 1.371467 TGCCTCTTGGGAAGGATTGA 58.629 50.000 0.00 0.00 37.23 2.57
53 54 2.305009 GATGCCTCTTGGGAAGGATTG 58.695 52.381 0.00 0.00 37.19 2.67
54 55 1.925255 TGATGCCTCTTGGGAAGGATT 59.075 47.619 0.00 0.00 37.19 3.01
55 56 1.213926 GTGATGCCTCTTGGGAAGGAT 59.786 52.381 0.00 0.00 37.19 3.24
56 57 0.620556 GTGATGCCTCTTGGGAAGGA 59.379 55.000 0.00 0.00 37.19 3.36
57 58 0.394899 GGTGATGCCTCTTGGGAAGG 60.395 60.000 0.00 0.00 37.19 3.46
58 59 0.622665 AGGTGATGCCTCTTGGGAAG 59.377 55.000 0.00 0.00 46.96 3.46
59 60 2.791253 AGGTGATGCCTCTTGGGAA 58.209 52.632 0.00 0.00 46.96 3.97
60 61 4.587520 AGGTGATGCCTCTTGGGA 57.412 55.556 0.00 0.00 46.96 4.37
68 69 1.168714 GTTCTTGTGGAGGTGATGCC 58.831 55.000 0.00 0.00 37.58 4.40
69 70 2.079925 GAGTTCTTGTGGAGGTGATGC 58.920 52.381 0.00 0.00 0.00 3.91
70 71 2.304180 AGGAGTTCTTGTGGAGGTGATG 59.696 50.000 0.00 0.00 0.00 3.07
71 72 2.569404 GAGGAGTTCTTGTGGAGGTGAT 59.431 50.000 0.00 0.00 0.00 3.06
72 73 1.971357 GAGGAGTTCTTGTGGAGGTGA 59.029 52.381 0.00 0.00 0.00 4.02
73 74 1.002544 GGAGGAGTTCTTGTGGAGGTG 59.997 57.143 0.00 0.00 0.00 4.00
74 75 1.353091 GGAGGAGTTCTTGTGGAGGT 58.647 55.000 0.00 0.00 0.00 3.85
75 76 0.615850 GGGAGGAGTTCTTGTGGAGG 59.384 60.000 0.00 0.00 0.00 4.30
76 77 0.615850 GGGGAGGAGTTCTTGTGGAG 59.384 60.000 0.00 0.00 0.00 3.86
77 78 0.193574 AGGGGAGGAGTTCTTGTGGA 59.806 55.000 0.00 0.00 0.00 4.02
78 79 0.615850 GAGGGGAGGAGTTCTTGTGG 59.384 60.000 0.00 0.00 0.00 4.17
79 80 0.247736 CGAGGGGAGGAGTTCTTGTG 59.752 60.000 0.00 0.00 0.00 3.33
80 81 1.545706 GCGAGGGGAGGAGTTCTTGT 61.546 60.000 0.00 0.00 0.00 3.16
81 82 1.219393 GCGAGGGGAGGAGTTCTTG 59.781 63.158 0.00 0.00 0.00 3.02
82 83 2.352032 CGCGAGGGGAGGAGTTCTT 61.352 63.158 0.00 0.00 0.00 2.52
83 84 2.756283 CGCGAGGGGAGGAGTTCT 60.756 66.667 0.00 0.00 0.00 3.01
84 85 2.754658 TCGCGAGGGGAGGAGTTC 60.755 66.667 3.71 0.00 0.00 3.01
85 86 2.756283 CTCGCGAGGGGAGGAGTT 60.756 66.667 28.40 0.00 38.66 3.01
95 96 1.807573 GGAAGAACTGCCTCGCGAG 60.808 63.158 29.06 29.06 0.00 5.03
96 97 1.816863 AAGGAAGAACTGCCTCGCGA 61.817 55.000 9.26 9.26 32.07 5.87
97 98 0.951040 AAAGGAAGAACTGCCTCGCG 60.951 55.000 0.00 0.00 32.07 5.87
98 99 0.519077 CAAAGGAAGAACTGCCTCGC 59.481 55.000 1.36 0.00 32.07 5.03
99 100 1.884235 ACAAAGGAAGAACTGCCTCG 58.116 50.000 1.36 0.00 32.07 4.63
100 101 4.762251 ACAATACAAAGGAAGAACTGCCTC 59.238 41.667 1.36 0.00 32.07 4.70
101 102 4.729868 ACAATACAAAGGAAGAACTGCCT 58.270 39.130 0.00 0.00 35.61 4.75
102 103 5.009610 TGAACAATACAAAGGAAGAACTGCC 59.990 40.000 0.00 0.00 0.00 4.85
103 104 6.072112 TGAACAATACAAAGGAAGAACTGC 57.928 37.500 0.00 0.00 0.00 4.40
104 105 7.805071 GTGATGAACAATACAAAGGAAGAACTG 59.195 37.037 0.00 0.00 0.00 3.16
105 106 7.040409 GGTGATGAACAATACAAAGGAAGAACT 60.040 37.037 0.00 0.00 0.00 3.01
106 107 7.084486 GGTGATGAACAATACAAAGGAAGAAC 58.916 38.462 0.00 0.00 0.00 3.01
107 108 6.775142 TGGTGATGAACAATACAAAGGAAGAA 59.225 34.615 0.00 0.00 0.00 2.52
108 109 6.303054 TGGTGATGAACAATACAAAGGAAGA 58.697 36.000 0.00 0.00 0.00 2.87
109 110 6.573664 TGGTGATGAACAATACAAAGGAAG 57.426 37.500 0.00 0.00 0.00 3.46
110 111 5.048083 GCTGGTGATGAACAATACAAAGGAA 60.048 40.000 0.00 0.00 0.00 3.36
111 112 4.458989 GCTGGTGATGAACAATACAAAGGA 59.541 41.667 0.00 0.00 0.00 3.36
112 113 4.380867 GGCTGGTGATGAACAATACAAAGG 60.381 45.833 0.00 0.00 0.00 3.11
113 114 4.380867 GGGCTGGTGATGAACAATACAAAG 60.381 45.833 0.00 0.00 0.00 2.77
114 115 3.509575 GGGCTGGTGATGAACAATACAAA 59.490 43.478 0.00 0.00 0.00 2.83
115 116 3.088532 GGGCTGGTGATGAACAATACAA 58.911 45.455 0.00 0.00 0.00 2.41
116 117 2.620367 GGGGCTGGTGATGAACAATACA 60.620 50.000 0.00 0.00 0.00 2.29
117 118 2.024414 GGGGCTGGTGATGAACAATAC 58.976 52.381 0.00 0.00 0.00 1.89
118 119 1.922447 AGGGGCTGGTGATGAACAATA 59.078 47.619 0.00 0.00 0.00 1.90
119 120 0.706433 AGGGGCTGGTGATGAACAAT 59.294 50.000 0.00 0.00 0.00 2.71
120 121 0.251297 CAGGGGCTGGTGATGAACAA 60.251 55.000 0.00 0.00 0.00 2.83
121 122 1.133181 TCAGGGGCTGGTGATGAACA 61.133 55.000 0.00 0.00 31.51 3.18
122 123 0.393537 CTCAGGGGCTGGTGATGAAC 60.394 60.000 0.00 0.00 31.51 3.18
123 124 1.565390 CCTCAGGGGCTGGTGATGAA 61.565 60.000 0.00 0.00 31.51 2.57
124 125 1.997311 CCTCAGGGGCTGGTGATGA 60.997 63.158 0.00 0.00 31.51 2.92
125 126 2.593978 CCTCAGGGGCTGGTGATG 59.406 66.667 0.00 0.00 31.51 3.07
134 135 2.276740 GGTGGATTGCCTCAGGGG 59.723 66.667 0.00 0.00 38.36 4.79
135 136 1.379044 GTGGTGGATTGCCTCAGGG 60.379 63.158 0.00 0.00 34.31 4.45
136 137 0.962356 GTGTGGTGGATTGCCTCAGG 60.962 60.000 0.00 0.00 31.22 3.86
137 138 0.962356 GGTGTGGTGGATTGCCTCAG 60.962 60.000 0.00 0.00 31.22 3.35
138 139 1.074775 GGTGTGGTGGATTGCCTCA 59.925 57.895 0.00 0.00 34.31 3.86
139 140 1.074775 TGGTGTGGTGGATTGCCTC 59.925 57.895 0.00 0.00 34.31 4.70
140 141 1.228552 GTGGTGTGGTGGATTGCCT 60.229 57.895 0.00 0.00 34.31 4.75
141 142 1.112315 TTGTGGTGTGGTGGATTGCC 61.112 55.000 0.00 0.00 0.00 4.52
142 143 0.749649 TTTGTGGTGTGGTGGATTGC 59.250 50.000 0.00 0.00 0.00 3.56
143 144 2.031120 AGTTTGTGGTGTGGTGGATTG 58.969 47.619 0.00 0.00 0.00 2.67
144 145 2.452600 AGTTTGTGGTGTGGTGGATT 57.547 45.000 0.00 0.00 0.00 3.01
145 146 2.708861 TCTAGTTTGTGGTGTGGTGGAT 59.291 45.455 0.00 0.00 0.00 3.41
146 147 2.104111 CTCTAGTTTGTGGTGTGGTGGA 59.896 50.000 0.00 0.00 0.00 4.02
147 148 2.158813 ACTCTAGTTTGTGGTGTGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
148 149 3.194005 ACTCTAGTTTGTGGTGTGGTG 57.806 47.619 0.00 0.00 0.00 4.17
149 150 3.323979 CCTACTCTAGTTTGTGGTGTGGT 59.676 47.826 0.00 0.00 0.00 4.16
150 151 3.306780 CCCTACTCTAGTTTGTGGTGTGG 60.307 52.174 0.00 0.00 0.00 4.17
151 152 3.323979 ACCCTACTCTAGTTTGTGGTGTG 59.676 47.826 0.00 0.00 0.00 3.82
152 153 3.584294 ACCCTACTCTAGTTTGTGGTGT 58.416 45.455 0.00 0.00 0.00 4.16
153 154 5.934402 ATACCCTACTCTAGTTTGTGGTG 57.066 43.478 0.00 0.00 0.00 4.17
154 155 6.955851 TGTAATACCCTACTCTAGTTTGTGGT 59.044 38.462 0.00 0.00 0.00 4.16
155 156 7.263496 GTGTAATACCCTACTCTAGTTTGTGG 58.737 42.308 0.00 0.00 0.00 4.17
156 157 7.263496 GGTGTAATACCCTACTCTAGTTTGTG 58.737 42.308 0.00 0.00 44.15 3.33
157 158 7.415592 GGTGTAATACCCTACTCTAGTTTGT 57.584 40.000 0.00 0.00 44.15 2.83
181 182 0.322098 TAGTTCGGGCCACCATTGTG 60.322 55.000 4.39 0.00 42.39 3.33
182 183 0.035439 CTAGTTCGGGCCACCATTGT 60.035 55.000 4.39 0.00 36.13 2.71
183 184 0.035439 ACTAGTTCGGGCCACCATTG 60.035 55.000 4.39 0.00 36.13 2.82
184 185 1.575419 TACTAGTTCGGGCCACCATT 58.425 50.000 4.39 0.00 36.13 3.16
185 186 1.802553 ATACTAGTTCGGGCCACCAT 58.197 50.000 4.39 0.00 36.13 3.55
186 187 2.457813 TATACTAGTTCGGGCCACCA 57.542 50.000 4.39 0.00 36.13 4.17
187 188 3.461061 GTTTATACTAGTTCGGGCCACC 58.539 50.000 4.39 0.00 0.00 4.61
188 189 3.133542 AGGTTTATACTAGTTCGGGCCAC 59.866 47.826 4.39 0.00 0.00 5.01
189 190 3.377573 AGGTTTATACTAGTTCGGGCCA 58.622 45.455 4.39 0.00 0.00 5.36
190 191 3.551659 CGAGGTTTATACTAGTTCGGGCC 60.552 52.174 0.00 0.00 0.00 5.80
191 192 3.067320 ACGAGGTTTATACTAGTTCGGGC 59.933 47.826 13.65 0.00 0.00 6.13
192 193 4.096984 ACACGAGGTTTATACTAGTTCGGG 59.903 45.833 10.71 10.71 36.19 5.14
193 194 5.240713 ACACGAGGTTTATACTAGTTCGG 57.759 43.478 13.65 6.76 0.00 4.30
194 195 5.269313 GGACACGAGGTTTATACTAGTTCG 58.731 45.833 0.00 4.92 0.00 3.95
195 196 5.359292 AGGGACACGAGGTTTATACTAGTTC 59.641 44.000 0.00 0.00 0.00 3.01
196 197 5.267587 AGGGACACGAGGTTTATACTAGTT 58.732 41.667 0.00 0.00 0.00 2.24
197 198 4.864726 AGGGACACGAGGTTTATACTAGT 58.135 43.478 0.00 0.00 0.00 2.57
198 199 5.126707 ACAAGGGACACGAGGTTTATACTAG 59.873 44.000 0.00 0.00 0.00 2.57
199 200 5.018809 ACAAGGGACACGAGGTTTATACTA 58.981 41.667 0.00 0.00 0.00 1.82
200 201 3.836562 ACAAGGGACACGAGGTTTATACT 59.163 43.478 0.00 0.00 0.00 2.12
201 202 3.930848 CACAAGGGACACGAGGTTTATAC 59.069 47.826 0.00 0.00 0.00 1.47
202 203 3.579586 ACACAAGGGACACGAGGTTTATA 59.420 43.478 0.00 0.00 0.00 0.98
203 204 2.370849 ACACAAGGGACACGAGGTTTAT 59.629 45.455 0.00 0.00 0.00 1.40
204 205 1.764134 ACACAAGGGACACGAGGTTTA 59.236 47.619 0.00 0.00 0.00 2.01
205 206 0.544697 ACACAAGGGACACGAGGTTT 59.455 50.000 0.00 0.00 0.00 3.27
206 207 0.544697 AACACAAGGGACACGAGGTT 59.455 50.000 0.00 0.00 0.00 3.50
207 208 0.179056 CAACACAAGGGACACGAGGT 60.179 55.000 0.00 0.00 0.00 3.85
208 209 0.179056 ACAACACAAGGGACACGAGG 60.179 55.000 0.00 0.00 0.00 4.63
209 210 1.597663 GAACAACACAAGGGACACGAG 59.402 52.381 0.00 0.00 0.00 4.18
210 211 1.208535 AGAACAACACAAGGGACACGA 59.791 47.619 0.00 0.00 0.00 4.35
211 212 1.663695 AGAACAACACAAGGGACACG 58.336 50.000 0.00 0.00 0.00 4.49
212 213 2.031683 CGAAGAACAACACAAGGGACAC 59.968 50.000 0.00 0.00 0.00 3.67
213 214 2.285083 CGAAGAACAACACAAGGGACA 58.715 47.619 0.00 0.00 0.00 4.02
214 215 2.031683 CACGAAGAACAACACAAGGGAC 59.968 50.000 0.00 0.00 0.00 4.46
215 216 2.285083 CACGAAGAACAACACAAGGGA 58.715 47.619 0.00 0.00 0.00 4.20
216 217 2.014128 ACACGAAGAACAACACAAGGG 58.986 47.619 0.00 0.00 0.00 3.95
217 218 3.869246 ACTACACGAAGAACAACACAAGG 59.131 43.478 0.00 0.00 0.00 3.61
218 219 5.464965 AACTACACGAAGAACAACACAAG 57.535 39.130 0.00 0.00 0.00 3.16
219 220 5.866335 AAACTACACGAAGAACAACACAA 57.134 34.783 0.00 0.00 0.00 3.33
220 221 6.331845 TCTAAACTACACGAAGAACAACACA 58.668 36.000 0.00 0.00 0.00 3.72
221 222 6.817270 TCTAAACTACACGAAGAACAACAC 57.183 37.500 0.00 0.00 0.00 3.32
222 223 6.643770 GGATCTAAACTACACGAAGAACAACA 59.356 38.462 0.00 0.00 0.00 3.33
223 224 6.867293 AGGATCTAAACTACACGAAGAACAAC 59.133 38.462 0.00 0.00 0.00 3.32
224 225 6.989659 AGGATCTAAACTACACGAAGAACAA 58.010 36.000 0.00 0.00 0.00 2.83
225 226 6.585695 AGGATCTAAACTACACGAAGAACA 57.414 37.500 0.00 0.00 0.00 3.18
226 227 6.183360 GCAAGGATCTAAACTACACGAAGAAC 60.183 42.308 0.00 0.00 0.00 3.01
227 228 5.867716 GCAAGGATCTAAACTACACGAAGAA 59.132 40.000 0.00 0.00 0.00 2.52
228 229 5.408356 GCAAGGATCTAAACTACACGAAGA 58.592 41.667 0.00 0.00 0.00 2.87
229 230 4.265556 CGCAAGGATCTAAACTACACGAAG 59.734 45.833 0.00 0.00 0.00 3.79
230 231 4.082625 TCGCAAGGATCTAAACTACACGAA 60.083 41.667 0.00 0.00 38.47 3.85
231 232 3.441222 TCGCAAGGATCTAAACTACACGA 59.559 43.478 0.00 0.00 38.47 4.35
232 233 3.766151 TCGCAAGGATCTAAACTACACG 58.234 45.455 0.00 0.00 38.47 4.49
233 234 4.113354 CCTCGCAAGGATCTAAACTACAC 58.887 47.826 0.00 0.00 46.67 2.90
234 235 3.430374 GCCTCGCAAGGATCTAAACTACA 60.430 47.826 0.00 0.00 46.67 2.74
235 236 3.124560 GCCTCGCAAGGATCTAAACTAC 58.875 50.000 0.00 0.00 46.67 2.73
236 237 2.223735 CGCCTCGCAAGGATCTAAACTA 60.224 50.000 0.00 0.00 46.67 2.24
237 238 1.471676 CGCCTCGCAAGGATCTAAACT 60.472 52.381 0.00 0.00 46.67 2.66
238 239 0.931005 CGCCTCGCAAGGATCTAAAC 59.069 55.000 0.00 0.00 46.67 2.01
239 240 0.821517 TCGCCTCGCAAGGATCTAAA 59.178 50.000 0.00 0.00 46.67 1.85
240 241 0.102481 GTCGCCTCGCAAGGATCTAA 59.898 55.000 0.00 0.00 46.67 2.10
241 242 1.734137 GTCGCCTCGCAAGGATCTA 59.266 57.895 0.00 0.00 46.67 1.98
242 243 2.496817 GTCGCCTCGCAAGGATCT 59.503 61.111 0.00 0.00 46.67 2.75
243 244 2.956964 CGTCGCCTCGCAAGGATC 60.957 66.667 0.00 0.00 46.67 3.36
244 245 3.417275 CTCGTCGCCTCGCAAGGAT 62.417 63.158 0.00 0.00 46.67 3.24
245 246 4.116328 CTCGTCGCCTCGCAAGGA 62.116 66.667 0.00 0.00 46.67 3.36
246 247 4.116328 TCTCGTCGCCTCGCAAGG 62.116 66.667 0.00 0.00 46.44 3.61
247 248 2.874010 ATGTCTCGTCGCCTCGCAAG 62.874 60.000 0.00 0.00 0.00 4.01
248 249 1.650314 TATGTCTCGTCGCCTCGCAA 61.650 55.000 0.00 0.00 0.00 4.85
249 250 2.048312 CTATGTCTCGTCGCCTCGCA 62.048 60.000 0.00 0.00 0.00 5.10
250 251 1.369448 CTATGTCTCGTCGCCTCGC 60.369 63.158 0.00 0.00 0.00 5.03
251 252 1.280142 CCTATGTCTCGTCGCCTCG 59.720 63.158 0.00 0.00 0.00 4.63
252 253 1.590932 TACCTATGTCTCGTCGCCTC 58.409 55.000 0.00 0.00 0.00 4.70
253 254 1.948145 CTTACCTATGTCTCGTCGCCT 59.052 52.381 0.00 0.00 0.00 5.52
254 255 1.674962 ACTTACCTATGTCTCGTCGCC 59.325 52.381 0.00 0.00 0.00 5.54
255 256 3.059051 CCTACTTACCTATGTCTCGTCGC 60.059 52.174 0.00 0.00 0.00 5.19
256 257 4.375272 TCCTACTTACCTATGTCTCGTCG 58.625 47.826 0.00 0.00 0.00 5.12
257 258 4.756135 CCTCCTACTTACCTATGTCTCGTC 59.244 50.000 0.00 0.00 0.00 4.20
258 259 4.165758 ACCTCCTACTTACCTATGTCTCGT 59.834 45.833 0.00 0.00 0.00 4.18
259 260 4.515944 CACCTCCTACTTACCTATGTCTCG 59.484 50.000 0.00 0.00 0.00 4.04
260 261 5.299782 CACACCTCCTACTTACCTATGTCTC 59.700 48.000 0.00 0.00 0.00 3.36
261 262 5.044328 TCACACCTCCTACTTACCTATGTCT 60.044 44.000 0.00 0.00 0.00 3.41
262 263 5.198965 TCACACCTCCTACTTACCTATGTC 58.801 45.833 0.00 0.00 0.00 3.06
263 264 5.202746 TCACACCTCCTACTTACCTATGT 57.797 43.478 0.00 0.00 0.00 2.29
264 265 6.071984 AGATCACACCTCCTACTTACCTATG 58.928 44.000 0.00 0.00 0.00 2.23
265 266 6.282568 AGATCACACCTCCTACTTACCTAT 57.717 41.667 0.00 0.00 0.00 2.57
266 267 5.398809 GGAGATCACACCTCCTACTTACCTA 60.399 48.000 0.00 0.00 45.18 3.08
267 268 4.538738 GAGATCACACCTCCTACTTACCT 58.461 47.826 0.00 0.00 0.00 3.08
268 269 3.637694 GGAGATCACACCTCCTACTTACC 59.362 52.174 0.00 0.00 45.18 2.85
269 270 3.315749 CGGAGATCACACCTCCTACTTAC 59.684 52.174 0.00 0.00 46.15 2.34
270 271 3.552875 CGGAGATCACACCTCCTACTTA 58.447 50.000 0.00 0.00 46.15 2.24
271 272 2.379972 CGGAGATCACACCTCCTACTT 58.620 52.381 0.00 0.00 46.15 2.24
272 273 2.024825 GCGGAGATCACACCTCCTACT 61.025 57.143 0.00 0.00 46.15 2.57
273 274 0.386113 GCGGAGATCACACCTCCTAC 59.614 60.000 0.00 0.00 46.15 3.18
274 275 1.101635 CGCGGAGATCACACCTCCTA 61.102 60.000 0.00 0.00 46.15 2.94
275 276 2.418910 CGCGGAGATCACACCTCCT 61.419 63.158 0.00 0.00 46.15 3.69
276 277 2.105128 CGCGGAGATCACACCTCC 59.895 66.667 0.00 0.00 45.16 4.30
277 278 2.583593 GCGCGGAGATCACACCTC 60.584 66.667 8.83 0.00 0.00 3.85
278 279 4.498520 CGCGCGGAGATCACACCT 62.499 66.667 24.84 0.00 0.00 4.00
279 280 3.405592 TACGCGCGGAGATCACACC 62.406 63.158 35.22 0.00 0.00 4.16
280 281 2.101575 TACGCGCGGAGATCACAC 59.898 61.111 35.22 0.00 0.00 3.82
281 282 2.101575 GTACGCGCGGAGATCACA 59.898 61.111 35.22 5.15 0.00 3.58
282 283 2.654404 GGTACGCGCGGAGATCAC 60.654 66.667 35.22 19.42 0.00 3.06
283 284 3.896133 GGGTACGCGCGGAGATCA 61.896 66.667 35.22 8.58 0.00 2.92
284 285 4.642542 GGGGTACGCGCGGAGATC 62.643 72.222 35.22 18.65 0.00 2.75
293 294 0.735287 GTTCGAACTCTGGGGTACGC 60.735 60.000 20.97 0.29 43.69 4.42
294 295 0.108945 GGTTCGAACTCTGGGGTACG 60.109 60.000 26.32 0.00 0.00 3.67
295 296 1.264295 AGGTTCGAACTCTGGGGTAC 58.736 55.000 26.32 7.68 0.00 3.34
296 297 1.621814 CAAGGTTCGAACTCTGGGGTA 59.378 52.381 26.32 0.00 0.00 3.69
297 298 0.396811 CAAGGTTCGAACTCTGGGGT 59.603 55.000 26.32 5.73 0.00 4.95
298 299 0.685097 TCAAGGTTCGAACTCTGGGG 59.315 55.000 26.32 14.53 0.00 4.96
299 300 1.338200 CCTCAAGGTTCGAACTCTGGG 60.338 57.143 26.32 21.47 0.00 4.45
300 301 1.338200 CCCTCAAGGTTCGAACTCTGG 60.338 57.143 26.32 18.56 0.00 3.86
301 302 2.086054 CCCTCAAGGTTCGAACTCTG 57.914 55.000 26.32 21.77 0.00 3.35
312 313 2.592993 TTCCGGCAGACCCTCAAGG 61.593 63.158 0.00 0.00 43.78 3.61
313 314 1.376037 GTTCCGGCAGACCCTCAAG 60.376 63.158 0.00 0.00 0.00 3.02
314 315 2.747686 GTTCCGGCAGACCCTCAA 59.252 61.111 0.00 0.00 0.00 3.02
315 316 3.319198 GGTTCCGGCAGACCCTCA 61.319 66.667 0.00 0.00 0.00 3.86
327 328 1.022982 GGTGTCGGATTTCGGGTTCC 61.023 60.000 0.00 0.00 39.77 3.62
328 329 1.356527 CGGTGTCGGATTTCGGGTTC 61.357 60.000 0.00 0.00 39.77 3.62
329 330 1.375013 CGGTGTCGGATTTCGGGTT 60.375 57.895 0.00 0.00 39.77 4.11
330 331 2.263540 CGGTGTCGGATTTCGGGT 59.736 61.111 0.00 0.00 39.77 5.28
331 332 1.808390 GACGGTGTCGGATTTCGGG 60.808 63.158 0.00 0.00 41.39 5.14
332 333 1.808390 GGACGGTGTCGGATTTCGG 60.808 63.158 0.00 0.00 41.39 4.30
333 334 1.080366 TGGACGGTGTCGGATTTCG 60.080 57.895 0.00 0.00 41.39 3.46
334 335 0.320073 TGTGGACGGTGTCGGATTTC 60.320 55.000 0.00 0.00 41.39 2.17
335 336 0.323629 ATGTGGACGGTGTCGGATTT 59.676 50.000 0.00 0.00 41.39 2.17
336 337 0.108329 GATGTGGACGGTGTCGGATT 60.108 55.000 0.00 0.00 41.39 3.01
337 338 1.515954 GATGTGGACGGTGTCGGAT 59.484 57.895 0.00 0.00 41.39 4.18
338 339 2.642254 GGATGTGGACGGTGTCGGA 61.642 63.158 0.00 0.00 41.39 4.55
339 340 2.125673 GGATGTGGACGGTGTCGG 60.126 66.667 0.00 0.00 41.39 4.79
340 341 1.446099 CTGGATGTGGACGGTGTCG 60.446 63.158 0.00 0.00 43.02 4.35
341 342 1.741770 GCTGGATGTGGACGGTGTC 60.742 63.158 0.00 0.00 0.00 3.67
342 343 2.347490 GCTGGATGTGGACGGTGT 59.653 61.111 0.00 0.00 0.00 4.16
343 344 2.034879 GTGCTGGATGTGGACGGTG 61.035 63.158 0.00 0.00 0.00 4.94
344 345 2.347490 GTGCTGGATGTGGACGGT 59.653 61.111 0.00 0.00 0.00 4.83
367 368 1.781429 CTCGTCAGAGTTTGTCGTGTG 59.219 52.381 0.72 0.00 39.02 3.82
368 369 1.674441 TCTCGTCAGAGTTTGTCGTGT 59.326 47.619 0.72 0.00 44.65 4.49
369 370 2.401017 TCTCGTCAGAGTTTGTCGTG 57.599 50.000 0.72 0.00 44.65 4.35
370 371 3.066342 TCTTTCTCGTCAGAGTTTGTCGT 59.934 43.478 0.72 0.00 44.65 4.34
371 372 3.629058 TCTTTCTCGTCAGAGTTTGTCG 58.371 45.455 0.00 0.00 44.65 4.35
381 382 1.919240 TGCCCTACTCTTTCTCGTCA 58.081 50.000 0.00 0.00 0.00 4.35
398 399 0.308684 CATGCCCACGTCACATATGC 59.691 55.000 1.58 0.00 0.00 3.14
401 402 1.451207 GGCATGCCCACGTCACATA 60.451 57.895 27.24 0.00 0.00 2.29
402 403 2.751436 GGCATGCCCACGTCACAT 60.751 61.111 27.24 0.00 0.00 3.21
403 404 3.952508 AGGCATGCCCACGTCACA 61.953 61.111 33.14 0.00 36.58 3.58
404 405 3.434319 CAGGCATGCCCACGTCAC 61.434 66.667 33.14 5.59 36.58 3.67
405 406 4.720902 CCAGGCATGCCCACGTCA 62.721 66.667 33.14 0.00 36.58 4.35
432 433 1.733399 GTCCTGTCTTCCGCGTGTC 60.733 63.158 4.92 0.00 0.00 3.67
438 439 3.685214 CTCCGCGTCCTGTCTTCCG 62.685 68.421 4.92 0.00 0.00 4.30
459 460 4.953868 CGGTTGTGGCGACGTCCA 62.954 66.667 10.58 0.00 0.00 4.02
494 495 4.823790 AAAGCGGACGACACTTTTTAAT 57.176 36.364 0.00 0.00 29.51 1.40
547 550 9.108284 CAATTTTCATTTAAACCAGACCAAGTT 57.892 29.630 0.00 0.00 0.00 2.66
549 552 7.307930 GGCAATTTTCATTTAAACCAGACCAAG 60.308 37.037 0.00 0.00 0.00 3.61
573 576 3.310501 GGCAAATTTCATGCACATTAGGC 59.689 43.478 3.19 0.00 45.60 3.93
580 583 0.246086 TCCGGGCAAATTTCATGCAC 59.754 50.000 0.00 0.00 45.60 4.57
593 596 9.921637 TTTAAAATGAATATGAATAATCCGGGC 57.078 29.630 0.00 0.00 0.00 6.13
606 609 9.787532 CGTCCAGACACATTTTAAAATGAATAT 57.212 29.630 35.99 22.08 46.72 1.28
626 629 0.874390 CCCACACATCAAACGTCCAG 59.126 55.000 0.00 0.00 0.00 3.86
661 664 2.125673 CGCGGACAGTGTTAGGGG 60.126 66.667 0.00 0.00 0.00 4.79
681 685 3.809279 CACATTATCTATCCGCACAAGCA 59.191 43.478 0.00 0.00 42.27 3.91
693 697 6.819649 CACCCTTAAAACGGACACATTATCTA 59.180 38.462 0.00 0.00 0.00 1.98
699 703 2.882137 CACACCCTTAAAACGGACACAT 59.118 45.455 0.00 0.00 0.00 3.21
713 717 1.003355 CATCTCCAACGCACACCCT 60.003 57.895 0.00 0.00 0.00 4.34
724 728 2.369860 GTCACATATCAGGGCATCTCCA 59.630 50.000 0.00 0.00 36.21 3.86
754 758 5.505654 CGTTGCTCCACATTACTTTGTCTTT 60.506 40.000 0.00 0.00 0.00 2.52
755 759 4.024048 CGTTGCTCCACATTACTTTGTCTT 60.024 41.667 0.00 0.00 0.00 3.01
756 760 3.498397 CGTTGCTCCACATTACTTTGTCT 59.502 43.478 0.00 0.00 0.00 3.41
820 824 2.564062 CAAACAGGTCATGAGGGCATTT 59.436 45.455 0.00 0.00 30.68 2.32
836 969 3.056536 TGCTGCAACAAGGTAAACAAACA 60.057 39.130 0.00 0.00 0.00 2.83
875 1008 1.841663 TTCGTGAAAAGCTGAGCGGC 61.842 55.000 0.00 0.00 0.00 6.53
901 1034 1.807573 CGGAGCTGAGCGGAGTTTC 60.808 63.158 0.00 0.00 0.00 2.78
902 1035 2.262915 CGGAGCTGAGCGGAGTTT 59.737 61.111 0.00 0.00 0.00 2.66
903 1036 3.764466 CCGGAGCTGAGCGGAGTT 61.764 66.667 0.00 0.00 0.00 3.01
932 1190 1.992277 GAGGGGCAGCAGGAGAGAA 60.992 63.158 0.00 0.00 0.00 2.87
982 1247 1.482593 CATGGTCGAAGGAGGCTAAGT 59.517 52.381 0.00 0.00 0.00 2.24
984 1249 0.178068 GCATGGTCGAAGGAGGCTAA 59.822 55.000 0.00 0.00 0.00 3.09
1112 1377 2.915659 TCGGCACCTCTTCACGGT 60.916 61.111 0.00 0.00 34.38 4.83
1184 1449 1.215655 CGTCGATTTCGGATCTGGCC 61.216 60.000 0.62 0.00 40.29 5.36
1747 2012 1.659233 CGGCAATCAACCTGTGCAA 59.341 52.632 0.00 0.00 40.12 4.08
1846 2111 1.693083 GGACGCACACCGATGCTTAC 61.693 60.000 5.03 0.00 43.80 2.34
1854 2119 3.027170 GCATTCTGGACGCACACCG 62.027 63.158 0.00 0.00 44.21 4.94
1914 2179 1.072965 AGCAACCTCTCAAGACAAGGG 59.927 52.381 0.00 0.00 34.31 3.95
2077 2342 2.418746 CGAACATGGGAAGACGATCCTT 60.419 50.000 0.00 0.00 39.57 3.36
2162 2427 6.546395 ACAACTCAAGTGATATGCGATTTTC 58.454 36.000 0.00 0.00 0.00 2.29
2261 2526 5.535030 TCTGTACAGCTAAAGTCTTGACTGA 59.465 40.000 18.45 0.00 0.00 3.41
2372 2637 4.924305 ACACAACTAAGAGTTACCGACA 57.076 40.909 0.00 0.00 36.03 4.35
2499 2764 2.508439 CGGTGCTTACGACGCCAT 60.508 61.111 0.00 0.00 37.56 4.40
2538 2803 9.507329 TCCAATGCTATTGTCTTTATAGGAATC 57.493 33.333 7.71 0.00 31.10 2.52
2541 2806 9.288576 CATTCCAATGCTATTGTCTTTATAGGA 57.711 33.333 7.71 0.00 31.74 2.94
2808 3073 0.451783 GTCAACATGCGAATGGGTCC 59.548 55.000 8.61 0.00 0.00 4.46
2811 3076 2.164017 TCAATGTCAACATGCGAATGGG 59.836 45.455 8.61 0.00 36.56 4.00
2829 3094 1.573108 TGGGCCAAAACTGGTTTCAA 58.427 45.000 2.13 0.00 31.45 2.69
2852 3117 3.431572 GCTGATAAGCAAGAATAGCTCCG 59.568 47.826 0.00 0.00 42.53 4.63
2896 3162 3.740141 GCTGCAGCTGCCATTATTGATTT 60.740 43.478 34.64 0.00 41.18 2.17
2909 3175 0.956633 TTCTTCTTTGGCTGCAGCTG 59.043 50.000 35.82 22.82 41.70 4.24
2965 3231 7.578310 TTTCTATAGTACGCAACCTAGTGAT 57.422 36.000 0.00 0.00 0.00 3.06
2966 3232 7.067859 ACATTTCTATAGTACGCAACCTAGTGA 59.932 37.037 0.00 0.00 0.00 3.41
2967 3233 7.201145 ACATTTCTATAGTACGCAACCTAGTG 58.799 38.462 0.00 0.00 0.00 2.74
2968 3234 7.344095 ACATTTCTATAGTACGCAACCTAGT 57.656 36.000 0.00 0.00 0.00 2.57
2969 3235 9.343103 CATACATTTCTATAGTACGCAACCTAG 57.657 37.037 0.00 0.00 0.00 3.02
2970 3236 8.301720 CCATACATTTCTATAGTACGCAACCTA 58.698 37.037 0.00 0.00 0.00 3.08
2971 3237 7.014905 TCCATACATTTCTATAGTACGCAACCT 59.985 37.037 0.00 0.00 0.00 3.50
2972 3238 7.149973 TCCATACATTTCTATAGTACGCAACC 58.850 38.462 0.00 0.00 0.00 3.77
2973 3239 8.583810 TTCCATACATTTCTATAGTACGCAAC 57.416 34.615 0.00 0.00 0.00 4.17
2974 3240 9.037737 GTTTCCATACATTTCTATAGTACGCAA 57.962 33.333 0.00 0.00 0.00 4.85
2975 3241 8.198778 TGTTTCCATACATTTCTATAGTACGCA 58.801 33.333 0.00 0.00 0.00 5.24
2976 3242 8.583810 TGTTTCCATACATTTCTATAGTACGC 57.416 34.615 0.00 0.00 0.00 4.42
2977 3243 8.700644 GCTGTTTCCATACATTTCTATAGTACG 58.299 37.037 0.00 0.00 0.00 3.67
2978 3244 8.989980 GGCTGTTTCCATACATTTCTATAGTAC 58.010 37.037 0.00 0.00 0.00 2.73
2979 3245 8.934697 AGGCTGTTTCCATACATTTCTATAGTA 58.065 33.333 0.00 0.00 0.00 1.82
2980 3246 7.806180 AGGCTGTTTCCATACATTTCTATAGT 58.194 34.615 0.00 0.00 0.00 2.12
2981 3247 8.153550 AGAGGCTGTTTCCATACATTTCTATAG 58.846 37.037 0.00 0.00 0.00 1.31
2982 3248 8.034313 AGAGGCTGTTTCCATACATTTCTATA 57.966 34.615 0.00 0.00 0.00 1.31
2983 3249 6.904626 AGAGGCTGTTTCCATACATTTCTAT 58.095 36.000 0.00 0.00 0.00 1.98
2984 3250 6.313519 AGAGGCTGTTTCCATACATTTCTA 57.686 37.500 0.00 0.00 0.00 2.10
2985 3251 5.184892 AGAGGCTGTTTCCATACATTTCT 57.815 39.130 0.00 0.00 0.00 2.52
2986 3252 5.904362 AAGAGGCTGTTTCCATACATTTC 57.096 39.130 0.00 0.00 0.00 2.17
2987 3253 6.245408 TGTAAGAGGCTGTTTCCATACATTT 58.755 36.000 0.90 0.00 0.00 2.32
2988 3254 5.815581 TGTAAGAGGCTGTTTCCATACATT 58.184 37.500 0.90 0.00 0.00 2.71
2989 3255 5.189736 TCTGTAAGAGGCTGTTTCCATACAT 59.810 40.000 0.90 0.00 38.67 2.29
2990 3256 4.530553 TCTGTAAGAGGCTGTTTCCATACA 59.469 41.667 0.90 0.00 38.67 2.29
2991 3257 5.086104 TCTGTAAGAGGCTGTTTCCATAC 57.914 43.478 0.90 0.00 38.67 2.39
3005 3271 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
3006 3272 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
3007 3273 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
3008 3274 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
3009 3275 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
3010 3276 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
3011 3277 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
3012 3278 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
3013 3279 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
3014 3280 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
3015 3281 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
3016 3282 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
3017 3283 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
3018 3284 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
3019 3285 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
3020 3286 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
3021 3287 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
3022 3288 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
3023 3289 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
3024 3290 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
3025 3291 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
3026 3292 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
3027 3293 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
3028 3294 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
3029 3295 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
3030 3296 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
3031 3297 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
3041 3307 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
3042 3308 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3043 3309 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3044 3310 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3045 3311 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3046 3312 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3047 3313 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3048 3314 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
3049 3315 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
3050 3316 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
3051 3317 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
3052 3318 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
3053 3319 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
3054 3320 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
3055 3321 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
3056 3322 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
3057 3323 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
3058 3324 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
3059 3325 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
3071 3337 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3074 3340 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3075 3341 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3076 3342 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3077 3343 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3083 3349 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
3084 3350 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
3085 3351 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
3086 3352 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
3087 3353 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
3111 3377 7.732025 TGTCAGTCCTAGTGATGTTCTAAAAA 58.268 34.615 0.00 0.00 29.14 1.94
3112 3378 7.232737 TCTGTCAGTCCTAGTGATGTTCTAAAA 59.767 37.037 0.00 0.00 29.14 1.52
3113 3379 6.719829 TCTGTCAGTCCTAGTGATGTTCTAAA 59.280 38.462 0.00 0.00 29.14 1.85
3114 3380 6.246163 TCTGTCAGTCCTAGTGATGTTCTAA 58.754 40.000 0.00 0.00 29.14 2.10
3115 3381 5.816682 TCTGTCAGTCCTAGTGATGTTCTA 58.183 41.667 0.00 0.00 29.14 2.10
3116 3382 4.667573 TCTGTCAGTCCTAGTGATGTTCT 58.332 43.478 0.00 0.00 29.14 3.01
3117 3383 5.590530 ATCTGTCAGTCCTAGTGATGTTC 57.409 43.478 0.00 0.00 29.14 3.18
3118 3384 5.481824 TCAATCTGTCAGTCCTAGTGATGTT 59.518 40.000 0.00 0.00 29.14 2.71
3119 3385 5.019470 TCAATCTGTCAGTCCTAGTGATGT 58.981 41.667 0.00 0.00 29.14 3.06
3120 3386 5.588958 TCAATCTGTCAGTCCTAGTGATG 57.411 43.478 0.00 0.00 29.14 3.07
3157 3423 7.902920 AGCCAAAATGACCATGATAAACTAT 57.097 32.000 0.00 0.00 0.00 2.12
3193 3459 5.948992 AGAAAACTAGCCAAATGTGACTC 57.051 39.130 0.00 0.00 0.00 3.36
3201 3471 7.775053 AATGTCCATTAGAAAACTAGCCAAA 57.225 32.000 0.00 0.00 0.00 3.28
3278 3552 3.663995 TTCCCGACGAAACAACATAGA 57.336 42.857 0.00 0.00 0.00 1.98
3531 3895 9.625646 TGTGGAACTTGATGCTAAATACGGAGT 62.626 40.741 0.00 0.00 41.69 3.85
3532 3896 5.006746 GTGGAACTTGATGCTAAATACGGAG 59.993 44.000 0.00 0.00 0.00 4.63
3533 3897 4.873827 GTGGAACTTGATGCTAAATACGGA 59.126 41.667 0.00 0.00 0.00 4.69
3534 3898 4.634004 TGTGGAACTTGATGCTAAATACGG 59.366 41.667 0.00 0.00 38.04 4.02
3535 3899 5.727791 GCTGTGGAACTTGATGCTAAATACG 60.728 44.000 0.00 0.00 38.04 3.06
3564 3928 4.939439 AGGAAATAACGGGTGTGATGTTAC 59.061 41.667 0.00 0.00 31.50 2.50
3580 3944 1.565759 AGGCCACTGATGCAGGAAATA 59.434 47.619 5.01 0.00 35.51 1.40
3694 4059 3.449737 CCCAGATTCTTGCCATGACAAAT 59.550 43.478 0.00 0.00 0.00 2.32
3699 4064 0.396139 GCCCCAGATTCTTGCCATGA 60.396 55.000 0.00 0.00 0.00 3.07
3715 4080 1.063717 TGGATCCCAGATTCTTTGCCC 60.064 52.381 9.90 0.00 0.00 5.36
3727 4092 1.067295 AAGCTGTTCACTGGATCCCA 58.933 50.000 9.90 0.00 0.00 4.37
3784 4149 6.130569 AGATATCGGACAGACTAAGGAAAGT 58.869 40.000 0.00 0.00 0.00 2.66
3801 4166 4.036498 ACTTCGGTACCACAAGAGATATCG 59.964 45.833 22.07 1.07 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.