Multiple sequence alignment - TraesCS5B01G161600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G161600 chr5B 100.000 3461 0 0 1 3461 297987388 297983928 0.000000e+00 6392
1 TraesCS5B01G161600 chr5B 93.762 513 29 3 2780 3290 14543232 14542721 0.000000e+00 767
2 TraesCS5B01G161600 chr5B 92.469 478 24 4 1860 2327 14553347 14552872 0.000000e+00 673
3 TraesCS5B01G161600 chr5B 93.919 444 25 2 2319 2761 14552346 14551904 0.000000e+00 669
4 TraesCS5B01G161600 chr5B 91.946 149 12 0 3142 3290 148486160 148486012 3.500000e-50 209
5 TraesCS5B01G161600 chr5A 90.530 1415 65 28 960 2327 326657633 326656241 0.000000e+00 1807
6 TraesCS5B01G161600 chr5A 93.737 958 43 8 1382 2327 528606600 528607552 0.000000e+00 1421
7 TraesCS5B01G161600 chr5A 93.636 440 15 4 2315 2753 528608074 528608501 0.000000e+00 645
8 TraesCS5B01G161600 chr5A 89.245 530 37 6 2763 3290 528608615 528609126 0.000000e+00 645
9 TraesCS5B01G161600 chr5A 96.170 235 6 3 2315 2548 326655830 326655598 7.010000e-102 381
10 TraesCS5B01G161600 chr5A 93.571 140 9 0 3151 3290 326655148 326655009 3.500000e-50 209
11 TraesCS5B01G161600 chr5A 86.755 151 19 1 5 154 292393169 292393319 2.140000e-37 167
12 TraesCS5B01G161600 chr2B 91.214 1104 56 20 1257 2327 53449497 53450592 0.000000e+00 1463
13 TraesCS5B01G161600 chr2B 92.424 990 54 14 2315 3290 53451112 53452094 0.000000e+00 1393
14 TraesCS5B01G161600 chr2B 93.111 958 50 7 1382 2327 335382501 335381548 0.000000e+00 1389
15 TraesCS5B01G161600 chr2B 89.434 530 36 9 2763 3290 335380485 335379974 0.000000e+00 651
16 TraesCS5B01G161600 chr2B 81.004 737 88 23 2315 3013 159888047 159887325 3.930000e-149 538
17 TraesCS5B01G161600 chr2B 91.254 343 13 2 960 1286 53449156 53449497 5.270000e-123 451
18 TraesCS5B01G161600 chr7B 93.958 960 41 9 1381 2327 198979346 198980301 0.000000e+00 1435
19 TraesCS5B01G161600 chr7B 86.983 653 41 14 2661 3290 198991498 198992129 0.000000e+00 695
20 TraesCS5B01G161600 chr7B 94.872 351 14 4 2315 2664 198980828 198981175 2.350000e-151 545
21 TraesCS5B01G161600 chr4B 93.958 960 41 10 1381 2327 220280072 220279117 0.000000e+00 1435
22 TraesCS5B01G161600 chr4B 90.400 1000 48 11 2315 3290 220278591 220277616 0.000000e+00 1271
23 TraesCS5B01G161600 chr4B 86.395 147 18 2 9 154 455404248 455404393 3.580000e-35 159
24 TraesCS5B01G161600 chr1B 93.215 958 48 8 1382 2327 19028082 19029034 0.000000e+00 1393
25 TraesCS5B01G161600 chr1B 89.245 530 37 6 2763 3290 19030099 19030610 0.000000e+00 645
26 TraesCS5B01G161600 chr2A 93.006 958 50 8 1382 2327 733866216 733867168 0.000000e+00 1382
27 TraesCS5B01G161600 chr2A 89.245 530 37 6 2763 3290 733868205 733868716 0.000000e+00 645
28 TraesCS5B01G161600 chr3B 92.230 991 47 16 2324 3290 823392984 823392000 0.000000e+00 1376
29 TraesCS5B01G161600 chr3B 92.133 966 51 11 1381 2327 823394480 823393521 0.000000e+00 1339
30 TraesCS5B01G161600 chr3B 87.662 154 15 4 9 158 541226385 541226232 3.550000e-40 176
31 TraesCS5B01G161600 chr6B 93.824 842 37 9 1381 2209 624696456 624695617 0.000000e+00 1253
32 TraesCS5B01G161600 chr6B 95.000 440 19 3 2315 2753 132046659 132046222 0.000000e+00 688
33 TraesCS5B01G161600 chr6B 86.585 246 33 0 1059 1304 637392017 637392262 4.400000e-69 272
34 TraesCS5B01G161600 chr7A 90.863 591 25 10 2315 2880 453712290 453711704 0.000000e+00 765
35 TraesCS5B01G161600 chr7A 88.756 418 21 7 2875 3290 453710165 453709772 4.010000e-134 488
36 TraesCS5B01G161600 chr7A 86.986 146 18 1 10 154 205277202 205277347 2.760000e-36 163
37 TraesCS5B01G161600 chr7A 91.579 95 8 0 3196 3290 114023081 114022987 7.790000e-27 132
38 TraesCS5B01G161600 chrUn 75.547 822 133 40 151 937 27092876 27092088 3.310000e-90 342
39 TraesCS5B01G161600 chr2D 74.939 826 134 44 150 934 584830404 584831197 9.330000e-81 311
40 TraesCS5B01G161600 chr7D 89.116 147 15 1 9 154 135448602 135448748 7.630000e-42 182
41 TraesCS5B01G161600 chr6A 87.821 156 16 3 1 154 199386707 199386861 2.740000e-41 180
42 TraesCS5B01G161600 chr4D 87.179 156 18 2 1 154 472221301 472221456 3.550000e-40 176
43 TraesCS5B01G161600 chr4A 88.514 148 14 3 9 154 225343411 225343265 3.550000e-40 176
44 TraesCS5B01G161600 chr4A 87.586 145 17 1 9 152 551124655 551124511 2.140000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G161600 chr5B 297983928 297987388 3460 True 6392.000000 6392 100.000000 1 3461 1 chr5B.!!$R3 3460
1 TraesCS5B01G161600 chr5B 14542721 14543232 511 True 767.000000 767 93.762000 2780 3290 1 chr5B.!!$R1 510
2 TraesCS5B01G161600 chr5B 14551904 14553347 1443 True 671.000000 673 93.194000 1860 2761 2 chr5B.!!$R4 901
3 TraesCS5B01G161600 chr5A 528606600 528609126 2526 False 903.666667 1421 92.206000 1382 3290 3 chr5A.!!$F2 1908
4 TraesCS5B01G161600 chr5A 326655009 326657633 2624 True 799.000000 1807 93.423667 960 3290 3 chr5A.!!$R1 2330
5 TraesCS5B01G161600 chr2B 53449156 53452094 2938 False 1102.333333 1463 91.630667 960 3290 3 chr2B.!!$F1 2330
6 TraesCS5B01G161600 chr2B 335379974 335382501 2527 True 1020.000000 1389 91.272500 1382 3290 2 chr2B.!!$R2 1908
7 TraesCS5B01G161600 chr2B 159887325 159888047 722 True 538.000000 538 81.004000 2315 3013 1 chr2B.!!$R1 698
8 TraesCS5B01G161600 chr7B 198979346 198981175 1829 False 990.000000 1435 94.415000 1381 2664 2 chr7B.!!$F2 1283
9 TraesCS5B01G161600 chr7B 198991498 198992129 631 False 695.000000 695 86.983000 2661 3290 1 chr7B.!!$F1 629
10 TraesCS5B01G161600 chr4B 220277616 220280072 2456 True 1353.000000 1435 92.179000 1381 3290 2 chr4B.!!$R1 1909
11 TraesCS5B01G161600 chr1B 19028082 19030610 2528 False 1019.000000 1393 91.230000 1382 3290 2 chr1B.!!$F1 1908
12 TraesCS5B01G161600 chr2A 733866216 733868716 2500 False 1013.500000 1382 91.125500 1382 3290 2 chr2A.!!$F1 1908
13 TraesCS5B01G161600 chr3B 823392000 823394480 2480 True 1357.500000 1376 92.181500 1381 3290 2 chr3B.!!$R2 1909
14 TraesCS5B01G161600 chr6B 624695617 624696456 839 True 1253.000000 1253 93.824000 1381 2209 1 chr6B.!!$R2 828
15 TraesCS5B01G161600 chr7A 453709772 453712290 2518 True 626.500000 765 89.809500 2315 3290 2 chr7A.!!$R2 975
16 TraesCS5B01G161600 chrUn 27092088 27092876 788 True 342.000000 342 75.547000 151 937 1 chrUn.!!$R1 786
17 TraesCS5B01G161600 chr2D 584830404 584831197 793 False 311.000000 311 74.939000 150 934 1 chr2D.!!$F1 784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.036010 CAGGTGGCAAACGAGGAGAT 60.036 55.0 0.0 0.0 0.00 2.75 F
758 803 0.036388 GAGGACAACGCCTGGATTCA 60.036 55.0 0.0 0.0 38.73 2.57 F
1033 1089 0.253160 ACCCTCCTTGCCCATGAGTA 60.253 55.0 0.0 0.0 0.00 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1315 1416 1.678123 GCAGCCTGCTCTCTGATTTCA 60.678 52.381 10.04 0.0 40.96 2.69 R
2266 2421 1.330521 GCACGAGAAACACAAGCAAGA 59.669 47.619 0.00 0.0 0.00 3.02 R
3020 5962 2.224281 TGTGTGCGTCTCAGAAAGGAAT 60.224 45.455 0.00 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.336138 AAAAAGACCCTAGAAGCCTCG 57.664 47.619 0.00 0.00 0.00 4.63
41 42 1.196012 AAAGACCCTAGAAGCCTCGG 58.804 55.000 0.00 0.00 0.00 4.63
43 44 1.076192 GACCCTAGAAGCCTCGGGA 60.076 63.158 8.77 0.00 45.73 5.14
44 45 1.075896 ACCCTAGAAGCCTCGGGAG 60.076 63.158 8.77 0.00 45.73 4.30
45 46 1.230497 CCCTAGAAGCCTCGGGAGA 59.770 63.158 0.00 0.00 45.73 3.71
46 47 0.397254 CCCTAGAAGCCTCGGGAGAA 60.397 60.000 0.00 0.00 45.73 2.87
47 48 1.036707 CCTAGAAGCCTCGGGAGAAG 58.963 60.000 0.00 0.00 39.18 2.85
48 49 1.410365 CCTAGAAGCCTCGGGAGAAGA 60.410 57.143 0.00 0.00 39.18 2.87
49 50 1.679153 CTAGAAGCCTCGGGAGAAGAC 59.321 57.143 0.00 0.00 39.18 3.01
50 51 0.973496 AGAAGCCTCGGGAGAAGACC 60.973 60.000 0.00 0.00 39.18 3.85
51 52 1.229209 AAGCCTCGGGAGAAGACCA 60.229 57.895 0.00 0.00 39.18 4.02
52 53 1.261238 AAGCCTCGGGAGAAGACCAG 61.261 60.000 0.00 0.00 39.18 4.00
53 54 2.726351 GCCTCGGGAGAAGACCAGG 61.726 68.421 0.00 0.00 39.18 4.45
54 55 1.305381 CCTCGGGAGAAGACCAGGT 60.305 63.158 0.00 0.00 39.18 4.00
55 56 1.608717 CCTCGGGAGAAGACCAGGTG 61.609 65.000 0.00 0.00 39.18 4.00
56 57 1.608717 CTCGGGAGAAGACCAGGTGG 61.609 65.000 0.00 0.00 39.18 4.61
57 58 2.671682 GGGAGAAGACCAGGTGGC 59.328 66.667 0.00 0.00 39.32 5.01
58 59 2.224159 GGGAGAAGACCAGGTGGCA 61.224 63.158 0.00 0.00 39.32 4.92
59 60 1.761174 GGAGAAGACCAGGTGGCAA 59.239 57.895 0.00 0.00 39.32 4.52
60 61 0.110486 GGAGAAGACCAGGTGGCAAA 59.890 55.000 0.00 0.00 39.32 3.68
61 62 1.239347 GAGAAGACCAGGTGGCAAAC 58.761 55.000 0.00 0.00 39.32 2.93
62 63 0.535102 AGAAGACCAGGTGGCAAACG 60.535 55.000 0.00 0.00 39.32 3.60
63 64 0.534203 GAAGACCAGGTGGCAAACGA 60.534 55.000 0.00 0.00 39.32 3.85
64 65 0.535102 AAGACCAGGTGGCAAACGAG 60.535 55.000 0.00 0.00 39.32 4.18
65 66 1.966451 GACCAGGTGGCAAACGAGG 60.966 63.158 0.00 0.00 39.32 4.63
66 67 2.391724 GACCAGGTGGCAAACGAGGA 62.392 60.000 0.00 0.00 39.32 3.71
67 68 1.672356 CCAGGTGGCAAACGAGGAG 60.672 63.158 0.00 0.00 0.00 3.69
68 69 1.371183 CAGGTGGCAAACGAGGAGA 59.629 57.895 0.00 0.00 0.00 3.71
69 70 0.036010 CAGGTGGCAAACGAGGAGAT 60.036 55.000 0.00 0.00 0.00 2.75
70 71 0.036010 AGGTGGCAAACGAGGAGATG 60.036 55.000 0.00 0.00 0.00 2.90
71 72 1.026718 GGTGGCAAACGAGGAGATGG 61.027 60.000 0.00 0.00 0.00 3.51
72 73 1.377202 TGGCAAACGAGGAGATGGC 60.377 57.895 0.00 0.00 36.73 4.40
73 74 1.377202 GGCAAACGAGGAGATGGCA 60.377 57.895 0.00 0.00 36.43 4.92
74 75 0.960364 GGCAAACGAGGAGATGGCAA 60.960 55.000 0.00 0.00 36.43 4.52
75 76 0.449388 GCAAACGAGGAGATGGCAAG 59.551 55.000 0.00 0.00 0.00 4.01
76 77 1.089920 CAAACGAGGAGATGGCAAGG 58.910 55.000 0.00 0.00 0.00 3.61
77 78 0.678048 AAACGAGGAGATGGCAAGGC 60.678 55.000 0.00 0.00 0.00 4.35
78 79 1.841302 AACGAGGAGATGGCAAGGCA 61.841 55.000 0.00 0.00 0.00 4.75
79 80 1.078214 CGAGGAGATGGCAAGGCAA 60.078 57.895 0.00 0.00 0.00 4.52
80 81 1.372087 CGAGGAGATGGCAAGGCAAC 61.372 60.000 0.00 0.00 0.00 4.17
81 82 0.322816 GAGGAGATGGCAAGGCAACA 60.323 55.000 0.00 0.00 41.41 3.33
82 83 0.323178 AGGAGATGGCAAGGCAACAG 60.323 55.000 0.00 0.00 41.41 3.16
83 84 1.318158 GGAGATGGCAAGGCAACAGG 61.318 60.000 0.00 0.00 41.41 4.00
84 85 1.304713 AGATGGCAAGGCAACAGGG 60.305 57.895 0.00 0.00 41.41 4.45
85 86 2.999063 ATGGCAAGGCAACAGGGC 60.999 61.111 0.00 0.00 43.80 5.19
86 87 4.536526 TGGCAAGGCAACAGGGCA 62.537 61.111 0.00 0.00 46.44 5.36
87 88 3.994853 GGCAAGGCAACAGGGCAC 61.995 66.667 0.00 0.00 46.44 5.01
88 89 4.347453 GCAAGGCAACAGGGCACG 62.347 66.667 0.00 0.00 46.44 5.34
89 90 4.347453 CAAGGCAACAGGGCACGC 62.347 66.667 0.00 0.00 46.44 5.34
100 101 2.033602 GGCACGCCCTGTTACCTT 59.966 61.111 0.00 0.00 0.00 3.50
101 102 2.332654 GGCACGCCCTGTTACCTTG 61.333 63.158 0.00 0.00 0.00 3.61
102 103 1.599797 GCACGCCCTGTTACCTTGT 60.600 57.895 0.00 0.00 0.00 3.16
103 104 1.852067 GCACGCCCTGTTACCTTGTG 61.852 60.000 0.00 0.00 0.00 3.33
104 105 1.072505 ACGCCCTGTTACCTTGTGG 59.927 57.895 0.00 0.00 39.83 4.17
105 106 1.674322 CGCCCTGTTACCTTGTGGG 60.674 63.158 0.00 0.00 40.74 4.61
106 107 4.415783 CCCTGTTACCTTGTGGGC 57.584 61.111 0.00 0.00 39.10 5.36
107 108 1.304134 CCCTGTTACCTTGTGGGCC 60.304 63.158 0.00 0.00 39.10 5.80
108 109 1.304134 CCTGTTACCTTGTGGGCCC 60.304 63.158 17.59 17.59 39.10 5.80
109 110 1.304134 CTGTTACCTTGTGGGCCCC 60.304 63.158 22.27 11.72 39.10 5.80
110 111 2.075355 CTGTTACCTTGTGGGCCCCA 62.075 60.000 22.27 14.62 39.10 4.96
123 124 3.408229 CCCCACATGGCTCTGTCT 58.592 61.111 0.00 0.00 0.00 3.41
124 125 1.077930 CCCCACATGGCTCTGTCTG 60.078 63.158 0.00 0.00 0.00 3.51
125 126 1.556373 CCCCACATGGCTCTGTCTGA 61.556 60.000 0.00 0.00 0.00 3.27
126 127 0.545171 CCCACATGGCTCTGTCTGAT 59.455 55.000 0.00 0.00 0.00 2.90
127 128 1.474677 CCCACATGGCTCTGTCTGATC 60.475 57.143 0.00 0.00 0.00 2.92
128 129 1.485480 CCACATGGCTCTGTCTGATCT 59.515 52.381 0.00 0.00 0.00 2.75
129 130 2.697229 CCACATGGCTCTGTCTGATCTA 59.303 50.000 0.00 0.00 0.00 1.98
130 131 3.133542 CCACATGGCTCTGTCTGATCTAA 59.866 47.826 0.00 0.00 0.00 2.10
131 132 4.202336 CCACATGGCTCTGTCTGATCTAAT 60.202 45.833 0.00 0.00 0.00 1.73
132 133 5.366460 CACATGGCTCTGTCTGATCTAATT 58.634 41.667 0.00 0.00 0.00 1.40
133 134 5.466058 CACATGGCTCTGTCTGATCTAATTC 59.534 44.000 0.00 0.00 0.00 2.17
134 135 4.679373 TGGCTCTGTCTGATCTAATTCC 57.321 45.455 0.00 0.00 0.00 3.01
135 136 4.033009 TGGCTCTGTCTGATCTAATTCCA 58.967 43.478 0.00 0.00 0.00 3.53
136 137 4.141846 TGGCTCTGTCTGATCTAATTCCAC 60.142 45.833 0.00 0.00 0.00 4.02
137 138 4.100808 GGCTCTGTCTGATCTAATTCCACT 59.899 45.833 0.00 0.00 0.00 4.00
138 139 5.396213 GGCTCTGTCTGATCTAATTCCACTT 60.396 44.000 0.00 0.00 0.00 3.16
139 140 5.752955 GCTCTGTCTGATCTAATTCCACTTC 59.247 44.000 0.00 0.00 0.00 3.01
140 141 6.406849 GCTCTGTCTGATCTAATTCCACTTCT 60.407 42.308 0.00 0.00 0.00 2.85
141 142 7.201866 GCTCTGTCTGATCTAATTCCACTTCTA 60.202 40.741 0.00 0.00 0.00 2.10
142 143 8.774546 TCTGTCTGATCTAATTCCACTTCTAT 57.225 34.615 0.00 0.00 0.00 1.98
143 144 9.868160 TCTGTCTGATCTAATTCCACTTCTATA 57.132 33.333 0.00 0.00 0.00 1.31
156 157 8.752005 TTCCACTTCTATAATTCTCAAATGGG 57.248 34.615 0.00 0.00 0.00 4.00
176 177 5.130350 TGGGACATATAAAACCAGCTAAGC 58.870 41.667 0.00 0.00 0.00 3.09
180 181 6.145696 GGACATATAAAACCAGCTAAGCTACG 59.854 42.308 0.00 0.00 36.40 3.51
208 215 2.753452 TCTAGCGAGAGATTTTCACCGT 59.247 45.455 0.00 0.00 0.00 4.83
211 218 1.428448 CGAGAGATTTTCACCGTGCA 58.572 50.000 0.00 0.00 0.00 4.57
212 219 1.391485 CGAGAGATTTTCACCGTGCAG 59.609 52.381 0.00 0.00 0.00 4.41
225 232 2.125552 TGCAGGCCGTTCGATCTG 60.126 61.111 0.00 9.13 0.00 2.90
231 238 0.808847 GGCCGTTCGATCTGGTTACC 60.809 60.000 0.00 0.00 0.00 2.85
239 246 1.398041 CGATCTGGTTACCGTCGTACA 59.602 52.381 13.04 0.00 0.00 2.90
240 247 2.032550 CGATCTGGTTACCGTCGTACAT 59.967 50.000 13.04 0.00 0.00 2.29
276 283 1.179152 TCGCTGGACCGTCAATTCTA 58.821 50.000 0.00 0.00 0.00 2.10
279 286 2.936498 CGCTGGACCGTCAATTCTATTT 59.064 45.455 0.00 0.00 0.00 1.40
289 296 6.264518 ACCGTCAATTCTATTTCACCTTTGTT 59.735 34.615 0.00 0.00 0.00 2.83
292 299 7.535258 CGTCAATTCTATTTCACCTTTGTTCTG 59.465 37.037 0.00 0.00 0.00 3.02
297 304 7.654022 TCTATTTCACCTTTGTTCTGGTTTT 57.346 32.000 0.00 0.00 33.75 2.43
299 306 9.191479 TCTATTTCACCTTTGTTCTGGTTTTAA 57.809 29.630 0.00 0.00 33.75 1.52
300 307 9.463443 CTATTTCACCTTTGTTCTGGTTTTAAG 57.537 33.333 0.00 0.00 33.75 1.85
315 322 5.251932 TGGTTTTAAGGGTGGATGACTGATA 59.748 40.000 0.00 0.00 0.00 2.15
321 328 1.771255 GGTGGATGACTGATAGGCCTT 59.229 52.381 12.58 0.00 0.00 4.35
326 333 4.101585 TGGATGACTGATAGGCCTTGTTAG 59.898 45.833 12.58 9.39 0.00 2.34
327 334 4.345257 GGATGACTGATAGGCCTTGTTAGA 59.655 45.833 12.58 0.00 0.00 2.10
338 345 2.554344 GCCTTGTTAGATGTGGGTCCAA 60.554 50.000 0.00 0.00 0.00 3.53
346 353 3.690460 AGATGTGGGTCCAAAGAATGAC 58.310 45.455 0.00 0.00 0.00 3.06
351 358 2.076863 GGGTCCAAAGAATGACGTGAG 58.923 52.381 0.00 0.00 0.00 3.51
366 373 2.097466 ACGTGAGTTGGCTCTTGTTTTG 59.903 45.455 0.00 0.00 46.40 2.44
367 374 2.541588 CGTGAGTTGGCTCTTGTTTTGG 60.542 50.000 0.00 0.00 42.13 3.28
371 378 3.826729 GAGTTGGCTCTTGTTTTGGGTAT 59.173 43.478 0.00 0.00 38.66 2.73
377 384 4.156739 GGCTCTTGTTTTGGGTATCTGAAG 59.843 45.833 0.00 0.00 0.00 3.02
380 387 6.092807 GCTCTTGTTTTGGGTATCTGAAGTAG 59.907 42.308 0.00 0.00 0.00 2.57
390 397 1.204146 TCTGAAGTAGGGGATGTGCC 58.796 55.000 0.00 0.00 0.00 5.01
391 398 0.911769 CTGAAGTAGGGGATGTGCCA 59.088 55.000 0.00 0.00 38.95 4.92
392 399 1.492176 CTGAAGTAGGGGATGTGCCAT 59.508 52.381 0.00 0.00 38.95 4.40
394 401 1.771255 GAAGTAGGGGATGTGCCATCT 59.229 52.381 12.89 0.00 38.95 2.90
396 403 0.839946 GTAGGGGATGTGCCATCTGT 59.160 55.000 12.89 3.72 38.95 3.41
414 421 2.811431 CTGTGCGGTGAAAACCTAATCA 59.189 45.455 0.00 0.00 0.00 2.57
423 430 6.002653 GTGAAAACCTAATCACCTATCCCT 57.997 41.667 0.00 0.00 40.00 4.20
443 450 4.227134 CCGTCCTCGAGCCCCATG 62.227 72.222 6.99 0.00 39.71 3.66
445 452 2.501610 GTCCTCGAGCCCCATGTC 59.498 66.667 6.99 0.00 0.00 3.06
450 457 3.411517 CGAGCCCCATGTCCCCTT 61.412 66.667 0.00 0.00 0.00 3.95
455 462 1.935931 CCCCATGTCCCCTTCCCTT 60.936 63.158 0.00 0.00 0.00 3.95
461 468 0.845102 TGTCCCCTTCCCTTCCCTTC 60.845 60.000 0.00 0.00 0.00 3.46
462 469 1.230182 TCCCCTTCCCTTCCCTTCC 60.230 63.158 0.00 0.00 0.00 3.46
464 471 1.923909 CCCTTCCCTTCCCTTCCGT 60.924 63.158 0.00 0.00 0.00 4.69
465 472 1.299976 CCTTCCCTTCCCTTCCGTG 59.700 63.158 0.00 0.00 0.00 4.94
467 474 0.321653 CTTCCCTTCCCTTCCGTGTG 60.322 60.000 0.00 0.00 0.00 3.82
468 475 2.359975 CCCTTCCCTTCCGTGTGC 60.360 66.667 0.00 0.00 0.00 4.57
469 476 2.429930 CCTTCCCTTCCGTGTGCA 59.570 61.111 0.00 0.00 0.00 4.57
519 528 2.159819 CTCCAGTCTCCACCACCACG 62.160 65.000 0.00 0.00 0.00 4.94
520 529 2.357517 CAGTCTCCACCACCACGC 60.358 66.667 0.00 0.00 0.00 5.34
538 554 3.804193 CGCCCCTTGCTTCGCTTC 61.804 66.667 0.00 0.00 38.05 3.86
587 603 1.600107 GCAGTGGTTACGGATGGGA 59.400 57.895 0.00 0.00 0.00 4.37
588 604 0.462047 GCAGTGGTTACGGATGGGAG 60.462 60.000 0.00 0.00 0.00 4.30
589 605 1.191535 CAGTGGTTACGGATGGGAGA 58.808 55.000 0.00 0.00 0.00 3.71
590 606 1.137086 CAGTGGTTACGGATGGGAGAG 59.863 57.143 0.00 0.00 0.00 3.20
591 607 0.179081 GTGGTTACGGATGGGAGAGC 60.179 60.000 0.00 0.00 0.00 4.09
592 608 0.616395 TGGTTACGGATGGGAGAGCA 60.616 55.000 0.00 0.00 0.00 4.26
593 609 0.759346 GGTTACGGATGGGAGAGCAT 59.241 55.000 0.00 0.00 0.00 3.79
594 610 1.541233 GGTTACGGATGGGAGAGCATG 60.541 57.143 0.00 0.00 0.00 4.06
595 611 0.758734 TTACGGATGGGAGAGCATGG 59.241 55.000 0.00 0.00 0.00 3.66
597 613 2.142761 CGGATGGGAGAGCATGGGA 61.143 63.158 0.00 0.00 0.00 4.37
598 614 1.759881 GGATGGGAGAGCATGGGAG 59.240 63.158 0.00 0.00 0.00 4.30
599 615 1.759881 GATGGGAGAGCATGGGAGG 59.240 63.158 0.00 0.00 0.00 4.30
600 616 1.773391 ATGGGAGAGCATGGGAGGG 60.773 63.158 0.00 0.00 0.00 4.30
603 619 2.509916 GAGAGCATGGGAGGGCAG 59.490 66.667 0.00 0.00 0.00 4.85
631 664 3.056458 CGTGGGTGTGTAGGAGCA 58.944 61.111 0.00 0.00 0.00 4.26
654 687 2.157640 AGAGGTGAGGAGGATGACAG 57.842 55.000 0.00 0.00 0.00 3.51
661 694 2.187946 GAGGATGACAGCGTGGGG 59.812 66.667 0.00 0.00 0.00 4.96
666 699 0.804989 GATGACAGCGTGGGGAAAAG 59.195 55.000 0.00 0.00 0.00 2.27
668 701 1.072505 GACAGCGTGGGGAAAAGGA 59.927 57.895 0.00 0.00 0.00 3.36
682 715 3.339141 GAAAAGGAAGCCAGATCGAAGT 58.661 45.455 0.00 0.00 0.00 3.01
758 803 0.036388 GAGGACAACGCCTGGATTCA 60.036 55.000 0.00 0.00 38.73 2.57
761 806 1.648467 GACAACGCCTGGATTCAGCC 61.648 60.000 0.00 0.00 39.61 4.85
762 807 2.044946 AACGCCTGGATTCAGCCC 60.045 61.111 0.00 0.00 39.61 5.19
763 808 3.645268 AACGCCTGGATTCAGCCCC 62.645 63.158 0.00 0.00 39.61 5.80
765 810 4.883354 GCCTGGATTCAGCCCCGG 62.883 72.222 0.00 0.00 39.61 5.73
766 811 4.883354 CCTGGATTCAGCCCCGGC 62.883 72.222 0.00 0.00 39.61 6.13
767 812 4.883354 CTGGATTCAGCCCCGGCC 62.883 72.222 1.02 0.00 43.17 6.13
790 835 4.227134 CCGGGCCTCGTGGATCTG 62.227 72.222 7.92 3.61 37.11 2.90
791 836 4.227134 CGGGCCTCGTGGATCTGG 62.227 72.222 7.92 0.00 34.57 3.86
792 837 4.554036 GGGCCTCGTGGATCTGGC 62.554 72.222 7.92 0.00 44.22 4.85
798 843 2.021068 CTCGTGGATCTGGCGATGGT 62.021 60.000 7.11 0.00 34.04 3.55
852 897 2.510238 GGTGCTGCTCGTGCTAGG 60.510 66.667 11.19 2.60 40.48 3.02
855 900 4.498520 GCTGCTCGTGCTAGGCGA 62.499 66.667 11.19 0.00 40.48 5.54
856 901 2.580867 CTGCTCGTGCTAGGCGAC 60.581 66.667 11.19 0.00 40.48 5.19
857 902 4.476410 TGCTCGTGCTAGGCGACG 62.476 66.667 11.19 0.00 40.48 5.12
872 928 1.671379 GACGGTTCAAGGTGAGGCC 60.671 63.158 0.00 0.00 37.58 5.19
911 967 2.287915 CAGTTTCTCCCGTGAGTTTGTG 59.712 50.000 0.00 0.00 39.75 3.33
912 968 1.002792 GTTTCTCCCGTGAGTTTGTGC 60.003 52.381 0.00 0.00 39.75 4.57
918 974 2.875933 TCCCGTGAGTTTGTGCTAAAAG 59.124 45.455 0.00 0.00 0.00 2.27
919 975 2.616842 CCCGTGAGTTTGTGCTAAAAGT 59.383 45.455 0.00 0.00 0.00 2.66
934 990 8.988934 TGTGCTAAAAGTATGAGTTCTTGTTAG 58.011 33.333 0.00 0.00 0.00 2.34
937 993 7.606839 GCTAAAAGTATGAGTTCTTGTTAGGGT 59.393 37.037 0.00 0.00 0.00 4.34
940 996 6.793505 AGTATGAGTTCTTGTTAGGGTAGG 57.206 41.667 0.00 0.00 0.00 3.18
941 997 5.661759 AGTATGAGTTCTTGTTAGGGTAGGG 59.338 44.000 0.00 0.00 0.00 3.53
942 998 3.865571 TGAGTTCTTGTTAGGGTAGGGT 58.134 45.455 0.00 0.00 0.00 4.34
943 999 5.014534 TGAGTTCTTGTTAGGGTAGGGTA 57.985 43.478 0.00 0.00 0.00 3.69
944 1000 5.021458 TGAGTTCTTGTTAGGGTAGGGTAG 58.979 45.833 0.00 0.00 0.00 3.18
945 1001 3.773667 AGTTCTTGTTAGGGTAGGGTAGC 59.226 47.826 0.00 0.00 0.00 3.58
946 1002 3.478175 TCTTGTTAGGGTAGGGTAGCA 57.522 47.619 0.00 0.00 0.00 3.49
947 1003 3.371965 TCTTGTTAGGGTAGGGTAGCAG 58.628 50.000 0.00 0.00 0.00 4.24
948 1004 2.934263 TGTTAGGGTAGGGTAGCAGT 57.066 50.000 0.00 0.00 0.00 4.40
949 1005 4.017222 TCTTGTTAGGGTAGGGTAGCAGTA 60.017 45.833 0.00 0.00 0.00 2.74
950 1006 3.635591 TGTTAGGGTAGGGTAGCAGTAC 58.364 50.000 0.00 0.00 0.00 2.73
951 1007 3.270433 TGTTAGGGTAGGGTAGCAGTACT 59.730 47.826 0.00 0.00 0.00 2.73
952 1008 2.752075 AGGGTAGGGTAGCAGTACTC 57.248 55.000 0.00 0.00 0.00 2.59
953 1009 2.215987 AGGGTAGGGTAGCAGTACTCT 58.784 52.381 0.00 1.23 43.01 3.24
954 1010 2.175284 AGGGTAGGGTAGCAGTACTCTC 59.825 54.545 0.00 0.00 39.42 3.20
955 1011 2.175284 GGGTAGGGTAGCAGTACTCTCT 59.825 54.545 0.00 0.00 39.42 3.10
956 1012 3.372892 GGGTAGGGTAGCAGTACTCTCTT 60.373 52.174 0.00 0.00 39.42 2.85
957 1013 3.633065 GGTAGGGTAGCAGTACTCTCTTG 59.367 52.174 0.00 0.00 39.42 3.02
958 1014 2.741145 AGGGTAGCAGTACTCTCTTGG 58.259 52.381 0.00 0.00 34.58 3.61
972 1028 1.133809 TCTTGGTTGTAGCTGGGCCT 61.134 55.000 4.53 0.00 0.00 5.19
1033 1089 0.253160 ACCCTCCTTGCCCATGAGTA 60.253 55.000 0.00 0.00 0.00 2.59
1056 1112 0.447801 GCAACAACAGCAGATACCGG 59.552 55.000 0.00 0.00 0.00 5.28
1057 1113 1.808411 CAACAACAGCAGATACCGGT 58.192 50.000 13.98 13.98 0.00 5.28
1120 1192 5.390885 CCAATCTTGATTTACAGACCGTGTG 60.391 44.000 0.00 0.00 40.69 3.82
1154 1226 8.447924 AGTTCAGGTGATTATCAATTGATCTG 57.552 34.615 23.95 21.13 36.05 2.90
1166 1238 5.384336 TCAATTGATCTGAAACCAACCTCA 58.616 37.500 3.38 0.00 0.00 3.86
1185 1257 5.010516 ACCTCAGTACATGCATATCTCTGAC 59.989 44.000 0.00 0.00 0.00 3.51
1202 1274 4.060900 TCTGACTTGAGAAGAATGCACAC 58.939 43.478 0.00 0.00 0.00 3.82
1204 1276 4.198530 TGACTTGAGAAGAATGCACACAA 58.801 39.130 0.00 0.00 0.00 3.33
1290 1391 7.177498 TGTCTGAATAAAGCGCATATGTTAG 57.823 36.000 11.47 7.55 0.00 2.34
1294 1395 7.596621 TCTGAATAAAGCGCATATGTTAGAGAG 59.403 37.037 11.47 0.00 0.00 3.20
1304 1405 7.467267 GCGCATATGTTAGAGAGGAATTGAAAA 60.467 37.037 0.30 0.00 0.00 2.29
1305 1406 7.852945 CGCATATGTTAGAGAGGAATTGAAAAC 59.147 37.037 4.29 0.00 0.00 2.43
1306 1407 8.677300 GCATATGTTAGAGAGGAATTGAAAACA 58.323 33.333 4.29 0.00 0.00 2.83
1374 1492 9.640963 CCATTAATAGTAGCTGTCATAGGTAAC 57.359 37.037 0.00 0.00 40.78 2.50
1386 1504 8.983724 GCTGTCATAGGTAACAGAAATAGAATC 58.016 37.037 6.69 0.00 44.54 2.52
1448 1566 6.670027 AGAGTGTATTTTCTCCATACCTCACT 59.330 38.462 0.00 0.00 32.41 3.41
1495 1613 4.518249 TGTTATGGACAACACACTTGACA 58.482 39.130 0.00 0.00 34.69 3.58
1505 1623 4.222124 ACACACTTGACAACCTCTCTTT 57.778 40.909 0.00 0.00 0.00 2.52
1640 1759 1.135944 GCGAAACTGAAGCTTGCTACC 60.136 52.381 2.10 0.00 0.00 3.18
1791 1914 8.743085 ATCACAACAACAAGCTCATATCTTAT 57.257 30.769 0.00 0.00 0.00 1.73
2091 2240 0.404040 ATCACCCTTCTTTTCCGCCA 59.596 50.000 0.00 0.00 0.00 5.69
2124 2273 4.354943 ACCCCAGGCCTAGCAGGT 62.355 66.667 3.98 7.20 37.80 4.00
2130 2279 1.701847 CCAGGCCTAGCAGGTGATAAT 59.298 52.381 3.98 0.00 37.80 1.28
2137 2286 2.896801 GCAGGTGATAATGGCGCCG 61.897 63.158 23.90 3.85 40.77 6.46
2232 2387 1.277273 CTCAGACTGGCTCCATTGACA 59.723 52.381 1.81 0.00 0.00 3.58
2266 2421 2.627515 TCTTCTTGTGCAGCTTCACT 57.372 45.000 17.42 0.00 37.81 3.41
2278 2433 2.357009 CAGCTTCACTCTTGCTTGTGTT 59.643 45.455 0.00 0.00 34.51 3.32
2282 2437 4.787882 GCTTCACTCTTGCTTGTGTTTCTC 60.788 45.833 0.00 0.00 35.82 2.87
2283 2438 2.866156 TCACTCTTGCTTGTGTTTCTCG 59.134 45.455 0.00 0.00 35.82 4.04
2337 3568 3.274288 CTCTGCTTTAGATGGGTGAACC 58.726 50.000 0.00 0.00 40.81 3.62
2366 3597 4.402155 CCCATCTTTTATTGCTTGCAGGTA 59.598 41.667 0.00 0.00 0.00 3.08
2542 3775 9.209048 TCCTTTCTTATAGTATTACTTGAGGCA 57.791 33.333 0.85 0.00 0.00 4.75
2611 3891 1.206878 ATCATGCTACACAGAGGCCA 58.793 50.000 5.01 0.00 0.00 5.36
2807 4203 9.767228 TGTACTAGAATGCTTACTGTGTTTTAA 57.233 29.630 0.00 0.00 0.00 1.52
2967 5909 5.634896 CCTTACACTTCTGTGATTCATTGC 58.365 41.667 3.03 0.00 46.55 3.56
2993 5935 7.010183 CCGAAATGTATCTCGATGTAGTTTTGT 59.990 37.037 0.00 0.00 37.23 2.83
3005 5947 6.538742 CGATGTAGTTTTGTCTGTATTGGGAT 59.461 38.462 0.00 0.00 0.00 3.85
3020 5962 7.358263 TGTATTGGGATTGGGATTTAAGCTTA 58.642 34.615 0.86 0.86 0.00 3.09
3038 5981 3.062774 GCTTATTCCTTTCTGAGACGCAC 59.937 47.826 0.00 0.00 0.00 5.34
3224 6187 9.638176 AATTCCTCTATTTTGATTGCTCATAGT 57.362 29.630 0.00 0.00 0.00 2.12
3271 6234 9.202273 GTTTAGGTATCTAAGAATGCTGATGAG 57.798 37.037 0.00 0.00 36.87 2.90
3276 6239 8.144478 GGTATCTAAGAATGCTGATGAGTACAA 58.856 37.037 0.00 0.00 0.00 2.41
3279 6242 7.785033 TCTAAGAATGCTGATGAGTACAATCA 58.215 34.615 9.98 9.98 0.00 2.57
3290 6253 3.194062 GAGTACAATCAGAGCAAGCCTC 58.806 50.000 0.00 0.00 41.07 4.70
3291 6254 2.568956 AGTACAATCAGAGCAAGCCTCA 59.431 45.455 0.00 0.00 43.31 3.86
3292 6255 2.110901 ACAATCAGAGCAAGCCTCAG 57.889 50.000 0.00 0.00 43.31 3.35
3293 6256 0.733729 CAATCAGAGCAAGCCTCAGC 59.266 55.000 0.00 0.00 43.31 4.26
3310 6273 6.568869 GCCTCAGCTTGTACTATATCTATGG 58.431 44.000 0.00 0.00 35.50 2.74
3311 6274 6.406400 GCCTCAGCTTGTACTATATCTATGGG 60.406 46.154 0.00 0.00 35.50 4.00
3312 6275 6.406400 CCTCAGCTTGTACTATATCTATGGGC 60.406 46.154 0.00 0.00 0.00 5.36
3313 6276 6.256819 TCAGCTTGTACTATATCTATGGGCT 58.743 40.000 0.00 0.00 0.00 5.19
3314 6277 6.726299 TCAGCTTGTACTATATCTATGGGCTT 59.274 38.462 0.00 0.00 0.00 4.35
3315 6278 7.893833 TCAGCTTGTACTATATCTATGGGCTTA 59.106 37.037 0.00 0.00 0.00 3.09
3316 6279 8.700051 CAGCTTGTACTATATCTATGGGCTTAT 58.300 37.037 0.00 0.00 0.00 1.73
3317 6280 8.700051 AGCTTGTACTATATCTATGGGCTTATG 58.300 37.037 0.00 0.00 0.00 1.90
3318 6281 7.439655 GCTTGTACTATATCTATGGGCTTATGC 59.560 40.741 0.00 0.00 38.76 3.14
3319 6282 7.971368 TGTACTATATCTATGGGCTTATGCA 57.029 36.000 2.72 0.00 41.91 3.96
3320 6283 8.374184 TGTACTATATCTATGGGCTTATGCAA 57.626 34.615 2.72 0.00 41.91 4.08
3321 6284 8.258007 TGTACTATATCTATGGGCTTATGCAAC 58.742 37.037 2.72 0.00 41.91 4.17
3322 6285 7.502060 ACTATATCTATGGGCTTATGCAACT 57.498 36.000 2.72 0.00 41.91 3.16
3323 6286 7.334090 ACTATATCTATGGGCTTATGCAACTG 58.666 38.462 2.72 0.00 41.91 3.16
3324 6287 2.575532 TCTATGGGCTTATGCAACTGC 58.424 47.619 2.72 0.00 41.91 4.40
3325 6288 1.265095 CTATGGGCTTATGCAACTGCG 59.735 52.381 2.72 0.00 45.83 5.18
3326 6289 1.386525 ATGGGCTTATGCAACTGCGG 61.387 55.000 2.72 0.00 45.83 5.69
3327 6290 2.102946 GGCTTATGCAACTGCGGC 59.897 61.111 2.72 0.00 45.83 6.53
3328 6291 2.102946 GCTTATGCAACTGCGGCC 59.897 61.111 0.00 0.00 45.83 6.13
3329 6292 2.409870 GCTTATGCAACTGCGGCCT 61.410 57.895 0.00 0.00 45.83 5.19
3330 6293 1.095228 GCTTATGCAACTGCGGCCTA 61.095 55.000 0.00 0.00 45.83 3.93
3331 6294 1.597742 CTTATGCAACTGCGGCCTAT 58.402 50.000 0.00 0.00 45.83 2.57
3332 6295 1.265095 CTTATGCAACTGCGGCCTATG 59.735 52.381 0.00 0.00 45.83 2.23
3333 6296 1.165907 TATGCAACTGCGGCCTATGC 61.166 55.000 0.00 12.27 45.83 3.14
3334 6297 3.133464 GCAACTGCGGCCTATGCA 61.133 61.111 13.73 1.65 40.13 3.96
3339 6302 3.398310 TGCGGCCTATGCAGGTGA 61.398 61.111 0.00 0.00 44.68 4.02
3340 6303 2.124736 GCGGCCTATGCAGGTGAA 60.125 61.111 0.00 0.00 44.68 3.18
3341 6304 2.472909 GCGGCCTATGCAGGTGAAC 61.473 63.158 0.00 0.00 44.68 3.18
3342 6305 1.078497 CGGCCTATGCAGGTGAACA 60.078 57.895 0.00 0.00 44.68 3.18
3343 6306 0.676466 CGGCCTATGCAGGTGAACAA 60.676 55.000 0.00 0.00 44.68 2.83
3344 6307 1.767759 GGCCTATGCAGGTGAACAAT 58.232 50.000 0.00 0.00 44.68 2.71
3345 6308 2.744823 CGGCCTATGCAGGTGAACAATA 60.745 50.000 0.00 0.00 44.68 1.90
3346 6309 2.618709 GGCCTATGCAGGTGAACAATAC 59.381 50.000 0.00 0.00 44.68 1.89
3347 6310 3.278574 GCCTATGCAGGTGAACAATACA 58.721 45.455 0.00 0.00 44.68 2.29
3348 6311 3.694072 GCCTATGCAGGTGAACAATACAA 59.306 43.478 0.00 0.00 44.68 2.41
3349 6312 4.157656 GCCTATGCAGGTGAACAATACAAA 59.842 41.667 0.00 0.00 44.68 2.83
3350 6313 5.677091 GCCTATGCAGGTGAACAATACAAAG 60.677 44.000 0.00 0.00 44.68 2.77
3351 6314 3.641437 TGCAGGTGAACAATACAAAGC 57.359 42.857 0.00 0.00 0.00 3.51
3352 6315 3.221771 TGCAGGTGAACAATACAAAGCT 58.778 40.909 0.00 0.00 0.00 3.74
3353 6316 3.004629 TGCAGGTGAACAATACAAAGCTG 59.995 43.478 0.00 0.00 38.93 4.24
3354 6317 3.253188 GCAGGTGAACAATACAAAGCTGA 59.747 43.478 4.49 0.00 38.35 4.26
3355 6318 4.082571 GCAGGTGAACAATACAAAGCTGAT 60.083 41.667 4.49 0.00 38.35 2.90
3356 6319 5.123820 GCAGGTGAACAATACAAAGCTGATA 59.876 40.000 4.49 0.00 38.35 2.15
3357 6320 6.546395 CAGGTGAACAATACAAAGCTGATAC 58.454 40.000 0.00 0.00 38.35 2.24
3358 6321 6.149308 CAGGTGAACAATACAAAGCTGATACA 59.851 38.462 0.00 0.00 38.35 2.29
3359 6322 6.714810 AGGTGAACAATACAAAGCTGATACAA 59.285 34.615 0.00 0.00 0.00 2.41
3360 6323 7.023575 GGTGAACAATACAAAGCTGATACAAG 58.976 38.462 0.00 0.00 0.00 3.16
3361 6324 7.023575 GTGAACAATACAAAGCTGATACAAGG 58.976 38.462 0.00 0.00 0.00 3.61
3362 6325 6.714810 TGAACAATACAAAGCTGATACAAGGT 59.285 34.615 0.00 0.00 0.00 3.50
3363 6326 7.230510 TGAACAATACAAAGCTGATACAAGGTT 59.769 33.333 0.00 0.00 39.50 3.50
3364 6327 6.913170 ACAATACAAAGCTGATACAAGGTTG 58.087 36.000 0.00 0.00 37.91 3.77
3365 6328 6.071952 ACAATACAAAGCTGATACAAGGTTGG 60.072 38.462 0.00 0.00 37.91 3.77
3366 6329 3.832527 ACAAAGCTGATACAAGGTTGGT 58.167 40.909 0.00 0.00 37.07 3.67
3367 6330 3.569701 ACAAAGCTGATACAAGGTTGGTG 59.430 43.478 0.00 0.00 39.71 4.17
3368 6331 3.788227 AAGCTGATACAAGGTTGGTGA 57.212 42.857 0.00 0.00 36.56 4.02
3369 6332 4.307032 AAGCTGATACAAGGTTGGTGAT 57.693 40.909 0.00 0.00 36.56 3.06
3370 6333 4.307032 AGCTGATACAAGGTTGGTGATT 57.693 40.909 0.00 0.00 0.00 2.57
3371 6334 4.666512 AGCTGATACAAGGTTGGTGATTT 58.333 39.130 0.00 0.00 0.00 2.17
3372 6335 5.815581 AGCTGATACAAGGTTGGTGATTTA 58.184 37.500 0.00 0.00 0.00 1.40
3373 6336 6.245408 AGCTGATACAAGGTTGGTGATTTAA 58.755 36.000 0.00 0.00 0.00 1.52
3374 6337 6.891908 AGCTGATACAAGGTTGGTGATTTAAT 59.108 34.615 0.00 0.00 0.00 1.40
3375 6338 8.052748 AGCTGATACAAGGTTGGTGATTTAATA 58.947 33.333 0.00 0.00 0.00 0.98
3376 6339 8.850156 GCTGATACAAGGTTGGTGATTTAATAT 58.150 33.333 0.00 0.00 0.00 1.28
3386 6349 9.533253 GGTTGGTGATTTAATATTGATTCAAGG 57.467 33.333 5.21 0.00 0.00 3.61
3387 6350 9.034544 GTTGGTGATTTAATATTGATTCAAGGC 57.965 33.333 5.21 0.00 0.00 4.35
3388 6351 8.303780 TGGTGATTTAATATTGATTCAAGGCA 57.696 30.769 5.21 0.00 0.00 4.75
3389 6352 8.756927 TGGTGATTTAATATTGATTCAAGGCAA 58.243 29.630 5.21 0.00 0.00 4.52
3390 6353 9.034544 GGTGATTTAATATTGATTCAAGGCAAC 57.965 33.333 5.21 0.00 0.00 4.17
3391 6354 9.585099 GTGATTTAATATTGATTCAAGGCAACA 57.415 29.630 5.21 0.00 41.41 3.33
3394 6357 8.945481 TTTAATATTGATTCAAGGCAACATGG 57.055 30.769 5.21 0.00 35.55 3.66
3395 6358 6.549433 AATATTGATTCAAGGCAACATGGT 57.451 33.333 5.21 0.00 35.55 3.55
3396 6359 3.940209 TTGATTCAAGGCAACATGGTC 57.060 42.857 0.00 0.00 35.55 4.02
3397 6360 3.159213 TGATTCAAGGCAACATGGTCT 57.841 42.857 0.00 0.00 35.55 3.85
3398 6361 4.299586 TGATTCAAGGCAACATGGTCTA 57.700 40.909 0.00 0.00 35.55 2.59
3399 6362 4.009675 TGATTCAAGGCAACATGGTCTAC 58.990 43.478 0.00 0.00 35.55 2.59
3400 6363 3.788227 TTCAAGGCAACATGGTCTACT 57.212 42.857 0.00 0.00 35.55 2.57
3401 6364 4.901197 TTCAAGGCAACATGGTCTACTA 57.099 40.909 0.00 0.00 35.55 1.82
3402 6365 5.435686 TTCAAGGCAACATGGTCTACTAT 57.564 39.130 0.00 0.00 35.55 2.12
3403 6366 4.769688 TCAAGGCAACATGGTCTACTATG 58.230 43.478 5.05 5.05 40.20 2.23
3404 6367 3.845781 AGGCAACATGGTCTACTATGG 57.154 47.619 10.67 0.00 38.89 2.74
3405 6368 3.115390 AGGCAACATGGTCTACTATGGT 58.885 45.455 10.67 1.46 38.89 3.55
3406 6369 3.523564 AGGCAACATGGTCTACTATGGTT 59.476 43.478 10.67 1.40 38.89 3.67
3407 6370 3.627577 GGCAACATGGTCTACTATGGTTG 59.372 47.826 10.67 11.91 38.89 3.77
3408 6371 4.261801 GCAACATGGTCTACTATGGTTGT 58.738 43.478 10.67 0.00 38.89 3.32
3409 6372 4.700213 GCAACATGGTCTACTATGGTTGTT 59.300 41.667 10.67 0.00 38.89 2.83
3410 6373 5.391950 GCAACATGGTCTACTATGGTTGTTG 60.392 44.000 14.41 14.41 43.28 3.33
3411 6374 4.261801 ACATGGTCTACTATGGTTGTTGC 58.738 43.478 10.67 0.00 38.89 4.17
3412 6375 2.967362 TGGTCTACTATGGTTGTTGCG 58.033 47.619 0.00 0.00 0.00 4.85
3413 6376 1.664151 GGTCTACTATGGTTGTTGCGC 59.336 52.381 0.00 0.00 0.00 6.09
3414 6377 2.618053 GTCTACTATGGTTGTTGCGCT 58.382 47.619 9.73 0.00 0.00 5.92
3415 6378 3.000727 GTCTACTATGGTTGTTGCGCTT 58.999 45.455 9.73 0.00 0.00 4.68
3416 6379 3.062234 GTCTACTATGGTTGTTGCGCTTC 59.938 47.826 9.73 1.72 0.00 3.86
3417 6380 1.165270 ACTATGGTTGTTGCGCTTCC 58.835 50.000 9.73 4.49 0.00 3.46
3418 6381 1.164411 CTATGGTTGTTGCGCTTCCA 58.836 50.000 9.73 10.29 0.00 3.53
3419 6382 1.745087 CTATGGTTGTTGCGCTTCCAT 59.255 47.619 9.73 16.34 41.10 3.41
3420 6383 0.244450 ATGGTTGTTGCGCTTCCATG 59.756 50.000 9.73 0.00 37.48 3.66
3421 6384 1.106351 TGGTTGTTGCGCTTCCATGT 61.106 50.000 9.73 0.00 0.00 3.21
3422 6385 0.664166 GGTTGTTGCGCTTCCATGTG 60.664 55.000 9.73 0.00 0.00 3.21
3423 6386 0.310543 GTTGTTGCGCTTCCATGTGA 59.689 50.000 9.73 0.00 0.00 3.58
3424 6387 1.068333 GTTGTTGCGCTTCCATGTGAT 60.068 47.619 9.73 0.00 0.00 3.06
3425 6388 0.804364 TGTTGCGCTTCCATGTGATC 59.196 50.000 9.73 0.00 0.00 2.92
3426 6389 0.804364 GTTGCGCTTCCATGTGATCA 59.196 50.000 9.73 0.00 0.00 2.92
3427 6390 1.402968 GTTGCGCTTCCATGTGATCAT 59.597 47.619 9.73 0.00 34.21 2.45
3428 6391 1.302366 TGCGCTTCCATGTGATCATC 58.698 50.000 9.73 0.00 31.15 2.92
3429 6392 1.134310 TGCGCTTCCATGTGATCATCT 60.134 47.619 9.73 0.00 31.15 2.90
3430 6393 1.945394 GCGCTTCCATGTGATCATCTT 59.055 47.619 0.00 0.00 31.15 2.40
3431 6394 2.032204 GCGCTTCCATGTGATCATCTTC 60.032 50.000 0.00 0.00 31.15 2.87
3432 6395 2.547211 CGCTTCCATGTGATCATCTTCC 59.453 50.000 0.00 0.00 31.15 3.46
3433 6396 3.548770 GCTTCCATGTGATCATCTTCCA 58.451 45.455 0.00 0.00 31.15 3.53
3434 6397 3.949754 GCTTCCATGTGATCATCTTCCAA 59.050 43.478 0.00 0.00 31.15 3.53
3435 6398 4.400251 GCTTCCATGTGATCATCTTCCAAA 59.600 41.667 0.00 0.00 31.15 3.28
3436 6399 5.068723 GCTTCCATGTGATCATCTTCCAAAT 59.931 40.000 0.00 0.00 31.15 2.32
3437 6400 6.406624 GCTTCCATGTGATCATCTTCCAAATT 60.407 38.462 0.00 0.00 31.15 1.82
3438 6401 7.201848 GCTTCCATGTGATCATCTTCCAAATTA 60.202 37.037 0.00 0.00 31.15 1.40
3439 6402 7.572523 TCCATGTGATCATCTTCCAAATTAC 57.427 36.000 0.00 0.00 31.15 1.89
3440 6403 6.260714 TCCATGTGATCATCTTCCAAATTACG 59.739 38.462 0.00 0.00 31.15 3.18
3441 6404 6.038603 CCATGTGATCATCTTCCAAATTACGT 59.961 38.462 0.00 0.00 31.15 3.57
3442 6405 6.421377 TGTGATCATCTTCCAAATTACGTG 57.579 37.500 0.00 0.00 0.00 4.49
3443 6406 5.937540 TGTGATCATCTTCCAAATTACGTGT 59.062 36.000 0.00 0.00 0.00 4.49
3444 6407 6.429692 TGTGATCATCTTCCAAATTACGTGTT 59.570 34.615 0.00 0.00 0.00 3.32
3445 6408 7.040755 TGTGATCATCTTCCAAATTACGTGTTT 60.041 33.333 0.00 0.00 0.00 2.83
3446 6409 7.481798 GTGATCATCTTCCAAATTACGTGTTTC 59.518 37.037 0.00 0.00 0.00 2.78
3447 6410 7.390440 TGATCATCTTCCAAATTACGTGTTTCT 59.610 33.333 0.00 0.00 0.00 2.52
3448 6411 7.504924 TCATCTTCCAAATTACGTGTTTCTT 57.495 32.000 0.00 0.00 0.00 2.52
3449 6412 7.581476 TCATCTTCCAAATTACGTGTTTCTTC 58.419 34.615 0.00 0.00 0.00 2.87
3450 6413 6.928979 TCTTCCAAATTACGTGTTTCTTCA 57.071 33.333 0.00 0.00 0.00 3.02
3451 6414 6.954944 TCTTCCAAATTACGTGTTTCTTCAG 58.045 36.000 0.00 0.00 0.00 3.02
3452 6415 5.682943 TCCAAATTACGTGTTTCTTCAGG 57.317 39.130 0.00 0.00 0.00 3.86
3453 6416 5.127491 TCCAAATTACGTGTTTCTTCAGGT 58.873 37.500 0.00 0.00 39.29 4.00
3454 6417 5.591067 TCCAAATTACGTGTTTCTTCAGGTT 59.409 36.000 0.00 0.00 37.55 3.50
3455 6418 6.766944 TCCAAATTACGTGTTTCTTCAGGTTA 59.233 34.615 0.00 0.00 37.55 2.85
3456 6419 7.282675 TCCAAATTACGTGTTTCTTCAGGTTAA 59.717 33.333 0.00 0.00 37.55 2.01
3457 6420 7.377662 CCAAATTACGTGTTTCTTCAGGTTAAC 59.622 37.037 0.00 0.00 37.55 2.01
3458 6421 5.989551 TTACGTGTTTCTTCAGGTTAACC 57.010 39.130 17.41 17.41 37.55 2.85
3459 6422 3.876341 ACGTGTTTCTTCAGGTTAACCA 58.124 40.909 26.26 3.80 38.89 3.67
3460 6423 4.457466 ACGTGTTTCTTCAGGTTAACCAT 58.543 39.130 26.26 8.95 38.89 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.027100 CCGAGGCTTCTAGGGTCTTTTT 60.027 50.000 0.00 0.00 30.76 1.94
21 22 1.555533 CCGAGGCTTCTAGGGTCTTTT 59.444 52.381 0.00 0.00 30.76 2.27
22 23 1.196012 CCGAGGCTTCTAGGGTCTTT 58.804 55.000 0.00 0.00 30.76 2.52
23 24 0.688087 CCCGAGGCTTCTAGGGTCTT 60.688 60.000 9.30 0.00 45.15 3.01
24 25 1.075896 CCCGAGGCTTCTAGGGTCT 60.076 63.158 9.30 0.00 45.15 3.85
25 26 3.539842 CCCGAGGCTTCTAGGGTC 58.460 66.667 9.30 0.00 45.15 4.46
28 29 1.036707 CTTCTCCCGAGGCTTCTAGG 58.963 60.000 0.00 0.00 33.69 3.02
29 30 1.679153 GTCTTCTCCCGAGGCTTCTAG 59.321 57.143 0.00 0.00 0.00 2.43
30 31 1.685491 GGTCTTCTCCCGAGGCTTCTA 60.685 57.143 0.00 0.00 0.00 2.10
31 32 0.973496 GGTCTTCTCCCGAGGCTTCT 60.973 60.000 0.00 0.00 0.00 2.85
32 33 1.258445 TGGTCTTCTCCCGAGGCTTC 61.258 60.000 0.00 0.00 0.00 3.86
33 34 1.229209 TGGTCTTCTCCCGAGGCTT 60.229 57.895 0.00 0.00 0.00 4.35
34 35 1.684049 CTGGTCTTCTCCCGAGGCT 60.684 63.158 0.00 0.00 0.00 4.58
35 36 2.726351 CCTGGTCTTCTCCCGAGGC 61.726 68.421 0.00 0.00 0.00 4.70
36 37 1.305381 ACCTGGTCTTCTCCCGAGG 60.305 63.158 0.00 0.00 0.00 4.63
37 38 1.608717 CCACCTGGTCTTCTCCCGAG 61.609 65.000 0.00 0.00 0.00 4.63
38 39 1.609501 CCACCTGGTCTTCTCCCGA 60.610 63.158 0.00 0.00 0.00 5.14
39 40 2.982130 CCACCTGGTCTTCTCCCG 59.018 66.667 0.00 0.00 0.00 5.14
40 41 1.779061 TTGCCACCTGGTCTTCTCCC 61.779 60.000 0.00 0.00 37.57 4.30
41 42 0.110486 TTTGCCACCTGGTCTTCTCC 59.890 55.000 0.00 0.00 37.57 3.71
42 43 1.239347 GTTTGCCACCTGGTCTTCTC 58.761 55.000 0.00 0.00 37.57 2.87
43 44 0.535102 CGTTTGCCACCTGGTCTTCT 60.535 55.000 0.00 0.00 37.57 2.85
44 45 0.534203 TCGTTTGCCACCTGGTCTTC 60.534 55.000 0.00 0.00 37.57 2.87
45 46 0.535102 CTCGTTTGCCACCTGGTCTT 60.535 55.000 0.00 0.00 37.57 3.01
46 47 1.071471 CTCGTTTGCCACCTGGTCT 59.929 57.895 0.00 0.00 37.57 3.85
47 48 1.966451 CCTCGTTTGCCACCTGGTC 60.966 63.158 0.00 0.00 37.57 4.02
48 49 2.113139 CCTCGTTTGCCACCTGGT 59.887 61.111 0.00 0.00 37.57 4.00
49 50 1.672356 CTCCTCGTTTGCCACCTGG 60.672 63.158 0.00 0.00 38.53 4.45
50 51 0.036010 ATCTCCTCGTTTGCCACCTG 60.036 55.000 0.00 0.00 0.00 4.00
51 52 0.036010 CATCTCCTCGTTTGCCACCT 60.036 55.000 0.00 0.00 0.00 4.00
52 53 1.026718 CCATCTCCTCGTTTGCCACC 61.027 60.000 0.00 0.00 0.00 4.61
53 54 1.648467 GCCATCTCCTCGTTTGCCAC 61.648 60.000 0.00 0.00 0.00 5.01
54 55 1.377202 GCCATCTCCTCGTTTGCCA 60.377 57.895 0.00 0.00 0.00 4.92
55 56 0.960364 TTGCCATCTCCTCGTTTGCC 60.960 55.000 0.00 0.00 0.00 4.52
56 57 0.449388 CTTGCCATCTCCTCGTTTGC 59.551 55.000 0.00 0.00 0.00 3.68
57 58 1.089920 CCTTGCCATCTCCTCGTTTG 58.910 55.000 0.00 0.00 0.00 2.93
58 59 0.678048 GCCTTGCCATCTCCTCGTTT 60.678 55.000 0.00 0.00 0.00 3.60
59 60 1.078143 GCCTTGCCATCTCCTCGTT 60.078 57.895 0.00 0.00 0.00 3.85
60 61 1.841302 TTGCCTTGCCATCTCCTCGT 61.841 55.000 0.00 0.00 0.00 4.18
61 62 1.078214 TTGCCTTGCCATCTCCTCG 60.078 57.895 0.00 0.00 0.00 4.63
62 63 0.322816 TGTTGCCTTGCCATCTCCTC 60.323 55.000 0.00 0.00 0.00 3.71
63 64 0.323178 CTGTTGCCTTGCCATCTCCT 60.323 55.000 0.00 0.00 0.00 3.69
64 65 1.318158 CCTGTTGCCTTGCCATCTCC 61.318 60.000 0.00 0.00 0.00 3.71
65 66 1.318158 CCCTGTTGCCTTGCCATCTC 61.318 60.000 0.00 0.00 0.00 2.75
66 67 1.304713 CCCTGTTGCCTTGCCATCT 60.305 57.895 0.00 0.00 0.00 2.90
67 68 3.010413 GCCCTGTTGCCTTGCCATC 62.010 63.158 0.00 0.00 0.00 3.51
68 69 2.999063 GCCCTGTTGCCTTGCCAT 60.999 61.111 0.00 0.00 0.00 4.40
69 70 4.536526 TGCCCTGTTGCCTTGCCA 62.537 61.111 0.00 0.00 0.00 4.92
70 71 3.994853 GTGCCCTGTTGCCTTGCC 61.995 66.667 0.00 0.00 0.00 4.52
71 72 4.347453 CGTGCCCTGTTGCCTTGC 62.347 66.667 0.00 0.00 0.00 4.01
72 73 4.347453 GCGTGCCCTGTTGCCTTG 62.347 66.667 0.00 0.00 0.00 3.61
83 84 2.033602 AAGGTAACAGGGCGTGCC 59.966 61.111 7.17 1.16 41.41 5.01
84 85 1.599797 ACAAGGTAACAGGGCGTGC 60.600 57.895 7.17 0.00 41.41 5.34
85 86 1.234615 CCACAAGGTAACAGGGCGTG 61.235 60.000 5.50 5.50 41.41 5.34
86 87 1.072505 CCACAAGGTAACAGGGCGT 59.927 57.895 0.00 0.00 41.41 5.68
87 88 1.674322 CCCACAAGGTAACAGGGCG 60.674 63.158 0.00 0.00 41.41 6.13
88 89 4.415783 CCCACAAGGTAACAGGGC 57.584 61.111 0.00 0.00 41.41 5.19
89 90 1.304134 GGCCCACAAGGTAACAGGG 60.304 63.158 0.00 0.00 42.55 4.45
90 91 1.304134 GGGCCCACAAGGTAACAGG 60.304 63.158 19.95 0.00 38.26 4.00
91 92 1.304134 GGGGCCCACAAGGTAACAG 60.304 63.158 26.86 0.00 38.26 3.16
92 93 2.085562 TGGGGCCCACAAGGTAACA 61.086 57.895 24.76 5.69 38.26 2.41
93 94 2.848032 TGGGGCCCACAAGGTAAC 59.152 61.111 24.76 2.47 38.26 2.50
106 107 1.077930 CAGACAGAGCCATGTGGGG 60.078 63.158 0.54 0.00 37.04 4.96
107 108 0.545171 ATCAGACAGAGCCATGTGGG 59.455 55.000 0.54 0.00 40.85 4.61
108 109 1.485480 AGATCAGACAGAGCCATGTGG 59.515 52.381 0.00 0.00 32.25 4.17
109 110 2.983907 AGATCAGACAGAGCCATGTG 57.016 50.000 0.00 0.00 32.25 3.21
110 111 5.454471 GGAATTAGATCAGACAGAGCCATGT 60.454 44.000 0.00 0.00 35.68 3.21
111 112 4.996122 GGAATTAGATCAGACAGAGCCATG 59.004 45.833 0.00 0.00 31.44 3.66
112 113 4.657504 TGGAATTAGATCAGACAGAGCCAT 59.342 41.667 0.00 0.00 31.44 4.40
113 114 4.033009 TGGAATTAGATCAGACAGAGCCA 58.967 43.478 0.00 0.00 31.44 4.75
114 115 4.100808 AGTGGAATTAGATCAGACAGAGCC 59.899 45.833 0.00 0.00 31.44 4.70
115 116 5.275067 AGTGGAATTAGATCAGACAGAGC 57.725 43.478 0.00 0.00 0.00 4.09
116 117 7.111247 AGAAGTGGAATTAGATCAGACAGAG 57.889 40.000 0.00 0.00 0.00 3.35
117 118 8.774546 ATAGAAGTGGAATTAGATCAGACAGA 57.225 34.615 0.00 0.00 0.00 3.41
130 131 9.359653 CCCATTTGAGAATTATAGAAGTGGAAT 57.640 33.333 7.18 0.00 0.00 3.01
131 132 8.556589 TCCCATTTGAGAATTATAGAAGTGGAA 58.443 33.333 7.18 0.00 0.00 3.53
132 133 7.993183 GTCCCATTTGAGAATTATAGAAGTGGA 59.007 37.037 7.18 0.00 0.00 4.02
133 134 7.775093 TGTCCCATTTGAGAATTATAGAAGTGG 59.225 37.037 0.00 0.00 0.00 4.00
134 135 8.737168 TGTCCCATTTGAGAATTATAGAAGTG 57.263 34.615 0.00 0.00 0.00 3.16
143 144 9.265862 TGGTTTTATATGTCCCATTTGAGAATT 57.734 29.630 0.00 0.00 0.00 2.17
144 145 8.837099 TGGTTTTATATGTCCCATTTGAGAAT 57.163 30.769 0.00 0.00 0.00 2.40
145 146 7.147915 GCTGGTTTTATATGTCCCATTTGAGAA 60.148 37.037 0.00 0.00 0.00 2.87
146 147 6.321181 GCTGGTTTTATATGTCCCATTTGAGA 59.679 38.462 0.00 0.00 0.00 3.27
147 148 6.322201 AGCTGGTTTTATATGTCCCATTTGAG 59.678 38.462 0.00 0.00 0.00 3.02
148 149 6.194235 AGCTGGTTTTATATGTCCCATTTGA 58.806 36.000 0.00 0.00 0.00 2.69
149 150 6.469782 AGCTGGTTTTATATGTCCCATTTG 57.530 37.500 0.00 0.00 0.00 2.32
150 151 7.201911 GCTTAGCTGGTTTTATATGTCCCATTT 60.202 37.037 0.00 0.00 0.00 2.32
151 152 6.265422 GCTTAGCTGGTTTTATATGTCCCATT 59.735 38.462 0.00 0.00 0.00 3.16
152 153 5.770162 GCTTAGCTGGTTTTATATGTCCCAT 59.230 40.000 0.00 0.00 0.00 4.00
153 154 5.104109 AGCTTAGCTGGTTTTATATGTCCCA 60.104 40.000 5.70 0.00 37.57 4.37
154 155 5.377478 AGCTTAGCTGGTTTTATATGTCCC 58.623 41.667 5.70 0.00 37.57 4.46
155 156 6.145696 CGTAGCTTAGCTGGTTTTATATGTCC 59.854 42.308 17.97 0.00 40.10 4.02
156 157 7.106663 CGTAGCTTAGCTGGTTTTATATGTC 57.893 40.000 17.97 0.00 40.10 3.06
194 195 1.813513 CCTGCACGGTGAAAATCTCT 58.186 50.000 13.29 0.00 0.00 3.10
195 196 0.169009 GCCTGCACGGTGAAAATCTC 59.831 55.000 13.29 0.00 34.25 2.75
196 197 1.244019 GGCCTGCACGGTGAAAATCT 61.244 55.000 13.29 0.00 34.25 2.40
208 215 2.125552 CAGATCGAACGGCCTGCA 60.126 61.111 0.00 0.00 0.00 4.41
211 218 0.175073 GTAACCAGATCGAACGGCCT 59.825 55.000 0.00 0.00 0.00 5.19
212 219 0.808847 GGTAACCAGATCGAACGGCC 60.809 60.000 0.00 0.00 0.00 6.13
253 260 0.036388 ATTGACGGTCCAGCGATTGT 60.036 50.000 5.55 0.00 0.00 2.71
255 262 1.066143 AGAATTGACGGTCCAGCGATT 60.066 47.619 5.55 0.00 0.00 3.34
276 283 7.272244 CCTTAAAACCAGAACAAAGGTGAAAT 58.728 34.615 0.00 0.00 38.37 2.17
279 286 4.647399 CCCTTAAAACCAGAACAAAGGTGA 59.353 41.667 0.00 0.00 38.37 4.02
289 296 3.655777 AGTCATCCACCCTTAAAACCAGA 59.344 43.478 0.00 0.00 0.00 3.86
292 299 4.028993 TCAGTCATCCACCCTTAAAACC 57.971 45.455 0.00 0.00 0.00 3.27
297 304 2.972713 GCCTATCAGTCATCCACCCTTA 59.027 50.000 0.00 0.00 0.00 2.69
299 306 1.428869 GCCTATCAGTCATCCACCCT 58.571 55.000 0.00 0.00 0.00 4.34
300 307 0.398318 GGCCTATCAGTCATCCACCC 59.602 60.000 0.00 0.00 0.00 4.61
315 322 1.282157 GACCCACATCTAACAAGGCCT 59.718 52.381 0.00 0.00 0.00 5.19
321 328 4.715534 TTCTTTGGACCCACATCTAACA 57.284 40.909 0.00 0.00 0.00 2.41
326 333 2.420022 CGTCATTCTTTGGACCCACATC 59.580 50.000 0.00 0.00 0.00 3.06
327 334 2.224769 ACGTCATTCTTTGGACCCACAT 60.225 45.455 0.00 0.00 0.00 3.21
338 345 2.037772 AGAGCCAACTCACGTCATTCTT 59.962 45.455 0.00 0.00 46.09 2.52
346 353 2.541588 CCAAAACAAGAGCCAACTCACG 60.542 50.000 0.00 0.00 46.09 4.35
351 358 3.826729 AGATACCCAAAACAAGAGCCAAC 59.173 43.478 0.00 0.00 0.00 3.77
354 361 3.686016 TCAGATACCCAAAACAAGAGCC 58.314 45.455 0.00 0.00 0.00 4.70
355 362 4.762251 ACTTCAGATACCCAAAACAAGAGC 59.238 41.667 0.00 0.00 0.00 4.09
360 367 4.018779 CCCCTACTTCAGATACCCAAAACA 60.019 45.833 0.00 0.00 0.00 2.83
366 373 3.325135 CACATCCCCTACTTCAGATACCC 59.675 52.174 0.00 0.00 0.00 3.69
367 374 3.244249 GCACATCCCCTACTTCAGATACC 60.244 52.174 0.00 0.00 0.00 2.73
371 378 1.204146 GGCACATCCCCTACTTCAGA 58.796 55.000 0.00 0.00 0.00 3.27
390 397 3.773117 GGTTTTCACCGCACAGATG 57.227 52.632 0.00 0.00 31.60 2.90
414 421 2.446036 GGACGGGCAGGGATAGGT 60.446 66.667 0.00 0.00 0.00 3.08
417 424 2.520982 CGAGGACGGGCAGGGATA 60.521 66.667 0.00 0.00 35.72 2.59
442 449 0.845102 GAAGGGAAGGGAAGGGGACA 60.845 60.000 0.00 0.00 0.00 4.02
443 450 1.572689 GGAAGGGAAGGGAAGGGGAC 61.573 65.000 0.00 0.00 0.00 4.46
445 452 2.680370 CGGAAGGGAAGGGAAGGGG 61.680 68.421 0.00 0.00 0.00 4.79
450 457 2.890766 GCACACGGAAGGGAAGGGA 61.891 63.158 0.00 0.00 38.45 4.20
455 462 4.308458 CGGTGCACACGGAAGGGA 62.308 66.667 20.43 0.00 38.45 4.20
485 494 3.883549 GAGAGCATGGGAGGGGGC 61.884 72.222 0.00 0.00 0.00 5.80
486 495 3.174265 GGAGAGCATGGGAGGGGG 61.174 72.222 0.00 0.00 0.00 5.40
487 496 2.367377 TGGAGAGCATGGGAGGGG 60.367 66.667 0.00 0.00 0.00 4.79
488 497 1.692042 ACTGGAGAGCATGGGAGGG 60.692 63.158 0.00 0.00 0.00 4.30
489 498 0.690411 AGACTGGAGAGCATGGGAGG 60.690 60.000 0.00 0.00 0.00 4.30
490 499 0.752054 GAGACTGGAGAGCATGGGAG 59.248 60.000 0.00 0.00 0.00 4.30
491 500 0.689080 GGAGACTGGAGAGCATGGGA 60.689 60.000 0.00 0.00 0.00 4.37
492 501 0.979709 TGGAGACTGGAGAGCATGGG 60.980 60.000 0.00 0.00 0.00 4.00
495 504 0.252421 TGGTGGAGACTGGAGAGCAT 60.252 55.000 0.00 0.00 0.00 3.79
499 508 0.832135 GTGGTGGTGGAGACTGGAGA 60.832 60.000 0.00 0.00 0.00 3.71
538 554 1.745232 CCGGATCGAGAGGAGGATAG 58.255 60.000 0.00 0.00 0.00 2.08
561 577 1.501741 GTAACCACTGCGTGCATGG 59.498 57.895 8.27 16.57 39.57 3.66
562 578 1.132436 CGTAACCACTGCGTGCATG 59.868 57.895 0.09 0.09 31.34 4.06
563 579 2.032634 CCGTAACCACTGCGTGCAT 61.033 57.895 0.00 0.00 31.34 3.96
564 580 2.443260 ATCCGTAACCACTGCGTGCA 62.443 55.000 0.00 0.00 31.34 4.57
565 581 1.740296 ATCCGTAACCACTGCGTGC 60.740 57.895 3.56 0.00 31.34 5.34
569 585 0.462047 CTCCCATCCGTAACCACTGC 60.462 60.000 0.00 0.00 0.00 4.40
579 595 2.109517 CTCCCATGCTCTCCCATCCG 62.110 65.000 0.00 0.00 0.00 4.18
587 603 3.095163 CCTGCCCTCCCATGCTCT 61.095 66.667 0.00 0.00 0.00 4.09
588 604 4.201122 CCCTGCCCTCCCATGCTC 62.201 72.222 0.00 0.00 0.00 4.26
609 625 1.667830 CCTACACACCCACGCTGTG 60.668 63.158 1.76 1.76 43.99 3.66
610 626 1.816863 CTCCTACACACCCACGCTGT 61.817 60.000 0.00 0.00 0.00 4.40
624 657 1.342474 CCTCACCTCTTCCTGCTCCTA 60.342 57.143 0.00 0.00 0.00 2.94
631 664 1.648568 TCATCCTCCTCACCTCTTCCT 59.351 52.381 0.00 0.00 0.00 3.36
654 687 2.636412 GGCTTCCTTTTCCCCACGC 61.636 63.158 0.00 0.00 0.00 5.34
661 694 3.339141 ACTTCGATCTGGCTTCCTTTTC 58.661 45.455 0.00 0.00 0.00 2.29
666 699 2.545731 GAGAACTTCGATCTGGCTTCC 58.454 52.381 0.00 0.00 0.00 3.46
705 738 2.179517 GACGTCCCTCGACTGCAG 59.820 66.667 13.48 13.48 42.86 4.41
708 741 2.742710 TTTGCGACGTCCCTCGACTG 62.743 60.000 10.58 0.00 42.86 3.51
712 745 1.886861 CTTGTTTGCGACGTCCCTCG 61.887 60.000 10.58 0.00 46.00 4.63
723 768 1.301677 CCTCCTCCTCGCTTGTTTGC 61.302 60.000 0.00 0.00 0.00 3.68
726 771 0.832135 TGTCCTCCTCCTCGCTTGTT 60.832 55.000 0.00 0.00 0.00 2.83
738 783 0.744771 GAATCCAGGCGTTGTCCTCC 60.745 60.000 0.00 0.00 33.25 4.30
773 818 4.227134 CAGATCCACGAGGCCCGG 62.227 72.222 16.44 0.00 43.93 5.73
774 819 4.227134 CCAGATCCACGAGGCCCG 62.227 72.222 11.48 11.48 45.44 6.13
775 820 4.554036 GCCAGATCCACGAGGCCC 62.554 72.222 0.00 0.00 38.16 5.80
776 821 4.899239 CGCCAGATCCACGAGGCC 62.899 72.222 0.00 0.00 39.93 5.19
777 822 3.157217 ATCGCCAGATCCACGAGGC 62.157 63.158 8.11 0.00 39.48 4.70
778 823 1.300465 CATCGCCAGATCCACGAGG 60.300 63.158 8.11 4.60 39.48 4.63
779 824 1.300465 CCATCGCCAGATCCACGAG 60.300 63.158 8.11 0.00 39.48 4.18
780 825 0.753848 TACCATCGCCAGATCCACGA 60.754 55.000 4.99 4.99 40.53 4.35
781 826 0.318441 ATACCATCGCCAGATCCACG 59.682 55.000 0.00 0.00 34.23 4.94
782 827 1.670087 CGATACCATCGCCAGATCCAC 60.670 57.143 0.00 0.00 46.55 4.02
783 828 0.603065 CGATACCATCGCCAGATCCA 59.397 55.000 0.00 0.00 46.55 3.41
784 829 3.425578 CGATACCATCGCCAGATCC 57.574 57.895 0.00 0.00 46.55 3.36
798 843 1.823295 GCCCAAGCCTCTCACGATA 59.177 57.895 0.00 0.00 0.00 2.92
811 856 4.667935 TCCGGGAAGGAGGCCCAA 62.668 66.667 0.00 0.00 45.98 4.12
839 884 2.580867 GTCGCCTAGCACGAGCAG 60.581 66.667 7.77 2.63 45.49 4.24
840 885 4.476410 CGTCGCCTAGCACGAGCA 62.476 66.667 7.77 0.00 45.49 4.26
843 888 3.332493 GAACCGTCGCCTAGCACGA 62.332 63.158 11.33 5.51 36.03 4.35
845 890 1.352156 CTTGAACCGTCGCCTAGCAC 61.352 60.000 0.00 0.00 0.00 4.40
848 893 0.736325 CACCTTGAACCGTCGCCTAG 60.736 60.000 0.00 0.00 0.00 3.02
849 894 1.180456 TCACCTTGAACCGTCGCCTA 61.180 55.000 0.00 0.00 0.00 3.93
850 895 2.030562 CACCTTGAACCGTCGCCT 59.969 61.111 0.00 0.00 0.00 5.52
852 897 2.027625 CCTCACCTTGAACCGTCGC 61.028 63.158 0.00 0.00 0.00 5.19
855 900 2.430367 GGCCTCACCTTGAACCGT 59.570 61.111 0.00 0.00 34.51 4.83
856 901 2.359975 GGGCCTCACCTTGAACCG 60.360 66.667 0.84 0.00 39.10 4.44
857 902 2.035783 GGGGCCTCACCTTGAACC 59.964 66.667 0.84 0.00 39.10 3.62
872 928 0.399091 TGGATGTGGCTAGAGGAGGG 60.399 60.000 0.00 0.00 0.00 4.30
911 967 7.606839 ACCCTAACAAGAACTCATACTTTTAGC 59.393 37.037 0.00 0.00 0.00 3.09
918 974 5.424573 ACCCTACCCTAACAAGAACTCATAC 59.575 44.000 0.00 0.00 0.00 2.39
919 975 5.596763 ACCCTACCCTAACAAGAACTCATA 58.403 41.667 0.00 0.00 0.00 2.15
934 990 2.175284 AGAGAGTACTGCTACCCTACCC 59.825 54.545 0.00 0.00 0.00 3.69
937 993 3.268856 ACCAAGAGAGTACTGCTACCCTA 59.731 47.826 0.00 0.00 0.00 3.53
938 994 2.043252 ACCAAGAGAGTACTGCTACCCT 59.957 50.000 0.00 0.00 0.00 4.34
939 995 2.458620 ACCAAGAGAGTACTGCTACCC 58.541 52.381 0.00 0.00 0.00 3.69
940 996 3.258622 ACAACCAAGAGAGTACTGCTACC 59.741 47.826 0.00 0.00 0.00 3.18
941 997 4.522722 ACAACCAAGAGAGTACTGCTAC 57.477 45.455 0.00 0.00 0.00 3.58
942 998 4.158025 GCTACAACCAAGAGAGTACTGCTA 59.842 45.833 0.00 0.00 0.00 3.49
943 999 3.056465 GCTACAACCAAGAGAGTACTGCT 60.056 47.826 0.00 0.00 0.00 4.24
944 1000 3.056465 AGCTACAACCAAGAGAGTACTGC 60.056 47.826 0.00 0.00 0.00 4.40
945 1001 4.489810 CAGCTACAACCAAGAGAGTACTG 58.510 47.826 0.00 0.00 0.00 2.74
946 1002 3.511934 CCAGCTACAACCAAGAGAGTACT 59.488 47.826 0.00 0.00 0.00 2.73
947 1003 3.368531 CCCAGCTACAACCAAGAGAGTAC 60.369 52.174 0.00 0.00 0.00 2.73
948 1004 2.832129 CCCAGCTACAACCAAGAGAGTA 59.168 50.000 0.00 0.00 0.00 2.59
949 1005 1.625818 CCCAGCTACAACCAAGAGAGT 59.374 52.381 0.00 0.00 0.00 3.24
950 1006 1.677217 GCCCAGCTACAACCAAGAGAG 60.677 57.143 0.00 0.00 0.00 3.20
951 1007 0.324943 GCCCAGCTACAACCAAGAGA 59.675 55.000 0.00 0.00 0.00 3.10
952 1008 0.678048 GGCCCAGCTACAACCAAGAG 60.678 60.000 0.00 0.00 0.00 2.85
953 1009 1.133809 AGGCCCAGCTACAACCAAGA 61.134 55.000 0.00 0.00 0.00 3.02
954 1010 0.251341 AAGGCCCAGCTACAACCAAG 60.251 55.000 0.00 0.00 0.00 3.61
955 1011 0.251165 GAAGGCCCAGCTACAACCAA 60.251 55.000 0.00 0.00 0.00 3.67
956 1012 1.378762 GAAGGCCCAGCTACAACCA 59.621 57.895 0.00 0.00 0.00 3.67
957 1013 0.251165 TTGAAGGCCCAGCTACAACC 60.251 55.000 0.00 0.00 0.00 3.77
958 1014 0.881796 GTTGAAGGCCCAGCTACAAC 59.118 55.000 0.00 3.92 33.01 3.32
972 1028 1.303236 CCATGTCTGGCCGGTTGAA 60.303 57.895 12.43 0.00 35.23 2.69
1052 1108 6.534475 TTGTGTAGTATTTATCTGACCGGT 57.466 37.500 6.92 6.92 0.00 5.28
1053 1109 7.709182 TGATTTGTGTAGTATTTATCTGACCGG 59.291 37.037 0.00 0.00 0.00 5.28
1054 1110 8.642908 TGATTTGTGTAGTATTTATCTGACCG 57.357 34.615 0.00 0.00 0.00 4.79
1083 1155 3.953612 TCAAGATTGGGAACATACCATGC 59.046 43.478 0.00 0.00 42.32 4.06
1120 1192 7.265673 TGATAATCACCTGAACTAACTACAGC 58.734 38.462 0.00 0.00 0.00 4.40
1154 1226 3.146066 TGCATGTACTGAGGTTGGTTTC 58.854 45.455 0.00 0.00 0.00 2.78
1166 1238 6.548993 TCTCAAGTCAGAGATATGCATGTACT 59.451 38.462 10.16 5.64 39.62 2.73
1185 1257 4.556942 TGTTGTGTGCATTCTTCTCAAG 57.443 40.909 0.00 0.00 0.00 3.02
1202 1274 5.771469 TCATCAATGGTGCTTAAGTTGTTG 58.229 37.500 4.02 6.03 0.00 3.33
1204 1276 5.316167 TCTCATCAATGGTGCTTAAGTTGT 58.684 37.500 4.02 0.00 0.00 3.32
1304 1405 8.169977 TGCTCTCTGATTTCAAAGTAAAATGT 57.830 30.769 0.00 0.00 0.00 2.71
1305 1406 7.754027 CCTGCTCTCTGATTTCAAAGTAAAATG 59.246 37.037 0.00 0.00 0.00 2.32
1306 1407 7.576477 GCCTGCTCTCTGATTTCAAAGTAAAAT 60.576 37.037 0.00 0.00 0.00 1.82
1307 1408 6.294176 GCCTGCTCTCTGATTTCAAAGTAAAA 60.294 38.462 0.00 0.00 0.00 1.52
1309 1410 4.697352 GCCTGCTCTCTGATTTCAAAGTAA 59.303 41.667 0.00 0.00 0.00 2.24
1310 1411 4.019860 AGCCTGCTCTCTGATTTCAAAGTA 60.020 41.667 0.00 0.00 0.00 2.24
1315 1416 1.678123 GCAGCCTGCTCTCTGATTTCA 60.678 52.381 10.04 0.00 40.96 2.69
1397 1515 2.228822 GGAACACAAGCAGGTTGGTATG 59.771 50.000 16.62 8.36 40.90 2.39
1472 1590 4.944317 TGTCAAGTGTGTTGTCCATAACAA 59.056 37.500 0.00 0.00 45.60 2.83
1477 1595 2.687935 GGTTGTCAAGTGTGTTGTCCAT 59.312 45.455 0.00 0.00 0.00 3.41
1495 1613 5.010012 CAGTTTTGTGCCATAAAGAGAGGTT 59.990 40.000 0.00 0.00 0.00 3.50
1505 1623 4.930963 CACAGTTTCAGTTTTGTGCCATA 58.069 39.130 0.00 0.00 35.11 2.74
1581 1700 8.414003 GGGATTTGTATATCTATGCGACTATGA 58.586 37.037 0.00 0.00 0.00 2.15
1640 1759 7.672983 AATGTTTATGACTGGTCTTACACAG 57.327 36.000 15.52 0.00 35.13 3.66
1791 1914 9.659135 ATGGATAATCACCAATCAGGAAATTTA 57.341 29.630 0.00 0.00 40.93 1.40
1796 1919 7.976414 AAAATGGATAATCACCAATCAGGAA 57.024 32.000 0.00 0.00 40.93 3.36
1890 2016 9.598517 GATGGAATGAGAGGACAAATATATCTC 57.401 37.037 0.00 0.00 37.50 2.75
1892 2019 9.902684 ATGATGGAATGAGAGGACAAATATATC 57.097 33.333 0.00 0.00 0.00 1.63
1901 2028 5.033589 ACTGAATGATGGAATGAGAGGAC 57.966 43.478 0.00 0.00 0.00 3.85
2037 2164 8.540492 GGACGACTTAATATTAATATGCCATCG 58.460 37.037 20.10 20.10 0.00 3.84
2055 2182 3.596066 ATGCTGCAGCGGACGACTT 62.596 57.895 32.11 7.68 45.83 3.01
2124 2273 2.661537 CTCGCGGCGCCATTATCA 60.662 61.111 28.98 2.02 0.00 2.15
2232 2387 6.629291 GCACAAGAAGATACCTTAGAGAAGCT 60.629 42.308 0.00 0.00 31.62 3.74
2266 2421 1.330521 GCACGAGAAACACAAGCAAGA 59.669 47.619 0.00 0.00 0.00 3.02
2337 3568 6.873076 TGCAAGCAATAAAAGATGGGTTAAAG 59.127 34.615 0.00 0.00 0.00 1.85
2366 3597 3.769300 GCCAAGAGGAACCCAACAAATAT 59.231 43.478 0.00 0.00 36.89 1.28
2578 3811 9.100197 TGTGTAGCATGATAAGGAATAAGGATA 57.900 33.333 0.00 0.00 0.00 2.59
2579 3812 7.977818 TGTGTAGCATGATAAGGAATAAGGAT 58.022 34.615 0.00 0.00 0.00 3.24
2580 3813 7.290014 TCTGTGTAGCATGATAAGGAATAAGGA 59.710 37.037 0.00 0.00 0.00 3.36
2581 3814 7.445121 TCTGTGTAGCATGATAAGGAATAAGG 58.555 38.462 0.00 0.00 0.00 2.69
2582 3815 7.601886 CCTCTGTGTAGCATGATAAGGAATAAG 59.398 40.741 0.00 0.00 0.00 1.73
2611 3891 3.874392 GCACCTGAATGCAAACCTAAT 57.126 42.857 0.00 0.00 45.39 1.73
2761 4128 5.835113 ACAAAGTTGTGCTCTTACATTGT 57.165 34.783 0.00 0.00 40.49 2.71
2967 5909 7.010183 ACAAAACTACATCGAGATACATTTCGG 59.990 37.037 2.76 0.00 37.42 4.30
2993 5935 5.833131 GCTTAAATCCCAATCCCAATACAGA 59.167 40.000 0.00 0.00 0.00 3.41
3005 5947 7.893302 TCAGAAAGGAATAAGCTTAAATCCCAA 59.107 33.333 26.32 11.51 0.00 4.12
3020 5962 2.224281 TGTGTGCGTCTCAGAAAGGAAT 60.224 45.455 0.00 0.00 0.00 3.01
3207 6170 7.934855 AGAACAGACTATGAGCAATCAAAAT 57.065 32.000 0.00 0.00 0.00 1.82
3242 6205 8.948631 TCAGCATTCTTAGATACCTAAACAAG 57.051 34.615 0.00 0.00 34.71 3.16
3271 6234 2.935201 CTGAGGCTTGCTCTGATTGTAC 59.065 50.000 0.00 0.00 0.00 2.90
3276 6239 4.959399 GCTGAGGCTTGCTCTGAT 57.041 55.556 6.25 0.00 35.22 2.90
3290 6253 6.537453 AGCCCATAGATATAGTACAAGCTG 57.463 41.667 0.00 0.00 0.00 4.24
3291 6254 8.700051 CATAAGCCCATAGATATAGTACAAGCT 58.300 37.037 0.00 0.00 0.00 3.74
3292 6255 7.439655 GCATAAGCCCATAGATATAGTACAAGC 59.560 40.741 0.00 0.00 33.58 4.01
3293 6256 8.478066 TGCATAAGCCCATAGATATAGTACAAG 58.522 37.037 0.00 0.00 41.13 3.16
3294 6257 8.374184 TGCATAAGCCCATAGATATAGTACAA 57.626 34.615 0.00 0.00 41.13 2.41
3295 6258 7.971368 TGCATAAGCCCATAGATATAGTACA 57.029 36.000 0.00 0.00 41.13 2.90
3296 6259 8.478877 AGTTGCATAAGCCCATAGATATAGTAC 58.521 37.037 0.00 0.00 41.13 2.73
3297 6260 8.478066 CAGTTGCATAAGCCCATAGATATAGTA 58.522 37.037 0.00 0.00 41.13 1.82
3298 6261 7.334090 CAGTTGCATAAGCCCATAGATATAGT 58.666 38.462 0.00 0.00 41.13 2.12
3299 6262 6.259608 GCAGTTGCATAAGCCCATAGATATAG 59.740 42.308 0.00 0.00 41.13 1.31
3300 6263 6.115446 GCAGTTGCATAAGCCCATAGATATA 58.885 40.000 0.00 0.00 41.13 0.86
3301 6264 4.946157 GCAGTTGCATAAGCCCATAGATAT 59.054 41.667 0.00 0.00 41.13 1.63
3302 6265 4.326826 GCAGTTGCATAAGCCCATAGATA 58.673 43.478 0.00 0.00 41.13 1.98
3303 6266 3.152341 GCAGTTGCATAAGCCCATAGAT 58.848 45.455 0.00 0.00 41.13 1.98
3304 6267 2.575532 GCAGTTGCATAAGCCCATAGA 58.424 47.619 0.00 0.00 41.13 1.98
3305 6268 1.265095 CGCAGTTGCATAAGCCCATAG 59.735 52.381 4.84 0.00 42.21 2.23
3306 6269 1.308047 CGCAGTTGCATAAGCCCATA 58.692 50.000 4.84 0.00 42.21 2.74
3307 6270 1.386525 CCGCAGTTGCATAAGCCCAT 61.387 55.000 4.84 0.00 42.21 4.00
3308 6271 2.045708 CCGCAGTTGCATAAGCCCA 61.046 57.895 4.84 0.00 42.21 5.36
3309 6272 2.800736 CCGCAGTTGCATAAGCCC 59.199 61.111 4.84 0.00 42.21 5.19
3310 6273 2.102946 GCCGCAGTTGCATAAGCC 59.897 61.111 4.84 0.00 42.21 4.35
3311 6274 1.095228 TAGGCCGCAGTTGCATAAGC 61.095 55.000 0.00 1.44 42.21 3.09
3312 6275 1.265095 CATAGGCCGCAGTTGCATAAG 59.735 52.381 0.00 0.00 42.21 1.73
3313 6276 1.308047 CATAGGCCGCAGTTGCATAA 58.692 50.000 0.00 0.00 42.21 1.90
3314 6277 1.165907 GCATAGGCCGCAGTTGCATA 61.166 55.000 0.00 0.00 42.21 3.14
3315 6278 2.484062 GCATAGGCCGCAGTTGCAT 61.484 57.895 0.00 0.00 42.21 3.96
3316 6279 3.133464 GCATAGGCCGCAGTTGCA 61.133 61.111 0.00 0.00 42.21 4.08
3317 6280 3.133464 TGCATAGGCCGCAGTTGC 61.133 61.111 0.00 4.23 40.13 4.17
3328 6291 5.124457 AGCTTTGTATTGTTCACCTGCATAG 59.876 40.000 0.00 0.00 0.00 2.23
3329 6292 5.009631 AGCTTTGTATTGTTCACCTGCATA 58.990 37.500 0.00 0.00 0.00 3.14
3330 6293 3.828451 AGCTTTGTATTGTTCACCTGCAT 59.172 39.130 0.00 0.00 0.00 3.96
3331 6294 3.004629 CAGCTTTGTATTGTTCACCTGCA 59.995 43.478 0.00 0.00 0.00 4.41
3332 6295 3.253188 TCAGCTTTGTATTGTTCACCTGC 59.747 43.478 0.00 0.00 0.00 4.85
3333 6296 5.633830 ATCAGCTTTGTATTGTTCACCTG 57.366 39.130 0.00 0.00 0.00 4.00
3334 6297 6.237901 TGTATCAGCTTTGTATTGTTCACCT 58.762 36.000 0.00 0.00 0.00 4.00
3335 6298 6.494893 TGTATCAGCTTTGTATTGTTCACC 57.505 37.500 0.00 0.00 0.00 4.02
3336 6299 7.023575 CCTTGTATCAGCTTTGTATTGTTCAC 58.976 38.462 0.00 0.00 0.00 3.18
3337 6300 6.714810 ACCTTGTATCAGCTTTGTATTGTTCA 59.285 34.615 0.00 0.00 0.00 3.18
3338 6301 7.145932 ACCTTGTATCAGCTTTGTATTGTTC 57.854 36.000 0.00 0.00 0.00 3.18
3339 6302 7.370383 CAACCTTGTATCAGCTTTGTATTGTT 58.630 34.615 0.00 0.00 0.00 2.83
3340 6303 6.071952 CCAACCTTGTATCAGCTTTGTATTGT 60.072 38.462 0.00 0.00 0.00 2.71
3341 6304 6.071952 ACCAACCTTGTATCAGCTTTGTATTG 60.072 38.462 0.00 0.00 0.00 1.90
3342 6305 6.010219 ACCAACCTTGTATCAGCTTTGTATT 58.990 36.000 0.00 0.00 0.00 1.89
3343 6306 5.415701 CACCAACCTTGTATCAGCTTTGTAT 59.584 40.000 0.00 0.00 0.00 2.29
3344 6307 4.759693 CACCAACCTTGTATCAGCTTTGTA 59.240 41.667 0.00 0.00 0.00 2.41
3345 6308 3.569701 CACCAACCTTGTATCAGCTTTGT 59.430 43.478 0.00 0.00 0.00 2.83
3346 6309 3.820467 TCACCAACCTTGTATCAGCTTTG 59.180 43.478 0.00 0.00 0.00 2.77
3347 6310 4.098914 TCACCAACCTTGTATCAGCTTT 57.901 40.909 0.00 0.00 0.00 3.51
3348 6311 3.788227 TCACCAACCTTGTATCAGCTT 57.212 42.857 0.00 0.00 0.00 3.74
3349 6312 4.307032 AATCACCAACCTTGTATCAGCT 57.693 40.909 0.00 0.00 0.00 4.24
3350 6313 6.509418 TTAAATCACCAACCTTGTATCAGC 57.491 37.500 0.00 0.00 0.00 4.26
3360 6323 9.533253 CCTTGAATCAATATTAAATCACCAACC 57.467 33.333 0.00 0.00 0.00 3.77
3361 6324 9.034544 GCCTTGAATCAATATTAAATCACCAAC 57.965 33.333 0.00 0.00 0.00 3.77
3362 6325 8.756927 TGCCTTGAATCAATATTAAATCACCAA 58.243 29.630 0.00 0.00 0.00 3.67
3363 6326 8.303780 TGCCTTGAATCAATATTAAATCACCA 57.696 30.769 0.00 0.00 0.00 4.17
3364 6327 9.034544 GTTGCCTTGAATCAATATTAAATCACC 57.965 33.333 0.00 0.00 0.00 4.02
3365 6328 9.585099 TGTTGCCTTGAATCAATATTAAATCAC 57.415 29.630 0.00 0.00 0.00 3.06
3368 6331 9.550406 CCATGTTGCCTTGAATCAATATTAAAT 57.450 29.630 0.00 0.00 0.00 1.40
3369 6332 8.538701 ACCATGTTGCCTTGAATCAATATTAAA 58.461 29.630 0.00 0.00 0.00 1.52
3370 6333 8.076910 ACCATGTTGCCTTGAATCAATATTAA 57.923 30.769 0.00 0.00 0.00 1.40
3371 6334 7.560991 AGACCATGTTGCCTTGAATCAATATTA 59.439 33.333 0.00 0.00 0.00 0.98
3372 6335 6.381994 AGACCATGTTGCCTTGAATCAATATT 59.618 34.615 0.00 0.00 0.00 1.28
3373 6336 5.895534 AGACCATGTTGCCTTGAATCAATAT 59.104 36.000 0.00 0.00 0.00 1.28
3374 6337 5.263599 AGACCATGTTGCCTTGAATCAATA 58.736 37.500 0.00 0.00 0.00 1.90
3375 6338 4.091549 AGACCATGTTGCCTTGAATCAAT 58.908 39.130 0.00 0.00 0.00 2.57
3376 6339 3.499338 AGACCATGTTGCCTTGAATCAA 58.501 40.909 0.00 0.00 0.00 2.57
3377 6340 3.159213 AGACCATGTTGCCTTGAATCA 57.841 42.857 0.00 0.00 0.00 2.57
3378 6341 4.265073 AGTAGACCATGTTGCCTTGAATC 58.735 43.478 0.00 0.00 0.00 2.52
3379 6342 4.307032 AGTAGACCATGTTGCCTTGAAT 57.693 40.909 0.00 0.00 0.00 2.57
3380 6343 3.788227 AGTAGACCATGTTGCCTTGAA 57.212 42.857 0.00 0.00 0.00 2.69
3381 6344 4.384098 CCATAGTAGACCATGTTGCCTTGA 60.384 45.833 0.00 0.00 0.00 3.02
3382 6345 3.879295 CCATAGTAGACCATGTTGCCTTG 59.121 47.826 0.00 0.00 0.00 3.61
3383 6346 3.523564 ACCATAGTAGACCATGTTGCCTT 59.476 43.478 0.00 0.00 0.00 4.35
3384 6347 3.115390 ACCATAGTAGACCATGTTGCCT 58.885 45.455 0.00 0.00 0.00 4.75
3385 6348 3.560636 ACCATAGTAGACCATGTTGCC 57.439 47.619 0.00 0.00 0.00 4.52
3386 6349 4.261801 ACAACCATAGTAGACCATGTTGC 58.738 43.478 0.00 0.00 0.00 4.17
3387 6350 5.391950 GCAACAACCATAGTAGACCATGTTG 60.392 44.000 10.11 10.11 45.50 3.33
3388 6351 4.700213 GCAACAACCATAGTAGACCATGTT 59.300 41.667 0.00 0.00 0.00 2.71
3389 6352 4.261801 GCAACAACCATAGTAGACCATGT 58.738 43.478 0.00 0.00 0.00 3.21
3390 6353 3.309682 CGCAACAACCATAGTAGACCATG 59.690 47.826 0.00 0.00 0.00 3.66
3391 6354 3.531538 CGCAACAACCATAGTAGACCAT 58.468 45.455 0.00 0.00 0.00 3.55
3392 6355 2.933492 GCGCAACAACCATAGTAGACCA 60.933 50.000 0.30 0.00 0.00 4.02
3393 6356 1.664151 GCGCAACAACCATAGTAGACC 59.336 52.381 0.30 0.00 0.00 3.85
3394 6357 2.618053 AGCGCAACAACCATAGTAGAC 58.382 47.619 11.47 0.00 0.00 2.59
3395 6358 3.259064 GAAGCGCAACAACCATAGTAGA 58.741 45.455 11.47 0.00 0.00 2.59
3396 6359 2.351726 GGAAGCGCAACAACCATAGTAG 59.648 50.000 11.47 0.00 0.00 2.57
3397 6360 2.289756 TGGAAGCGCAACAACCATAGTA 60.290 45.455 11.47 0.00 0.00 1.82
3398 6361 1.165270 GGAAGCGCAACAACCATAGT 58.835 50.000 11.47 0.00 0.00 2.12
3399 6362 1.164411 TGGAAGCGCAACAACCATAG 58.836 50.000 11.47 0.00 0.00 2.23
3400 6363 1.472082 CATGGAAGCGCAACAACCATA 59.528 47.619 11.47 0.00 38.99 2.74
3401 6364 0.244450 CATGGAAGCGCAACAACCAT 59.756 50.000 11.47 13.51 41.25 3.55
3402 6365 1.106351 ACATGGAAGCGCAACAACCA 61.106 50.000 11.47 11.70 35.09 3.67
3403 6366 0.664166 CACATGGAAGCGCAACAACC 60.664 55.000 11.47 5.77 0.00 3.77
3404 6367 0.310543 TCACATGGAAGCGCAACAAC 59.689 50.000 11.47 0.00 0.00 3.32
3405 6368 1.199789 GATCACATGGAAGCGCAACAA 59.800 47.619 11.47 0.00 0.00 2.83
3406 6369 0.804364 GATCACATGGAAGCGCAACA 59.196 50.000 11.47 5.53 0.00 3.33
3407 6370 0.804364 TGATCACATGGAAGCGCAAC 59.196 50.000 11.47 2.10 0.00 4.17
3408 6371 1.672363 GATGATCACATGGAAGCGCAA 59.328 47.619 11.47 0.00 36.82 4.85
3409 6372 1.134310 AGATGATCACATGGAAGCGCA 60.134 47.619 11.47 0.00 36.82 6.09
3410 6373 1.590932 AGATGATCACATGGAAGCGC 58.409 50.000 0.00 0.00 36.82 5.92
3411 6374 2.547211 GGAAGATGATCACATGGAAGCG 59.453 50.000 0.00 0.00 36.82 4.68
3412 6375 3.548770 TGGAAGATGATCACATGGAAGC 58.451 45.455 0.00 0.00 36.82 3.86
3413 6376 6.710597 ATTTGGAAGATGATCACATGGAAG 57.289 37.500 0.00 0.00 36.82 3.46
3414 6377 7.201723 CGTAATTTGGAAGATGATCACATGGAA 60.202 37.037 0.00 0.00 36.82 3.53
3415 6378 6.260714 CGTAATTTGGAAGATGATCACATGGA 59.739 38.462 0.00 0.00 36.82 3.41
3416 6379 6.038603 ACGTAATTTGGAAGATGATCACATGG 59.961 38.462 0.00 0.00 36.82 3.66
3417 6380 6.908820 CACGTAATTTGGAAGATGATCACATG 59.091 38.462 0.00 0.00 36.82 3.21
3418 6381 6.599244 ACACGTAATTTGGAAGATGATCACAT 59.401 34.615 0.00 0.00 39.67 3.21
3419 6382 5.937540 ACACGTAATTTGGAAGATGATCACA 59.062 36.000 0.00 0.00 0.00 3.58
3420 6383 6.422776 ACACGTAATTTGGAAGATGATCAC 57.577 37.500 0.00 0.00 0.00 3.06
3421 6384 7.390440 AGAAACACGTAATTTGGAAGATGATCA 59.610 33.333 0.00 0.00 0.00 2.92
3422 6385 7.752695 AGAAACACGTAATTTGGAAGATGATC 58.247 34.615 1.92 0.00 0.00 2.92
3423 6386 7.687941 AGAAACACGTAATTTGGAAGATGAT 57.312 32.000 1.92 0.00 0.00 2.45
3424 6387 7.227711 TGAAGAAACACGTAATTTGGAAGATGA 59.772 33.333 1.92 0.00 0.00 2.92
3425 6388 7.359595 TGAAGAAACACGTAATTTGGAAGATG 58.640 34.615 1.92 0.00 0.00 2.90
3426 6389 7.308589 CCTGAAGAAACACGTAATTTGGAAGAT 60.309 37.037 1.92 0.00 0.00 2.40
3427 6390 6.017440 CCTGAAGAAACACGTAATTTGGAAGA 60.017 38.462 1.92 0.00 0.00 2.87
3428 6391 6.142817 CCTGAAGAAACACGTAATTTGGAAG 58.857 40.000 1.92 0.00 0.00 3.46
3429 6392 5.591067 ACCTGAAGAAACACGTAATTTGGAA 59.409 36.000 1.92 0.00 0.00 3.53
3430 6393 5.127491 ACCTGAAGAAACACGTAATTTGGA 58.873 37.500 1.92 0.00 0.00 3.53
3431 6394 5.432885 ACCTGAAGAAACACGTAATTTGG 57.567 39.130 1.92 0.41 0.00 3.28
3432 6395 7.377662 GGTTAACCTGAAGAAACACGTAATTTG 59.622 37.037 17.83 0.00 0.00 2.32
3433 6396 7.067251 TGGTTAACCTGAAGAAACACGTAATTT 59.933 33.333 24.78 0.00 36.82 1.82
3434 6397 6.543100 TGGTTAACCTGAAGAAACACGTAATT 59.457 34.615 24.78 0.00 36.82 1.40
3435 6398 6.056884 TGGTTAACCTGAAGAAACACGTAAT 58.943 36.000 24.78 0.00 36.82 1.89
3436 6399 5.426504 TGGTTAACCTGAAGAAACACGTAA 58.573 37.500 24.78 0.00 36.82 3.18
3437 6400 5.021033 TGGTTAACCTGAAGAAACACGTA 57.979 39.130 24.78 0.00 36.82 3.57
3438 6401 3.876341 TGGTTAACCTGAAGAAACACGT 58.124 40.909 24.78 0.00 36.82 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.