AutoCloner

Multiple sequence alignment - TraesCS5B01G166600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5B01G166600	chr5B	100.000	3827	0	0	1	3827	308790181	308794007	0.000000e+00	7068.0
1	TraesCS5B01G166600	chr5B	97.391	345	9	0	1	345	308758494	308758838	4.260000e-164	588.0
2	TraesCS5B01G166600	chr5B	93.966	348	12	5	1	345	512219818	512220159	5.670000e-143	518.0
3	TraesCS5B01G166600	chr5B	100.000	124	0	0	2995	3118	53657050	53657173	2.970000e-56	230.0
4	TraesCS5B01G166600	chr5B	99.213	127	0	1	2995	3121	458934504	458934379	1.070000e-55	228.0
5	TraesCS5B01G166600	chr5B	88.276	145	17	0	1244	1388	43884298	43884442	1.410000e-39	174.0
6	TraesCS5B01G166600	chr5B	86.624	157	21	0	1244	1400	44231459	44231303	1.410000e-39	174.0
7	TraesCS5B01G166600	chr5D	95.614	2645	95	14	340	2974	273059747	273062380	0.000000e+00	4222.0
8	TraesCS5B01G166600	chr5D	90.694	720	24	14	3116	3827	273062366	273063050	0.000000e+00	918.0
9	TraesCS5B01G166600	chr5D	72.185	737	157	32	2097	2821	80300591	80301291	8.450000e-42	182.0
10	TraesCS5B01G166600	chr5D	88.276	145	17	0	1244	1388	44488974	44489118	1.410000e-39	174.0
11	TraesCS5B01G166600	chr5D	77.835	194	40	3	432	624	344891262	344891071	2.420000e-22	117.0
12	TraesCS5B01G166600	chr5A	96.771	2075	59	2	906	2972	362376543	362378617	0.000000e+00	3454.0
13	TraesCS5B01G166600	chr5A	93.400	500	24	3	3330	3827	362378911	362379403	0.000000e+00	732.0
14	TraesCS5B01G166600	chr5A	92.273	220	12	2	3116	3331	362378605	362378823	1.340000e-79	307.0
15	TraesCS5B01G166600	chr5A	100.000	124	0	0	2995	3118	10041762	10041885	2.970000e-56	230.0
16	TraesCS5B01G166600	chr5A	100.000	124	0	0	2991	3114	104599305	104599182	2.970000e-56	230.0
17	TraesCS5B01G166600	chr5A	87.586	145	18	0	1244	1388	34903678	34903822	6.580000e-38	169.0
18	TraesCS5B01G166600	chr5A	86.517	89	11	1	484	572	31282944	31283031	3.150000e-16	97.1
19	TraesCS5B01G166600	chr5A	95.652	46	1	1	760	804	362376143	362376188	5.300000e-09	73.1
20	TraesCS5B01G166600	chr6B	94.220	346	14	4	1	345	555838481	555838821	1.220000e-144	523.0
21	TraesCS5B01G166600	chr6B	93.064	346	20	3	1	345	422685887	422686229	1.590000e-138	503.0
22	TraesCS5B01G166600	chr6B	93.084	347	19	5	1	345	555815541	555815198	1.590000e-138	503.0
23	TraesCS5B01G166600	chr6B	92.877	351	18	4	1	345	633183721	633184070	1.590000e-138	503.0
24	TraesCS5B01G166600	chr2B	95.950	321	12	1	31	351	668454886	668454567	1.580000e-143	520.0
25	TraesCS5B01G166600	chr2B	100.000	126	0	0	2995	3120	763841147	763841272	2.300000e-57	233.0
26	TraesCS5B01G166600	chr3B	92.550	349	22	4	1	345	526760699	526761047	7.380000e-137	497.0
27	TraesCS5B01G166600	chr4B	92.571	350	17	5	3	345	443025826	443026173	9.550000e-136	494.0
28	TraesCS5B01G166600	chr4B	96.992	133	2	1	2995	3127	408852281	408852151	4.980000e-54	222.0
29	TraesCS5B01G166600	chr2A	99.219	128	1	0	2995	3122	644083433	644083306	8.270000e-57	231.0
30	TraesCS5B01G166600	chr2A	100.000	124	0	0	2995	3118	739447428	739447305	2.970000e-56	230.0
31	TraesCS5B01G166600	chr2A	79.675	123	24	1	490	611	549981886	549981764	1.890000e-13	87.9
32	TraesCS5B01G166600	chr6A	100.000	121	0	0	2995	3115	310143812	310143932	1.380000e-54	224.0
33	TraesCS5B01G166600	chr7B	88.060	134	16	0	1247	1380	699372091	699372224	3.960000e-35	159.0
34	TraesCS5B01G166600	chrUn	83.636	165	26	1	1225	1389	65786935	65786772	1.840000e-33	154.0
35	TraesCS5B01G166600	chr7D	87.313	134	17	0	1247	1380	610782548	610782415	1.840000e-33	154.0
36	TraesCS5B01G166600	chr7D	86.207	58	8	0	515	572	256185278	256185335	3.190000e-06	63.9
37	TraesCS5B01G166600	chr2D	79.904	209	37	5	431	637	545846597	545846392	8.570000e-32	148.0
38	TraesCS5B01G166600	chr2D	80.899	89	16	1	485	572	54108901	54108813	6.860000e-08	69.4
39	TraesCS5B01G166600	chr6D	86.765	68	7	2	480	546	6768432	6768366	1.470000e-09	75.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5B01G166600	chr5B	308790181	308794007	3826	False	7068.000	7068	100.000	1	3827	1	chr5B.!!$F4	3826
1	TraesCS5B01G166600	chr5D	273059747	273063050	3303	False	2570.000	4222	93.154	340	3827	2	chr5D.!!$F3	3487
2	TraesCS5B01G166600	chr5A	362376143	362379403	3260	False	1141.525	3454	94.524	760	3827	4	chr5A.!!$F4	3067

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
201	202	0.035439	ACAATGGTGGCCCGAACTAG	60.035	55.0	0.00	0.00	0.00	2.57	F
259	260	0.102481	TTAGATCCTTGCGAGGCGAC	59.898	55.0	16.01	8.73	43.21	5.19	F
313	314	0.108945	CGTACCCCAGAGTTCGAACC	60.109	60.0	24.22	15.46	32.95	3.62	F
1747	2012	0.109086	CCGCATCACAGAGTTCTCGT	60.109	55.0	0.00	0.00	0.00	4.18	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1914	2179	1.072965	AGCAACCTCTCAAGACAAGGG	59.927	52.381	0.00	34.31	3.95	R
2077	2342	2.418746	CGAACATGGGAAGACGATCCTT	60.419	50.000	0.00	39.57	3.36	R
2261	2526	5.535030	TCTGTACAGCTAAAGTCTTGACTGA	59.465	40.000	18.45	0.00	3.41	R
3016	3282	0.248289	GTACGCAGCCTTTCCCTACA	59.752	55.000	0.00	0.00	2.74	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
19	20	2.848678	ATAGGACTAGCCACCACAGA	57.151	50.000	6.07	0.00	40.02	3.41
20	21	2.145397	TAGGACTAGCCACCACAGAG	57.855	55.000	6.07	0.00	40.02	3.35
21	22	0.115349	AGGACTAGCCACCACAGAGT	59.885	55.000	6.07	0.00	40.02	3.24
22	23	1.358103	AGGACTAGCCACCACAGAGTA	59.642	52.381	6.07	0.00	40.02	2.59
23	24	1.751924	GGACTAGCCACCACAGAGTAG	59.248	57.143	0.00	0.00	36.34	2.57
24	25	1.751924	GACTAGCCACCACAGAGTAGG	59.248	57.143	0.00	0.00	0.00	3.18
25	26	1.358103	ACTAGCCACCACAGAGTAGGA	59.642	52.381	0.00	0.00	0.00	2.94
26	27	2.028130	CTAGCCACCACAGAGTAGGAG	58.972	57.143	0.00	0.00	0.00	3.69
27	28	0.616111	AGCCACCACAGAGTAGGAGG	60.616	60.000	0.00	0.00	38.51	4.30
28	29	1.617947	GCCACCACAGAGTAGGAGGG	61.618	65.000	0.00	0.00	36.31	4.30
29	30	0.041238	CCACCACAGAGTAGGAGGGA	59.959	60.000	0.00	0.00	32.67	4.20
30	31	1.552486	CCACCACAGAGTAGGAGGGAA	60.552	57.143	0.00	0.00	32.67	3.97
31	32	2.257207	CACCACAGAGTAGGAGGGAAA	58.743	52.381	0.00	0.00	0.00	3.13
32	33	2.637872	CACCACAGAGTAGGAGGGAAAA	59.362	50.000	0.00	0.00	0.00	2.29
33	34	2.907042	ACCACAGAGTAGGAGGGAAAAG	59.093	50.000	0.00	0.00	0.00	2.27
34	35	3.173965	CCACAGAGTAGGAGGGAAAAGA	58.826	50.000	0.00	0.00	0.00	2.52
35	36	3.196685	CCACAGAGTAGGAGGGAAAAGAG	59.803	52.174	0.00	0.00	0.00	2.85
36	37	3.196685	CACAGAGTAGGAGGGAAAAGAGG	59.803	52.174	0.00	0.00	0.00	3.69
37	38	3.077695	ACAGAGTAGGAGGGAAAAGAGGA	59.922	47.826	0.00	0.00	0.00	3.71
38	39	3.449377	CAGAGTAGGAGGGAAAAGAGGAC	59.551	52.174	0.00	0.00	0.00	3.85
39	40	3.077695	AGAGTAGGAGGGAAAAGAGGACA	59.922	47.826	0.00	0.00	0.00	4.02
40	41	3.174779	AGTAGGAGGGAAAAGAGGACAC	58.825	50.000	0.00	0.00	0.00	3.67
41	42	1.363246	AGGAGGGAAAAGAGGACACC	58.637	55.000	0.00	0.00	0.00	4.16
42	43	1.064825	GGAGGGAAAAGAGGACACCA	58.935	55.000	0.00	0.00	0.00	4.17
43	44	1.003696	GGAGGGAAAAGAGGACACCAG	59.996	57.143	0.00	0.00	0.00	4.00
44	45	1.978580	GAGGGAAAAGAGGACACCAGA	59.021	52.381	0.00	0.00	0.00	3.86
45	46	2.573915	GAGGGAAAAGAGGACACCAGAT	59.426	50.000	0.00	0.00	0.00	2.90
46	47	2.573915	AGGGAAAAGAGGACACCAGATC	59.426	50.000	0.00	0.00	0.00	2.75
47	48	2.356227	GGGAAAAGAGGACACCAGATCC	60.356	54.545	0.00	0.00	36.38	3.36
48	49	2.622436	GAAAAGAGGACACCAGATCCG	58.378	52.381	0.00	0.00	41.52	4.18
49	50	0.905357	AAAGAGGACACCAGATCCGG	59.095	55.000	0.00	0.00	41.52	5.14
50	51	0.041238	AAGAGGACACCAGATCCGGA	59.959	55.000	6.61	6.61	41.52	5.14
51	52	0.263172	AGAGGACACCAGATCCGGAT	59.737	55.000	19.21	19.21	41.52	4.18
52	53	1.123928	GAGGACACCAGATCCGGATT	58.876	55.000	20.22	5.84	41.52	3.01
53	54	1.069358	GAGGACACCAGATCCGGATTC	59.931	57.143	20.22	10.75	41.52	2.52
54	55	0.830648	GGACACCAGATCCGGATTCA	59.169	55.000	20.22	0.00	0.00	2.57
55	56	1.209504	GGACACCAGATCCGGATTCAA	59.790	52.381	20.22	0.00	0.00	2.69
56	57	2.158755	GGACACCAGATCCGGATTCAAT	60.159	50.000	20.22	2.18	0.00	2.57
57	58	3.134458	GACACCAGATCCGGATTCAATC	58.866	50.000	20.22	6.09	0.00	2.67
58	59	2.158755	ACACCAGATCCGGATTCAATCC	60.159	50.000	20.22	6.32	46.22	3.01
69	70	3.560105	GGATTCAATCCTTCCCAAGAGG	58.440	50.000	9.43	0.00	46.19	3.69
70	71	2.514458	TTCAATCCTTCCCAAGAGGC	57.486	50.000	0.00	0.00	34.17	4.70
71	72	1.371467	TCAATCCTTCCCAAGAGGCA	58.629	50.000	0.00	0.00	34.17	4.75
72	73	1.925255	TCAATCCTTCCCAAGAGGCAT	59.075	47.619	0.00	0.00	34.17	4.40
73	74	2.092212	TCAATCCTTCCCAAGAGGCATC	60.092	50.000	0.00	0.00	34.17	3.91
74	75	1.600058	ATCCTTCCCAAGAGGCATCA	58.400	50.000	0.00	0.00	34.17	3.07
75	76	0.620556	TCCTTCCCAAGAGGCATCAC	59.379	55.000	0.00	0.00	34.17	3.06
76	77	0.394899	CCTTCCCAAGAGGCATCACC	60.395	60.000	0.00	0.00	39.61	4.02
86	87	3.650647	GGCATCACCTCCACAAGAA	57.349	52.632	0.00	0.00	34.51	2.52
87	88	1.168714	GGCATCACCTCCACAAGAAC	58.831	55.000	0.00	0.00	34.51	3.01
88	89	1.271597	GGCATCACCTCCACAAGAACT	60.272	52.381	0.00	0.00	34.51	3.01
89	90	2.079925	GCATCACCTCCACAAGAACTC	58.920	52.381	0.00	0.00	0.00	3.01
90	91	2.704572	CATCACCTCCACAAGAACTCC	58.295	52.381	0.00	0.00	0.00	3.85
91	92	2.103153	TCACCTCCACAAGAACTCCT	57.897	50.000	0.00	0.00	0.00	3.69
92	93	1.971357	TCACCTCCACAAGAACTCCTC	59.029	52.381	0.00	0.00	0.00	3.71
93	94	1.002544	CACCTCCACAAGAACTCCTCC	59.997	57.143	0.00	0.00	0.00	4.30
94	95	0.615850	CCTCCACAAGAACTCCTCCC	59.384	60.000	0.00	0.00	0.00	4.30
95	96	0.615850	CTCCACAAGAACTCCTCCCC	59.384	60.000	0.00	0.00	0.00	4.81
96	97	0.193574	TCCACAAGAACTCCTCCCCT	59.806	55.000	0.00	0.00	0.00	4.79
97	98	0.615850	CCACAAGAACTCCTCCCCTC	59.384	60.000	0.00	0.00	0.00	4.30
98	99	0.247736	CACAAGAACTCCTCCCCTCG	59.752	60.000	0.00	0.00	0.00	4.63
99	100	1.219393	CAAGAACTCCTCCCCTCGC	59.781	63.158	0.00	0.00	0.00	5.03
100	101	2.352032	AAGAACTCCTCCCCTCGCG	61.352	63.158	0.00	0.00	0.00	5.87
101	102	2.754658	GAACTCCTCCCCTCGCGA	60.755	66.667	9.26	9.26	0.00	5.87
102	103	2.756283	AACTCCTCCCCTCGCGAG	60.756	66.667	29.06	29.06	0.00	5.03
111	112	2.262915	CCTCGCGAGGCAGTTCTT	59.737	61.111	39.83	0.00	42.44	2.52
112	113	1.807573	CCTCGCGAGGCAGTTCTTC	60.808	63.158	39.83	0.00	42.44	2.87
113	114	1.807573	CTCGCGAGGCAGTTCTTCC	60.808	63.158	28.40	0.00	0.00	3.46
114	115	2.219325	CTCGCGAGGCAGTTCTTCCT	62.219	60.000	28.40	0.00	34.90	3.36
115	116	1.374758	CGCGAGGCAGTTCTTCCTT	60.375	57.895	0.00	0.00	31.71	3.36
116	117	0.951040	CGCGAGGCAGTTCTTCCTTT	60.951	55.000	0.00	0.00	31.71	3.11
117	118	0.519077	GCGAGGCAGTTCTTCCTTTG	59.481	55.000	0.00	0.00	31.71	2.77
118	119	1.884235	CGAGGCAGTTCTTCCTTTGT	58.116	50.000	0.00	0.00	31.71	2.83
119	120	2.870435	GCGAGGCAGTTCTTCCTTTGTA	60.870	50.000	0.00	0.00	31.71	2.41
120	121	3.600388	CGAGGCAGTTCTTCCTTTGTAT	58.400	45.455	0.00	0.00	31.71	2.29
121	122	4.003648	CGAGGCAGTTCTTCCTTTGTATT	58.996	43.478	0.00	0.00	31.71	1.89
122	123	4.142816	CGAGGCAGTTCTTCCTTTGTATTG	60.143	45.833	0.00	0.00	31.71	1.90
123	124	4.729868	AGGCAGTTCTTCCTTTGTATTGT	58.270	39.130	0.00	0.00	0.00	2.71
124	125	5.140454	AGGCAGTTCTTCCTTTGTATTGTT	58.860	37.500	0.00	0.00	0.00	2.83
125	126	5.241728	AGGCAGTTCTTCCTTTGTATTGTTC	59.758	40.000	0.00	0.00	0.00	3.18
126	127	5.009610	GGCAGTTCTTCCTTTGTATTGTTCA	59.990	40.000	0.00	0.00	0.00	3.18
127	128	6.294731	GGCAGTTCTTCCTTTGTATTGTTCAT	60.295	38.462	0.00	0.00	0.00	2.57
128	129	6.803807	GCAGTTCTTCCTTTGTATTGTTCATC	59.196	38.462	0.00	0.00	0.00	2.92
129	130	7.522073	GCAGTTCTTCCTTTGTATTGTTCATCA	60.522	37.037	0.00	0.00	0.00	3.07
130	131	7.805071	CAGTTCTTCCTTTGTATTGTTCATCAC	59.195	37.037	0.00	0.00	0.00	3.06
131	132	6.817765	TCTTCCTTTGTATTGTTCATCACC	57.182	37.500	0.00	0.00	0.00	4.02
132	133	6.303054	TCTTCCTTTGTATTGTTCATCACCA	58.697	36.000	0.00	0.00	0.00	4.17
133	134	6.430925	TCTTCCTTTGTATTGTTCATCACCAG	59.569	38.462	0.00	0.00	0.00	4.00
134	135	4.458989	TCCTTTGTATTGTTCATCACCAGC	59.541	41.667	0.00	0.00	0.00	4.85
135	136	4.380867	CCTTTGTATTGTTCATCACCAGCC	60.381	45.833	0.00	0.00	0.00	4.85
136	137	2.722094	TGTATTGTTCATCACCAGCCC	58.278	47.619	0.00	0.00	0.00	5.19
137	138	2.024414	GTATTGTTCATCACCAGCCCC	58.976	52.381	0.00	0.00	0.00	5.80
138	139	0.706433	ATTGTTCATCACCAGCCCCT	59.294	50.000	0.00	0.00	0.00	4.79
139	140	0.251297	TTGTTCATCACCAGCCCCTG	60.251	55.000	0.00	0.00	0.00	4.45
140	141	1.133181	TGTTCATCACCAGCCCCTGA	61.133	55.000	0.00	0.00	32.44	3.86
141	142	0.393537	GTTCATCACCAGCCCCTGAG	60.394	60.000	0.00	0.00	32.44	3.35
142	143	1.565390	TTCATCACCAGCCCCTGAGG	61.565	60.000	0.00	0.00	39.47	3.86
151	152	2.276740	CCCCTGAGGCAATCCACC	59.723	66.667	0.00	0.00	33.74	4.61
152	153	2.615465	CCCCTGAGGCAATCCACCA	61.615	63.158	0.00	0.00	33.74	4.17
153	154	1.379044	CCCTGAGGCAATCCACCAC	60.379	63.158	0.00	0.00	33.74	4.16
154	155	1.379916	CCTGAGGCAATCCACCACA	59.620	57.895	0.00	0.00	33.74	4.17
155	156	0.962356	CCTGAGGCAATCCACCACAC	60.962	60.000	0.00	0.00	33.74	3.82
156	157	0.962356	CTGAGGCAATCCACCACACC	60.962	60.000	0.00	0.00	33.74	4.16
157	158	1.074775	GAGGCAATCCACCACACCA	59.925	57.895	0.00	0.00	33.74	4.17
158	159	1.228552	AGGCAATCCACCACACCAC	60.229	57.895	0.00	0.00	33.74	4.16
159	160	1.530419	GGCAATCCACCACACCACA	60.530	57.895	0.00	0.00	0.00	4.17
160	161	1.112315	GGCAATCCACCACACCACAA	61.112	55.000	0.00	0.00	0.00	3.33
161	162	0.749649	GCAATCCACCACACCACAAA	59.250	50.000	0.00	0.00	0.00	2.83
162	163	1.537990	GCAATCCACCACACCACAAAC	60.538	52.381	0.00	0.00	0.00	2.93
163	164	2.031120	CAATCCACCACACCACAAACT	58.969	47.619	0.00	0.00	0.00	2.66
164	165	3.218453	CAATCCACCACACCACAAACTA	58.782	45.455	0.00	0.00	0.00	2.24
165	166	2.631160	TCCACCACACCACAAACTAG	57.369	50.000	0.00	0.00	0.00	2.57
166	167	2.120312	TCCACCACACCACAAACTAGA	58.880	47.619	0.00	0.00	0.00	2.43
167	168	2.104111	TCCACCACACCACAAACTAGAG	59.896	50.000	0.00	0.00	0.00	2.43
168	169	2.158813	CCACCACACCACAAACTAGAGT	60.159	50.000	0.00	0.00	0.00	3.24
169	170	3.070446	CCACCACACCACAAACTAGAGTA	59.930	47.826	0.00	0.00	0.00	2.59
170	171	4.307432	CACCACACCACAAACTAGAGTAG	58.693	47.826	0.00	0.00	0.00	2.57
171	172	3.323979	ACCACACCACAAACTAGAGTAGG	59.676	47.826	0.00	0.00	0.00	3.18
172	173	3.306780	CCACACCACAAACTAGAGTAGGG	60.307	52.174	0.00	0.00	0.00	3.53
173	174	3.323979	CACACCACAAACTAGAGTAGGGT	59.676	47.826	0.00	0.00	0.00	4.34
174	175	4.525487	CACACCACAAACTAGAGTAGGGTA	59.475	45.833	0.00	0.00	0.00	3.69
175	176	5.187186	CACACCACAAACTAGAGTAGGGTAT	59.813	44.000	0.00	0.00	0.00	2.73
176	177	5.783875	ACACCACAAACTAGAGTAGGGTATT	59.216	40.000	0.00	0.00	0.00	1.89
177	178	6.955851	ACACCACAAACTAGAGTAGGGTATTA	59.044	38.462	0.00	0.00	0.00	0.98
178	179	7.093596	ACACCACAAACTAGAGTAGGGTATTAC	60.094	40.741	0.00	0.00	0.00	1.89
179	180	6.955851	ACCACAAACTAGAGTAGGGTATTACA	59.044	38.462	0.00	0.00	0.00	2.41
180	181	7.093596	ACCACAAACTAGAGTAGGGTATTACAC	60.094	40.741	0.00	0.00	0.00	2.90
198	199	2.961768	CACAATGGTGGCCCGAAC	59.038	61.111	0.00	0.00	41.45	3.95
199	200	1.603455	CACAATGGTGGCCCGAACT	60.603	57.895	0.00	0.00	41.45	3.01
200	201	0.322098	CACAATGGTGGCCCGAACTA	60.322	55.000	0.00	0.00	41.45	2.24
201	202	0.035439	ACAATGGTGGCCCGAACTAG	60.035	55.000	0.00	0.00	0.00	2.57
202	203	0.035439	CAATGGTGGCCCGAACTAGT	60.035	55.000	0.00	0.00	0.00	2.57
203	204	1.208535	CAATGGTGGCCCGAACTAGTA	59.791	52.381	0.00	0.00	0.00	1.82
204	205	1.802553	ATGGTGGCCCGAACTAGTAT	58.197	50.000	0.00	0.00	0.00	2.12
205	206	2.457813	TGGTGGCCCGAACTAGTATA	57.542	50.000	0.00	0.00	0.00	1.47
206	207	2.749600	TGGTGGCCCGAACTAGTATAA	58.250	47.619	0.00	0.00	0.00	0.98
207	208	3.106054	TGGTGGCCCGAACTAGTATAAA	58.894	45.455	0.00	0.00	0.00	1.40
208	209	3.118665	TGGTGGCCCGAACTAGTATAAAC	60.119	47.826	0.00	0.00	0.00	2.01
209	210	3.461061	GTGGCCCGAACTAGTATAAACC	58.539	50.000	0.00	0.00	0.00	3.27
210	211	3.133542	GTGGCCCGAACTAGTATAAACCT	59.866	47.826	0.00	0.00	0.00	3.50
211	212	3.385755	TGGCCCGAACTAGTATAAACCTC	59.614	47.826	0.00	0.00	0.00	3.85
212	213	3.551659	GGCCCGAACTAGTATAAACCTCG	60.552	52.174	0.00	0.00	0.00	4.63
213	214	3.067320	GCCCGAACTAGTATAAACCTCGT	59.933	47.826	9.34	0.00	0.00	4.18
214	215	4.604976	CCCGAACTAGTATAAACCTCGTG	58.395	47.826	9.34	0.00	0.00	4.35
215	216	4.096984	CCCGAACTAGTATAAACCTCGTGT	59.903	45.833	9.34	0.00	0.00	4.49
216	217	5.269313	CCGAACTAGTATAAACCTCGTGTC	58.731	45.833	9.34	0.00	0.00	3.67
217	218	5.269313	CGAACTAGTATAAACCTCGTGTCC	58.731	45.833	0.00	0.00	0.00	4.02
218	219	5.586339	GAACTAGTATAAACCTCGTGTCCC	58.414	45.833	0.00	0.00	0.00	4.46
219	220	4.864726	ACTAGTATAAACCTCGTGTCCCT	58.135	43.478	0.00	0.00	0.00	4.20
220	221	5.267587	ACTAGTATAAACCTCGTGTCCCTT	58.732	41.667	0.00	0.00	0.00	3.95
221	222	4.467198	AGTATAAACCTCGTGTCCCTTG	57.533	45.455	0.00	0.00	0.00	3.61
222	223	3.836562	AGTATAAACCTCGTGTCCCTTGT	59.163	43.478	0.00	0.00	0.00	3.16
223	224	2.536761	TAAACCTCGTGTCCCTTGTG	57.463	50.000	0.00	0.00	0.00	3.33
224	225	0.544697	AAACCTCGTGTCCCTTGTGT	59.455	50.000	0.00	0.00	0.00	3.72
225	226	0.544697	AACCTCGTGTCCCTTGTGTT	59.455	50.000	0.00	0.00	0.00	3.32
226	227	0.179056	ACCTCGTGTCCCTTGTGTTG	60.179	55.000	0.00	0.00	0.00	3.33
227	228	0.179056	CCTCGTGTCCCTTGTGTTGT	60.179	55.000	0.00	0.00	0.00	3.32
228	229	1.663695	CTCGTGTCCCTTGTGTTGTT	58.336	50.000	0.00	0.00	0.00	2.83
229	230	1.597663	CTCGTGTCCCTTGTGTTGTTC	59.402	52.381	0.00	0.00	0.00	3.18
230	231	1.208535	TCGTGTCCCTTGTGTTGTTCT	59.791	47.619	0.00	0.00	0.00	3.01
231	232	2.014128	CGTGTCCCTTGTGTTGTTCTT	58.986	47.619	0.00	0.00	0.00	2.52
232	233	2.031683	CGTGTCCCTTGTGTTGTTCTTC	59.968	50.000	0.00	0.00	0.00	2.87
233	234	2.031683	GTGTCCCTTGTGTTGTTCTTCG	59.968	50.000	0.00	0.00	0.00	3.79
234	235	2.285977	GTCCCTTGTGTTGTTCTTCGT	58.714	47.619	0.00	0.00	0.00	3.85
235	236	2.031683	GTCCCTTGTGTTGTTCTTCGTG	59.968	50.000	0.00	0.00	0.00	4.35
236	237	2.014128	CCCTTGTGTTGTTCTTCGTGT	58.986	47.619	0.00	0.00	0.00	4.49
237	238	3.118702	TCCCTTGTGTTGTTCTTCGTGTA	60.119	43.478	0.00	0.00	0.00	2.90
238	239	3.247648	CCCTTGTGTTGTTCTTCGTGTAG	59.752	47.826	0.00	0.00	0.00	2.74
239	240	3.869246	CCTTGTGTTGTTCTTCGTGTAGT	59.131	43.478	0.00	0.00	0.00	2.73
240	241	4.331717	CCTTGTGTTGTTCTTCGTGTAGTT	59.668	41.667	0.00	0.00	0.00	2.24
241	242	5.163794	CCTTGTGTTGTTCTTCGTGTAGTTT	60.164	40.000	0.00	0.00	0.00	2.66
242	243	6.036300	CCTTGTGTTGTTCTTCGTGTAGTTTA	59.964	38.462	0.00	0.00	0.00	2.01
243	244	6.578020	TGTGTTGTTCTTCGTGTAGTTTAG	57.422	37.500	0.00	0.00	0.00	1.85
244	245	6.331845	TGTGTTGTTCTTCGTGTAGTTTAGA	58.668	36.000	0.00	0.00	0.00	2.10
245	246	6.982141	TGTGTTGTTCTTCGTGTAGTTTAGAT	59.018	34.615	0.00	0.00	0.00	1.98
246	247	7.168637	TGTGTTGTTCTTCGTGTAGTTTAGATC	59.831	37.037	0.00	0.00	0.00	2.75
247	248	6.643770	TGTTGTTCTTCGTGTAGTTTAGATCC	59.356	38.462	0.00	0.00	0.00	3.36
248	249	6.585695	TGTTCTTCGTGTAGTTTAGATCCT	57.414	37.500	0.00	0.00	0.00	3.24
249	250	6.989659	TGTTCTTCGTGTAGTTTAGATCCTT	58.010	36.000	0.00	0.00	0.00	3.36
250	251	6.866770	TGTTCTTCGTGTAGTTTAGATCCTTG	59.133	38.462	0.00	0.00	0.00	3.61
251	252	5.408356	TCTTCGTGTAGTTTAGATCCTTGC	58.592	41.667	0.00	0.00	0.00	4.01
252	253	3.766151	TCGTGTAGTTTAGATCCTTGCG	58.234	45.455	0.00	0.00	0.00	4.85
253	254	3.441222	TCGTGTAGTTTAGATCCTTGCGA	59.559	43.478	0.00	0.00	0.00	5.10
254	255	3.791887	CGTGTAGTTTAGATCCTTGCGAG	59.208	47.826	0.00	0.00	0.00	5.03
255	256	4.113354	GTGTAGTTTAGATCCTTGCGAGG	58.887	47.826	14.59	14.59	45.02	4.63
256	257	2.317530	AGTTTAGATCCTTGCGAGGC	57.682	50.000	16.01	2.01	43.21	4.70
257	258	0.931005	GTTTAGATCCTTGCGAGGCG	59.069	55.000	16.01	0.00	43.21	5.52
258	259	0.821517	TTTAGATCCTTGCGAGGCGA	59.178	50.000	16.01	0.00	43.21	5.54
259	260	0.102481	TTAGATCCTTGCGAGGCGAC	59.898	55.000	16.01	8.73	43.21	5.19
260	261	2.060004	TAGATCCTTGCGAGGCGACG	62.060	60.000	16.01	0.00	43.21	5.12
261	262	3.411418	GATCCTTGCGAGGCGACGA	62.411	63.158	16.01	0.00	43.21	4.20
262	263	3.417275	ATCCTTGCGAGGCGACGAG	62.417	63.158	16.01	0.00	43.21	4.18
263	264	4.116328	CCTTGCGAGGCGACGAGA	62.116	66.667	7.18	0.00	35.94	4.04
264	265	2.876645	CTTGCGAGGCGACGAGAC	60.877	66.667	0.00	0.00	35.09	3.36
265	266	3.610791	CTTGCGAGGCGACGAGACA	62.611	63.158	0.00	0.00	35.09	3.41
266	267	2.874010	CTTGCGAGGCGACGAGACAT	62.874	60.000	0.00	0.00	35.09	3.06
267	268	1.650314	TTGCGAGGCGACGAGACATA	61.650	55.000	0.00	0.00	35.09	2.29
268	269	1.369448	GCGAGGCGACGAGACATAG	60.369	63.158	0.00	0.00	35.09	2.23
269	270	1.280142	CGAGGCGACGAGACATAGG	59.720	63.158	0.00	0.00	35.09	2.57
270	271	1.437772	CGAGGCGACGAGACATAGGT	61.438	60.000	0.00	0.00	35.09	3.08
271	272	1.590932	GAGGCGACGAGACATAGGTA	58.409	55.000	0.00	0.00	0.00	3.08
272	273	1.945394	GAGGCGACGAGACATAGGTAA	59.055	52.381	0.00	0.00	0.00	2.85
273	274	1.948145	AGGCGACGAGACATAGGTAAG	59.052	52.381	0.00	0.00	0.00	2.34
274	275	1.674962	GGCGACGAGACATAGGTAAGT	59.325	52.381	0.00	0.00	0.00	2.24
275	276	2.874701	GGCGACGAGACATAGGTAAGTA	59.125	50.000	0.00	0.00	0.00	2.24
276	277	3.059051	GGCGACGAGACATAGGTAAGTAG	60.059	52.174	0.00	0.00	0.00	2.57
277	278	3.059051	GCGACGAGACATAGGTAAGTAGG	60.059	52.174	0.00	0.00	0.00	3.18
278	279	4.375272	CGACGAGACATAGGTAAGTAGGA	58.625	47.826	0.00	0.00	0.00	2.94
279	280	4.448395	CGACGAGACATAGGTAAGTAGGAG	59.552	50.000	0.00	0.00	0.00	3.69
280	281	4.716794	ACGAGACATAGGTAAGTAGGAGG	58.283	47.826	0.00	0.00	0.00	4.30
281	282	4.165758	ACGAGACATAGGTAAGTAGGAGGT	59.834	45.833	0.00	0.00	0.00	3.85
282	283	4.515944	CGAGACATAGGTAAGTAGGAGGTG	59.484	50.000	0.00	0.00	0.00	4.00
283	284	5.447757	GAGACATAGGTAAGTAGGAGGTGT	58.552	45.833	0.00	0.00	0.00	4.16
284	285	5.202004	AGACATAGGTAAGTAGGAGGTGTG	58.798	45.833	0.00	0.00	0.00	3.82
285	286	5.044328	AGACATAGGTAAGTAGGAGGTGTGA	60.044	44.000	0.00	0.00	0.00	3.58
286	287	5.778542	ACATAGGTAAGTAGGAGGTGTGAT	58.221	41.667	0.00	0.00	0.00	3.06
287	288	5.834204	ACATAGGTAAGTAGGAGGTGTGATC	59.166	44.000	0.00	0.00	0.00	2.92
288	289	4.611564	AGGTAAGTAGGAGGTGTGATCT	57.388	45.455	0.00	0.00	0.00	2.75
289	290	4.538738	AGGTAAGTAGGAGGTGTGATCTC	58.461	47.826	0.00	0.00	0.00	2.75
293	294	2.105128	GGAGGTGTGATCTCCGCG	59.895	66.667	0.00	0.00	41.01	6.46
294	295	2.583593	GAGGTGTGATCTCCGCGC	60.584	66.667	0.00	0.00	35.16	6.86
295	296	4.498520	AGGTGTGATCTCCGCGCG	62.499	66.667	25.67	25.67	36.68	6.86
296	297	4.796231	GGTGTGATCTCCGCGCGT	62.796	66.667	29.95	10.26	36.68	6.01
297	298	2.101575	GTGTGATCTCCGCGCGTA	59.898	61.111	29.95	13.14	0.00	4.42
298	299	2.101575	TGTGATCTCCGCGCGTAC	59.898	61.111	29.95	16.60	0.00	3.67
299	300	2.654404	GTGATCTCCGCGCGTACC	60.654	66.667	29.95	13.00	0.00	3.34
300	301	3.896133	TGATCTCCGCGCGTACCC	61.896	66.667	29.95	13.73	0.00	3.69
301	302	4.642542	GATCTCCGCGCGTACCCC	62.643	72.222	29.95	10.96	0.00	4.95
307	308	4.430765	CGCGCGTACCCCAGAGTT	62.431	66.667	24.19	0.00	0.00	3.01
308	309	2.508663	GCGCGTACCCCAGAGTTC	60.509	66.667	8.43	0.00	0.00	3.01
309	310	2.202570	CGCGTACCCCAGAGTTCG	60.203	66.667	0.00	0.00	34.14	3.95
310	311	2.693762	CGCGTACCCCAGAGTTCGA	61.694	63.158	0.00	0.00	32.95	3.71
311	312	1.588082	GCGTACCCCAGAGTTCGAA	59.412	57.895	0.00	0.00	32.95	3.71
312	313	0.735287	GCGTACCCCAGAGTTCGAAC	60.735	60.000	20.71	20.71	32.95	3.95
313	314	0.108945	CGTACCCCAGAGTTCGAACC	60.109	60.000	24.22	15.46	32.95	3.62
314	315	1.264295	GTACCCCAGAGTTCGAACCT	58.736	55.000	24.22	17.39	0.00	3.50
315	316	1.622312	GTACCCCAGAGTTCGAACCTT	59.378	52.381	24.22	10.36	0.00	3.50
316	317	0.396811	ACCCCAGAGTTCGAACCTTG	59.603	55.000	24.22	20.61	0.00	3.61
317	318	0.685097	CCCCAGAGTTCGAACCTTGA	59.315	55.000	24.22	0.00	0.00	3.02
318	319	1.338200	CCCCAGAGTTCGAACCTTGAG	60.338	57.143	24.22	13.32	0.00	3.02
319	320	1.338200	CCCAGAGTTCGAACCTTGAGG	60.338	57.143	24.22	18.88	42.17	3.86
320	321	1.338200	CCAGAGTTCGAACCTTGAGGG	60.338	57.143	24.22	13.39	40.27	4.30
329	330	3.003173	CCTTGAGGGTCTGCCGGA	61.003	66.667	5.05	0.00	34.97	5.14
330	331	2.592993	CCTTGAGGGTCTGCCGGAA	61.593	63.158	5.05	0.00	34.97	4.30
331	332	1.376037	CTTGAGGGTCTGCCGGAAC	60.376	63.158	5.05	0.00	34.97	3.62
367	368	1.454479	CCACATCCAGCACCATCCC	60.454	63.158	0.00	0.00	0.00	3.85
368	369	1.303948	CACATCCAGCACCATCCCA	59.696	57.895	0.00	0.00	0.00	4.37
369	370	1.033746	CACATCCAGCACCATCCCAC	61.034	60.000	0.00	0.00	0.00	4.61
370	371	1.303948	CATCCAGCACCATCCCACA	59.696	57.895	0.00	0.00	0.00	4.17
371	372	1.033746	CATCCAGCACCATCCCACAC	61.034	60.000	0.00	0.00	0.00	3.82
381	382	1.270839	CCATCCCACACGACAAACTCT	60.271	52.381	0.00	0.00	0.00	3.24
401	402	2.428890	CTGACGAGAAAGAGTAGGGCAT	59.571	50.000	0.00	0.00	0.00	4.40
402	403	3.628008	TGACGAGAAAGAGTAGGGCATA	58.372	45.455	0.00	0.00	0.00	3.14
403	404	4.215908	TGACGAGAAAGAGTAGGGCATAT	58.784	43.478	0.00	0.00	0.00	1.78
404	405	4.038042	TGACGAGAAAGAGTAGGGCATATG	59.962	45.833	0.00	0.00	0.00	1.78
405	406	3.961408	ACGAGAAAGAGTAGGGCATATGT	59.039	43.478	4.29	0.00	0.00	2.29
418	419	0.308684	CATATGTGACGTGGGCATGC	59.691	55.000	9.90	9.90	0.00	4.06
432	433	1.755395	CATGCCTGGTGTCCCATGG	60.755	63.158	4.14	4.14	40.90	3.66
494	495	7.191551	CACAACCGACGAAGATTTAGACTATA	58.808	38.462	0.00	0.00	0.00	1.31
535	538	8.760569	CCGCTTTTGTTTAGTTGAAATATGTTT	58.239	29.630	0.00	0.00	0.00	2.83
573	576	8.661352	ACTTGGTCTGGTTTAAATGAAAATTG	57.339	30.769	0.00	0.00	0.00	2.32
580	583	9.434420	TCTGGTTTAAATGAAAATTGCCTAATG	57.566	29.630	0.00	0.00	0.00	1.90
593	596	6.671614	ATTGCCTAATGTGCATGAAATTTG	57.328	33.333	0.00	0.00	38.76	2.32
599	602	0.246086	GTGCATGAAATTTGCCCGGA	59.754	50.000	0.73	0.00	39.39	5.14
602	605	2.762887	TGCATGAAATTTGCCCGGATTA	59.237	40.909	0.73	0.00	39.39	1.75
606	609	5.599732	CATGAAATTTGCCCGGATTATTCA	58.400	37.500	0.73	6.42	0.00	2.57
661	664	1.749258	GGGGTTGAATGTCCGGCTC	60.749	63.158	0.00	0.00	0.00	4.70
675	678	1.602771	GGCTCCCCTAACACTGTCC	59.397	63.158	0.00	0.00	0.00	4.02
681	685	1.515954	CCTAACACTGTCCGCGGAT	59.484	57.895	33.58	17.08	0.00	4.18
693	697	3.204827	GCGGATGCTTGTGCGGAT	61.205	61.111	1.34	0.00	43.34	4.18
699	703	3.664107	GGATGCTTGTGCGGATAGATAA	58.336	45.455	0.00	0.00	43.34	1.75
713	717	7.703298	CGGATAGATAATGTGTCCGTTTTAA	57.297	36.000	8.69	0.00	44.94	1.52
724	728	0.664224	CCGTTTTAAGGGTGTGCGTT	59.336	50.000	0.00	0.00	0.00	4.84
738	742	1.153086	GCGTTGGAGATGCCCTGAT	60.153	57.895	0.00	0.00	34.03	2.90
754	758	6.363882	TGCCCTGATATGTGACAAATAATCA	58.636	36.000	0.00	0.00	0.00	2.57
755	759	6.832900	TGCCCTGATATGTGACAAATAATCAA	59.167	34.615	0.00	0.00	0.00	2.57
756	760	7.341512	TGCCCTGATATGTGACAAATAATCAAA	59.658	33.333	0.00	0.00	0.00	2.69
820	824	4.457281	CCATGGGGCAAATGGTCA	57.543	55.556	2.85	0.00	39.87	4.02
836	969	1.341383	GGTCAAATGCCCTCATGACCT	60.341	52.381	14.78	0.00	40.20	3.85
875	1008	1.002366	GCAGCATCTACACAACTCCG	58.998	55.000	0.00	0.00	0.00	4.63
932	1190	2.752238	CTCCGGCGACTCCTGTCT	60.752	66.667	9.30	0.00	40.86	3.41
1112	1377	4.082523	GCTAGCGGGACACCAGCA	62.083	66.667	14.31	1.53	38.29	4.41
1380	1645	1.467678	CCGCCCCTCTCAATCTCGAT	61.468	60.000	0.00	0.00	0.00	3.59
1747	2012	0.109086	CCGCATCACAGAGTTCTCGT	60.109	55.000	0.00	0.00	0.00	4.18
1846	2111	2.743183	CGGATCAACTCCCTTAGCCTTG	60.743	54.545	0.00	0.00	41.49	3.61
1854	2119	3.118223	ACTCCCTTAGCCTTGTAAGCATC	60.118	47.826	0.00	0.00	0.00	3.91
1914	2179	4.561105	GGGAACTCATCATCGAGAATACC	58.439	47.826	0.00	0.00	36.47	2.73
2077	2342	3.833650	TGGTGGGTTTCGTAACTCAGATA	59.166	43.478	7.83	0.00	45.14	1.98
2162	2427	0.867746	ATTGCAGTGCTGTGTGTACG	59.132	50.000	17.60	0.00	36.37	3.67
2261	2526	4.539083	TGACAACGGCAGTGCGGT	62.539	61.111	21.42	21.42	43.64	5.68
2372	2637	8.105829	AGATGTACATTCAGGTGAAGATTCTTT	58.894	33.333	10.30	0.00	37.48	2.52
2499	2764	4.403734	GGTCAGAAGGGGAAAACAATGTA	58.596	43.478	0.00	0.00	0.00	2.29
2538	2803	5.344128	CCGCAATTTCATCAGAAGTTTTGAG	59.656	40.000	2.27	0.00	32.13	3.02
2541	2806	7.327761	CGCAATTTCATCAGAAGTTTTGAGATT	59.672	33.333	2.27	0.00	32.13	2.40
2610	2875	6.785191	TGAAGTTGACTTTGTCACATTCTTC	58.215	36.000	17.35	17.13	42.60	2.87
2808	3073	3.906998	TGTGCGTGATTTGGGTTTAATG	58.093	40.909	0.00	0.00	0.00	1.90
2811	3076	3.057174	TGCGTGATTTGGGTTTAATGGAC	60.057	43.478	0.00	0.00	0.00	4.02
2829	3094	1.745087	GACCCATTCGCATGTTGACAT	59.255	47.619	0.00	0.00	36.96	3.06
2965	3231	6.003326	TGCTCATTTTGATTCCAGTAGAACA	58.997	36.000	0.00	0.00	37.29	3.18
2966	3232	6.660521	TGCTCATTTTGATTCCAGTAGAACAT	59.339	34.615	0.00	0.00	37.29	2.71
2967	3233	7.148188	TGCTCATTTTGATTCCAGTAGAACATC	60.148	37.037	0.00	0.00	37.29	3.06
2968	3234	7.148188	GCTCATTTTGATTCCAGTAGAACATCA	60.148	37.037	0.00	0.00	37.29	3.07
2969	3235	8.044060	TCATTTTGATTCCAGTAGAACATCAC	57.956	34.615	0.00	0.00	37.29	3.06
2970	3236	7.884877	TCATTTTGATTCCAGTAGAACATCACT	59.115	33.333	0.00	0.00	37.29	3.41
2971	3237	9.166173	CATTTTGATTCCAGTAGAACATCACTA	57.834	33.333	0.00	0.00	37.29	2.74
2972	3238	8.777865	TTTTGATTCCAGTAGAACATCACTAG	57.222	34.615	0.00	0.00	37.29	2.57
2973	3239	6.471233	TGATTCCAGTAGAACATCACTAGG	57.529	41.667	0.00	0.00	37.29	3.02
2974	3240	5.958380	TGATTCCAGTAGAACATCACTAGGT	59.042	40.000	0.00	0.00	37.29	3.08
2975	3241	6.440647	TGATTCCAGTAGAACATCACTAGGTT	59.559	38.462	0.00	0.00	37.29	3.50
2976	3242	5.661056	TCCAGTAGAACATCACTAGGTTG	57.339	43.478	0.00	0.00	27.75	3.77
2977	3243	4.081642	TCCAGTAGAACATCACTAGGTTGC	60.082	45.833	0.00	0.00	27.75	4.17
2978	3244	3.859961	CAGTAGAACATCACTAGGTTGCG	59.140	47.826	0.00	0.00	27.75	4.85
2979	3245	3.510360	AGTAGAACATCACTAGGTTGCGT	59.490	43.478	0.00	0.00	27.75	5.24
2980	3246	4.703575	AGTAGAACATCACTAGGTTGCGTA	59.296	41.667	0.00	0.00	27.75	4.42
2981	3247	3.846360	AGAACATCACTAGGTTGCGTAC	58.154	45.455	0.00	0.00	27.75	3.67
2982	3248	3.510360	AGAACATCACTAGGTTGCGTACT	59.490	43.478	0.00	0.00	27.75	2.73
2983	3249	4.703575	AGAACATCACTAGGTTGCGTACTA	59.296	41.667	0.00	0.00	27.75	1.82
2984	3250	5.360144	AGAACATCACTAGGTTGCGTACTAT	59.640	40.000	0.00	0.00	27.75	2.12
2985	3251	6.544931	AGAACATCACTAGGTTGCGTACTATA	59.455	38.462	0.00	0.00	27.75	1.31
2986	3252	6.315091	ACATCACTAGGTTGCGTACTATAG	57.685	41.667	0.00	0.00	0.00	1.31
2987	3253	6.060136	ACATCACTAGGTTGCGTACTATAGA	58.940	40.000	6.78	0.00	0.00	1.98
2988	3254	6.544931	ACATCACTAGGTTGCGTACTATAGAA	59.455	38.462	6.78	0.00	0.00	2.10
2989	3255	7.067859	ACATCACTAGGTTGCGTACTATAGAAA	59.932	37.037	6.78	0.00	0.00	2.52
2990	3256	7.578310	TCACTAGGTTGCGTACTATAGAAAT	57.422	36.000	6.78	0.00	0.00	2.17
2991	3257	7.423199	TCACTAGGTTGCGTACTATAGAAATG	58.577	38.462	6.78	0.98	0.00	2.32
2992	3258	7.067859	TCACTAGGTTGCGTACTATAGAAATGT	59.932	37.037	6.78	0.00	0.00	2.71
2993	3259	8.347771	CACTAGGTTGCGTACTATAGAAATGTA	58.652	37.037	6.78	0.00	0.00	2.29
2994	3260	9.075678	ACTAGGTTGCGTACTATAGAAATGTAT	57.924	33.333	6.78	0.00	0.00	2.29
2995	3261	9.343103	CTAGGTTGCGTACTATAGAAATGTATG	57.657	37.037	6.78	0.00	0.00	2.39
2996	3262	7.152645	AGGTTGCGTACTATAGAAATGTATGG	58.847	38.462	6.78	0.00	0.00	2.74
2997	3263	7.014905	AGGTTGCGTACTATAGAAATGTATGGA	59.985	37.037	6.78	0.00	0.00	3.41
2998	3264	7.654520	GGTTGCGTACTATAGAAATGTATGGAA	59.345	37.037	6.78	0.00	33.41	3.53
2999	3265	9.037737	GTTGCGTACTATAGAAATGTATGGAAA	57.962	33.333	6.78	0.00	36.07	3.13
3000	3266	8.583810	TGCGTACTATAGAAATGTATGGAAAC	57.416	34.615	6.78	0.00	0.00	2.78
3015	3281	4.431416	TGGAAACAGCCTCTTACAGAAA	57.569	40.909	0.00	0.00	35.01	2.52
3016	3282	4.985538	TGGAAACAGCCTCTTACAGAAAT	58.014	39.130	0.00	0.00	35.01	2.17
3017	3283	4.761739	TGGAAACAGCCTCTTACAGAAATG	59.238	41.667	0.00	0.00	35.01	2.32
3018	3284	4.762251	GGAAACAGCCTCTTACAGAAATGT	59.238	41.667	0.00	0.00	0.00	2.71
3019	3285	5.938125	GGAAACAGCCTCTTACAGAAATGTA	59.062	40.000	0.00	0.00	0.00	2.29
3020	3286	6.092807	GGAAACAGCCTCTTACAGAAATGTAG	59.907	42.308	0.00	0.00	0.00	2.74
3021	3287	5.091261	ACAGCCTCTTACAGAAATGTAGG	57.909	43.478	0.00	0.00	0.00	3.18
3022	3288	4.080863	ACAGCCTCTTACAGAAATGTAGGG	60.081	45.833	0.00	0.66	0.00	3.53
3023	3289	4.162320	CAGCCTCTTACAGAAATGTAGGGA	59.838	45.833	0.00	0.00	0.00	4.20
3024	3290	4.783227	AGCCTCTTACAGAAATGTAGGGAA	59.217	41.667	0.00	0.00	0.00	3.97
3025	3291	5.250774	AGCCTCTTACAGAAATGTAGGGAAA	59.749	40.000	0.00	0.00	0.00	3.13
3026	3292	5.586643	GCCTCTTACAGAAATGTAGGGAAAG	59.413	44.000	0.00	0.00	0.00	2.62
3027	3293	6.116126	CCTCTTACAGAAATGTAGGGAAAGG	58.884	44.000	0.00	0.00	0.00	3.11
3028	3294	5.497474	TCTTACAGAAATGTAGGGAAAGGC	58.503	41.667	0.00	0.00	0.00	4.35
3029	3295	5.250774	TCTTACAGAAATGTAGGGAAAGGCT	59.749	40.000	0.00	0.00	0.00	4.58
3030	3296	3.690460	ACAGAAATGTAGGGAAAGGCTG	58.310	45.455	0.00	0.00	0.00	4.85
3031	3297	2.424956	CAGAAATGTAGGGAAAGGCTGC	59.575	50.000	0.00	0.00	0.00	5.25
3032	3298	1.401905	GAAATGTAGGGAAAGGCTGCG	59.598	52.381	0.00	0.00	0.00	5.18
3033	3299	0.328258	AATGTAGGGAAAGGCTGCGT	59.672	50.000	0.00	0.00	0.00	5.24
3034	3300	1.200519	ATGTAGGGAAAGGCTGCGTA	58.799	50.000	0.00	0.00	0.00	4.42
3035	3301	0.248289	TGTAGGGAAAGGCTGCGTAC	59.752	55.000	0.00	0.00	37.28	3.67
3036	3302	0.535797	GTAGGGAAAGGCTGCGTACT	59.464	55.000	0.00	0.00	34.81	2.73
3037	3303	1.753073	GTAGGGAAAGGCTGCGTACTA	59.247	52.381	0.00	0.00	34.81	1.82
3038	3304	1.497161	AGGGAAAGGCTGCGTACTAT	58.503	50.000	0.00	0.00	0.00	2.12
3039	3305	2.674420	AGGGAAAGGCTGCGTACTATA	58.326	47.619	0.00	0.00	0.00	1.31
3040	3306	2.628657	AGGGAAAGGCTGCGTACTATAG	59.371	50.000	0.00	0.00	0.00	1.31
3041	3307	2.626743	GGGAAAGGCTGCGTACTATAGA	59.373	50.000	6.78	0.00	0.00	1.98
3042	3308	3.552478	GGGAAAGGCTGCGTACTATAGAC	60.552	52.174	6.78	0.00	0.00	2.59
3043	3309	3.552478	GGAAAGGCTGCGTACTATAGACC	60.552	52.174	6.78	0.00	0.00	3.85
3044	3310	1.618487	AGGCTGCGTACTATAGACCC	58.382	55.000	6.78	0.00	0.00	4.46
3045	3311	1.133575	AGGCTGCGTACTATAGACCCA	60.134	52.381	6.78	0.00	0.00	4.51
3046	3312	1.684983	GGCTGCGTACTATAGACCCAA	59.315	52.381	6.78	0.00	0.00	4.12
3047	3313	2.101917	GGCTGCGTACTATAGACCCAAA	59.898	50.000	6.78	0.00	0.00	3.28
3048	3314	3.381949	GCTGCGTACTATAGACCCAAAG	58.618	50.000	6.78	0.00	0.00	2.77
3049	3315	3.181478	GCTGCGTACTATAGACCCAAAGT	60.181	47.826	6.78	0.00	0.00	2.66
3050	3316	4.360563	CTGCGTACTATAGACCCAAAGTG	58.639	47.826	6.78	0.00	0.00	3.16
3051	3317	3.131577	TGCGTACTATAGACCCAAAGTGG	59.868	47.826	6.78	0.00	37.25	4.00
3052	3318	3.131755	GCGTACTATAGACCCAAAGTGGT	59.868	47.826	6.78	0.00	42.79	4.16
3057	3323	4.373771	GACCCAAAGTGGTCGGAC	57.626	61.111	0.00	0.00	44.98	4.79
3058	3324	1.302271	GACCCAAAGTGGTCGGACC	60.302	63.158	20.36	20.36	44.98	4.46
3059	3325	2.033602	CCCAAAGTGGTCGGACCC	59.966	66.667	23.81	14.91	37.50	4.46
3060	3326	2.526046	CCCAAAGTGGTCGGACCCT	61.526	63.158	23.81	16.82	37.50	4.34
3061	3327	1.454539	CCAAAGTGGTCGGACCCTT	59.545	57.895	23.81	21.08	37.50	3.95
3062	3328	0.605589	CCAAAGTGGTCGGACCCTTC	60.606	60.000	23.81	13.97	37.50	3.46
3063	3329	0.605589	CAAAGTGGTCGGACCCTTCC	60.606	60.000	23.81	9.51	37.50	3.46
3064	3330	1.775934	AAAGTGGTCGGACCCTTCCC	61.776	60.000	23.81	7.17	38.99	3.97
3065	3331	2.606826	GTGGTCGGACCCTTCCCT	60.607	66.667	23.81	0.00	38.99	4.20
3066	3332	2.606519	TGGTCGGACCCTTCCCTG	60.607	66.667	23.81	0.00	38.99	4.45
3067	3333	3.400054	GGTCGGACCCTTCCCTGG	61.400	72.222	16.55	0.00	38.99	4.45
3068	3334	2.284405	GTCGGACCCTTCCCTGGA	60.284	66.667	0.00	0.00	38.99	3.86
3069	3335	2.284405	TCGGACCCTTCCCTGGAC	60.284	66.667	0.00	0.00	38.99	4.02
3070	3336	3.400054	CGGACCCTTCCCTGGACC	61.400	72.222	0.00	0.00	38.99	4.46
3071	3337	3.015753	GGACCCTTCCCTGGACCC	61.016	72.222	0.00	0.00	35.57	4.46
3072	3338	2.125225	GACCCTTCCCTGGACCCT	59.875	66.667	0.00	0.00	0.00	4.34
3073	3339	2.204151	ACCCTTCCCTGGACCCTG	60.204	66.667	0.00	0.00	0.00	4.45
3074	3340	3.732849	CCCTTCCCTGGACCCTGC	61.733	72.222	0.00	0.00	0.00	4.85
3075	3341	4.101448	CCTTCCCTGGACCCTGCG	62.101	72.222	0.00	0.00	0.00	5.18
3076	3342	4.785453	CTTCCCTGGACCCTGCGC	62.785	72.222	0.00	0.00	0.00	6.09
3101	3367	3.558674	GAGCTACATGCACCAGGTT	57.441	52.632	0.00	0.00	45.94	3.50
3102	3368	1.089920	GAGCTACATGCACCAGGTTG	58.910	55.000	0.00	0.00	45.94	3.77
3103	3369	0.962356	AGCTACATGCACCAGGTTGC	60.962	55.000	8.03	8.03	44.17	4.17
3104	3370	1.937546	GCTACATGCACCAGGTTGCC	61.938	60.000	10.46	0.00	39.88	4.52
3105	3371	1.304052	TACATGCACCAGGTTGCCC	60.304	57.895	10.46	0.00	42.25	5.36
3106	3372	1.788518	TACATGCACCAGGTTGCCCT	61.789	55.000	10.46	0.00	42.25	5.19
3107	3373	1.909781	CATGCACCAGGTTGCCCTT	60.910	57.895	10.46	0.00	42.25	3.95
3108	3374	1.152269	ATGCACCAGGTTGCCCTTT	60.152	52.632	10.46	0.00	42.25	3.11
3109	3375	0.763986	ATGCACCAGGTTGCCCTTTT	60.764	50.000	10.46	0.00	42.25	2.27
3110	3376	0.980231	TGCACCAGGTTGCCCTTTTT	60.980	50.000	10.46	0.00	42.25	1.94
3193	3459	4.382754	GTCATTTTGGCTACTTTTGCTTCG	59.617	41.667	0.00	0.00	0.00	3.79
3201	3471	3.433615	GCTACTTTTGCTTCGAGTCACAT	59.566	43.478	0.00	0.00	0.00	3.21
3216	3486	5.637810	CGAGTCACATTTGGCTAGTTTTCTA	59.362	40.000	0.00	0.00	38.01	2.10
3222	3492	7.029563	CACATTTGGCTAGTTTTCTAATGGAC	58.970	38.462	0.00	0.00	29.88	4.02
3278	3552	5.818887	TGTATGGCAGCATATATGGATGTT	58.181	37.500	14.51	0.00	0.00	2.71
3529	3893	1.754803	AGGATGTTTGGCTGCATGATG	59.245	47.619	0.50	0.00	0.00	3.07
3530	3894	1.479323	GGATGTTTGGCTGCATGATGT	59.521	47.619	0.50	0.00	0.00	3.06
3531	3895	2.689471	GGATGTTTGGCTGCATGATGTA	59.311	45.455	0.50	0.00	0.00	2.29
3532	3896	3.489738	GGATGTTTGGCTGCATGATGTAC	60.490	47.826	0.50	0.00	0.00	2.90
3533	3897	2.794103	TGTTTGGCTGCATGATGTACT	58.206	42.857	0.50	0.00	0.00	2.73
3534	3898	2.749076	TGTTTGGCTGCATGATGTACTC	59.251	45.455	0.50	0.00	0.00	2.59
3535	3899	2.042686	TTGGCTGCATGATGTACTCC	57.957	50.000	0.50	0.00	0.00	3.85
3564	3928	1.542915	CATCAAGTTCCACAGCTTGGG	59.457	52.381	12.99	4.82	46.92	4.12
3580	3944	3.637184	GGGTAACATCACACCCGTT	57.363	52.632	0.00	0.00	44.87	4.44
3633	3998	5.733676	TGTTGCTAACTGATCATCAAGCTA	58.266	37.500	18.54	11.77	31.09	3.32
3671	4036	3.553095	AACCGCTGAGGCTTCCCAC	62.553	63.158	0.00	0.00	46.52	4.61
3694	4059	4.631740	TGGCCCTCGGTGTCCTCA	62.632	66.667	0.00	0.00	0.00	3.86
3699	4064	0.324943	CCCTCGGTGTCCTCATTTGT	59.675	55.000	0.00	0.00	0.00	2.83
3715	4080	4.158949	TCATTTGTCATGGCAAGAATCTGG	59.841	41.667	13.27	0.00	0.00	3.86
3727	4092	4.021916	CAAGAATCTGGGGCAAAGAATCT	58.978	43.478	1.55	1.55	35.82	2.40
3784	4149	1.076412	TTGTGCAGGTTCAGGCCAA	60.076	52.632	5.01	0.00	0.00	4.52
3801	4166	3.075148	GCCAACTTTCCTTAGTCTGTCC	58.925	50.000	0.00	0.00	0.00	4.02

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	2.023888	ACTCTGTGGTGGCTAGTCCTAT	60.024	50.000	0.00	0.00	35.26	2.57
1	2	1.358103	ACTCTGTGGTGGCTAGTCCTA	59.642	52.381	0.00	0.00	35.26	2.94
2	3	0.115349	ACTCTGTGGTGGCTAGTCCT	59.885	55.000	0.00	0.00	35.26	3.85
3	4	1.751924	CTACTCTGTGGTGGCTAGTCC	59.248	57.143	0.00	0.00	0.00	3.85
4	5	1.751924	CCTACTCTGTGGTGGCTAGTC	59.248	57.143	0.00	0.00	0.00	2.59
5	6	1.358103	TCCTACTCTGTGGTGGCTAGT	59.642	52.381	0.00	0.00	0.00	2.57
6	7	2.028130	CTCCTACTCTGTGGTGGCTAG	58.972	57.143	0.00	0.00	0.00	3.42
7	8	1.342076	CCTCCTACTCTGTGGTGGCTA	60.342	57.143	0.00	0.00	31.42	3.93
8	9	0.616111	CCTCCTACTCTGTGGTGGCT	60.616	60.000	0.00	0.00	31.42	4.75
9	10	1.617947	CCCTCCTACTCTGTGGTGGC	61.618	65.000	0.00	0.00	36.10	5.01
10	11	0.041238	TCCCTCCTACTCTGTGGTGG	59.959	60.000	0.00	0.00	36.90	4.61
11	12	1.938585	TTCCCTCCTACTCTGTGGTG	58.061	55.000	0.00	0.00	0.00	4.17
12	13	2.715763	TTTCCCTCCTACTCTGTGGT	57.284	50.000	0.00	0.00	0.00	4.16
13	14	3.173965	TCTTTTCCCTCCTACTCTGTGG	58.826	50.000	0.00	0.00	0.00	4.17
14	15	3.196685	CCTCTTTTCCCTCCTACTCTGTG	59.803	52.174	0.00	0.00	0.00	3.66
15	16	3.077695	TCCTCTTTTCCCTCCTACTCTGT	59.922	47.826	0.00	0.00	0.00	3.41
16	17	3.449377	GTCCTCTTTTCCCTCCTACTCTG	59.551	52.174	0.00	0.00	0.00	3.35
17	18	3.077695	TGTCCTCTTTTCCCTCCTACTCT	59.922	47.826	0.00	0.00	0.00	3.24
18	19	3.196039	GTGTCCTCTTTTCCCTCCTACTC	59.804	52.174	0.00	0.00	0.00	2.59
19	20	3.174779	GTGTCCTCTTTTCCCTCCTACT	58.825	50.000	0.00	0.00	0.00	2.57
20	21	2.236644	GGTGTCCTCTTTTCCCTCCTAC	59.763	54.545	0.00	0.00	0.00	3.18
21	22	2.158066	TGGTGTCCTCTTTTCCCTCCTA	60.158	50.000	0.00	0.00	0.00	2.94
22	23	1.363246	GGTGTCCTCTTTTCCCTCCT	58.637	55.000	0.00	0.00	0.00	3.69
23	24	1.003696	CTGGTGTCCTCTTTTCCCTCC	59.996	57.143	0.00	0.00	0.00	4.30
24	25	1.978580	TCTGGTGTCCTCTTTTCCCTC	59.021	52.381	0.00	0.00	0.00	4.30
25	26	2.118403	TCTGGTGTCCTCTTTTCCCT	57.882	50.000	0.00	0.00	0.00	4.20
26	27	2.356227	GGATCTGGTGTCCTCTTTTCCC	60.356	54.545	0.00	0.00	32.85	3.97
27	28	2.678190	CGGATCTGGTGTCCTCTTTTCC	60.678	54.545	0.00	0.00	33.46	3.13
28	29	2.622436	CGGATCTGGTGTCCTCTTTTC	58.378	52.381	0.00	0.00	33.46	2.29
29	30	1.279271	CCGGATCTGGTGTCCTCTTTT	59.721	52.381	12.93	0.00	33.46	2.27
30	31	0.905357	CCGGATCTGGTGTCCTCTTT	59.095	55.000	12.93	0.00	33.46	2.52
31	32	0.041238	TCCGGATCTGGTGTCCTCTT	59.959	55.000	20.32	0.00	33.46	2.85
32	33	0.263172	ATCCGGATCTGGTGTCCTCT	59.737	55.000	20.32	0.00	33.46	3.69
33	34	1.069358	GAATCCGGATCTGGTGTCCTC	59.931	57.143	19.43	4.17	33.46	3.71
34	35	1.123928	GAATCCGGATCTGGTGTCCT	58.876	55.000	19.43	0.00	33.46	3.85
35	36	0.830648	TGAATCCGGATCTGGTGTCC	59.169	55.000	19.43	8.85	0.00	4.02
36	37	2.691409	TTGAATCCGGATCTGGTGTC	57.309	50.000	19.43	17.45	0.00	3.67
37	38	2.158755	GGATTGAATCCGGATCTGGTGT	60.159	50.000	19.43	9.34	40.13	4.16
38	39	2.498167	GGATTGAATCCGGATCTGGTG	58.502	52.381	19.43	0.00	40.13	4.17
39	40	2.938956	GGATTGAATCCGGATCTGGT	57.061	50.000	19.43	0.58	40.13	4.00
47	48	3.995846	CCTCTTGGGAAGGATTGAATCCG	60.996	52.174	17.86	2.90	45.79	4.18
48	49	3.560105	CCTCTTGGGAAGGATTGAATCC	58.440	50.000	16.35	16.35	43.26	3.01
49	50	2.954989	GCCTCTTGGGAAGGATTGAATC	59.045	50.000	0.00	0.00	37.23	2.52
50	51	2.312741	TGCCTCTTGGGAAGGATTGAAT	59.687	45.455	0.00	0.00	37.23	2.57
51	52	1.710244	TGCCTCTTGGGAAGGATTGAA	59.290	47.619	0.00	0.00	37.23	2.69
52	53	1.371467	TGCCTCTTGGGAAGGATTGA	58.629	50.000	0.00	0.00	37.23	2.57
53	54	2.305009	GATGCCTCTTGGGAAGGATTG	58.695	52.381	0.00	0.00	37.19	2.67
54	55	1.925255	TGATGCCTCTTGGGAAGGATT	59.075	47.619	0.00	0.00	37.19	3.01
55	56	1.213926	GTGATGCCTCTTGGGAAGGAT	59.786	52.381	0.00	0.00	37.19	3.24
56	57	0.620556	GTGATGCCTCTTGGGAAGGA	59.379	55.000	0.00	0.00	37.19	3.36
57	58	0.394899	GGTGATGCCTCTTGGGAAGG	60.395	60.000	0.00	0.00	37.19	3.46
58	59	0.622665	AGGTGATGCCTCTTGGGAAG	59.377	55.000	0.00	0.00	46.96	3.46
59	60	2.791253	AGGTGATGCCTCTTGGGAA	58.209	52.632	0.00	0.00	46.96	3.97
60	61	4.587520	AGGTGATGCCTCTTGGGA	57.412	55.556	0.00	0.00	46.96	4.37
68	69	1.168714	GTTCTTGTGGAGGTGATGCC	58.831	55.000	0.00	0.00	37.58	4.40
69	70	2.079925	GAGTTCTTGTGGAGGTGATGC	58.920	52.381	0.00	0.00	0.00	3.91
70	71	2.304180	AGGAGTTCTTGTGGAGGTGATG	59.696	50.000	0.00	0.00	0.00	3.07
71	72	2.569404	GAGGAGTTCTTGTGGAGGTGAT	59.431	50.000	0.00	0.00	0.00	3.06
72	73	1.971357	GAGGAGTTCTTGTGGAGGTGA	59.029	52.381	0.00	0.00	0.00	4.02
73	74	1.002544	GGAGGAGTTCTTGTGGAGGTG	59.997	57.143	0.00	0.00	0.00	4.00
74	75	1.353091	GGAGGAGTTCTTGTGGAGGT	58.647	55.000	0.00	0.00	0.00	3.85
75	76	0.615850	GGGAGGAGTTCTTGTGGAGG	59.384	60.000	0.00	0.00	0.00	4.30
76	77	0.615850	GGGGAGGAGTTCTTGTGGAG	59.384	60.000	0.00	0.00	0.00	3.86
77	78	0.193574	AGGGGAGGAGTTCTTGTGGA	59.806	55.000	0.00	0.00	0.00	4.02
78	79	0.615850	GAGGGGAGGAGTTCTTGTGG	59.384	60.000	0.00	0.00	0.00	4.17
79	80	0.247736	CGAGGGGAGGAGTTCTTGTG	59.752	60.000	0.00	0.00	0.00	3.33
80	81	1.545706	GCGAGGGGAGGAGTTCTTGT	61.546	60.000	0.00	0.00	0.00	3.16
81	82	1.219393	GCGAGGGGAGGAGTTCTTG	59.781	63.158	0.00	0.00	0.00	3.02
82	83	2.352032	CGCGAGGGGAGGAGTTCTT	61.352	63.158	0.00	0.00	0.00	2.52
83	84	2.756283	CGCGAGGGGAGGAGTTCT	60.756	66.667	0.00	0.00	0.00	3.01
84	85	2.754658	TCGCGAGGGGAGGAGTTC	60.755	66.667	3.71	0.00	0.00	3.01
85	86	2.756283	CTCGCGAGGGGAGGAGTT	60.756	66.667	28.40	0.00	38.66	3.01
95	96	1.807573	GGAAGAACTGCCTCGCGAG	60.808	63.158	29.06	29.06	0.00	5.03
96	97	1.816863	AAGGAAGAACTGCCTCGCGA	61.817	55.000	9.26	9.26	32.07	5.87
97	98	0.951040	AAAGGAAGAACTGCCTCGCG	60.951	55.000	0.00	0.00	32.07	5.87
98	99	0.519077	CAAAGGAAGAACTGCCTCGC	59.481	55.000	1.36	0.00	32.07	5.03
99	100	1.884235	ACAAAGGAAGAACTGCCTCG	58.116	50.000	1.36	0.00	32.07	4.63
100	101	4.762251	ACAATACAAAGGAAGAACTGCCTC	59.238	41.667	1.36	0.00	32.07	4.70
101	102	4.729868	ACAATACAAAGGAAGAACTGCCT	58.270	39.130	0.00	0.00	35.61	4.75
102	103	5.009610	TGAACAATACAAAGGAAGAACTGCC	59.990	40.000	0.00	0.00	0.00	4.85
103	104	6.072112	TGAACAATACAAAGGAAGAACTGC	57.928	37.500	0.00	0.00	0.00	4.40
104	105	7.805071	GTGATGAACAATACAAAGGAAGAACTG	59.195	37.037	0.00	0.00	0.00	3.16
105	106	7.040409	GGTGATGAACAATACAAAGGAAGAACT	60.040	37.037	0.00	0.00	0.00	3.01
106	107	7.084486	GGTGATGAACAATACAAAGGAAGAAC	58.916	38.462	0.00	0.00	0.00	3.01
107	108	6.775142	TGGTGATGAACAATACAAAGGAAGAA	59.225	34.615	0.00	0.00	0.00	2.52
108	109	6.303054	TGGTGATGAACAATACAAAGGAAGA	58.697	36.000	0.00	0.00	0.00	2.87
109	110	6.573664	TGGTGATGAACAATACAAAGGAAG	57.426	37.500	0.00	0.00	0.00	3.46
110	111	5.048083	GCTGGTGATGAACAATACAAAGGAA	60.048	40.000	0.00	0.00	0.00	3.36
111	112	4.458989	GCTGGTGATGAACAATACAAAGGA	59.541	41.667	0.00	0.00	0.00	3.36
112	113	4.380867	GGCTGGTGATGAACAATACAAAGG	60.381	45.833	0.00	0.00	0.00	3.11
113	114	4.380867	GGGCTGGTGATGAACAATACAAAG	60.381	45.833	0.00	0.00	0.00	2.77
114	115	3.509575	GGGCTGGTGATGAACAATACAAA	59.490	43.478	0.00	0.00	0.00	2.83
115	116	3.088532	GGGCTGGTGATGAACAATACAA	58.911	45.455	0.00	0.00	0.00	2.41
116	117	2.620367	GGGGCTGGTGATGAACAATACA	60.620	50.000	0.00	0.00	0.00	2.29
117	118	2.024414	GGGGCTGGTGATGAACAATAC	58.976	52.381	0.00	0.00	0.00	1.89
118	119	1.922447	AGGGGCTGGTGATGAACAATA	59.078	47.619	0.00	0.00	0.00	1.90
119	120	0.706433	AGGGGCTGGTGATGAACAAT	59.294	50.000	0.00	0.00	0.00	2.71
120	121	0.251297	CAGGGGCTGGTGATGAACAA	60.251	55.000	0.00	0.00	0.00	2.83
121	122	1.133181	TCAGGGGCTGGTGATGAACA	61.133	55.000	0.00	0.00	31.51	3.18
122	123	0.393537	CTCAGGGGCTGGTGATGAAC	60.394	60.000	0.00	0.00	31.51	3.18
123	124	1.565390	CCTCAGGGGCTGGTGATGAA	61.565	60.000	0.00	0.00	31.51	2.57
124	125	1.997311	CCTCAGGGGCTGGTGATGA	60.997	63.158	0.00	0.00	31.51	2.92
125	126	2.593978	CCTCAGGGGCTGGTGATG	59.406	66.667	0.00	0.00	31.51	3.07
134	135	2.276740	GGTGGATTGCCTCAGGGG	59.723	66.667	0.00	0.00	38.36	4.79
135	136	1.379044	GTGGTGGATTGCCTCAGGG	60.379	63.158	0.00	0.00	34.31	4.45
136	137	0.962356	GTGTGGTGGATTGCCTCAGG	60.962	60.000	0.00	0.00	31.22	3.86
137	138	0.962356	GGTGTGGTGGATTGCCTCAG	60.962	60.000	0.00	0.00	31.22	3.35
138	139	1.074775	GGTGTGGTGGATTGCCTCA	59.925	57.895	0.00	0.00	34.31	3.86
139	140	1.074775	TGGTGTGGTGGATTGCCTC	59.925	57.895	0.00	0.00	34.31	4.70
140	141	1.228552	GTGGTGTGGTGGATTGCCT	60.229	57.895	0.00	0.00	34.31	4.75
141	142	1.112315	TTGTGGTGTGGTGGATTGCC	61.112	55.000	0.00	0.00	0.00	4.52
142	143	0.749649	TTTGTGGTGTGGTGGATTGC	59.250	50.000	0.00	0.00	0.00	3.56
143	144	2.031120	AGTTTGTGGTGTGGTGGATTG	58.969	47.619	0.00	0.00	0.00	2.67
144	145	2.452600	AGTTTGTGGTGTGGTGGATT	57.547	45.000	0.00	0.00	0.00	3.01
145	146	2.708861	TCTAGTTTGTGGTGTGGTGGAT	59.291	45.455	0.00	0.00	0.00	3.41
146	147	2.104111	CTCTAGTTTGTGGTGTGGTGGA	59.896	50.000	0.00	0.00	0.00	4.02
147	148	2.158813	ACTCTAGTTTGTGGTGTGGTGG	60.159	50.000	0.00	0.00	0.00	4.61
148	149	3.194005	ACTCTAGTTTGTGGTGTGGTG	57.806	47.619	0.00	0.00	0.00	4.17
149	150	3.323979	CCTACTCTAGTTTGTGGTGTGGT	59.676	47.826	0.00	0.00	0.00	4.16
150	151	3.306780	CCCTACTCTAGTTTGTGGTGTGG	60.307	52.174	0.00	0.00	0.00	4.17
151	152	3.323979	ACCCTACTCTAGTTTGTGGTGTG	59.676	47.826	0.00	0.00	0.00	3.82
152	153	3.584294	ACCCTACTCTAGTTTGTGGTGT	58.416	45.455	0.00	0.00	0.00	4.16
153	154	5.934402	ATACCCTACTCTAGTTTGTGGTG	57.066	43.478	0.00	0.00	0.00	4.17
154	155	6.955851	TGTAATACCCTACTCTAGTTTGTGGT	59.044	38.462	0.00	0.00	0.00	4.16
155	156	7.263496	GTGTAATACCCTACTCTAGTTTGTGG	58.737	42.308	0.00	0.00	0.00	4.17
156	157	7.263496	GGTGTAATACCCTACTCTAGTTTGTG	58.737	42.308	0.00	0.00	44.15	3.33
157	158	7.415592	GGTGTAATACCCTACTCTAGTTTGT	57.584	40.000	0.00	0.00	44.15	2.83
181	182	0.322098	TAGTTCGGGCCACCATTGTG	60.322	55.000	4.39	0.00	42.39	3.33
182	183	0.035439	CTAGTTCGGGCCACCATTGT	60.035	55.000	4.39	0.00	36.13	2.71
183	184	0.035439	ACTAGTTCGGGCCACCATTG	60.035	55.000	4.39	0.00	36.13	2.82
184	185	1.575419	TACTAGTTCGGGCCACCATT	58.425	50.000	4.39	0.00	36.13	3.16
185	186	1.802553	ATACTAGTTCGGGCCACCAT	58.197	50.000	4.39	0.00	36.13	3.55
186	187	2.457813	TATACTAGTTCGGGCCACCA	57.542	50.000	4.39	0.00	36.13	4.17
187	188	3.461061	GTTTATACTAGTTCGGGCCACC	58.539	50.000	4.39	0.00	0.00	4.61
188	189	3.133542	AGGTTTATACTAGTTCGGGCCAC	59.866	47.826	4.39	0.00	0.00	5.01
189	190	3.377573	AGGTTTATACTAGTTCGGGCCA	58.622	45.455	4.39	0.00	0.00	5.36
190	191	3.551659	CGAGGTTTATACTAGTTCGGGCC	60.552	52.174	0.00	0.00	0.00	5.80
191	192	3.067320	ACGAGGTTTATACTAGTTCGGGC	59.933	47.826	13.65	0.00	0.00	6.13
192	193	4.096984	ACACGAGGTTTATACTAGTTCGGG	59.903	45.833	10.71	10.71	36.19	5.14
193	194	5.240713	ACACGAGGTTTATACTAGTTCGG	57.759	43.478	13.65	6.76	0.00	4.30
194	195	5.269313	GGACACGAGGTTTATACTAGTTCG	58.731	45.833	0.00	4.92	0.00	3.95
195	196	5.359292	AGGGACACGAGGTTTATACTAGTTC	59.641	44.000	0.00	0.00	0.00	3.01
196	197	5.267587	AGGGACACGAGGTTTATACTAGTT	58.732	41.667	0.00	0.00	0.00	2.24
197	198	4.864726	AGGGACACGAGGTTTATACTAGT	58.135	43.478	0.00	0.00	0.00	2.57
198	199	5.126707	ACAAGGGACACGAGGTTTATACTAG	59.873	44.000	0.00	0.00	0.00	2.57
199	200	5.018809	ACAAGGGACACGAGGTTTATACTA	58.981	41.667	0.00	0.00	0.00	1.82
200	201	3.836562	ACAAGGGACACGAGGTTTATACT	59.163	43.478	0.00	0.00	0.00	2.12
201	202	3.930848	CACAAGGGACACGAGGTTTATAC	59.069	47.826	0.00	0.00	0.00	1.47
202	203	3.579586	ACACAAGGGACACGAGGTTTATA	59.420	43.478	0.00	0.00	0.00	0.98
203	204	2.370849	ACACAAGGGACACGAGGTTTAT	59.629	45.455	0.00	0.00	0.00	1.40
204	205	1.764134	ACACAAGGGACACGAGGTTTA	59.236	47.619	0.00	0.00	0.00	2.01
205	206	0.544697	ACACAAGGGACACGAGGTTT	59.455	50.000	0.00	0.00	0.00	3.27
206	207	0.544697	AACACAAGGGACACGAGGTT	59.455	50.000	0.00	0.00	0.00	3.50
207	208	0.179056	CAACACAAGGGACACGAGGT	60.179	55.000	0.00	0.00	0.00	3.85
208	209	0.179056	ACAACACAAGGGACACGAGG	60.179	55.000	0.00	0.00	0.00	4.63
209	210	1.597663	GAACAACACAAGGGACACGAG	59.402	52.381	0.00	0.00	0.00	4.18
210	211	1.208535	AGAACAACACAAGGGACACGA	59.791	47.619	0.00	0.00	0.00	4.35
211	212	1.663695	AGAACAACACAAGGGACACG	58.336	50.000	0.00	0.00	0.00	4.49
212	213	2.031683	CGAAGAACAACACAAGGGACAC	59.968	50.000	0.00	0.00	0.00	3.67
213	214	2.285083	CGAAGAACAACACAAGGGACA	58.715	47.619	0.00	0.00	0.00	4.02
214	215	2.031683	CACGAAGAACAACACAAGGGAC	59.968	50.000	0.00	0.00	0.00	4.46
215	216	2.285083	CACGAAGAACAACACAAGGGA	58.715	47.619	0.00	0.00	0.00	4.20
216	217	2.014128	ACACGAAGAACAACACAAGGG	58.986	47.619	0.00	0.00	0.00	3.95
217	218	3.869246	ACTACACGAAGAACAACACAAGG	59.131	43.478	0.00	0.00	0.00	3.61
218	219	5.464965	AACTACACGAAGAACAACACAAG	57.535	39.130	0.00	0.00	0.00	3.16
219	220	5.866335	AAACTACACGAAGAACAACACAA	57.134	34.783	0.00	0.00	0.00	3.33
220	221	6.331845	TCTAAACTACACGAAGAACAACACA	58.668	36.000	0.00	0.00	0.00	3.72
221	222	6.817270	TCTAAACTACACGAAGAACAACAC	57.183	37.500	0.00	0.00	0.00	3.32
222	223	6.643770	GGATCTAAACTACACGAAGAACAACA	59.356	38.462	0.00	0.00	0.00	3.33
223	224	6.867293	AGGATCTAAACTACACGAAGAACAAC	59.133	38.462	0.00	0.00	0.00	3.32
224	225	6.989659	AGGATCTAAACTACACGAAGAACAA	58.010	36.000	0.00	0.00	0.00	2.83
225	226	6.585695	AGGATCTAAACTACACGAAGAACA	57.414	37.500	0.00	0.00	0.00	3.18
226	227	6.183360	GCAAGGATCTAAACTACACGAAGAAC	60.183	42.308	0.00	0.00	0.00	3.01
227	228	5.867716	GCAAGGATCTAAACTACACGAAGAA	59.132	40.000	0.00	0.00	0.00	2.52
228	229	5.408356	GCAAGGATCTAAACTACACGAAGA	58.592	41.667	0.00	0.00	0.00	2.87
229	230	4.265556	CGCAAGGATCTAAACTACACGAAG	59.734	45.833	0.00	0.00	0.00	3.79
230	231	4.082625	TCGCAAGGATCTAAACTACACGAA	60.083	41.667	0.00	0.00	38.47	3.85
231	232	3.441222	TCGCAAGGATCTAAACTACACGA	59.559	43.478	0.00	0.00	38.47	4.35
232	233	3.766151	TCGCAAGGATCTAAACTACACG	58.234	45.455	0.00	0.00	38.47	4.49
233	234	4.113354	CCTCGCAAGGATCTAAACTACAC	58.887	47.826	0.00	0.00	46.67	2.90
234	235	3.430374	GCCTCGCAAGGATCTAAACTACA	60.430	47.826	0.00	0.00	46.67	2.74
235	236	3.124560	GCCTCGCAAGGATCTAAACTAC	58.875	50.000	0.00	0.00	46.67	2.73
236	237	2.223735	CGCCTCGCAAGGATCTAAACTA	60.224	50.000	0.00	0.00	46.67	2.24
237	238	1.471676	CGCCTCGCAAGGATCTAAACT	60.472	52.381	0.00	0.00	46.67	2.66
238	239	0.931005	CGCCTCGCAAGGATCTAAAC	59.069	55.000	0.00	0.00	46.67	2.01
239	240	0.821517	TCGCCTCGCAAGGATCTAAA	59.178	50.000	0.00	0.00	46.67	1.85
240	241	0.102481	GTCGCCTCGCAAGGATCTAA	59.898	55.000	0.00	0.00	46.67	2.10
241	242	1.734137	GTCGCCTCGCAAGGATCTA	59.266	57.895	0.00	0.00	46.67	1.98
242	243	2.496817	GTCGCCTCGCAAGGATCT	59.503	61.111	0.00	0.00	46.67	2.75
243	244	2.956964	CGTCGCCTCGCAAGGATC	60.957	66.667	0.00	0.00	46.67	3.36
244	245	3.417275	CTCGTCGCCTCGCAAGGAT	62.417	63.158	0.00	0.00	46.67	3.24
245	246	4.116328	CTCGTCGCCTCGCAAGGA	62.116	66.667	0.00	0.00	46.67	3.36
246	247	4.116328	TCTCGTCGCCTCGCAAGG	62.116	66.667	0.00	0.00	46.44	3.61
247	248	2.874010	ATGTCTCGTCGCCTCGCAAG	62.874	60.000	0.00	0.00	0.00	4.01
248	249	1.650314	TATGTCTCGTCGCCTCGCAA	61.650	55.000	0.00	0.00	0.00	4.85
249	250	2.048312	CTATGTCTCGTCGCCTCGCA	62.048	60.000	0.00	0.00	0.00	5.10
250	251	1.369448	CTATGTCTCGTCGCCTCGC	60.369	63.158	0.00	0.00	0.00	5.03
251	252	1.280142	CCTATGTCTCGTCGCCTCG	59.720	63.158	0.00	0.00	0.00	4.63
252	253	1.590932	TACCTATGTCTCGTCGCCTC	58.409	55.000	0.00	0.00	0.00	4.70
253	254	1.948145	CTTACCTATGTCTCGTCGCCT	59.052	52.381	0.00	0.00	0.00	5.52
254	255	1.674962	ACTTACCTATGTCTCGTCGCC	59.325	52.381	0.00	0.00	0.00	5.54
255	256	3.059051	CCTACTTACCTATGTCTCGTCGC	60.059	52.174	0.00	0.00	0.00	5.19
256	257	4.375272	TCCTACTTACCTATGTCTCGTCG	58.625	47.826	0.00	0.00	0.00	5.12
257	258	4.756135	CCTCCTACTTACCTATGTCTCGTC	59.244	50.000	0.00	0.00	0.00	4.20
258	259	4.165758	ACCTCCTACTTACCTATGTCTCGT	59.834	45.833	0.00	0.00	0.00	4.18
259	260	4.515944	CACCTCCTACTTACCTATGTCTCG	59.484	50.000	0.00	0.00	0.00	4.04
260	261	5.299782	CACACCTCCTACTTACCTATGTCTC	59.700	48.000	0.00	0.00	0.00	3.36
261	262	5.044328	TCACACCTCCTACTTACCTATGTCT	60.044	44.000	0.00	0.00	0.00	3.41
262	263	5.198965	TCACACCTCCTACTTACCTATGTC	58.801	45.833	0.00	0.00	0.00	3.06
263	264	5.202746	TCACACCTCCTACTTACCTATGT	57.797	43.478	0.00	0.00	0.00	2.29
264	265	6.071984	AGATCACACCTCCTACTTACCTATG	58.928	44.000	0.00	0.00	0.00	2.23
265	266	6.282568	AGATCACACCTCCTACTTACCTAT	57.717	41.667	0.00	0.00	0.00	2.57
266	267	5.398809	GGAGATCACACCTCCTACTTACCTA	60.399	48.000	0.00	0.00	45.18	3.08
267	268	4.538738	GAGATCACACCTCCTACTTACCT	58.461	47.826	0.00	0.00	0.00	3.08
268	269	3.637694	GGAGATCACACCTCCTACTTACC	59.362	52.174	0.00	0.00	45.18	2.85
269	270	3.315749	CGGAGATCACACCTCCTACTTAC	59.684	52.174	0.00	0.00	46.15	2.34
270	271	3.552875	CGGAGATCACACCTCCTACTTA	58.447	50.000	0.00	0.00	46.15	2.24
271	272	2.379972	CGGAGATCACACCTCCTACTT	58.620	52.381	0.00	0.00	46.15	2.24
272	273	2.024825	GCGGAGATCACACCTCCTACT	61.025	57.143	0.00	0.00	46.15	2.57
273	274	0.386113	GCGGAGATCACACCTCCTAC	59.614	60.000	0.00	0.00	46.15	3.18
274	275	1.101635	CGCGGAGATCACACCTCCTA	61.102	60.000	0.00	0.00	46.15	2.94
275	276	2.418910	CGCGGAGATCACACCTCCT	61.419	63.158	0.00	0.00	46.15	3.69
276	277	2.105128	CGCGGAGATCACACCTCC	59.895	66.667	0.00	0.00	45.16	4.30
277	278	2.583593	GCGCGGAGATCACACCTC	60.584	66.667	8.83	0.00	0.00	3.85
278	279	4.498520	CGCGCGGAGATCACACCT	62.499	66.667	24.84	0.00	0.00	4.00
279	280	3.405592	TACGCGCGGAGATCACACC	62.406	63.158	35.22	0.00	0.00	4.16
280	281	2.101575	TACGCGCGGAGATCACAC	59.898	61.111	35.22	0.00	0.00	3.82
281	282	2.101575	GTACGCGCGGAGATCACA	59.898	61.111	35.22	5.15	0.00	3.58
282	283	2.654404	GGTACGCGCGGAGATCAC	60.654	66.667	35.22	19.42	0.00	3.06
283	284	3.896133	GGGTACGCGCGGAGATCA	61.896	66.667	35.22	8.58	0.00	2.92
284	285	4.642542	GGGGTACGCGCGGAGATC	62.643	72.222	35.22	18.65	0.00	2.75
293	294	0.735287	GTTCGAACTCTGGGGTACGC	60.735	60.000	20.97	0.29	43.69	4.42
294	295	0.108945	GGTTCGAACTCTGGGGTACG	60.109	60.000	26.32	0.00	0.00	3.67
295	296	1.264295	AGGTTCGAACTCTGGGGTAC	58.736	55.000	26.32	7.68	0.00	3.34
296	297	1.621814	CAAGGTTCGAACTCTGGGGTA	59.378	52.381	26.32	0.00	0.00	3.69
297	298	0.396811	CAAGGTTCGAACTCTGGGGT	59.603	55.000	26.32	5.73	0.00	4.95
298	299	0.685097	TCAAGGTTCGAACTCTGGGG	59.315	55.000	26.32	14.53	0.00	4.96
299	300	1.338200	CCTCAAGGTTCGAACTCTGGG	60.338	57.143	26.32	21.47	0.00	4.45
300	301	1.338200	CCCTCAAGGTTCGAACTCTGG	60.338	57.143	26.32	18.56	0.00	3.86
301	302	2.086054	CCCTCAAGGTTCGAACTCTG	57.914	55.000	26.32	21.77	0.00	3.35
312	313	2.592993	TTCCGGCAGACCCTCAAGG	61.593	63.158	0.00	0.00	43.78	3.61
313	314	1.376037	GTTCCGGCAGACCCTCAAG	60.376	63.158	0.00	0.00	0.00	3.02
314	315	2.747686	GTTCCGGCAGACCCTCAA	59.252	61.111	0.00	0.00	0.00	3.02
315	316	3.319198	GGTTCCGGCAGACCCTCA	61.319	66.667	0.00	0.00	0.00	3.86
327	328	1.022982	GGTGTCGGATTTCGGGTTCC	61.023	60.000	0.00	0.00	39.77	3.62
328	329	1.356527	CGGTGTCGGATTTCGGGTTC	61.357	60.000	0.00	0.00	39.77	3.62
329	330	1.375013	CGGTGTCGGATTTCGGGTT	60.375	57.895	0.00	0.00	39.77	4.11
330	331	2.263540	CGGTGTCGGATTTCGGGT	59.736	61.111	0.00	0.00	39.77	5.28
331	332	1.808390	GACGGTGTCGGATTTCGGG	60.808	63.158	0.00	0.00	41.39	5.14
332	333	1.808390	GGACGGTGTCGGATTTCGG	60.808	63.158	0.00	0.00	41.39	4.30
333	334	1.080366	TGGACGGTGTCGGATTTCG	60.080	57.895	0.00	0.00	41.39	3.46
334	335	0.320073	TGTGGACGGTGTCGGATTTC	60.320	55.000	0.00	0.00	41.39	2.17
335	336	0.323629	ATGTGGACGGTGTCGGATTT	59.676	50.000	0.00	0.00	41.39	2.17
336	337	0.108329	GATGTGGACGGTGTCGGATT	60.108	55.000	0.00	0.00	41.39	3.01
337	338	1.515954	GATGTGGACGGTGTCGGAT	59.484	57.895	0.00	0.00	41.39	4.18
338	339	2.642254	GGATGTGGACGGTGTCGGA	61.642	63.158	0.00	0.00	41.39	4.55
339	340	2.125673	GGATGTGGACGGTGTCGG	60.126	66.667	0.00	0.00	41.39	4.79
340	341	1.446099	CTGGATGTGGACGGTGTCG	60.446	63.158	0.00	0.00	43.02	4.35
341	342	1.741770	GCTGGATGTGGACGGTGTC	60.742	63.158	0.00	0.00	0.00	3.67
342	343	2.347490	GCTGGATGTGGACGGTGT	59.653	61.111	0.00	0.00	0.00	4.16
343	344	2.034879	GTGCTGGATGTGGACGGTG	61.035	63.158	0.00	0.00	0.00	4.94
344	345	2.347490	GTGCTGGATGTGGACGGT	59.653	61.111	0.00	0.00	0.00	4.83
367	368	1.781429	CTCGTCAGAGTTTGTCGTGTG	59.219	52.381	0.72	0.00	39.02	3.82
368	369	1.674441	TCTCGTCAGAGTTTGTCGTGT	59.326	47.619	0.72	0.00	44.65	4.49
369	370	2.401017	TCTCGTCAGAGTTTGTCGTG	57.599	50.000	0.72	0.00	44.65	4.35
370	371	3.066342	TCTTTCTCGTCAGAGTTTGTCGT	59.934	43.478	0.72	0.00	44.65	4.34
371	372	3.629058	TCTTTCTCGTCAGAGTTTGTCG	58.371	45.455	0.00	0.00	44.65	4.35
381	382	1.919240	TGCCCTACTCTTTCTCGTCA	58.081	50.000	0.00	0.00	0.00	4.35
398	399	0.308684	CATGCCCACGTCACATATGC	59.691	55.000	1.58	0.00	0.00	3.14
401	402	1.451207	GGCATGCCCACGTCACATA	60.451	57.895	27.24	0.00	0.00	2.29
402	403	2.751436	GGCATGCCCACGTCACAT	60.751	61.111	27.24	0.00	0.00	3.21
403	404	3.952508	AGGCATGCCCACGTCACA	61.953	61.111	33.14	0.00	36.58	3.58
404	405	3.434319	CAGGCATGCCCACGTCAC	61.434	66.667	33.14	5.59	36.58	3.67
405	406	4.720902	CCAGGCATGCCCACGTCA	62.721	66.667	33.14	0.00	36.58	4.35
432	433	1.733399	GTCCTGTCTTCCGCGTGTC	60.733	63.158	4.92	0.00	0.00	3.67
438	439	3.685214	CTCCGCGTCCTGTCTTCCG	62.685	68.421	4.92	0.00	0.00	4.30
459	460	4.953868	CGGTTGTGGCGACGTCCA	62.954	66.667	10.58	0.00	0.00	4.02
494	495	4.823790	AAAGCGGACGACACTTTTTAAT	57.176	36.364	0.00	0.00	29.51	1.40
547	550	9.108284	CAATTTTCATTTAAACCAGACCAAGTT	57.892	29.630	0.00	0.00	0.00	2.66
549	552	7.307930	GGCAATTTTCATTTAAACCAGACCAAG	60.308	37.037	0.00	0.00	0.00	3.61
573	576	3.310501	GGCAAATTTCATGCACATTAGGC	59.689	43.478	3.19	0.00	45.60	3.93
580	583	0.246086	TCCGGGCAAATTTCATGCAC	59.754	50.000	0.00	0.00	45.60	4.57
593	596	9.921637	TTTAAAATGAATATGAATAATCCGGGC	57.078	29.630	0.00	0.00	0.00	6.13
606	609	9.787532	CGTCCAGACACATTTTAAAATGAATAT	57.212	29.630	35.99	22.08	46.72	1.28
626	629	0.874390	CCCACACATCAAACGTCCAG	59.126	55.000	0.00	0.00	0.00	3.86
661	664	2.125673	CGCGGACAGTGTTAGGGG	60.126	66.667	0.00	0.00	0.00	4.79
681	685	3.809279	CACATTATCTATCCGCACAAGCA	59.191	43.478	0.00	0.00	42.27	3.91
693	697	6.819649	CACCCTTAAAACGGACACATTATCTA	59.180	38.462	0.00	0.00	0.00	1.98
699	703	2.882137	CACACCCTTAAAACGGACACAT	59.118	45.455	0.00	0.00	0.00	3.21
713	717	1.003355	CATCTCCAACGCACACCCT	60.003	57.895	0.00	0.00	0.00	4.34
724	728	2.369860	GTCACATATCAGGGCATCTCCA	59.630	50.000	0.00	0.00	36.21	3.86
754	758	5.505654	CGTTGCTCCACATTACTTTGTCTTT	60.506	40.000	0.00	0.00	0.00	2.52
755	759	4.024048	CGTTGCTCCACATTACTTTGTCTT	60.024	41.667	0.00	0.00	0.00	3.01
756	760	3.498397	CGTTGCTCCACATTACTTTGTCT	59.502	43.478	0.00	0.00	0.00	3.41
820	824	2.564062	CAAACAGGTCATGAGGGCATTT	59.436	45.455	0.00	0.00	30.68	2.32
836	969	3.056536	TGCTGCAACAAGGTAAACAAACA	60.057	39.130	0.00	0.00	0.00	2.83
875	1008	1.841663	TTCGTGAAAAGCTGAGCGGC	61.842	55.000	0.00	0.00	0.00	6.53
901	1034	1.807573	CGGAGCTGAGCGGAGTTTC	60.808	63.158	0.00	0.00	0.00	2.78
902	1035	2.262915	CGGAGCTGAGCGGAGTTT	59.737	61.111	0.00	0.00	0.00	2.66
903	1036	3.764466	CCGGAGCTGAGCGGAGTT	61.764	66.667	0.00	0.00	0.00	3.01
932	1190	1.992277	GAGGGGCAGCAGGAGAGAA	60.992	63.158	0.00	0.00	0.00	2.87
982	1247	1.482593	CATGGTCGAAGGAGGCTAAGT	59.517	52.381	0.00	0.00	0.00	2.24
984	1249	0.178068	GCATGGTCGAAGGAGGCTAA	59.822	55.000	0.00	0.00	0.00	3.09
1112	1377	2.915659	TCGGCACCTCTTCACGGT	60.916	61.111	0.00	0.00	34.38	4.83
1184	1449	1.215655	CGTCGATTTCGGATCTGGCC	61.216	60.000	0.62	0.00	40.29	5.36
1747	2012	1.659233	CGGCAATCAACCTGTGCAA	59.341	52.632	0.00	0.00	40.12	4.08
1846	2111	1.693083	GGACGCACACCGATGCTTAC	61.693	60.000	5.03	0.00	43.80	2.34
1854	2119	3.027170	GCATTCTGGACGCACACCG	62.027	63.158	0.00	0.00	44.21	4.94
1914	2179	1.072965	AGCAACCTCTCAAGACAAGGG	59.927	52.381	0.00	0.00	34.31	3.95
2077	2342	2.418746	CGAACATGGGAAGACGATCCTT	60.419	50.000	0.00	0.00	39.57	3.36
2162	2427	6.546395	ACAACTCAAGTGATATGCGATTTTC	58.454	36.000	0.00	0.00	0.00	2.29
2261	2526	5.535030	TCTGTACAGCTAAAGTCTTGACTGA	59.465	40.000	18.45	0.00	0.00	3.41
2372	2637	4.924305	ACACAACTAAGAGTTACCGACA	57.076	40.909	0.00	0.00	36.03	4.35
2499	2764	2.508439	CGGTGCTTACGACGCCAT	60.508	61.111	0.00	0.00	37.56	4.40
2538	2803	9.507329	TCCAATGCTATTGTCTTTATAGGAATC	57.493	33.333	7.71	0.00	31.10	2.52
2541	2806	9.288576	CATTCCAATGCTATTGTCTTTATAGGA	57.711	33.333	7.71	0.00	31.74	2.94
2808	3073	0.451783	GTCAACATGCGAATGGGTCC	59.548	55.000	8.61	0.00	0.00	4.46
2811	3076	2.164017	TCAATGTCAACATGCGAATGGG	59.836	45.455	8.61	0.00	36.56	4.00
2829	3094	1.573108	TGGGCCAAAACTGGTTTCAA	58.427	45.000	2.13	0.00	31.45	2.69
2852	3117	3.431572	GCTGATAAGCAAGAATAGCTCCG	59.568	47.826	0.00	0.00	42.53	4.63
2896	3162	3.740141	GCTGCAGCTGCCATTATTGATTT	60.740	43.478	34.64	0.00	41.18	2.17
2909	3175	0.956633	TTCTTCTTTGGCTGCAGCTG	59.043	50.000	35.82	22.82	41.70	4.24
2965	3231	7.578310	TTTCTATAGTACGCAACCTAGTGAT	57.422	36.000	0.00	0.00	0.00	3.06
2966	3232	7.067859	ACATTTCTATAGTACGCAACCTAGTGA	59.932	37.037	0.00	0.00	0.00	3.41
2967	3233	7.201145	ACATTTCTATAGTACGCAACCTAGTG	58.799	38.462	0.00	0.00	0.00	2.74
2968	3234	7.344095	ACATTTCTATAGTACGCAACCTAGT	57.656	36.000	0.00	0.00	0.00	2.57
2969	3235	9.343103	CATACATTTCTATAGTACGCAACCTAG	57.657	37.037	0.00	0.00	0.00	3.02
2970	3236	8.301720	CCATACATTTCTATAGTACGCAACCTA	58.698	37.037	0.00	0.00	0.00	3.08
2971	3237	7.014905	TCCATACATTTCTATAGTACGCAACCT	59.985	37.037	0.00	0.00	0.00	3.50
2972	3238	7.149973	TCCATACATTTCTATAGTACGCAACC	58.850	38.462	0.00	0.00	0.00	3.77
2973	3239	8.583810	TTCCATACATTTCTATAGTACGCAAC	57.416	34.615	0.00	0.00	0.00	4.17
2974	3240	9.037737	GTTTCCATACATTTCTATAGTACGCAA	57.962	33.333	0.00	0.00	0.00	4.85
2975	3241	8.198778	TGTTTCCATACATTTCTATAGTACGCA	58.801	33.333	0.00	0.00	0.00	5.24
2976	3242	8.583810	TGTTTCCATACATTTCTATAGTACGC	57.416	34.615	0.00	0.00	0.00	4.42
2977	3243	8.700644	GCTGTTTCCATACATTTCTATAGTACG	58.299	37.037	0.00	0.00	0.00	3.67
2978	3244	8.989980	GGCTGTTTCCATACATTTCTATAGTAC	58.010	37.037	0.00	0.00	0.00	2.73
2979	3245	8.934697	AGGCTGTTTCCATACATTTCTATAGTA	58.065	33.333	0.00	0.00	0.00	1.82
2980	3246	7.806180	AGGCTGTTTCCATACATTTCTATAGT	58.194	34.615	0.00	0.00	0.00	2.12
2981	3247	8.153550	AGAGGCTGTTTCCATACATTTCTATAG	58.846	37.037	0.00	0.00	0.00	1.31
2982	3248	8.034313	AGAGGCTGTTTCCATACATTTCTATA	57.966	34.615	0.00	0.00	0.00	1.31
2983	3249	6.904626	AGAGGCTGTTTCCATACATTTCTAT	58.095	36.000	0.00	0.00	0.00	1.98
2984	3250	6.313519	AGAGGCTGTTTCCATACATTTCTA	57.686	37.500	0.00	0.00	0.00	2.10
2985	3251	5.184892	AGAGGCTGTTTCCATACATTTCT	57.815	39.130	0.00	0.00	0.00	2.52
2986	3252	5.904362	AAGAGGCTGTTTCCATACATTTC	57.096	39.130	0.00	0.00	0.00	2.17
2987	3253	6.245408	TGTAAGAGGCTGTTTCCATACATTT	58.755	36.000	0.90	0.00	0.00	2.32
2988	3254	5.815581	TGTAAGAGGCTGTTTCCATACATT	58.184	37.500	0.90	0.00	0.00	2.71
2989	3255	5.189736	TCTGTAAGAGGCTGTTTCCATACAT	59.810	40.000	0.90	0.00	38.67	2.29
2990	3256	4.530553	TCTGTAAGAGGCTGTTTCCATACA	59.469	41.667	0.90	0.00	38.67	2.29
2991	3257	5.086104	TCTGTAAGAGGCTGTTTCCATAC	57.914	43.478	0.90	0.00	38.67	2.39
3005	3271	5.250774	AGCCTTTCCCTACATTTCTGTAAGA	59.749	40.000	0.00	0.00	44.68	2.10
3006	3272	5.355350	CAGCCTTTCCCTACATTTCTGTAAG	59.645	44.000	0.00	0.00	37.41	2.34
3007	3273	5.253330	CAGCCTTTCCCTACATTTCTGTAA	58.747	41.667	0.00	0.00	37.41	2.41
3008	3274	4.843728	CAGCCTTTCCCTACATTTCTGTA	58.156	43.478	0.00	0.00	36.79	2.74
3009	3275	3.690460	CAGCCTTTCCCTACATTTCTGT	58.310	45.455	0.00	0.00	39.49	3.41
3010	3276	2.424956	GCAGCCTTTCCCTACATTTCTG	59.575	50.000	0.00	0.00	0.00	3.02
3011	3277	2.728007	GCAGCCTTTCCCTACATTTCT	58.272	47.619	0.00	0.00	0.00	2.52
3012	3278	1.401905	CGCAGCCTTTCCCTACATTTC	59.598	52.381	0.00	0.00	0.00	2.17
3013	3279	1.271926	ACGCAGCCTTTCCCTACATTT	60.272	47.619	0.00	0.00	0.00	2.32
3014	3280	0.328258	ACGCAGCCTTTCCCTACATT	59.672	50.000	0.00	0.00	0.00	2.71
3015	3281	1.134491	GTACGCAGCCTTTCCCTACAT	60.134	52.381	0.00	0.00	0.00	2.29
3016	3282	0.248289	GTACGCAGCCTTTCCCTACA	59.752	55.000	0.00	0.00	0.00	2.74
3017	3283	0.535797	AGTACGCAGCCTTTCCCTAC	59.464	55.000	0.00	0.00	0.00	3.18
3018	3284	2.148446	TAGTACGCAGCCTTTCCCTA	57.852	50.000	0.00	0.00	0.00	3.53
3019	3285	1.497161	ATAGTACGCAGCCTTTCCCT	58.503	50.000	0.00	0.00	0.00	4.20
3020	3286	2.626743	TCTATAGTACGCAGCCTTTCCC	59.373	50.000	0.00	0.00	0.00	3.97
3021	3287	3.552478	GGTCTATAGTACGCAGCCTTTCC	60.552	52.174	0.00	0.00	0.00	3.13
3022	3288	3.552478	GGGTCTATAGTACGCAGCCTTTC	60.552	52.174	0.00	0.00	0.00	2.62
3023	3289	2.364647	GGGTCTATAGTACGCAGCCTTT	59.635	50.000	0.00	0.00	0.00	3.11
3024	3290	1.962100	GGGTCTATAGTACGCAGCCTT	59.038	52.381	0.00	0.00	0.00	4.35
3025	3291	1.133575	TGGGTCTATAGTACGCAGCCT	60.134	52.381	13.98	0.00	35.18	4.58
3026	3292	1.325355	TGGGTCTATAGTACGCAGCC	58.675	55.000	13.98	8.23	35.18	4.85
3027	3293	3.181478	ACTTTGGGTCTATAGTACGCAGC	60.181	47.826	16.00	2.07	40.36	5.25
3028	3294	4.360563	CACTTTGGGTCTATAGTACGCAG	58.639	47.826	16.00	11.29	40.36	5.18
3029	3295	3.131577	CCACTTTGGGTCTATAGTACGCA	59.868	47.826	13.98	13.98	37.94	5.24
3030	3296	3.131755	ACCACTTTGGGTCTATAGTACGC	59.868	47.826	0.00	6.13	43.37	4.42
3031	3297	4.996788	ACCACTTTGGGTCTATAGTACG	57.003	45.455	0.00	0.00	43.37	3.67
3041	3307	2.826003	GGGTCCGACCACTTTGGGT	61.826	63.158	19.43	0.00	43.37	4.51
3042	3308	2.033602	GGGTCCGACCACTTTGGG	59.966	66.667	19.43	0.00	43.37	4.12
3043	3309	0.605589	GAAGGGTCCGACCACTTTGG	60.606	60.000	19.43	0.00	41.02	3.28
3044	3310	0.605589	GGAAGGGTCCGACCACTTTG	60.606	60.000	19.43	0.00	41.02	2.77
3045	3311	1.759236	GGAAGGGTCCGACCACTTT	59.241	57.895	19.43	9.96	41.02	2.66
3046	3312	2.222013	GGGAAGGGTCCGACCACTT	61.222	63.158	19.43	17.88	46.04	3.16
3047	3313	2.606826	GGGAAGGGTCCGACCACT	60.607	66.667	19.43	10.80	46.04	4.00
3048	3314	2.606826	AGGGAAGGGTCCGACCAC	60.607	66.667	19.43	8.70	46.04	4.16
3049	3315	2.606519	CAGGGAAGGGTCCGACCA	60.607	66.667	19.43	0.00	46.04	4.02
3050	3316	3.400054	CCAGGGAAGGGTCCGACC	61.400	72.222	9.30	9.30	46.04	4.79
3051	3317	2.284405	TCCAGGGAAGGGTCCGAC	60.284	66.667	0.00	0.00	46.04	4.79
3052	3318	2.284405	GTCCAGGGAAGGGTCCGA	60.284	66.667	0.00	0.00	46.04	4.55
3053	3319	3.400054	GGTCCAGGGAAGGGTCCG	61.400	72.222	0.00	0.00	46.04	4.79
3054	3320	3.015753	GGGTCCAGGGAAGGGTCC	61.016	72.222	0.00	0.00	44.10	4.46
3055	3321	2.125225	AGGGTCCAGGGAAGGGTC	59.875	66.667	0.00	0.00	0.00	4.46
3056	3322	2.204151	CAGGGTCCAGGGAAGGGT	60.204	66.667	0.00	0.00	0.00	4.34
3057	3323	3.732849	GCAGGGTCCAGGGAAGGG	61.733	72.222	0.00	0.00	0.00	3.95
3058	3324	4.101448	CGCAGGGTCCAGGGAAGG	62.101	72.222	0.00	0.00	0.00	3.46
3059	3325	4.785453	GCGCAGGGTCCAGGGAAG	62.785	72.222	0.30	0.00	0.00	3.46
3071	3337	4.819761	TAGCTCCCGCTTGCGCAG	62.820	66.667	11.31	6.32	46.47	5.18
3074	3340	2.202932	ATGTAGCTCCCGCTTGCG	60.203	61.111	8.14	8.14	46.47	4.85
3075	3341	2.828128	GCATGTAGCTCCCGCTTGC	61.828	63.158	0.00	0.00	46.47	4.01
3076	3342	1.450134	TGCATGTAGCTCCCGCTTG	60.450	57.895	0.00	0.00	46.47	4.01
3077	3343	1.450312	GTGCATGTAGCTCCCGCTT	60.450	57.895	0.00	0.00	46.47	4.68
3083	3349	1.089920	CAACCTGGTGCATGTAGCTC	58.910	55.000	14.15	0.00	45.94	4.09
3084	3350	0.962356	GCAACCTGGTGCATGTAGCT	60.962	55.000	14.15	0.00	44.29	3.32
3085	3351	1.508088	GCAACCTGGTGCATGTAGC	59.492	57.895	6.00	6.00	44.29	3.58
3086	3352	2.183409	GGCAACCTGGTGCATGTAG	58.817	57.895	18.44	0.00	46.81	2.74
3087	3353	4.413928	GGCAACCTGGTGCATGTA	57.586	55.556	18.44	0.00	46.81	2.29
3111	3377	7.732025	TGTCAGTCCTAGTGATGTTCTAAAAA	58.268	34.615	0.00	0.00	29.14	1.94
3112	3378	7.232737	TCTGTCAGTCCTAGTGATGTTCTAAAA	59.767	37.037	0.00	0.00	29.14	1.52
3113	3379	6.719829	TCTGTCAGTCCTAGTGATGTTCTAAA	59.280	38.462	0.00	0.00	29.14	1.85
3114	3380	6.246163	TCTGTCAGTCCTAGTGATGTTCTAA	58.754	40.000	0.00	0.00	29.14	2.10
3115	3381	5.816682	TCTGTCAGTCCTAGTGATGTTCTA	58.183	41.667	0.00	0.00	29.14	2.10
3116	3382	4.667573	TCTGTCAGTCCTAGTGATGTTCT	58.332	43.478	0.00	0.00	29.14	3.01
3117	3383	5.590530	ATCTGTCAGTCCTAGTGATGTTC	57.409	43.478	0.00	0.00	29.14	3.18
3118	3384	5.481824	TCAATCTGTCAGTCCTAGTGATGTT	59.518	40.000	0.00	0.00	29.14	2.71
3119	3385	5.019470	TCAATCTGTCAGTCCTAGTGATGT	58.981	41.667	0.00	0.00	29.14	3.06
3120	3386	5.588958	TCAATCTGTCAGTCCTAGTGATG	57.411	43.478	0.00	0.00	29.14	3.07
3157	3423	7.902920	AGCCAAAATGACCATGATAAACTAT	57.097	32.000	0.00	0.00	0.00	2.12
3193	3459	5.948992	AGAAAACTAGCCAAATGTGACTC	57.051	39.130	0.00	0.00	0.00	3.36
3201	3471	7.775053	AATGTCCATTAGAAAACTAGCCAAA	57.225	32.000	0.00	0.00	0.00	3.28
3278	3552	3.663995	TTCCCGACGAAACAACATAGA	57.336	42.857	0.00	0.00	0.00	1.98
3531	3895	9.625646	TGTGGAACTTGATGCTAAATACGGAGT	62.626	40.741	0.00	0.00	41.69	3.85
3532	3896	5.006746	GTGGAACTTGATGCTAAATACGGAG	59.993	44.000	0.00	0.00	0.00	4.63
3533	3897	4.873827	GTGGAACTTGATGCTAAATACGGA	59.126	41.667	0.00	0.00	0.00	4.69
3534	3898	4.634004	TGTGGAACTTGATGCTAAATACGG	59.366	41.667	0.00	0.00	38.04	4.02
3535	3899	5.727791	GCTGTGGAACTTGATGCTAAATACG	60.728	44.000	0.00	0.00	38.04	3.06
3564	3928	4.939439	AGGAAATAACGGGTGTGATGTTAC	59.061	41.667	0.00	0.00	31.50	2.50
3580	3944	1.565759	AGGCCACTGATGCAGGAAATA	59.434	47.619	5.01	0.00	35.51	1.40
3694	4059	3.449737	CCCAGATTCTTGCCATGACAAAT	59.550	43.478	0.00	0.00	0.00	2.32
3699	4064	0.396139	GCCCCAGATTCTTGCCATGA	60.396	55.000	0.00	0.00	0.00	3.07
3715	4080	1.063717	TGGATCCCAGATTCTTTGCCC	60.064	52.381	9.90	0.00	0.00	5.36
3727	4092	1.067295	AAGCTGTTCACTGGATCCCA	58.933	50.000	9.90	0.00	0.00	4.37
3784	4149	6.130569	AGATATCGGACAGACTAAGGAAAGT	58.869	40.000	0.00	0.00	0.00	2.66
3801	4166	4.036498	ACTTCGGTACCACAAGAGATATCG	59.964	45.833	22.07	1.07	0.00	2.92

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.