Multiple sequence alignment - TraesCS5B01G158100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G158100 chr5B 100.000 5400 0 0 1 5400 291390478 291385079 0.000000e+00 9973.0
1 TraesCS5B01G158100 chr5B 97.826 92 2 0 4646 4737 291385742 291385833 5.600000e-35 159.0
2 TraesCS5B01G158100 chr5B 89.130 92 9 1 4645 4735 572353099 572353190 4.420000e-21 113.0
3 TraesCS5B01G158100 chr5D 97.112 4363 97 15 814 5156 257135534 257131181 0.000000e+00 7332.0
4 TraesCS5B01G158100 chr5D 97.701 174 3 1 5155 5327 257131098 257130925 1.140000e-76 298.0
5 TraesCS5B01G158100 chr5D 90.000 100 3 1 4645 4737 465001224 465001323 7.350000e-24 122.0
6 TraesCS5B01G158100 chr5D 88.298 94 5 4 4645 4738 457336417 457336330 2.060000e-19 108.0
7 TraesCS5B01G158100 chr5D 100.000 29 0 0 330 358 63412270 63412242 3.000000e-03 54.7
8 TraesCS5B01G158100 chr5A 95.299 4169 125 28 1158 5289 341947333 341943199 0.000000e+00 6547.0
9 TraesCS5B01G158100 chr5A 94.017 351 10 6 814 1157 341948047 341947701 6.200000e-144 521.0
10 TraesCS5B01G158100 chr5A 82.927 82 14 0 310 391 105684403 105684322 2.090000e-09 75.0
11 TraesCS5B01G158100 chrUn 98.701 77 1 0 5324 5400 75632790 75632714 2.620000e-28 137.0
12 TraesCS5B01G158100 chrUn 96.386 83 3 0 5318 5400 186676893 186676975 2.620000e-28 137.0
13 TraesCS5B01G158100 chrUn 97.403 77 2 0 5324 5400 75641491 75641415 1.220000e-26 132.0
14 TraesCS5B01G158100 chrUn 95.181 83 4 0 5318 5400 186668990 186669072 1.220000e-26 132.0
15 TraesCS5B01G158100 chrUn 97.403 77 1 1 5324 5400 75637660 75637585 4.390000e-26 130.0
16 TraesCS5B01G158100 chr7B 97.500 80 1 1 5321 5400 240643730 240643808 9.430000e-28 135.0
17 TraesCS5B01G158100 chr7B 88.172 93 6 1 4645 4737 426367745 426367832 7.400000e-19 106.0
18 TraesCS5B01G158100 chr7B 88.889 45 3 2 294 337 108247911 108247868 3.000000e-03 54.7
19 TraesCS5B01G158100 chr1D 77.974 227 43 7 245 467 434614937 434614714 9.430000e-28 135.0
20 TraesCS5B01G158100 chr6B 96.296 81 2 1 5320 5400 687263316 687263395 1.220000e-26 132.0
21 TraesCS5B01G158100 chr3B 96.296 81 2 1 5320 5400 68497329 68497250 1.220000e-26 132.0
22 TraesCS5B01G158100 chr1B 96.250 80 3 0 5321 5400 396601973 396602052 1.220000e-26 132.0
23 TraesCS5B01G158100 chr4A 90.526 95 7 1 4645 4737 739735412 739735318 2.040000e-24 124.0
24 TraesCS5B01G158100 chr4A 88.542 96 8 2 4645 4737 742131907 742131812 4.420000e-21 113.0
25 TraesCS5B01G158100 chr6A 89.474 95 9 1 4646 4739 608978304 608978210 9.500000e-23 119.0
26 TraesCS5B01G158100 chr7D 85.965 57 6 2 331 387 17270346 17270400 5.840000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G158100 chr5B 291385079 291390478 5399 True 9973 9973 100.0000 1 5400 1 chr5B.!!$R1 5399
1 TraesCS5B01G158100 chr5D 257130925 257135534 4609 True 3815 7332 97.4065 814 5327 2 chr5D.!!$R3 4513
2 TraesCS5B01G158100 chr5A 341943199 341948047 4848 True 3534 6547 94.6580 814 5289 2 chr5A.!!$R2 4475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.036105 TCACGATGGCAAGCATGAGT 60.036 50.000 0.0 0.0 0.00 3.41 F
247 248 0.097674 GGCAAGCATGAGTGTAAGCG 59.902 55.000 0.0 0.0 0.00 4.68 F
331 332 0.099436 GACTTGACATTGATGCCCGC 59.901 55.000 0.0 0.0 0.00 6.13 F
466 467 0.175302 CTCAATCTCTCGCAGGTGCT 59.825 55.000 0.0 0.0 39.32 4.40 F
2178 2553 0.976641 AGGCTTTCTGTGATGTCGGA 59.023 50.000 0.0 0.0 0.00 4.55 F
2395 2770 1.146359 TCTATAGGGTCGGCAGGCTAA 59.854 52.381 0.0 0.0 0.00 3.09 F
4016 4413 0.112412 TCCCTTTCTGTTGGAAGCCC 59.888 55.000 0.0 0.0 35.16 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 2112 2.280797 GCACTGCACAGGGACGAA 60.281 61.111 3.54 0.00 32.29 3.85 R
2178 2553 2.912956 TGACTGAGCCTTATCCAGGTTT 59.087 45.455 0.00 0.00 46.07 3.27 R
2264 2639 2.107204 AGTCCTTTCTTGCACAGTCCAT 59.893 45.455 0.00 0.00 0.00 3.41 R
2563 2938 6.461231 GGAACAACTCCGCTGTCTATTATACT 60.461 42.308 0.00 0.00 33.37 2.12 R
3900 4276 2.056577 CAACCTCGTTCGGTCAAGTAC 58.943 52.381 0.00 0.00 35.89 2.73 R
4032 4429 4.606457 ATTCCAAGATTTTCTTCGCGAG 57.394 40.909 9.59 3.89 33.78 5.03 R
5193 5700 0.767998 TGAGTGCACCCATACCAACA 59.232 50.000 14.63 0.00 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.997482 TTTAAACCATATAATCTTCGACTTTGC 57.003 29.630 0.00 0.00 0.00 3.68
44 45 7.624360 AAACCATATAATCTTCGACTTTGCA 57.376 32.000 0.00 0.00 0.00 4.08
45 46 6.851222 ACCATATAATCTTCGACTTTGCAG 57.149 37.500 0.00 0.00 0.00 4.41
46 47 5.760253 ACCATATAATCTTCGACTTTGCAGG 59.240 40.000 0.00 0.00 0.00 4.85
47 48 5.334414 CCATATAATCTTCGACTTTGCAGGC 60.334 44.000 0.00 0.00 0.00 4.85
53 54 3.882025 GACTTTGCAGGCGGAGAG 58.118 61.111 0.00 0.00 0.00 3.20
54 55 1.293498 GACTTTGCAGGCGGAGAGA 59.707 57.895 0.00 0.00 0.00 3.10
55 56 0.107945 GACTTTGCAGGCGGAGAGAT 60.108 55.000 0.00 0.00 0.00 2.75
56 57 0.326264 ACTTTGCAGGCGGAGAGATT 59.674 50.000 0.00 0.00 0.00 2.40
57 58 1.012841 CTTTGCAGGCGGAGAGATTC 58.987 55.000 0.00 0.00 0.00 2.52
58 59 0.615331 TTTGCAGGCGGAGAGATTCT 59.385 50.000 0.00 0.00 0.00 2.40
59 60 0.107993 TTGCAGGCGGAGAGATTCTG 60.108 55.000 0.00 0.00 35.13 3.02
60 61 0.972471 TGCAGGCGGAGAGATTCTGA 60.972 55.000 0.00 0.00 33.75 3.27
61 62 0.392336 GCAGGCGGAGAGATTCTGAT 59.608 55.000 0.00 0.00 33.75 2.90
62 63 1.615883 GCAGGCGGAGAGATTCTGATA 59.384 52.381 0.00 0.00 33.75 2.15
63 64 2.352617 GCAGGCGGAGAGATTCTGATAG 60.353 54.545 0.00 0.00 33.75 2.08
64 65 2.230992 CAGGCGGAGAGATTCTGATAGG 59.769 54.545 0.00 0.00 33.75 2.57
65 66 2.158385 AGGCGGAGAGATTCTGATAGGT 60.158 50.000 0.00 0.00 33.75 3.08
66 67 2.029470 GGCGGAGAGATTCTGATAGGTG 60.029 54.545 0.00 0.00 33.75 4.00
67 68 2.625790 GCGGAGAGATTCTGATAGGTGT 59.374 50.000 0.00 0.00 33.75 4.16
68 69 3.305064 GCGGAGAGATTCTGATAGGTGTC 60.305 52.174 0.00 0.00 33.75 3.67
69 70 4.141287 CGGAGAGATTCTGATAGGTGTCT 58.859 47.826 0.00 0.00 33.75 3.41
70 71 4.582656 CGGAGAGATTCTGATAGGTGTCTT 59.417 45.833 0.00 0.00 33.75 3.01
71 72 5.068460 CGGAGAGATTCTGATAGGTGTCTTT 59.932 44.000 0.00 0.00 33.75 2.52
72 73 6.406400 CGGAGAGATTCTGATAGGTGTCTTTT 60.406 42.308 0.00 0.00 33.75 2.27
73 74 6.983890 GGAGAGATTCTGATAGGTGTCTTTTC 59.016 42.308 0.00 0.00 0.00 2.29
74 75 6.568869 AGAGATTCTGATAGGTGTCTTTTCG 58.431 40.000 0.00 0.00 0.00 3.46
75 76 6.153680 AGAGATTCTGATAGGTGTCTTTTCGT 59.846 38.462 0.00 0.00 0.00 3.85
76 77 6.334202 AGATTCTGATAGGTGTCTTTTCGTC 58.666 40.000 0.00 0.00 0.00 4.20
77 78 5.723672 TTCTGATAGGTGTCTTTTCGTCT 57.276 39.130 0.00 0.00 0.00 4.18
78 79 5.312120 TCTGATAGGTGTCTTTTCGTCTC 57.688 43.478 0.00 0.00 0.00 3.36
79 80 4.158025 TCTGATAGGTGTCTTTTCGTCTCC 59.842 45.833 0.00 0.00 0.00 3.71
80 81 3.830178 TGATAGGTGTCTTTTCGTCTCCA 59.170 43.478 0.00 0.00 0.00 3.86
81 82 4.466370 TGATAGGTGTCTTTTCGTCTCCAT 59.534 41.667 0.00 0.00 0.00 3.41
82 83 3.045601 AGGTGTCTTTTCGTCTCCATG 57.954 47.619 0.00 0.00 0.00 3.66
83 84 2.368875 AGGTGTCTTTTCGTCTCCATGT 59.631 45.455 0.00 0.00 0.00 3.21
84 85 2.480419 GGTGTCTTTTCGTCTCCATGTG 59.520 50.000 0.00 0.00 0.00 3.21
85 86 3.390135 GTGTCTTTTCGTCTCCATGTGA 58.610 45.455 0.00 0.00 0.00 3.58
86 87 3.430218 GTGTCTTTTCGTCTCCATGTGAG 59.570 47.826 5.18 5.18 42.90 3.51
109 110 5.698545 AGAACTTCTCTCATGGAGTTTTTCG 59.301 40.000 9.98 0.00 42.40 3.46
110 111 4.962155 ACTTCTCTCATGGAGTTTTTCGT 58.038 39.130 9.98 0.62 42.40 3.85
111 112 6.097915 ACTTCTCTCATGGAGTTTTTCGTA 57.902 37.500 9.98 0.00 42.40 3.43
112 113 6.702329 ACTTCTCTCATGGAGTTTTTCGTAT 58.298 36.000 9.98 0.00 42.40 3.06
113 114 7.837863 ACTTCTCTCATGGAGTTTTTCGTATA 58.162 34.615 9.98 0.00 42.40 1.47
114 115 8.478877 ACTTCTCTCATGGAGTTTTTCGTATAT 58.521 33.333 9.98 0.00 42.40 0.86
115 116 9.319143 CTTCTCTCATGGAGTTTTTCGTATATT 57.681 33.333 9.98 0.00 42.40 1.28
116 117 9.667107 TTCTCTCATGGAGTTTTTCGTATATTT 57.333 29.630 9.98 0.00 42.40 1.40
144 145 3.694535 TTTTTATTTGGCGTGTGTCGT 57.305 38.095 0.00 0.00 42.13 4.34
145 146 3.694535 TTTTATTTGGCGTGTGTCGTT 57.305 38.095 0.00 0.00 42.13 3.85
146 147 2.672188 TTATTTGGCGTGTGTCGTTG 57.328 45.000 0.00 0.00 42.13 4.10
147 148 1.584175 TATTTGGCGTGTGTCGTTGT 58.416 45.000 0.00 0.00 42.13 3.32
148 149 0.736053 ATTTGGCGTGTGTCGTTGTT 59.264 45.000 0.00 0.00 42.13 2.83
149 150 0.179187 TTTGGCGTGTGTCGTTGTTG 60.179 50.000 0.00 0.00 42.13 3.33
150 151 1.983196 TTGGCGTGTGTCGTTGTTGG 61.983 55.000 0.00 0.00 42.13 3.77
151 152 2.326550 GCGTGTGTCGTTGTTGGG 59.673 61.111 0.00 0.00 42.13 4.12
152 153 2.466140 GCGTGTGTCGTTGTTGGGT 61.466 57.895 0.00 0.00 42.13 4.51
153 154 1.350319 CGTGTGTCGTTGTTGGGTG 59.650 57.895 0.00 0.00 34.52 4.61
154 155 1.063488 GTGTGTCGTTGTTGGGTGC 59.937 57.895 0.00 0.00 0.00 5.01
155 156 1.078072 TGTGTCGTTGTTGGGTGCT 60.078 52.632 0.00 0.00 0.00 4.40
156 157 0.178301 TGTGTCGTTGTTGGGTGCTA 59.822 50.000 0.00 0.00 0.00 3.49
157 158 0.865769 GTGTCGTTGTTGGGTGCTAG 59.134 55.000 0.00 0.00 0.00 3.42
158 159 0.753867 TGTCGTTGTTGGGTGCTAGA 59.246 50.000 0.00 0.00 0.00 2.43
159 160 1.346395 TGTCGTTGTTGGGTGCTAGAT 59.654 47.619 0.00 0.00 0.00 1.98
160 161 2.563620 TGTCGTTGTTGGGTGCTAGATA 59.436 45.455 0.00 0.00 0.00 1.98
161 162 3.196901 TGTCGTTGTTGGGTGCTAGATAT 59.803 43.478 0.00 0.00 0.00 1.63
162 163 4.403113 TGTCGTTGTTGGGTGCTAGATATA 59.597 41.667 0.00 0.00 0.00 0.86
163 164 5.069914 TGTCGTTGTTGGGTGCTAGATATAT 59.930 40.000 0.00 0.00 0.00 0.86
164 165 5.989777 GTCGTTGTTGGGTGCTAGATATATT 59.010 40.000 0.00 0.00 0.00 1.28
165 166 6.482308 GTCGTTGTTGGGTGCTAGATATATTT 59.518 38.462 0.00 0.00 0.00 1.40
166 167 7.012044 GTCGTTGTTGGGTGCTAGATATATTTT 59.988 37.037 0.00 0.00 0.00 1.82
167 168 7.011950 TCGTTGTTGGGTGCTAGATATATTTTG 59.988 37.037 0.00 0.00 0.00 2.44
168 169 7.201696 CGTTGTTGGGTGCTAGATATATTTTGT 60.202 37.037 0.00 0.00 0.00 2.83
169 170 8.466798 GTTGTTGGGTGCTAGATATATTTTGTT 58.533 33.333 0.00 0.00 0.00 2.83
170 171 9.688091 TTGTTGGGTGCTAGATATATTTTGTTA 57.312 29.630 0.00 0.00 0.00 2.41
171 172 9.688091 TGTTGGGTGCTAGATATATTTTGTTAA 57.312 29.630 0.00 0.00 0.00 2.01
191 192 8.994429 TGTTAAAGAAGAAATGCAAGTTTTCA 57.006 26.923 12.50 0.00 35.90 2.69
192 193 9.598517 TGTTAAAGAAGAAATGCAAGTTTTCAT 57.401 25.926 12.50 2.01 35.90 2.57
193 194 9.853921 GTTAAAGAAGAAATGCAAGTTTTCATG 57.146 29.630 12.50 0.00 35.90 3.07
194 195 9.814899 TTAAAGAAGAAATGCAAGTTTTCATGA 57.185 25.926 12.50 0.00 35.90 3.07
195 196 7.704789 AAGAAGAAATGCAAGTTTTCATGAC 57.295 32.000 12.50 2.95 35.90 3.06
196 197 6.808829 AGAAGAAATGCAAGTTTTCATGACA 58.191 32.000 12.50 0.00 35.90 3.58
197 198 7.439381 AGAAGAAATGCAAGTTTTCATGACAT 58.561 30.769 12.50 0.00 35.90 3.06
198 199 7.597743 AGAAGAAATGCAAGTTTTCATGACATC 59.402 33.333 12.50 0.00 35.90 3.06
199 200 6.751157 AGAAATGCAAGTTTTCATGACATCA 58.249 32.000 12.50 0.00 35.90 3.07
200 201 7.383687 AGAAATGCAAGTTTTCATGACATCAT 58.616 30.769 12.50 0.00 35.90 2.45
201 202 7.876068 AGAAATGCAAGTTTTCATGACATCATT 59.124 29.630 12.50 0.00 35.90 2.57
202 203 7.972832 AATGCAAGTTTTCATGACATCATTT 57.027 28.000 0.00 0.00 33.61 2.32
203 204 7.972832 ATGCAAGTTTTCATGACATCATTTT 57.027 28.000 0.00 0.00 33.61 1.82
204 205 7.179927 TGCAAGTTTTCATGACATCATTTTG 57.820 32.000 0.00 0.00 33.61 2.44
205 206 6.985059 TGCAAGTTTTCATGACATCATTTTGA 59.015 30.769 0.00 0.00 33.61 2.69
206 207 7.170151 TGCAAGTTTTCATGACATCATTTTGAG 59.830 33.333 0.00 0.00 33.61 3.02
207 208 7.170320 GCAAGTTTTCATGACATCATTTTGAGT 59.830 33.333 0.00 0.00 33.61 3.41
208 209 8.484799 CAAGTTTTCATGACATCATTTTGAGTG 58.515 33.333 0.00 0.00 33.61 3.51
209 210 7.149973 AGTTTTCATGACATCATTTTGAGTGG 58.850 34.615 0.00 0.00 33.61 4.00
210 211 5.648178 TTCATGACATCATTTTGAGTGGG 57.352 39.130 0.00 0.00 33.61 4.61
211 212 4.018490 TCATGACATCATTTTGAGTGGGG 58.982 43.478 0.00 0.00 33.61 4.96
212 213 3.524095 TGACATCATTTTGAGTGGGGT 57.476 42.857 0.00 0.00 0.00 4.95
213 214 3.420893 TGACATCATTTTGAGTGGGGTC 58.579 45.455 0.00 0.00 0.00 4.46
214 215 3.074390 TGACATCATTTTGAGTGGGGTCT 59.926 43.478 0.00 0.00 0.00 3.85
215 216 4.288366 TGACATCATTTTGAGTGGGGTCTA 59.712 41.667 0.00 0.00 0.00 2.59
216 217 5.222027 TGACATCATTTTGAGTGGGGTCTAA 60.222 40.000 0.00 0.00 0.00 2.10
217 218 5.010282 ACATCATTTTGAGTGGGGTCTAAC 58.990 41.667 0.00 0.00 0.00 2.34
218 219 4.993705 TCATTTTGAGTGGGGTCTAACT 57.006 40.909 0.00 0.00 0.00 2.24
219 220 5.319043 TCATTTTGAGTGGGGTCTAACTT 57.681 39.130 0.00 0.00 0.00 2.66
220 221 5.701224 TCATTTTGAGTGGGGTCTAACTTT 58.299 37.500 0.00 0.00 0.00 2.66
221 222 6.133356 TCATTTTGAGTGGGGTCTAACTTTT 58.867 36.000 0.00 0.00 0.00 2.27
222 223 6.264518 TCATTTTGAGTGGGGTCTAACTTTTC 59.735 38.462 0.00 0.00 0.00 2.29
223 224 4.781775 TTGAGTGGGGTCTAACTTTTCA 57.218 40.909 0.00 0.00 0.00 2.69
224 225 4.081322 TGAGTGGGGTCTAACTTTTCAC 57.919 45.455 0.00 0.00 0.00 3.18
225 226 3.064931 GAGTGGGGTCTAACTTTTCACG 58.935 50.000 0.00 0.00 0.00 4.35
226 227 2.701951 AGTGGGGTCTAACTTTTCACGA 59.298 45.455 0.00 0.00 0.00 4.35
227 228 3.326880 AGTGGGGTCTAACTTTTCACGAT 59.673 43.478 0.00 0.00 0.00 3.73
228 229 3.435671 GTGGGGTCTAACTTTTCACGATG 59.564 47.826 0.00 0.00 0.00 3.84
229 230 3.007635 GGGGTCTAACTTTTCACGATGG 58.992 50.000 0.00 0.00 0.00 3.51
230 231 2.418976 GGGTCTAACTTTTCACGATGGC 59.581 50.000 0.00 0.00 0.00 4.40
231 232 3.071479 GGTCTAACTTTTCACGATGGCA 58.929 45.455 0.00 0.00 0.00 4.92
232 233 3.500680 GGTCTAACTTTTCACGATGGCAA 59.499 43.478 0.00 0.00 0.00 4.52
233 234 4.378459 GGTCTAACTTTTCACGATGGCAAG 60.378 45.833 0.00 0.00 0.00 4.01
234 235 2.422276 AACTTTTCACGATGGCAAGC 57.578 45.000 0.00 0.00 0.00 4.01
235 236 1.317613 ACTTTTCACGATGGCAAGCA 58.682 45.000 0.00 0.00 0.00 3.91
236 237 1.888512 ACTTTTCACGATGGCAAGCAT 59.111 42.857 0.00 0.00 0.00 3.79
237 238 2.256174 CTTTTCACGATGGCAAGCATG 58.744 47.619 0.00 0.00 0.00 4.06
238 239 1.532523 TTTCACGATGGCAAGCATGA 58.467 45.000 0.00 0.00 0.00 3.07
239 240 1.089112 TTCACGATGGCAAGCATGAG 58.911 50.000 0.00 0.00 0.00 2.90
240 241 0.036105 TCACGATGGCAAGCATGAGT 60.036 50.000 0.00 0.00 0.00 3.41
241 242 0.098200 CACGATGGCAAGCATGAGTG 59.902 55.000 0.00 0.00 0.00 3.51
242 243 0.321919 ACGATGGCAAGCATGAGTGT 60.322 50.000 0.00 0.00 0.00 3.55
243 244 1.066215 ACGATGGCAAGCATGAGTGTA 60.066 47.619 0.00 0.00 0.00 2.90
244 245 2.009051 CGATGGCAAGCATGAGTGTAA 58.991 47.619 0.00 0.00 0.00 2.41
245 246 2.031314 CGATGGCAAGCATGAGTGTAAG 59.969 50.000 0.00 0.00 0.00 2.34
246 247 1.167851 TGGCAAGCATGAGTGTAAGC 58.832 50.000 0.00 0.00 0.00 3.09
247 248 0.097674 GGCAAGCATGAGTGTAAGCG 59.902 55.000 0.00 0.00 0.00 4.68
248 249 1.078709 GCAAGCATGAGTGTAAGCGA 58.921 50.000 0.00 0.00 0.00 4.93
249 250 1.464608 GCAAGCATGAGTGTAAGCGAA 59.535 47.619 0.00 0.00 0.00 4.70
250 251 2.096496 GCAAGCATGAGTGTAAGCGAAT 59.904 45.455 0.00 0.00 0.00 3.34
251 252 3.786818 GCAAGCATGAGTGTAAGCGAATC 60.787 47.826 0.00 0.00 0.00 2.52
252 253 3.251479 AGCATGAGTGTAAGCGAATCA 57.749 42.857 0.00 0.00 0.00 2.57
253 254 3.599343 AGCATGAGTGTAAGCGAATCAA 58.401 40.909 0.00 0.00 0.00 2.57
254 255 4.194640 AGCATGAGTGTAAGCGAATCAAT 58.805 39.130 0.00 0.00 0.00 2.57
255 256 5.359756 AGCATGAGTGTAAGCGAATCAATA 58.640 37.500 0.00 0.00 0.00 1.90
256 257 5.994054 AGCATGAGTGTAAGCGAATCAATAT 59.006 36.000 0.00 0.00 0.00 1.28
257 258 6.073385 AGCATGAGTGTAAGCGAATCAATATG 60.073 38.462 0.00 0.00 0.00 1.78
258 259 6.293081 GCATGAGTGTAAGCGAATCAATATGT 60.293 38.462 0.00 0.00 0.00 2.29
259 260 6.588348 TGAGTGTAAGCGAATCAATATGTG 57.412 37.500 0.00 0.00 0.00 3.21
260 261 6.337356 TGAGTGTAAGCGAATCAATATGTGA 58.663 36.000 0.00 0.00 41.67 3.58
275 276 7.627311 TCAATATGTGATTGGATGATAGGAGG 58.373 38.462 0.00 0.00 0.00 4.30
276 277 7.458806 TCAATATGTGATTGGATGATAGGAGGA 59.541 37.037 0.00 0.00 0.00 3.71
277 278 4.963318 TGTGATTGGATGATAGGAGGAC 57.037 45.455 0.00 0.00 0.00 3.85
278 279 4.297768 TGTGATTGGATGATAGGAGGACA 58.702 43.478 0.00 0.00 0.00 4.02
279 280 4.721274 TGTGATTGGATGATAGGAGGACAA 59.279 41.667 0.00 0.00 0.00 3.18
280 281 5.059833 GTGATTGGATGATAGGAGGACAAC 58.940 45.833 0.00 0.00 0.00 3.32
281 282 4.971282 TGATTGGATGATAGGAGGACAACT 59.029 41.667 0.00 0.00 0.00 3.16
282 283 4.760530 TTGGATGATAGGAGGACAACTG 57.239 45.455 0.00 0.00 0.00 3.16
283 284 3.724478 TGGATGATAGGAGGACAACTGT 58.276 45.455 0.00 0.00 0.00 3.55
284 285 4.878968 TGGATGATAGGAGGACAACTGTA 58.121 43.478 0.00 0.00 0.00 2.74
285 286 5.467738 TGGATGATAGGAGGACAACTGTAT 58.532 41.667 0.00 0.00 0.00 2.29
286 287 5.540337 TGGATGATAGGAGGACAACTGTATC 59.460 44.000 0.00 0.00 0.00 2.24
287 288 5.046950 GGATGATAGGAGGACAACTGTATCC 60.047 48.000 3.39 3.39 35.39 2.59
289 290 6.275692 TGATAGGAGGACAACTGTATCCTA 57.724 41.667 18.65 18.65 45.74 2.94
290 291 6.307776 TGATAGGAGGACAACTGTATCCTAG 58.692 44.000 20.03 0.00 45.74 3.02
291 292 3.301274 AGGAGGACAACTGTATCCTAGC 58.699 50.000 12.23 3.33 45.74 3.42
292 293 3.052490 AGGAGGACAACTGTATCCTAGCT 60.052 47.826 12.23 0.00 45.74 3.32
293 294 3.319689 GGAGGACAACTGTATCCTAGCTC 59.680 52.174 12.23 2.69 45.74 4.09
294 295 3.954904 GAGGACAACTGTATCCTAGCTCA 59.045 47.826 12.23 0.00 45.74 4.26
295 296 4.551671 AGGACAACTGTATCCTAGCTCAT 58.448 43.478 10.91 0.00 43.85 2.90
296 297 4.586841 AGGACAACTGTATCCTAGCTCATC 59.413 45.833 10.91 0.00 43.85 2.92
297 298 4.342378 GGACAACTGTATCCTAGCTCATCA 59.658 45.833 0.00 0.00 31.75 3.07
298 299 5.163405 GGACAACTGTATCCTAGCTCATCAA 60.163 44.000 0.00 0.00 31.75 2.57
299 300 6.299805 ACAACTGTATCCTAGCTCATCAAA 57.700 37.500 0.00 0.00 0.00 2.69
300 301 6.344500 ACAACTGTATCCTAGCTCATCAAAG 58.656 40.000 0.00 0.00 0.00 2.77
301 302 6.070538 ACAACTGTATCCTAGCTCATCAAAGT 60.071 38.462 0.00 0.00 0.00 2.66
302 303 6.552445 ACTGTATCCTAGCTCATCAAAGTT 57.448 37.500 0.00 0.00 0.00 2.66
303 304 6.951971 ACTGTATCCTAGCTCATCAAAGTTT 58.048 36.000 0.00 0.00 0.00 2.66
304 305 8.079211 ACTGTATCCTAGCTCATCAAAGTTTA 57.921 34.615 0.00 0.00 0.00 2.01
305 306 8.540388 ACTGTATCCTAGCTCATCAAAGTTTAA 58.460 33.333 0.00 0.00 0.00 1.52
306 307 9.383519 CTGTATCCTAGCTCATCAAAGTTTAAA 57.616 33.333 0.00 0.00 0.00 1.52
307 308 9.905713 TGTATCCTAGCTCATCAAAGTTTAAAT 57.094 29.630 0.00 0.00 0.00 1.40
310 311 9.692325 ATCCTAGCTCATCAAAGTTTAAATTCT 57.308 29.630 0.00 0.00 0.00 2.40
315 316 9.732130 AGCTCATCAAAGTTTAAATTCTAGACT 57.268 29.630 0.00 0.00 0.00 3.24
328 329 6.690194 AATTCTAGACTTGACATTGATGCC 57.310 37.500 0.00 0.00 0.00 4.40
329 330 4.142609 TCTAGACTTGACATTGATGCCC 57.857 45.455 0.00 0.00 0.00 5.36
330 331 1.742761 AGACTTGACATTGATGCCCG 58.257 50.000 0.00 0.00 0.00 6.13
331 332 0.099436 GACTTGACATTGATGCCCGC 59.901 55.000 0.00 0.00 0.00 6.13
332 333 0.608856 ACTTGACATTGATGCCCGCA 60.609 50.000 0.00 0.00 0.00 5.69
333 334 0.742505 CTTGACATTGATGCCCGCAT 59.257 50.000 0.82 0.82 39.69 4.73
334 335 1.135527 CTTGACATTGATGCCCGCATT 59.864 47.619 3.24 0.00 36.70 3.56
335 336 1.184431 TGACATTGATGCCCGCATTT 58.816 45.000 3.24 0.00 36.70 2.32
336 337 1.549620 TGACATTGATGCCCGCATTTT 59.450 42.857 3.24 0.00 36.70 1.82
337 338 2.195922 GACATTGATGCCCGCATTTTC 58.804 47.619 3.24 0.00 36.70 2.29
338 339 1.134729 ACATTGATGCCCGCATTTTCC 60.135 47.619 3.24 0.00 36.70 3.13
339 340 1.137479 CATTGATGCCCGCATTTTCCT 59.863 47.619 3.24 0.00 36.70 3.36
340 341 0.531657 TTGATGCCCGCATTTTCCTG 59.468 50.000 3.24 0.00 36.70 3.86
341 342 0.323269 TGATGCCCGCATTTTCCTGA 60.323 50.000 3.24 0.00 36.70 3.86
342 343 0.817013 GATGCCCGCATTTTCCTGAA 59.183 50.000 3.24 0.00 36.70 3.02
343 344 1.410153 GATGCCCGCATTTTCCTGAAT 59.590 47.619 3.24 0.00 36.70 2.57
344 345 1.265236 TGCCCGCATTTTCCTGAATT 58.735 45.000 0.00 0.00 0.00 2.17
345 346 1.622811 TGCCCGCATTTTCCTGAATTT 59.377 42.857 0.00 0.00 0.00 1.82
346 347 2.828520 TGCCCGCATTTTCCTGAATTTA 59.171 40.909 0.00 0.00 0.00 1.40
347 348 3.450457 TGCCCGCATTTTCCTGAATTTAT 59.550 39.130 0.00 0.00 0.00 1.40
348 349 4.081198 TGCCCGCATTTTCCTGAATTTATT 60.081 37.500 0.00 0.00 0.00 1.40
349 350 4.875536 GCCCGCATTTTCCTGAATTTATTT 59.124 37.500 0.00 0.00 0.00 1.40
350 351 5.006649 GCCCGCATTTTCCTGAATTTATTTC 59.993 40.000 0.00 0.00 34.72 2.17
351 352 6.105333 CCCGCATTTTCCTGAATTTATTTCA 58.895 36.000 0.00 0.00 42.09 2.69
364 365 8.263940 TGAATTTATTTCAGGTCTTCTAACGG 57.736 34.615 0.00 0.00 39.44 4.44
365 366 7.881232 TGAATTTATTTCAGGTCTTCTAACGGT 59.119 33.333 0.00 0.00 39.44 4.83
366 367 7.611213 ATTTATTTCAGGTCTTCTAACGGTG 57.389 36.000 0.00 0.00 0.00 4.94
367 368 4.618920 ATTTCAGGTCTTCTAACGGTGT 57.381 40.909 0.00 0.00 0.00 4.16
368 369 3.380479 TTCAGGTCTTCTAACGGTGTG 57.620 47.619 0.00 0.00 0.00 3.82
369 370 1.000506 TCAGGTCTTCTAACGGTGTGC 59.999 52.381 0.00 0.00 0.00 4.57
370 371 1.045407 AGGTCTTCTAACGGTGTGCA 58.955 50.000 0.00 0.00 0.00 4.57
371 372 1.623811 AGGTCTTCTAACGGTGTGCAT 59.376 47.619 0.00 0.00 0.00 3.96
372 373 2.038557 AGGTCTTCTAACGGTGTGCATT 59.961 45.455 0.00 0.00 0.00 3.56
373 374 2.415512 GGTCTTCTAACGGTGTGCATTC 59.584 50.000 0.00 0.00 0.00 2.67
374 375 3.064207 GTCTTCTAACGGTGTGCATTCA 58.936 45.455 0.00 0.00 0.00 2.57
375 376 3.123621 GTCTTCTAACGGTGTGCATTCAG 59.876 47.826 0.00 0.00 0.00 3.02
376 377 2.831685 TCTAACGGTGTGCATTCAGT 57.168 45.000 0.00 0.00 0.00 3.41
377 378 3.945981 TCTAACGGTGTGCATTCAGTA 57.054 42.857 0.00 0.00 0.00 2.74
378 379 4.260139 TCTAACGGTGTGCATTCAGTAA 57.740 40.909 0.00 0.00 0.00 2.24
379 380 4.242475 TCTAACGGTGTGCATTCAGTAAG 58.758 43.478 0.00 0.00 0.00 2.34
380 381 2.831685 ACGGTGTGCATTCAGTAAGA 57.168 45.000 0.00 0.00 0.00 2.10
381 382 2.688507 ACGGTGTGCATTCAGTAAGAG 58.311 47.619 0.00 0.00 0.00 2.85
382 383 2.002586 CGGTGTGCATTCAGTAAGAGG 58.997 52.381 0.00 0.00 0.00 3.69
383 384 2.359900 GGTGTGCATTCAGTAAGAGGG 58.640 52.381 0.00 0.00 0.00 4.30
384 385 2.359900 GTGTGCATTCAGTAAGAGGGG 58.640 52.381 0.00 0.00 0.00 4.79
385 386 2.027192 GTGTGCATTCAGTAAGAGGGGA 60.027 50.000 0.00 0.00 0.00 4.81
386 387 2.027192 TGTGCATTCAGTAAGAGGGGAC 60.027 50.000 0.00 0.00 0.00 4.46
387 388 1.207089 TGCATTCAGTAAGAGGGGACG 59.793 52.381 0.00 0.00 0.00 4.79
388 389 1.207329 GCATTCAGTAAGAGGGGACGT 59.793 52.381 0.00 0.00 0.00 4.34
389 390 2.354805 GCATTCAGTAAGAGGGGACGTT 60.355 50.000 0.00 0.00 0.00 3.99
390 391 3.522553 CATTCAGTAAGAGGGGACGTTC 58.477 50.000 0.00 0.00 0.00 3.95
391 392 2.599408 TCAGTAAGAGGGGACGTTCT 57.401 50.000 0.00 0.00 0.00 3.01
392 393 2.885616 TCAGTAAGAGGGGACGTTCTT 58.114 47.619 5.61 5.61 36.94 2.52
393 394 4.038271 TCAGTAAGAGGGGACGTTCTTA 57.962 45.455 3.80 3.80 35.25 2.10
394 395 4.607239 TCAGTAAGAGGGGACGTTCTTAT 58.393 43.478 9.91 0.00 37.46 1.73
395 396 5.759059 TCAGTAAGAGGGGACGTTCTTATA 58.241 41.667 9.91 0.00 37.46 0.98
396 397 5.826737 TCAGTAAGAGGGGACGTTCTTATAG 59.173 44.000 9.91 6.80 37.46 1.31
397 398 5.826737 CAGTAAGAGGGGACGTTCTTATAGA 59.173 44.000 9.91 0.00 37.46 1.98
398 399 5.827267 AGTAAGAGGGGACGTTCTTATAGAC 59.173 44.000 9.91 1.78 37.46 2.59
399 400 4.523168 AGAGGGGACGTTCTTATAGACT 57.477 45.455 0.00 0.00 0.00 3.24
400 401 5.643421 AGAGGGGACGTTCTTATAGACTA 57.357 43.478 0.00 0.00 0.00 2.59
401 402 5.375773 AGAGGGGACGTTCTTATAGACTAC 58.624 45.833 0.00 0.00 0.00 2.73
402 403 4.133078 AGGGGACGTTCTTATAGACTACG 58.867 47.826 0.00 0.00 35.31 3.51
403 404 4.130118 GGGGACGTTCTTATAGACTACGA 58.870 47.826 7.64 0.00 33.50 3.43
404 405 4.576463 GGGGACGTTCTTATAGACTACGAA 59.424 45.833 7.64 0.00 33.50 3.85
405 406 5.277731 GGGGACGTTCTTATAGACTACGAAG 60.278 48.000 7.64 0.83 33.50 3.79
406 407 5.277731 GGGACGTTCTTATAGACTACGAAGG 60.278 48.000 7.64 5.16 33.50 3.46
407 408 5.167218 ACGTTCTTATAGACTACGAAGGC 57.833 43.478 7.64 0.00 33.50 4.35
408 409 4.209870 CGTTCTTATAGACTACGAAGGCG 58.790 47.826 0.00 0.00 44.79 5.52
418 419 4.336581 CGAAGGCGTCTGTGACAA 57.663 55.556 0.00 0.00 32.09 3.18
419 420 1.853319 CGAAGGCGTCTGTGACAAC 59.147 57.895 0.00 0.00 32.09 3.32
420 421 0.597637 CGAAGGCGTCTGTGACAACT 60.598 55.000 0.00 0.00 32.09 3.16
421 422 1.583054 GAAGGCGTCTGTGACAACTT 58.417 50.000 0.00 1.92 33.21 2.66
422 423 1.527311 GAAGGCGTCTGTGACAACTTC 59.473 52.381 0.00 12.26 37.58 3.01
423 424 0.464036 AGGCGTCTGTGACAACTTCA 59.536 50.000 0.00 0.00 32.09 3.02
424 425 1.070758 AGGCGTCTGTGACAACTTCAT 59.929 47.619 0.00 0.00 36.32 2.57
425 426 1.873591 GGCGTCTGTGACAACTTCATT 59.126 47.619 0.00 0.00 36.32 2.57
426 427 3.064207 GGCGTCTGTGACAACTTCATTA 58.936 45.455 0.00 0.00 36.32 1.90
427 428 3.496884 GGCGTCTGTGACAACTTCATTAA 59.503 43.478 0.00 0.00 36.32 1.40
428 429 4.154195 GGCGTCTGTGACAACTTCATTAAT 59.846 41.667 0.00 0.00 36.32 1.40
429 430 5.316770 GCGTCTGTGACAACTTCATTAATC 58.683 41.667 0.00 0.00 36.32 1.75
430 431 5.120830 GCGTCTGTGACAACTTCATTAATCT 59.879 40.000 0.00 0.00 36.32 2.40
431 432 6.347725 GCGTCTGTGACAACTTCATTAATCTT 60.348 38.462 0.00 0.00 36.32 2.40
432 433 7.148639 GCGTCTGTGACAACTTCATTAATCTTA 60.149 37.037 0.00 0.00 36.32 2.10
433 434 8.708742 CGTCTGTGACAACTTCATTAATCTTAA 58.291 33.333 0.00 0.00 36.32 1.85
447 448 9.109393 TCATTAATCTTAATATAATGAGCCGGC 57.891 33.333 21.89 21.89 39.72 6.13
448 449 9.113838 CATTAATCTTAATATAATGAGCCGGCT 57.886 33.333 33.48 33.48 38.64 5.52
449 450 8.718102 TTAATCTTAATATAATGAGCCGGCTC 57.282 34.615 43.07 43.07 43.01 4.70
457 458 4.748409 GAGCCGGCTCAATCTCTC 57.252 61.111 44.10 21.01 42.31 3.20
458 459 1.299773 GAGCCGGCTCAATCTCTCG 60.300 63.158 44.10 0.00 42.31 4.04
459 460 2.964389 GCCGGCTCAATCTCTCGC 60.964 66.667 22.15 0.00 0.00 5.03
460 461 2.496341 CCGGCTCAATCTCTCGCA 59.504 61.111 0.00 0.00 0.00 5.10
461 462 1.591059 CCGGCTCAATCTCTCGCAG 60.591 63.158 0.00 0.00 0.00 5.18
462 463 1.591059 CGGCTCAATCTCTCGCAGG 60.591 63.158 0.00 0.00 0.00 4.85
463 464 1.519719 GGCTCAATCTCTCGCAGGT 59.480 57.895 0.00 0.00 0.00 4.00
464 465 0.809241 GGCTCAATCTCTCGCAGGTG 60.809 60.000 0.00 0.00 0.00 4.00
465 466 1.427592 GCTCAATCTCTCGCAGGTGC 61.428 60.000 0.00 0.00 37.78 5.01
466 467 0.175302 CTCAATCTCTCGCAGGTGCT 59.825 55.000 0.00 0.00 39.32 4.40
467 468 1.406898 CTCAATCTCTCGCAGGTGCTA 59.593 52.381 0.00 0.00 39.32 3.49
468 469 1.824852 TCAATCTCTCGCAGGTGCTAA 59.175 47.619 0.00 0.00 39.32 3.09
469 470 2.432146 TCAATCTCTCGCAGGTGCTAAT 59.568 45.455 0.00 0.00 39.32 1.73
470 471 3.636764 TCAATCTCTCGCAGGTGCTAATA 59.363 43.478 0.00 0.00 39.32 0.98
471 472 4.281941 TCAATCTCTCGCAGGTGCTAATAT 59.718 41.667 0.00 0.00 39.32 1.28
472 473 3.650070 TCTCTCGCAGGTGCTAATATG 57.350 47.619 0.00 0.00 39.32 1.78
473 474 3.222603 TCTCTCGCAGGTGCTAATATGA 58.777 45.455 0.00 0.00 39.32 2.15
474 475 3.829026 TCTCTCGCAGGTGCTAATATGAT 59.171 43.478 0.00 0.00 39.32 2.45
475 476 3.917988 TCTCGCAGGTGCTAATATGATG 58.082 45.455 0.00 0.00 39.32 3.07
476 477 3.321968 TCTCGCAGGTGCTAATATGATGT 59.678 43.478 0.00 0.00 39.32 3.06
477 478 3.392882 TCGCAGGTGCTAATATGATGTG 58.607 45.455 0.00 0.00 39.32 3.21
478 479 2.096069 CGCAGGTGCTAATATGATGTGC 60.096 50.000 0.00 0.00 39.32 4.57
479 480 2.880268 GCAGGTGCTAATATGATGTGCA 59.120 45.455 0.00 0.00 38.21 4.57
480 481 3.504906 GCAGGTGCTAATATGATGTGCAT 59.495 43.478 0.00 0.00 38.33 3.96
481 482 4.615223 GCAGGTGCTAATATGATGTGCATG 60.615 45.833 0.00 0.00 36.93 4.06
482 483 4.517832 CAGGTGCTAATATGATGTGCATGT 59.482 41.667 0.00 0.00 37.87 3.21
483 484 4.517832 AGGTGCTAATATGATGTGCATGTG 59.482 41.667 0.00 0.00 37.87 3.21
484 485 4.276678 GGTGCTAATATGATGTGCATGTGT 59.723 41.667 0.00 0.00 37.87 3.72
485 486 5.209977 GTGCTAATATGATGTGCATGTGTG 58.790 41.667 0.00 0.00 37.87 3.82
497 498 2.168326 CATGTGTGCAGAGTGTACCA 57.832 50.000 0.00 0.00 31.71 3.25
498 499 2.493035 CATGTGTGCAGAGTGTACCAA 58.507 47.619 0.00 0.00 31.71 3.67
499 500 2.700722 TGTGTGCAGAGTGTACCAAA 57.299 45.000 0.00 0.00 31.71 3.28
500 501 2.992593 TGTGTGCAGAGTGTACCAAAA 58.007 42.857 0.00 0.00 31.71 2.44
501 502 3.348119 TGTGTGCAGAGTGTACCAAAAA 58.652 40.909 0.00 0.00 31.71 1.94
523 524 6.849588 AAAATTGAAGAACCTGTGCAAATC 57.150 33.333 0.00 0.00 0.00 2.17
524 525 5.534207 AATTGAAGAACCTGTGCAAATCA 57.466 34.783 0.00 0.00 0.00 2.57
525 526 4.998671 TTGAAGAACCTGTGCAAATCAA 57.001 36.364 0.00 0.00 0.00 2.57
526 527 4.998671 TGAAGAACCTGTGCAAATCAAA 57.001 36.364 0.00 0.00 0.00 2.69
527 528 5.336150 TGAAGAACCTGTGCAAATCAAAA 57.664 34.783 0.00 0.00 0.00 2.44
528 529 5.108517 TGAAGAACCTGTGCAAATCAAAAC 58.891 37.500 0.00 0.00 0.00 2.43
529 530 5.105392 TGAAGAACCTGTGCAAATCAAAACT 60.105 36.000 0.00 0.00 0.00 2.66
530 531 6.096141 TGAAGAACCTGTGCAAATCAAAACTA 59.904 34.615 0.00 0.00 0.00 2.24
531 532 6.076981 AGAACCTGTGCAAATCAAAACTAG 57.923 37.500 0.00 0.00 0.00 2.57
532 533 4.853924 ACCTGTGCAAATCAAAACTAGG 57.146 40.909 0.00 0.00 0.00 3.02
533 534 3.005791 ACCTGTGCAAATCAAAACTAGGC 59.994 43.478 0.00 0.00 0.00 3.93
534 535 3.578688 CTGTGCAAATCAAAACTAGGCC 58.421 45.455 0.00 0.00 0.00 5.19
535 536 2.961741 TGTGCAAATCAAAACTAGGCCA 59.038 40.909 5.01 0.00 0.00 5.36
536 537 3.577848 TGTGCAAATCAAAACTAGGCCAT 59.422 39.130 5.01 0.00 0.00 4.40
537 538 4.769488 TGTGCAAATCAAAACTAGGCCATA 59.231 37.500 5.01 0.00 0.00 2.74
538 539 5.421693 TGTGCAAATCAAAACTAGGCCATAT 59.578 36.000 5.01 0.00 0.00 1.78
539 540 5.750067 GTGCAAATCAAAACTAGGCCATATG 59.250 40.000 5.01 0.00 0.00 1.78
540 541 4.746611 GCAAATCAAAACTAGGCCATATGC 59.253 41.667 5.01 0.00 40.16 3.14
541 542 4.836125 AATCAAAACTAGGCCATATGCG 57.164 40.909 5.01 0.00 42.61 4.73
542 543 3.275617 TCAAAACTAGGCCATATGCGT 57.724 42.857 5.01 0.00 42.61 5.24
543 544 2.942376 TCAAAACTAGGCCATATGCGTG 59.058 45.455 5.01 0.00 42.61 5.34
544 545 2.942376 CAAAACTAGGCCATATGCGTGA 59.058 45.455 5.01 0.00 42.61 4.35
545 546 3.275617 AAACTAGGCCATATGCGTGAA 57.724 42.857 5.01 0.00 42.61 3.18
546 547 3.275617 AACTAGGCCATATGCGTGAAA 57.724 42.857 5.01 0.00 42.61 2.69
547 548 2.838736 ACTAGGCCATATGCGTGAAAG 58.161 47.619 5.01 0.00 42.61 2.62
548 549 2.434336 ACTAGGCCATATGCGTGAAAGA 59.566 45.455 5.01 0.00 42.61 2.52
549 550 2.418368 AGGCCATATGCGTGAAAGAA 57.582 45.000 5.01 0.00 42.61 2.52
550 551 2.722094 AGGCCATATGCGTGAAAGAAA 58.278 42.857 5.01 0.00 42.61 2.52
551 552 3.088532 AGGCCATATGCGTGAAAGAAAA 58.911 40.909 5.01 0.00 42.61 2.29
552 553 3.509575 AGGCCATATGCGTGAAAGAAAAA 59.490 39.130 5.01 0.00 42.61 1.94
553 554 3.612423 GGCCATATGCGTGAAAGAAAAAC 59.388 43.478 0.00 0.00 42.61 2.43
554 555 4.233789 GCCATATGCGTGAAAGAAAAACA 58.766 39.130 0.00 0.00 0.00 2.83
555 556 4.683781 GCCATATGCGTGAAAGAAAAACAA 59.316 37.500 0.00 0.00 0.00 2.83
556 557 5.348451 GCCATATGCGTGAAAGAAAAACAAT 59.652 36.000 0.00 0.00 0.00 2.71
557 558 6.454186 GCCATATGCGTGAAAGAAAAACAATC 60.454 38.462 0.00 0.00 0.00 2.67
558 559 6.585702 CCATATGCGTGAAAGAAAAACAATCA 59.414 34.615 0.00 0.00 0.00 2.57
559 560 7.276218 CCATATGCGTGAAAGAAAAACAATCAT 59.724 33.333 0.00 0.00 0.00 2.45
560 561 8.649841 CATATGCGTGAAAGAAAAACAATCATT 58.350 29.630 0.00 0.00 0.00 2.57
561 562 6.900568 TGCGTGAAAGAAAAACAATCATTT 57.099 29.167 0.00 0.00 0.00 2.32
562 563 7.301068 TGCGTGAAAGAAAAACAATCATTTT 57.699 28.000 0.00 0.00 33.13 1.82
563 564 7.746929 TGCGTGAAAGAAAAACAATCATTTTT 58.253 26.923 0.00 0.00 42.94 1.94
580 581 3.577649 TTTTTGGTCGACAACTGCAAA 57.422 38.095 18.91 14.48 39.19 3.68
581 582 3.791973 TTTTGGTCGACAACTGCAAAT 57.208 38.095 18.91 0.00 39.19 2.32
582 583 3.791973 TTTGGTCGACAACTGCAAATT 57.208 38.095 18.91 0.00 39.19 1.82
583 584 3.791973 TTGGTCGACAACTGCAAATTT 57.208 38.095 18.91 0.00 33.18 1.82
584 585 3.347958 TGGTCGACAACTGCAAATTTC 57.652 42.857 18.91 0.00 0.00 2.17
585 586 2.685388 TGGTCGACAACTGCAAATTTCA 59.315 40.909 18.91 0.00 0.00 2.69
586 587 3.317711 TGGTCGACAACTGCAAATTTCAT 59.682 39.130 18.91 0.00 0.00 2.57
587 588 3.670055 GGTCGACAACTGCAAATTTCATG 59.330 43.478 18.91 0.00 0.00 3.07
588 589 3.670055 GTCGACAACTGCAAATTTCATGG 59.330 43.478 11.55 0.00 0.00 3.66
589 590 2.988493 CGACAACTGCAAATTTCATGGG 59.012 45.455 0.00 0.00 0.00 4.00
590 591 3.305267 CGACAACTGCAAATTTCATGGGA 60.305 43.478 0.00 0.00 0.00 4.37
591 592 4.630111 GACAACTGCAAATTTCATGGGAA 58.370 39.130 0.00 0.00 0.00 3.97
592 593 5.033589 ACAACTGCAAATTTCATGGGAAA 57.966 34.783 0.00 0.00 46.36 3.13
605 606 7.461182 TTTCATGGGAAATTACACCAGTTAG 57.539 36.000 0.00 0.00 38.07 2.34
606 607 6.381498 TCATGGGAAATTACACCAGTTAGA 57.619 37.500 0.00 0.00 37.75 2.10
607 608 6.785076 TCATGGGAAATTACACCAGTTAGAA 58.215 36.000 0.00 0.00 37.75 2.10
608 609 6.884295 TCATGGGAAATTACACCAGTTAGAAG 59.116 38.462 0.00 0.00 37.75 2.85
609 610 5.007682 TGGGAAATTACACCAGTTAGAAGC 58.992 41.667 0.00 0.00 0.00 3.86
610 611 5.007682 GGGAAATTACACCAGTTAGAAGCA 58.992 41.667 0.00 0.00 0.00 3.91
611 612 5.106277 GGGAAATTACACCAGTTAGAAGCAC 60.106 44.000 0.00 0.00 0.00 4.40
612 613 5.472137 GGAAATTACACCAGTTAGAAGCACA 59.528 40.000 0.00 0.00 0.00 4.57
613 614 6.016610 GGAAATTACACCAGTTAGAAGCACAA 60.017 38.462 0.00 0.00 0.00 3.33
614 615 6.560253 AATTACACCAGTTAGAAGCACAAG 57.440 37.500 0.00 0.00 0.00 3.16
615 616 2.222027 ACACCAGTTAGAAGCACAAGC 58.778 47.619 0.00 0.00 42.56 4.01
627 628 2.412421 GCACAAGCTCAAAAGACCTG 57.588 50.000 0.00 0.00 37.91 4.00
628 629 1.949525 GCACAAGCTCAAAAGACCTGA 59.050 47.619 0.00 0.00 37.91 3.86
629 630 2.287248 GCACAAGCTCAAAAGACCTGAC 60.287 50.000 0.00 0.00 37.91 3.51
630 631 2.945008 CACAAGCTCAAAAGACCTGACA 59.055 45.455 0.00 0.00 0.00 3.58
631 632 3.378112 CACAAGCTCAAAAGACCTGACAA 59.622 43.478 0.00 0.00 0.00 3.18
632 633 4.037208 CACAAGCTCAAAAGACCTGACAAT 59.963 41.667 0.00 0.00 0.00 2.71
633 634 5.239306 CACAAGCTCAAAAGACCTGACAATA 59.761 40.000 0.00 0.00 0.00 1.90
634 635 6.006449 ACAAGCTCAAAAGACCTGACAATAT 58.994 36.000 0.00 0.00 0.00 1.28
635 636 6.491403 ACAAGCTCAAAAGACCTGACAATATT 59.509 34.615 0.00 0.00 0.00 1.28
636 637 6.506500 AGCTCAAAAGACCTGACAATATTG 57.493 37.500 14.01 14.01 0.00 1.90
637 638 5.416952 AGCTCAAAAGACCTGACAATATTGG 59.583 40.000 19.37 4.29 0.00 3.16
638 639 5.415701 GCTCAAAAGACCTGACAATATTGGA 59.584 40.000 19.37 4.99 0.00 3.53
639 640 6.404074 GCTCAAAAGACCTGACAATATTGGAG 60.404 42.308 19.37 13.58 0.00 3.86
640 641 6.778821 TCAAAAGACCTGACAATATTGGAGA 58.221 36.000 19.37 2.24 0.00 3.71
641 642 7.405292 TCAAAAGACCTGACAATATTGGAGAT 58.595 34.615 19.37 1.96 0.00 2.75
642 643 7.337689 TCAAAAGACCTGACAATATTGGAGATG 59.662 37.037 19.37 6.56 0.00 2.90
643 644 5.301835 AGACCTGACAATATTGGAGATGG 57.698 43.478 19.37 14.53 0.00 3.51
644 645 4.971282 AGACCTGACAATATTGGAGATGGA 59.029 41.667 19.37 0.00 0.00 3.41
645 646 5.610132 AGACCTGACAATATTGGAGATGGAT 59.390 40.000 19.37 0.00 0.00 3.41
646 647 6.789457 AGACCTGACAATATTGGAGATGGATA 59.211 38.462 19.37 0.00 0.00 2.59
647 648 6.773638 ACCTGACAATATTGGAGATGGATAC 58.226 40.000 19.37 0.00 0.00 2.24
648 649 6.176183 CCTGACAATATTGGAGATGGATACC 58.824 44.000 19.37 0.00 0.00 2.73
649 650 6.013032 CCTGACAATATTGGAGATGGATACCT 60.013 42.308 19.37 0.00 0.00 3.08
650 651 7.180946 CCTGACAATATTGGAGATGGATACCTA 59.819 40.741 19.37 0.00 0.00 3.08
651 652 8.504811 TGACAATATTGGAGATGGATACCTAA 57.495 34.615 19.37 0.00 0.00 2.69
652 653 8.597167 TGACAATATTGGAGATGGATACCTAAG 58.403 37.037 19.37 0.00 0.00 2.18
653 654 7.922382 ACAATATTGGAGATGGATACCTAAGG 58.078 38.462 19.37 0.00 0.00 2.69
654 655 7.517604 ACAATATTGGAGATGGATACCTAAGGT 59.482 37.037 19.37 0.00 40.16 3.50
655 656 5.832539 ATTGGAGATGGATACCTAAGGTG 57.167 43.478 0.00 0.00 36.19 4.00
656 657 3.587498 TGGAGATGGATACCTAAGGTGG 58.413 50.000 0.00 0.00 36.19 4.61
657 658 2.303311 GGAGATGGATACCTAAGGTGGC 59.697 54.545 0.00 0.00 36.19 5.01
658 659 3.243724 GAGATGGATACCTAAGGTGGCT 58.756 50.000 0.00 0.00 36.19 4.75
659 660 3.648545 GAGATGGATACCTAAGGTGGCTT 59.351 47.826 0.00 0.00 36.19 4.35
660 661 3.392616 AGATGGATACCTAAGGTGGCTTG 59.607 47.826 0.00 0.00 36.19 4.01
661 662 1.843851 TGGATACCTAAGGTGGCTTGG 59.156 52.381 0.00 0.00 36.19 3.61
662 663 1.477014 GGATACCTAAGGTGGCTTGGC 60.477 57.143 0.00 0.00 36.19 4.52
663 664 1.211949 GATACCTAAGGTGGCTTGGCA 59.788 52.381 0.00 0.00 36.19 4.92
664 665 1.295020 TACCTAAGGTGGCTTGGCAT 58.705 50.000 0.00 0.00 36.19 4.40
665 666 1.295020 ACCTAAGGTGGCTTGGCATA 58.705 50.000 0.00 0.00 32.98 3.14
666 667 1.638589 ACCTAAGGTGGCTTGGCATAA 59.361 47.619 0.00 0.00 32.98 1.90
667 668 2.042433 ACCTAAGGTGGCTTGGCATAAA 59.958 45.455 0.00 0.00 32.98 1.40
668 669 3.096092 CCTAAGGTGGCTTGGCATAAAA 58.904 45.455 0.00 0.00 0.00 1.52
669 670 3.513515 CCTAAGGTGGCTTGGCATAAAAA 59.486 43.478 0.00 0.00 0.00 1.94
696 697 9.895138 ATATTTCCAACGGTTATTTACTGTAGT 57.105 29.630 0.00 0.00 45.71 2.73
698 699 9.895138 ATTTCCAACGGTTATTTACTGTAGTAT 57.105 29.630 0.00 0.00 45.71 2.12
699 700 9.723601 TTTCCAACGGTTATTTACTGTAGTATT 57.276 29.630 0.00 0.00 45.71 1.89
702 703 9.807649 CCAACGGTTATTTACTGTAGTATTAGT 57.192 33.333 0.00 0.00 45.71 2.24
704 705 8.862550 ACGGTTATTTACTGTAGTATTAGTGC 57.137 34.615 0.00 0.00 44.60 4.40
705 706 8.689972 ACGGTTATTTACTGTAGTATTAGTGCT 58.310 33.333 0.00 0.00 44.60 4.40
706 707 9.525409 CGGTTATTTACTGTAGTATTAGTGCTT 57.475 33.333 0.00 0.00 0.00 3.91
756 757 7.827819 TTGTAATAGAAGTGAGTGTATGTGC 57.172 36.000 0.00 0.00 0.00 4.57
757 758 6.033966 TGTAATAGAAGTGAGTGTATGTGCG 58.966 40.000 0.00 0.00 0.00 5.34
758 759 4.720649 ATAGAAGTGAGTGTATGTGCGT 57.279 40.909 0.00 0.00 0.00 5.24
759 760 5.830000 ATAGAAGTGAGTGTATGTGCGTA 57.170 39.130 0.00 0.00 0.00 4.42
760 761 4.720649 AGAAGTGAGTGTATGTGCGTAT 57.279 40.909 0.00 0.00 0.00 3.06
761 762 4.424626 AGAAGTGAGTGTATGTGCGTATG 58.575 43.478 0.00 0.00 0.00 2.39
762 763 3.868757 AGTGAGTGTATGTGCGTATGT 57.131 42.857 0.00 0.00 0.00 2.29
763 764 4.976224 AGTGAGTGTATGTGCGTATGTA 57.024 40.909 0.00 0.00 0.00 2.29
764 765 5.515797 AGTGAGTGTATGTGCGTATGTAT 57.484 39.130 0.00 0.00 0.00 2.29
765 766 6.628919 AGTGAGTGTATGTGCGTATGTATA 57.371 37.500 0.00 0.00 0.00 1.47
766 767 6.436261 AGTGAGTGTATGTGCGTATGTATAC 58.564 40.000 0.00 0.00 0.00 1.47
767 768 6.262496 AGTGAGTGTATGTGCGTATGTATACT 59.738 38.462 4.17 3.43 0.00 2.12
768 769 6.916387 GTGAGTGTATGTGCGTATGTATACTT 59.084 38.462 4.17 0.08 0.00 2.24
769 770 7.113124 GTGAGTGTATGTGCGTATGTATACTTC 59.887 40.741 4.17 0.00 0.00 3.01
770 771 6.140786 AGTGTATGTGCGTATGTATACTTCG 58.859 40.000 4.17 7.36 0.00 3.79
771 772 5.911280 GTGTATGTGCGTATGTATACTTCGT 59.089 40.000 4.17 0.00 0.00 3.85
772 773 6.085979 GTGTATGTGCGTATGTATACTTCGTC 59.914 42.308 4.17 4.21 0.00 4.20
773 774 4.888038 TGTGCGTATGTATACTTCGTCT 57.112 40.909 4.17 0.00 0.00 4.18
774 775 4.594136 TGTGCGTATGTATACTTCGTCTG 58.406 43.478 4.17 0.00 0.00 3.51
775 776 4.095334 TGTGCGTATGTATACTTCGTCTGT 59.905 41.667 4.17 0.00 0.00 3.41
776 777 4.436847 GTGCGTATGTATACTTCGTCTGTG 59.563 45.833 4.17 0.00 0.00 3.66
777 778 4.095334 TGCGTATGTATACTTCGTCTGTGT 59.905 41.667 4.17 0.00 0.00 3.72
778 779 5.032863 GCGTATGTATACTTCGTCTGTGTT 58.967 41.667 4.17 0.00 0.00 3.32
779 780 6.183360 TGCGTATGTATACTTCGTCTGTGTTA 60.183 38.462 4.17 0.00 0.00 2.41
780 781 6.688385 GCGTATGTATACTTCGTCTGTGTTAA 59.312 38.462 4.17 0.00 0.00 2.01
781 782 7.218773 GCGTATGTATACTTCGTCTGTGTTAAA 59.781 37.037 4.17 0.00 0.00 1.52
782 783 9.064804 CGTATGTATACTTCGTCTGTGTTAAAA 57.935 33.333 4.17 0.00 0.00 1.52
805 806 4.600012 AAAGAGCGTTATTGGAATCACG 57.400 40.909 2.43 2.43 38.62 4.35
806 807 3.520290 AGAGCGTTATTGGAATCACGA 57.480 42.857 9.66 0.00 38.03 4.35
807 808 4.060038 AGAGCGTTATTGGAATCACGAT 57.940 40.909 9.66 3.76 38.03 3.73
808 809 4.442706 AGAGCGTTATTGGAATCACGATT 58.557 39.130 9.66 0.00 38.03 3.34
809 810 4.876107 AGAGCGTTATTGGAATCACGATTT 59.124 37.500 9.66 0.00 38.03 2.17
810 811 5.354234 AGAGCGTTATTGGAATCACGATTTT 59.646 36.000 9.66 0.00 38.03 1.82
811 812 5.949735 AGCGTTATTGGAATCACGATTTTT 58.050 33.333 9.66 0.00 38.03 1.94
812 813 6.027749 AGCGTTATTGGAATCACGATTTTTC 58.972 36.000 9.66 0.00 38.03 2.29
857 859 3.131400 CGTGGAAAGGGAAAGGAAAACAA 59.869 43.478 0.00 0.00 0.00 2.83
871 873 9.678941 GAAAGGAAAACAATCTTCGAACTTTAT 57.321 29.630 0.00 0.00 0.00 1.40
1329 1704 4.070552 GCCGTCTCCGTGCTCCTT 62.071 66.667 0.00 0.00 0.00 3.36
1491 1866 2.183300 CGGATGGGCGACTTCGAA 59.817 61.111 2.02 0.00 43.02 3.71
1737 2112 9.517609 GACGTGAAGATCTATACTGTGTTAATT 57.482 33.333 0.00 0.00 0.00 1.40
2178 2553 0.976641 AGGCTTTCTGTGATGTCGGA 59.023 50.000 0.00 0.00 0.00 4.55
2264 2639 8.600449 TCAACAACGCACAATATCATGATATA 57.400 30.769 25.03 4.64 33.86 0.86
2395 2770 1.146359 TCTATAGGGTCGGCAGGCTAA 59.854 52.381 0.00 0.00 0.00 3.09
2563 2938 1.896220 AGCATTCAAGCTTGTTCGGA 58.104 45.000 25.19 3.36 43.70 4.55
2774 3149 2.439409 TGCCATGATGTTGTTCCAGAG 58.561 47.619 0.00 0.00 0.00 3.35
3773 4149 4.068599 TGGTTCGAGTAATGCATGTTTGA 58.931 39.130 0.00 0.00 0.00 2.69
3900 4276 1.342819 GGGTAGATGCTCTGCAGGTAG 59.657 57.143 15.13 5.91 43.65 3.18
4016 4413 0.112412 TCCCTTTCTGTTGGAAGCCC 59.888 55.000 0.00 0.00 35.16 5.19
4032 4429 5.360714 TGGAAGCCCTGACATCATATTTTTC 59.639 40.000 0.00 0.00 0.00 2.29
4037 4434 4.319046 CCCTGACATCATATTTTTCTCGCG 60.319 45.833 0.00 0.00 0.00 5.87
4139 4536 9.056005 TGTATTATGGTTAATGATCTCAAGCAC 57.944 33.333 8.03 0.00 33.01 4.40
4153 4550 5.240891 TCTCAAGCACTTTGAATGGTCTAG 58.759 41.667 0.00 0.00 44.84 2.43
4155 4552 4.756642 TCAAGCACTTTGAATGGTCTAGTG 59.243 41.667 0.00 0.00 42.69 2.74
4171 4568 6.041637 TGGTCTAGTGAGAAGAAAGCAACTTA 59.958 38.462 0.00 0.00 31.96 2.24
4400 4797 7.600375 ACATTCACTACAGAATACACACTTGAG 59.400 37.037 0.00 0.00 36.13 3.02
4596 4993 2.825532 CGATTTTGAACCCCAATCTGGT 59.174 45.455 0.00 0.00 35.17 4.00
4672 5069 4.322801 CCCTCCGATCCATATTACTTGTCC 60.323 50.000 0.00 0.00 0.00 4.02
4709 5120 6.582677 ATCTAGAGATACATCCGTTTGAGG 57.417 41.667 0.00 0.00 32.01 3.86
4794 5206 2.303175 TGTTGCTGGGTAAACCTTGAC 58.697 47.619 0.00 0.00 41.11 3.18
5093 5514 9.612620 AGAGTAATTTTCTTTTTGTAGCAATCG 57.387 29.630 0.00 0.00 0.00 3.34
5108 5529 7.075121 TGTAGCAATCGTCAAACACATTTAAG 58.925 34.615 0.00 0.00 0.00 1.85
5193 5700 5.859205 AGATGGTTTTTGTGCTTCTCTTT 57.141 34.783 0.00 0.00 0.00 2.52
5232 5739 7.412853 CACTCATATCCGAGAATTTTTCCTTG 58.587 38.462 0.00 0.00 36.47 3.61
5233 5740 7.280876 CACTCATATCCGAGAATTTTTCCTTGA 59.719 37.037 0.00 0.00 36.47 3.02
5234 5741 7.497249 ACTCATATCCGAGAATTTTTCCTTGAG 59.503 37.037 0.00 0.00 36.47 3.02
5328 5837 3.610637 CAACCCCCTTTGCATTGTG 57.389 52.632 0.00 0.00 0.00 3.33
5329 5838 0.758123 CAACCCCCTTTGCATTGTGT 59.242 50.000 0.00 0.00 0.00 3.72
5330 5839 1.140652 CAACCCCCTTTGCATTGTGTT 59.859 47.619 0.00 0.00 0.00 3.32
5331 5840 2.366916 CAACCCCCTTTGCATTGTGTTA 59.633 45.455 0.00 0.00 0.00 2.41
5332 5841 2.247358 ACCCCCTTTGCATTGTGTTAG 58.753 47.619 0.00 0.00 0.00 2.34
5333 5842 2.158385 ACCCCCTTTGCATTGTGTTAGA 60.158 45.455 0.00 0.00 0.00 2.10
5334 5843 2.493278 CCCCCTTTGCATTGTGTTAGAG 59.507 50.000 0.00 0.00 0.00 2.43
5335 5844 3.157087 CCCCTTTGCATTGTGTTAGAGT 58.843 45.455 0.00 0.00 0.00 3.24
5336 5845 4.331968 CCCCTTTGCATTGTGTTAGAGTA 58.668 43.478 0.00 0.00 0.00 2.59
5337 5846 4.156008 CCCCTTTGCATTGTGTTAGAGTAC 59.844 45.833 0.00 0.00 0.00 2.73
5338 5847 4.142902 CCCTTTGCATTGTGTTAGAGTACG 60.143 45.833 0.00 0.00 0.00 3.67
5339 5848 4.451096 CCTTTGCATTGTGTTAGAGTACGT 59.549 41.667 0.00 0.00 0.00 3.57
5340 5849 5.636121 CCTTTGCATTGTGTTAGAGTACGTA 59.364 40.000 0.00 0.00 0.00 3.57
5341 5850 6.146510 CCTTTGCATTGTGTTAGAGTACGTAA 59.853 38.462 0.00 0.00 0.00 3.18
5342 5851 7.148474 CCTTTGCATTGTGTTAGAGTACGTAAT 60.148 37.037 0.00 0.00 0.00 1.89
5343 5852 6.641176 TGCATTGTGTTAGAGTACGTAATG 57.359 37.500 0.00 0.00 32.09 1.90
5344 5853 5.579119 TGCATTGTGTTAGAGTACGTAATGG 59.421 40.000 0.00 0.00 30.80 3.16
5345 5854 5.006358 GCATTGTGTTAGAGTACGTAATGGG 59.994 44.000 0.00 0.00 30.80 4.00
5346 5855 4.114058 TGTGTTAGAGTACGTAATGGGC 57.886 45.455 0.00 0.00 0.00 5.36
5347 5856 3.119029 TGTGTTAGAGTACGTAATGGGCC 60.119 47.826 0.00 0.00 0.00 5.80
5348 5857 3.131755 GTGTTAGAGTACGTAATGGGCCT 59.868 47.826 4.53 0.00 0.00 5.19
5349 5858 4.339247 GTGTTAGAGTACGTAATGGGCCTA 59.661 45.833 4.53 0.00 0.00 3.93
5350 5859 4.955450 TGTTAGAGTACGTAATGGGCCTAA 59.045 41.667 4.53 0.00 0.00 2.69
5351 5860 5.599656 TGTTAGAGTACGTAATGGGCCTAAT 59.400 40.000 4.53 0.00 0.00 1.73
5352 5861 4.602340 AGAGTACGTAATGGGCCTAATG 57.398 45.455 4.53 0.00 0.00 1.90
5353 5862 3.323979 AGAGTACGTAATGGGCCTAATGG 59.676 47.826 4.53 0.00 0.00 3.16
5354 5863 2.370849 AGTACGTAATGGGCCTAATGGG 59.629 50.000 4.53 0.00 38.36 4.00
5369 5878 3.884037 AATGGGCCCATTAGTCTTAGG 57.116 47.619 42.77 0.00 43.92 2.69
5370 5879 1.518367 TGGGCCCATTAGTCTTAGGG 58.482 55.000 24.45 0.00 44.37 3.53
5371 5880 1.274767 TGGGCCCATTAGTCTTAGGGT 60.275 52.381 24.45 0.00 43.42 4.34
5372 5881 1.850998 GGGCCCATTAGTCTTAGGGTT 59.149 52.381 19.95 0.00 43.42 4.11
5373 5882 3.050835 GGGCCCATTAGTCTTAGGGTTA 58.949 50.000 19.95 0.00 43.42 2.85
5374 5883 3.460712 GGGCCCATTAGTCTTAGGGTTAA 59.539 47.826 19.95 0.00 43.42 2.01
5375 5884 4.105858 GGGCCCATTAGTCTTAGGGTTAAT 59.894 45.833 19.95 0.00 43.42 1.40
5376 5885 5.399842 GGGCCCATTAGTCTTAGGGTTAATT 60.400 44.000 19.95 0.00 43.42 1.40
5377 5886 6.183361 GGGCCCATTAGTCTTAGGGTTAATTA 60.183 42.308 19.95 0.00 43.42 1.40
5378 5887 6.940867 GGCCCATTAGTCTTAGGGTTAATTAG 59.059 42.308 0.00 0.00 43.42 1.73
5379 5888 7.202158 GGCCCATTAGTCTTAGGGTTAATTAGA 60.202 40.741 0.00 0.00 43.42 2.10
5380 5889 7.878644 GCCCATTAGTCTTAGGGTTAATTAGAG 59.121 40.741 0.00 0.00 43.42 2.43
5381 5890 9.155785 CCCATTAGTCTTAGGGTTAATTAGAGA 57.844 37.037 0.00 0.00 36.52 3.10
5387 5896 9.382307 AGTCTTAGGGTTAATTAGAGATAAGGG 57.618 37.037 8.51 0.00 0.00 3.95
5388 5897 9.156940 GTCTTAGGGTTAATTAGAGATAAGGGT 57.843 37.037 8.51 0.00 0.00 4.34
5389 5898 9.377238 TCTTAGGGTTAATTAGAGATAAGGGTC 57.623 37.037 8.51 0.00 0.00 4.46
5390 5899 6.667558 AGGGTTAATTAGAGATAAGGGTCG 57.332 41.667 0.00 0.00 0.00 4.79
5391 5900 5.011840 AGGGTTAATTAGAGATAAGGGTCGC 59.988 44.000 0.00 0.00 0.00 5.19
5392 5901 5.011840 GGGTTAATTAGAGATAAGGGTCGCT 59.988 44.000 0.00 0.00 32.84 4.93
5393 5902 6.464039 GGGTTAATTAGAGATAAGGGTCGCTT 60.464 42.308 7.38 7.38 30.69 4.68
5394 5903 6.424207 GGTTAATTAGAGATAAGGGTCGCTTG 59.576 42.308 12.19 0.00 30.69 4.01
5395 5904 5.615925 AATTAGAGATAAGGGTCGCTTGT 57.384 39.130 12.19 5.50 30.69 3.16
5396 5905 5.615925 ATTAGAGATAAGGGTCGCTTGTT 57.384 39.130 12.19 0.00 30.69 2.83
5397 5906 3.983044 AGAGATAAGGGTCGCTTGTTT 57.017 42.857 12.19 0.85 0.00 2.83
5398 5907 6.534475 TTAGAGATAAGGGTCGCTTGTTTA 57.466 37.500 12.19 0.00 30.69 2.01
5399 5908 5.012328 AGAGATAAGGGTCGCTTGTTTAG 57.988 43.478 12.19 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 9.997482 GCAAAGTCGAAGATTATATGGTTTAAA 57.003 29.630 0.00 0.00 40.67 1.52
18 19 9.168451 TGCAAAGTCGAAGATTATATGGTTTAA 57.832 29.630 0.00 0.00 40.67 1.52
19 20 8.725405 TGCAAAGTCGAAGATTATATGGTTTA 57.275 30.769 0.00 0.00 40.67 2.01
20 21 7.201732 CCTGCAAAGTCGAAGATTATATGGTTT 60.202 37.037 0.00 0.00 40.67 3.27
21 22 6.260936 CCTGCAAAGTCGAAGATTATATGGTT 59.739 38.462 0.00 0.00 40.67 3.67
22 23 5.760253 CCTGCAAAGTCGAAGATTATATGGT 59.240 40.000 0.00 0.00 40.67 3.55
23 24 5.334414 GCCTGCAAAGTCGAAGATTATATGG 60.334 44.000 0.00 0.00 40.67 2.74
24 25 5.613360 CGCCTGCAAAGTCGAAGATTATATG 60.613 44.000 0.00 0.00 40.67 1.78
25 26 4.449068 CGCCTGCAAAGTCGAAGATTATAT 59.551 41.667 0.00 0.00 40.67 0.86
26 27 3.802139 CGCCTGCAAAGTCGAAGATTATA 59.198 43.478 0.00 0.00 40.67 0.98
27 28 2.609459 CGCCTGCAAAGTCGAAGATTAT 59.391 45.455 0.00 0.00 40.67 1.28
28 29 1.999735 CGCCTGCAAAGTCGAAGATTA 59.000 47.619 0.00 0.00 40.67 1.75
29 30 0.798776 CGCCTGCAAAGTCGAAGATT 59.201 50.000 0.00 0.00 40.67 2.40
30 31 1.021390 CCGCCTGCAAAGTCGAAGAT 61.021 55.000 0.00 0.00 40.67 2.40
31 32 1.667830 CCGCCTGCAAAGTCGAAGA 60.668 57.895 0.00 0.00 0.00 2.87
32 33 1.630244 CTCCGCCTGCAAAGTCGAAG 61.630 60.000 0.00 0.00 0.00 3.79
33 34 1.667830 CTCCGCCTGCAAAGTCGAA 60.668 57.895 0.00 0.00 0.00 3.71
34 35 2.048222 CTCCGCCTGCAAAGTCGA 60.048 61.111 0.00 0.00 0.00 4.20
35 36 2.048222 TCTCCGCCTGCAAAGTCG 60.048 61.111 0.00 0.00 0.00 4.18
36 37 0.107945 ATCTCTCCGCCTGCAAAGTC 60.108 55.000 0.00 0.00 0.00 3.01
37 38 0.326264 AATCTCTCCGCCTGCAAAGT 59.674 50.000 0.00 0.00 0.00 2.66
38 39 1.012841 GAATCTCTCCGCCTGCAAAG 58.987 55.000 0.00 0.00 0.00 2.77
39 40 0.615331 AGAATCTCTCCGCCTGCAAA 59.385 50.000 0.00 0.00 0.00 3.68
40 41 0.107993 CAGAATCTCTCCGCCTGCAA 60.108 55.000 0.00 0.00 0.00 4.08
41 42 0.972471 TCAGAATCTCTCCGCCTGCA 60.972 55.000 0.00 0.00 0.00 4.41
42 43 0.392336 ATCAGAATCTCTCCGCCTGC 59.608 55.000 0.00 0.00 0.00 4.85
43 44 2.230992 CCTATCAGAATCTCTCCGCCTG 59.769 54.545 0.00 0.00 0.00 4.85
44 45 2.158385 ACCTATCAGAATCTCTCCGCCT 60.158 50.000 0.00 0.00 0.00 5.52
45 46 2.029470 CACCTATCAGAATCTCTCCGCC 60.029 54.545 0.00 0.00 0.00 6.13
46 47 2.625790 ACACCTATCAGAATCTCTCCGC 59.374 50.000 0.00 0.00 0.00 5.54
47 48 4.141287 AGACACCTATCAGAATCTCTCCG 58.859 47.826 0.00 0.00 0.00 4.63
48 49 6.478512 AAAGACACCTATCAGAATCTCTCC 57.521 41.667 0.00 0.00 0.00 3.71
49 50 6.695278 CGAAAAGACACCTATCAGAATCTCTC 59.305 42.308 0.00 0.00 0.00 3.20
50 51 6.153680 ACGAAAAGACACCTATCAGAATCTCT 59.846 38.462 0.00 0.00 0.00 3.10
51 52 6.334202 ACGAAAAGACACCTATCAGAATCTC 58.666 40.000 0.00 0.00 0.00 2.75
52 53 6.153680 AGACGAAAAGACACCTATCAGAATCT 59.846 38.462 0.00 0.00 0.00 2.40
53 54 6.334202 AGACGAAAAGACACCTATCAGAATC 58.666 40.000 0.00 0.00 0.00 2.52
54 55 6.287589 AGACGAAAAGACACCTATCAGAAT 57.712 37.500 0.00 0.00 0.00 2.40
55 56 5.336531 GGAGACGAAAAGACACCTATCAGAA 60.337 44.000 0.00 0.00 0.00 3.02
56 57 4.158025 GGAGACGAAAAGACACCTATCAGA 59.842 45.833 0.00 0.00 0.00 3.27
57 58 4.082190 TGGAGACGAAAAGACACCTATCAG 60.082 45.833 0.00 0.00 0.00 2.90
58 59 3.830178 TGGAGACGAAAAGACACCTATCA 59.170 43.478 0.00 0.00 0.00 2.15
59 60 4.451629 TGGAGACGAAAAGACACCTATC 57.548 45.455 0.00 0.00 0.00 2.08
60 61 4.223032 ACATGGAGACGAAAAGACACCTAT 59.777 41.667 0.00 0.00 0.00 2.57
61 62 3.576982 ACATGGAGACGAAAAGACACCTA 59.423 43.478 0.00 0.00 0.00 3.08
62 63 2.368875 ACATGGAGACGAAAAGACACCT 59.631 45.455 0.00 0.00 0.00 4.00
63 64 2.480419 CACATGGAGACGAAAAGACACC 59.520 50.000 0.00 0.00 0.00 4.16
64 65 3.390135 TCACATGGAGACGAAAAGACAC 58.610 45.455 0.00 0.00 0.00 3.67
65 66 3.744238 TCACATGGAGACGAAAAGACA 57.256 42.857 0.00 0.00 0.00 3.41
85 86 5.698545 CGAAAAACTCCATGAGAGAAGTTCT 59.301 40.000 4.68 4.68 46.50 3.01
86 87 5.467063 ACGAAAAACTCCATGAGAGAAGTTC 59.533 40.000 15.51 12.85 46.50 3.01
87 88 5.368989 ACGAAAAACTCCATGAGAGAAGTT 58.631 37.500 15.51 5.30 46.50 2.66
88 89 4.962155 ACGAAAAACTCCATGAGAGAAGT 58.038 39.130 15.51 0.00 46.50 3.01
89 90 8.879342 ATATACGAAAAACTCCATGAGAGAAG 57.121 34.615 15.51 0.00 46.50 2.85
90 91 9.667107 AAATATACGAAAAACTCCATGAGAGAA 57.333 29.630 15.51 0.00 46.50 2.87
124 125 3.694535 ACGACACACGCCAAATAAAAA 57.305 38.095 0.00 0.00 46.94 1.94
125 126 3.181499 ACAACGACACACGCCAAATAAAA 60.181 39.130 0.00 0.00 46.94 1.52
126 127 2.355132 ACAACGACACACGCCAAATAAA 59.645 40.909 0.00 0.00 46.94 1.40
127 128 1.941294 ACAACGACACACGCCAAATAA 59.059 42.857 0.00 0.00 46.94 1.40
128 129 1.584175 ACAACGACACACGCCAAATA 58.416 45.000 0.00 0.00 46.94 1.40
129 130 0.736053 AACAACGACACACGCCAAAT 59.264 45.000 0.00 0.00 46.94 2.32
130 131 0.179187 CAACAACGACACACGCCAAA 60.179 50.000 0.00 0.00 46.94 3.28
131 132 1.425825 CAACAACGACACACGCCAA 59.574 52.632 0.00 0.00 46.94 4.52
132 133 2.465299 CCAACAACGACACACGCCA 61.465 57.895 0.00 0.00 46.94 5.69
133 134 2.326550 CCAACAACGACACACGCC 59.673 61.111 0.00 0.00 46.94 5.68
134 135 2.326550 CCCAACAACGACACACGC 59.673 61.111 0.00 0.00 46.94 5.34
136 137 1.063488 GCACCCAACAACGACACAC 59.937 57.895 0.00 0.00 0.00 3.82
137 138 0.178301 TAGCACCCAACAACGACACA 59.822 50.000 0.00 0.00 0.00 3.72
138 139 0.865769 CTAGCACCCAACAACGACAC 59.134 55.000 0.00 0.00 0.00 3.67
139 140 0.753867 TCTAGCACCCAACAACGACA 59.246 50.000 0.00 0.00 0.00 4.35
140 141 2.094762 ATCTAGCACCCAACAACGAC 57.905 50.000 0.00 0.00 0.00 4.34
141 142 5.801531 ATATATCTAGCACCCAACAACGA 57.198 39.130 0.00 0.00 0.00 3.85
142 143 6.861065 AAATATATCTAGCACCCAACAACG 57.139 37.500 0.00 0.00 0.00 4.10
143 144 7.996385 ACAAAATATATCTAGCACCCAACAAC 58.004 34.615 0.00 0.00 0.00 3.32
144 145 8.588290 AACAAAATATATCTAGCACCCAACAA 57.412 30.769 0.00 0.00 0.00 2.83
145 146 9.688091 TTAACAAAATATATCTAGCACCCAACA 57.312 29.630 0.00 0.00 0.00 3.33
165 166 9.429359 TGAAAACTTGCATTTCTTCTTTAACAA 57.571 25.926 11.46 0.00 37.60 2.83
166 167 8.994429 TGAAAACTTGCATTTCTTCTTTAACA 57.006 26.923 11.46 0.00 37.60 2.41
167 168 9.853921 CATGAAAACTTGCATTTCTTCTTTAAC 57.146 29.630 11.46 0.00 37.60 2.01
168 169 9.814899 TCATGAAAACTTGCATTTCTTCTTTAA 57.185 25.926 11.46 0.00 37.60 1.52
169 170 9.248291 GTCATGAAAACTTGCATTTCTTCTTTA 57.752 29.630 11.46 0.00 37.60 1.85
170 171 7.765360 TGTCATGAAAACTTGCATTTCTTCTTT 59.235 29.630 11.46 0.00 37.60 2.52
171 172 7.267128 TGTCATGAAAACTTGCATTTCTTCTT 58.733 30.769 11.46 0.00 37.60 2.52
172 173 6.808829 TGTCATGAAAACTTGCATTTCTTCT 58.191 32.000 11.46 0.00 37.60 2.85
173 174 7.383029 TGATGTCATGAAAACTTGCATTTCTTC 59.617 33.333 11.46 3.31 37.60 2.87
174 175 7.211573 TGATGTCATGAAAACTTGCATTTCTT 58.788 30.769 11.46 3.98 37.60 2.52
175 176 6.751157 TGATGTCATGAAAACTTGCATTTCT 58.249 32.000 11.46 0.00 37.60 2.52
176 177 7.591006 ATGATGTCATGAAAACTTGCATTTC 57.409 32.000 0.00 4.62 37.31 2.17
177 178 7.972832 AATGATGTCATGAAAACTTGCATTT 57.027 28.000 0.00 0.00 36.56 2.32
178 179 7.972832 AAATGATGTCATGAAAACTTGCATT 57.027 28.000 0.00 0.00 36.56 3.56
179 180 7.658167 TCAAAATGATGTCATGAAAACTTGCAT 59.342 29.630 0.00 0.00 36.56 3.96
180 181 6.985059 TCAAAATGATGTCATGAAAACTTGCA 59.015 30.769 0.00 0.00 36.56 4.08
181 182 7.170320 ACTCAAAATGATGTCATGAAAACTTGC 59.830 33.333 0.00 0.00 36.56 4.01
182 183 8.484799 CACTCAAAATGATGTCATGAAAACTTG 58.515 33.333 0.00 0.00 36.56 3.16
183 184 7.654520 CCACTCAAAATGATGTCATGAAAACTT 59.345 33.333 0.00 0.00 36.56 2.66
184 185 7.149973 CCACTCAAAATGATGTCATGAAAACT 58.850 34.615 0.00 0.00 36.56 2.66
185 186 6.366877 CCCACTCAAAATGATGTCATGAAAAC 59.633 38.462 0.00 0.00 36.56 2.43
186 187 6.457355 CCCACTCAAAATGATGTCATGAAAA 58.543 36.000 0.00 0.00 36.56 2.29
187 188 5.047164 CCCCACTCAAAATGATGTCATGAAA 60.047 40.000 0.00 0.00 36.56 2.69
188 189 4.463539 CCCCACTCAAAATGATGTCATGAA 59.536 41.667 0.00 0.00 36.56 2.57
189 190 4.018490 CCCCACTCAAAATGATGTCATGA 58.982 43.478 0.00 0.00 36.56 3.07
190 191 3.765511 ACCCCACTCAAAATGATGTCATG 59.234 43.478 0.00 0.00 36.56 3.07
191 192 4.019174 GACCCCACTCAAAATGATGTCAT 58.981 43.478 0.00 0.00 38.41 3.06
192 193 3.074390 AGACCCCACTCAAAATGATGTCA 59.926 43.478 0.00 0.00 0.00 3.58
193 194 3.690460 AGACCCCACTCAAAATGATGTC 58.310 45.455 0.00 0.00 0.00 3.06
194 195 3.814504 AGACCCCACTCAAAATGATGT 57.185 42.857 0.00 0.00 0.00 3.06
195 196 5.256474 AGTTAGACCCCACTCAAAATGATG 58.744 41.667 0.00 0.00 0.00 3.07
196 197 5.520748 AGTTAGACCCCACTCAAAATGAT 57.479 39.130 0.00 0.00 0.00 2.45
197 198 4.993705 AGTTAGACCCCACTCAAAATGA 57.006 40.909 0.00 0.00 0.00 2.57
198 199 6.040391 TGAAAAGTTAGACCCCACTCAAAATG 59.960 38.462 0.00 0.00 0.00 2.32
199 200 6.040504 GTGAAAAGTTAGACCCCACTCAAAAT 59.959 38.462 0.00 0.00 0.00 1.82
200 201 5.358725 GTGAAAAGTTAGACCCCACTCAAAA 59.641 40.000 0.00 0.00 0.00 2.44
201 202 4.885325 GTGAAAAGTTAGACCCCACTCAAA 59.115 41.667 0.00 0.00 0.00 2.69
202 203 4.457466 GTGAAAAGTTAGACCCCACTCAA 58.543 43.478 0.00 0.00 0.00 3.02
203 204 3.493699 CGTGAAAAGTTAGACCCCACTCA 60.494 47.826 0.00 0.00 0.00 3.41
204 205 3.064931 CGTGAAAAGTTAGACCCCACTC 58.935 50.000 0.00 0.00 0.00 3.51
205 206 2.701951 TCGTGAAAAGTTAGACCCCACT 59.298 45.455 0.00 0.00 0.00 4.00
206 207 3.116079 TCGTGAAAAGTTAGACCCCAC 57.884 47.619 0.00 0.00 0.00 4.61
207 208 3.558321 CCATCGTGAAAAGTTAGACCCCA 60.558 47.826 0.00 0.00 0.00 4.96
208 209 3.007635 CCATCGTGAAAAGTTAGACCCC 58.992 50.000 0.00 0.00 0.00 4.95
209 210 2.418976 GCCATCGTGAAAAGTTAGACCC 59.581 50.000 0.00 0.00 0.00 4.46
210 211 3.071479 TGCCATCGTGAAAAGTTAGACC 58.929 45.455 0.00 0.00 0.00 3.85
211 212 4.712763 CTTGCCATCGTGAAAAGTTAGAC 58.287 43.478 0.00 0.00 0.00 2.59
212 213 3.188460 GCTTGCCATCGTGAAAAGTTAGA 59.812 43.478 0.00 0.00 0.00 2.10
213 214 3.058293 TGCTTGCCATCGTGAAAAGTTAG 60.058 43.478 0.00 0.00 0.00 2.34
214 215 2.881513 TGCTTGCCATCGTGAAAAGTTA 59.118 40.909 0.00 0.00 0.00 2.24
215 216 1.680735 TGCTTGCCATCGTGAAAAGTT 59.319 42.857 0.00 0.00 0.00 2.66
216 217 1.317613 TGCTTGCCATCGTGAAAAGT 58.682 45.000 0.00 0.00 0.00 2.66
217 218 2.095110 TCATGCTTGCCATCGTGAAAAG 60.095 45.455 0.00 0.00 29.71 2.27
218 219 1.885233 TCATGCTTGCCATCGTGAAAA 59.115 42.857 0.00 0.00 29.71 2.29
219 220 1.469703 CTCATGCTTGCCATCGTGAAA 59.530 47.619 0.00 0.00 29.71 2.69
220 221 1.089112 CTCATGCTTGCCATCGTGAA 58.911 50.000 0.00 0.00 29.71 3.18
221 222 0.036105 ACTCATGCTTGCCATCGTGA 60.036 50.000 0.00 0.00 29.71 4.35
222 223 0.098200 CACTCATGCTTGCCATCGTG 59.902 55.000 0.00 0.00 29.71 4.35
223 224 0.321919 ACACTCATGCTTGCCATCGT 60.322 50.000 0.00 0.00 29.71 3.73
224 225 1.655484 TACACTCATGCTTGCCATCG 58.345 50.000 0.00 0.00 29.71 3.84
225 226 2.223433 GCTTACACTCATGCTTGCCATC 60.223 50.000 0.00 0.00 29.71 3.51
226 227 1.747355 GCTTACACTCATGCTTGCCAT 59.253 47.619 0.00 0.00 33.39 4.40
227 228 1.167851 GCTTACACTCATGCTTGCCA 58.832 50.000 0.00 0.00 0.00 4.92
228 229 0.097674 CGCTTACACTCATGCTTGCC 59.902 55.000 0.00 0.00 0.00 4.52
229 230 1.078709 TCGCTTACACTCATGCTTGC 58.921 50.000 0.00 0.00 0.00 4.01
230 231 3.371898 TGATTCGCTTACACTCATGCTTG 59.628 43.478 0.00 0.00 0.00 4.01
231 232 3.599343 TGATTCGCTTACACTCATGCTT 58.401 40.909 0.00 0.00 0.00 3.91
232 233 3.251479 TGATTCGCTTACACTCATGCT 57.749 42.857 0.00 0.00 0.00 3.79
233 234 4.542662 ATTGATTCGCTTACACTCATGC 57.457 40.909 0.00 0.00 0.00 4.06
234 235 7.042523 TCACATATTGATTCGCTTACACTCATG 60.043 37.037 0.00 0.00 0.00 3.07
235 236 6.986231 TCACATATTGATTCGCTTACACTCAT 59.014 34.615 0.00 0.00 0.00 2.90
236 237 6.337356 TCACATATTGATTCGCTTACACTCA 58.663 36.000 0.00 0.00 0.00 3.41
237 238 6.828502 TCACATATTGATTCGCTTACACTC 57.171 37.500 0.00 0.00 0.00 3.51
250 251 7.458806 TCCTCCTATCATCCAATCACATATTGA 59.541 37.037 0.00 0.00 39.11 2.57
251 252 7.551974 GTCCTCCTATCATCCAATCACATATTG 59.448 40.741 0.00 0.00 0.00 1.90
252 253 7.238305 TGTCCTCCTATCATCCAATCACATATT 59.762 37.037 0.00 0.00 0.00 1.28
253 254 6.732390 TGTCCTCCTATCATCCAATCACATAT 59.268 38.462 0.00 0.00 0.00 1.78
254 255 6.084060 TGTCCTCCTATCATCCAATCACATA 58.916 40.000 0.00 0.00 0.00 2.29
255 256 4.909695 TGTCCTCCTATCATCCAATCACAT 59.090 41.667 0.00 0.00 0.00 3.21
256 257 4.297768 TGTCCTCCTATCATCCAATCACA 58.702 43.478 0.00 0.00 0.00 3.58
257 258 4.963318 TGTCCTCCTATCATCCAATCAC 57.037 45.455 0.00 0.00 0.00 3.06
258 259 4.971282 AGTTGTCCTCCTATCATCCAATCA 59.029 41.667 0.00 0.00 0.00 2.57
259 260 5.163258 ACAGTTGTCCTCCTATCATCCAATC 60.163 44.000 0.00 0.00 0.00 2.67
260 261 4.723789 ACAGTTGTCCTCCTATCATCCAAT 59.276 41.667 0.00 0.00 0.00 3.16
261 262 4.104086 ACAGTTGTCCTCCTATCATCCAA 58.896 43.478 0.00 0.00 0.00 3.53
262 263 3.724478 ACAGTTGTCCTCCTATCATCCA 58.276 45.455 0.00 0.00 0.00 3.41
263 264 5.046950 GGATACAGTTGTCCTCCTATCATCC 60.047 48.000 6.56 0.00 30.22 3.51
264 265 5.777732 AGGATACAGTTGTCCTCCTATCATC 59.222 44.000 12.25 0.00 39.06 2.92
265 266 5.721225 AGGATACAGTTGTCCTCCTATCAT 58.279 41.667 12.25 0.00 39.06 2.45
266 267 5.144159 AGGATACAGTTGTCCTCCTATCA 57.856 43.478 12.25 0.00 39.06 2.15
267 268 5.184287 GCTAGGATACAGTTGTCCTCCTATC 59.816 48.000 17.22 12.59 42.25 2.08
268 269 5.081032 GCTAGGATACAGTTGTCCTCCTAT 58.919 45.833 17.22 3.84 42.25 2.57
269 270 4.168283 AGCTAGGATACAGTTGTCCTCCTA 59.832 45.833 16.49 16.49 42.25 2.94
270 271 3.052490 AGCTAGGATACAGTTGTCCTCCT 60.052 47.826 16.14 16.14 42.25 3.69
271 272 3.301274 AGCTAGGATACAGTTGTCCTCC 58.699 50.000 9.81 5.93 42.25 4.30
272 273 3.954904 TGAGCTAGGATACAGTTGTCCTC 59.045 47.826 9.81 0.00 42.25 3.71
273 274 3.982516 TGAGCTAGGATACAGTTGTCCT 58.017 45.455 10.98 10.98 45.10 3.85
274 275 4.342378 TGATGAGCTAGGATACAGTTGTCC 59.658 45.833 0.00 0.00 41.41 4.02
275 276 5.521906 TGATGAGCTAGGATACAGTTGTC 57.478 43.478 0.00 0.00 41.41 3.18
276 277 5.939764 TTGATGAGCTAGGATACAGTTGT 57.060 39.130 0.00 0.00 41.41 3.32
277 278 6.344500 ACTTTGATGAGCTAGGATACAGTTG 58.656 40.000 0.00 0.00 41.41 3.16
278 279 6.552445 ACTTTGATGAGCTAGGATACAGTT 57.448 37.500 0.00 0.00 41.41 3.16
279 280 6.552445 AACTTTGATGAGCTAGGATACAGT 57.448 37.500 0.00 0.00 41.41 3.55
280 281 8.948631 TTAAACTTTGATGAGCTAGGATACAG 57.051 34.615 0.00 0.00 41.41 2.74
281 282 9.905713 ATTTAAACTTTGATGAGCTAGGATACA 57.094 29.630 0.00 0.00 41.41 2.29
284 285 9.692325 AGAATTTAAACTTTGATGAGCTAGGAT 57.308 29.630 0.00 0.00 0.00 3.24
289 290 9.732130 AGTCTAGAATTTAAACTTTGATGAGCT 57.268 29.630 0.00 0.00 0.00 4.09
302 303 8.677300 GGCATCAATGTCAAGTCTAGAATTTAA 58.323 33.333 1.94 0.00 31.41 1.52
303 304 7.283127 GGGCATCAATGTCAAGTCTAGAATTTA 59.717 37.037 1.94 0.00 33.08 1.40
304 305 6.096001 GGGCATCAATGTCAAGTCTAGAATTT 59.904 38.462 1.94 0.00 33.08 1.82
305 306 5.591877 GGGCATCAATGTCAAGTCTAGAATT 59.408 40.000 0.00 0.00 33.08 2.17
306 307 5.128919 GGGCATCAATGTCAAGTCTAGAAT 58.871 41.667 0.00 0.00 33.08 2.40
307 308 4.517285 GGGCATCAATGTCAAGTCTAGAA 58.483 43.478 0.00 0.00 33.08 2.10
308 309 3.430790 CGGGCATCAATGTCAAGTCTAGA 60.431 47.826 0.00 0.00 33.08 2.43
309 310 2.868583 CGGGCATCAATGTCAAGTCTAG 59.131 50.000 0.00 0.00 33.08 2.43
310 311 2.905075 CGGGCATCAATGTCAAGTCTA 58.095 47.619 0.00 0.00 33.08 2.59
311 312 1.742761 CGGGCATCAATGTCAAGTCT 58.257 50.000 0.00 0.00 33.08 3.24
312 313 0.099436 GCGGGCATCAATGTCAAGTC 59.901 55.000 0.00 0.00 33.08 3.01
313 314 0.608856 TGCGGGCATCAATGTCAAGT 60.609 50.000 0.00 0.00 33.08 3.16
314 315 0.742505 ATGCGGGCATCAATGTCAAG 59.257 50.000 0.00 0.00 33.08 3.02
315 316 1.184431 AATGCGGGCATCAATGTCAA 58.816 45.000 6.61 0.00 35.31 3.18
316 317 1.184431 AAATGCGGGCATCAATGTCA 58.816 45.000 6.61 0.00 35.31 3.58
317 318 2.195922 GAAAATGCGGGCATCAATGTC 58.804 47.619 6.61 0.00 35.31 3.06
318 319 1.134729 GGAAAATGCGGGCATCAATGT 60.135 47.619 6.61 0.00 35.31 2.71
319 320 1.137479 AGGAAAATGCGGGCATCAATG 59.863 47.619 6.61 0.00 35.31 2.82
320 321 1.137479 CAGGAAAATGCGGGCATCAAT 59.863 47.619 6.61 0.00 35.31 2.57
321 322 0.531657 CAGGAAAATGCGGGCATCAA 59.468 50.000 6.61 0.00 35.31 2.57
322 323 0.323269 TCAGGAAAATGCGGGCATCA 60.323 50.000 6.61 0.00 35.31 3.07
323 324 0.817013 TTCAGGAAAATGCGGGCATC 59.183 50.000 6.61 0.00 35.31 3.91
324 325 1.488390 ATTCAGGAAAATGCGGGCAT 58.512 45.000 0.00 0.00 38.46 4.40
325 326 1.265236 AATTCAGGAAAATGCGGGCA 58.735 45.000 0.00 0.00 0.00 5.36
326 327 2.385013 AAATTCAGGAAAATGCGGGC 57.615 45.000 0.00 0.00 0.00 6.13
327 328 6.105333 TGAAATAAATTCAGGAAAATGCGGG 58.895 36.000 0.00 0.00 43.08 6.13
339 340 7.881232 ACCGTTAGAAGACCTGAAATAAATTCA 59.119 33.333 0.00 0.00 45.71 2.57
340 341 8.175716 CACCGTTAGAAGACCTGAAATAAATTC 58.824 37.037 0.00 0.00 38.60 2.17
341 342 7.664318 ACACCGTTAGAAGACCTGAAATAAATT 59.336 33.333 0.00 0.00 0.00 1.82
342 343 7.119262 CACACCGTTAGAAGACCTGAAATAAAT 59.881 37.037 0.00 0.00 0.00 1.40
343 344 6.425721 CACACCGTTAGAAGACCTGAAATAAA 59.574 38.462 0.00 0.00 0.00 1.40
344 345 5.929992 CACACCGTTAGAAGACCTGAAATAA 59.070 40.000 0.00 0.00 0.00 1.40
345 346 5.475719 CACACCGTTAGAAGACCTGAAATA 58.524 41.667 0.00 0.00 0.00 1.40
346 347 4.315803 CACACCGTTAGAAGACCTGAAAT 58.684 43.478 0.00 0.00 0.00 2.17
347 348 3.724374 CACACCGTTAGAAGACCTGAAA 58.276 45.455 0.00 0.00 0.00 2.69
348 349 2.547218 GCACACCGTTAGAAGACCTGAA 60.547 50.000 0.00 0.00 0.00 3.02
349 350 1.000506 GCACACCGTTAGAAGACCTGA 59.999 52.381 0.00 0.00 0.00 3.86
350 351 1.270094 TGCACACCGTTAGAAGACCTG 60.270 52.381 0.00 0.00 0.00 4.00
351 352 1.045407 TGCACACCGTTAGAAGACCT 58.955 50.000 0.00 0.00 0.00 3.85
352 353 2.094762 ATGCACACCGTTAGAAGACC 57.905 50.000 0.00 0.00 0.00 3.85
353 354 3.064207 TGAATGCACACCGTTAGAAGAC 58.936 45.455 0.00 0.00 0.00 3.01
354 355 3.244078 ACTGAATGCACACCGTTAGAAGA 60.244 43.478 0.00 0.00 0.00 2.87
355 356 3.067106 ACTGAATGCACACCGTTAGAAG 58.933 45.455 0.00 0.00 0.00 2.85
356 357 3.120321 ACTGAATGCACACCGTTAGAA 57.880 42.857 0.00 0.00 0.00 2.10
357 358 2.831685 ACTGAATGCACACCGTTAGA 57.168 45.000 0.00 0.00 0.00 2.10
358 359 4.242475 TCTTACTGAATGCACACCGTTAG 58.758 43.478 0.00 0.00 0.00 2.34
359 360 4.242475 CTCTTACTGAATGCACACCGTTA 58.758 43.478 0.00 0.00 0.00 3.18
360 361 3.067106 CTCTTACTGAATGCACACCGTT 58.933 45.455 0.00 0.00 0.00 4.44
361 362 2.612972 CCTCTTACTGAATGCACACCGT 60.613 50.000 0.00 0.00 0.00 4.83
362 363 2.002586 CCTCTTACTGAATGCACACCG 58.997 52.381 0.00 0.00 0.00 4.94
363 364 2.359900 CCCTCTTACTGAATGCACACC 58.640 52.381 0.00 0.00 0.00 4.16
364 365 2.027192 TCCCCTCTTACTGAATGCACAC 60.027 50.000 0.00 0.00 0.00 3.82
365 366 2.027192 GTCCCCTCTTACTGAATGCACA 60.027 50.000 0.00 0.00 0.00 4.57
366 367 2.633488 GTCCCCTCTTACTGAATGCAC 58.367 52.381 0.00 0.00 0.00 4.57
367 368 1.207089 CGTCCCCTCTTACTGAATGCA 59.793 52.381 0.00 0.00 0.00 3.96
368 369 1.207329 ACGTCCCCTCTTACTGAATGC 59.793 52.381 0.00 0.00 0.00 3.56
369 370 3.195825 AGAACGTCCCCTCTTACTGAATG 59.804 47.826 0.00 0.00 0.00 2.67
370 371 3.442076 AGAACGTCCCCTCTTACTGAAT 58.558 45.455 0.00 0.00 0.00 2.57
371 372 2.885616 AGAACGTCCCCTCTTACTGAA 58.114 47.619 0.00 0.00 0.00 3.02
372 373 2.599408 AGAACGTCCCCTCTTACTGA 57.401 50.000 0.00 0.00 0.00 3.41
373 374 5.826737 TCTATAAGAACGTCCCCTCTTACTG 59.173 44.000 9.09 6.19 37.06 2.74
374 375 5.827267 GTCTATAAGAACGTCCCCTCTTACT 59.173 44.000 9.09 3.52 37.06 2.24
375 376 5.827267 AGTCTATAAGAACGTCCCCTCTTAC 59.173 44.000 9.09 1.24 37.06 2.34
376 377 6.011122 AGTCTATAAGAACGTCCCCTCTTA 57.989 41.667 9.28 9.28 38.25 2.10
377 378 4.869451 AGTCTATAAGAACGTCCCCTCTT 58.131 43.478 5.61 5.61 35.99 2.85
378 379 4.523168 AGTCTATAAGAACGTCCCCTCT 57.477 45.455 0.00 0.00 0.00 3.69
379 380 4.213059 CGTAGTCTATAAGAACGTCCCCTC 59.787 50.000 0.00 0.00 0.00 4.30
380 381 4.133078 CGTAGTCTATAAGAACGTCCCCT 58.867 47.826 0.00 0.00 0.00 4.79
381 382 4.130118 TCGTAGTCTATAAGAACGTCCCC 58.870 47.826 0.00 0.00 32.16 4.81
382 383 5.277731 CCTTCGTAGTCTATAAGAACGTCCC 60.278 48.000 0.00 0.00 32.16 4.46
383 384 5.746539 CCTTCGTAGTCTATAAGAACGTCC 58.253 45.833 0.00 0.00 32.16 4.79
384 385 5.204101 GCCTTCGTAGTCTATAAGAACGTC 58.796 45.833 0.00 0.00 32.16 4.34
385 386 4.260538 CGCCTTCGTAGTCTATAAGAACGT 60.261 45.833 6.53 0.00 32.16 3.99
386 387 4.209870 CGCCTTCGTAGTCTATAAGAACG 58.790 47.826 6.53 0.00 31.67 3.95
401 402 0.597637 AGTTGTCACAGACGCCTTCG 60.598 55.000 0.00 0.00 42.43 3.79
402 403 1.527311 GAAGTTGTCACAGACGCCTTC 59.473 52.381 10.68 10.68 35.98 3.46
403 404 1.134521 TGAAGTTGTCACAGACGCCTT 60.135 47.619 0.00 0.00 34.95 4.35
404 405 0.464036 TGAAGTTGTCACAGACGCCT 59.536 50.000 0.00 0.00 34.95 5.52
405 406 1.512926 ATGAAGTTGTCACAGACGCC 58.487 50.000 0.00 0.00 39.72 5.68
406 407 4.725556 TTAATGAAGTTGTCACAGACGC 57.274 40.909 0.00 0.00 39.72 5.19
407 408 6.712241 AGATTAATGAAGTTGTCACAGACG 57.288 37.500 0.00 0.00 39.72 4.18
421 422 9.109393 GCCGGCTCATTATATTAAGATTAATGA 57.891 33.333 22.15 12.95 36.23 2.57
422 423 9.113838 AGCCGGCTCATTATATTAAGATTAATG 57.886 33.333 27.08 0.00 35.20 1.90
423 424 9.331282 GAGCCGGCTCATTATATTAAGATTAAT 57.669 33.333 44.10 11.12 42.31 1.40
424 425 8.718102 GAGCCGGCTCATTATATTAAGATTAA 57.282 34.615 44.10 0.00 42.31 1.40
440 441 1.299773 CGAGAGATTGAGCCGGCTC 60.300 63.158 43.07 43.07 43.01 4.70
441 442 2.811101 CGAGAGATTGAGCCGGCT 59.189 61.111 33.48 33.48 0.00 5.52
442 443 2.964389 GCGAGAGATTGAGCCGGC 60.964 66.667 21.89 21.89 0.00 6.13
443 444 1.591059 CTGCGAGAGATTGAGCCGG 60.591 63.158 0.00 0.00 0.00 6.13
444 445 1.591059 CCTGCGAGAGATTGAGCCG 60.591 63.158 0.00 0.00 0.00 5.52
445 446 0.809241 CACCTGCGAGAGATTGAGCC 60.809 60.000 0.00 0.00 0.00 4.70
446 447 1.427592 GCACCTGCGAGAGATTGAGC 61.428 60.000 0.00 0.00 0.00 4.26
447 448 2.675519 GCACCTGCGAGAGATTGAG 58.324 57.895 0.00 0.00 0.00 3.02
448 449 4.919653 GCACCTGCGAGAGATTGA 57.080 55.556 0.00 0.00 0.00 2.57
456 457 7.989226 ATGCACATCATATTAGCACCTGCGA 62.989 44.000 0.00 0.00 38.87 5.10
457 458 5.862466 ATGCACATCATATTAGCACCTGCG 61.862 45.833 0.00 0.00 38.87 5.18
458 459 2.880268 TGCACATCATATTAGCACCTGC 59.120 45.455 0.00 0.00 42.49 4.85
459 460 4.517832 ACATGCACATCATATTAGCACCTG 59.482 41.667 0.00 0.00 38.12 4.00
460 461 4.517832 CACATGCACATCATATTAGCACCT 59.482 41.667 0.00 0.00 38.12 4.00
461 462 4.276678 ACACATGCACATCATATTAGCACC 59.723 41.667 0.00 0.00 38.12 5.01
462 463 5.209977 CACACATGCACATCATATTAGCAC 58.790 41.667 0.00 0.00 38.12 4.40
463 464 5.427036 CACACATGCACATCATATTAGCA 57.573 39.130 0.00 0.00 39.79 3.49
478 479 2.168326 TGGTACACTCTGCACACATG 57.832 50.000 0.00 0.00 0.00 3.21
479 480 2.928801 TTGGTACACTCTGCACACAT 57.071 45.000 0.00 0.00 39.29 3.21
480 481 2.700722 TTTGGTACACTCTGCACACA 57.299 45.000 0.00 0.00 39.29 3.72
499 500 6.822676 TGATTTGCACAGGTTCTTCAATTTTT 59.177 30.769 0.00 0.00 0.00 1.94
500 501 6.347696 TGATTTGCACAGGTTCTTCAATTTT 58.652 32.000 0.00 0.00 0.00 1.82
501 502 5.916318 TGATTTGCACAGGTTCTTCAATTT 58.084 33.333 0.00 0.00 0.00 1.82
502 503 5.534207 TGATTTGCACAGGTTCTTCAATT 57.466 34.783 0.00 0.00 0.00 2.32
503 504 5.534207 TTGATTTGCACAGGTTCTTCAAT 57.466 34.783 0.00 0.00 0.00 2.57
504 505 4.998671 TTGATTTGCACAGGTTCTTCAA 57.001 36.364 0.00 0.00 0.00 2.69
505 506 4.998671 TTTGATTTGCACAGGTTCTTCA 57.001 36.364 0.00 0.00 0.00 3.02
506 507 5.351458 AGTTTTGATTTGCACAGGTTCTTC 58.649 37.500 0.00 0.00 0.00 2.87
507 508 5.343307 AGTTTTGATTTGCACAGGTTCTT 57.657 34.783 0.00 0.00 0.00 2.52
508 509 5.010012 CCTAGTTTTGATTTGCACAGGTTCT 59.990 40.000 0.00 0.00 0.00 3.01
509 510 5.222631 CCTAGTTTTGATTTGCACAGGTTC 58.777 41.667 0.00 0.00 0.00 3.62
510 511 4.501400 GCCTAGTTTTGATTTGCACAGGTT 60.501 41.667 0.00 0.00 0.00 3.50
511 512 3.005791 GCCTAGTTTTGATTTGCACAGGT 59.994 43.478 0.00 0.00 0.00 4.00
512 513 3.578688 GCCTAGTTTTGATTTGCACAGG 58.421 45.455 0.00 0.00 0.00 4.00
513 514 3.005684 TGGCCTAGTTTTGATTTGCACAG 59.994 43.478 3.32 0.00 0.00 3.66
514 515 2.961741 TGGCCTAGTTTTGATTTGCACA 59.038 40.909 3.32 0.00 0.00 4.57
515 516 3.658757 TGGCCTAGTTTTGATTTGCAC 57.341 42.857 3.32 0.00 0.00 4.57
516 517 5.681954 GCATATGGCCTAGTTTTGATTTGCA 60.682 40.000 3.32 0.00 36.11 4.08
517 518 4.746611 GCATATGGCCTAGTTTTGATTTGC 59.253 41.667 3.32 0.00 36.11 3.68
518 519 4.977963 CGCATATGGCCTAGTTTTGATTTG 59.022 41.667 3.32 0.00 40.31 2.32
519 520 4.644685 ACGCATATGGCCTAGTTTTGATTT 59.355 37.500 3.32 0.00 40.31 2.17
520 521 4.036734 CACGCATATGGCCTAGTTTTGATT 59.963 41.667 3.32 0.00 40.31 2.57
521 522 3.565482 CACGCATATGGCCTAGTTTTGAT 59.435 43.478 3.32 0.00 40.31 2.57
522 523 2.942376 CACGCATATGGCCTAGTTTTGA 59.058 45.455 3.32 0.00 40.31 2.69
523 524 2.942376 TCACGCATATGGCCTAGTTTTG 59.058 45.455 3.32 0.00 40.31 2.44
524 525 3.275617 TCACGCATATGGCCTAGTTTT 57.724 42.857 3.32 0.00 40.31 2.43
525 526 3.275617 TTCACGCATATGGCCTAGTTT 57.724 42.857 3.32 0.00 40.31 2.66
526 527 3.118408 TCTTTCACGCATATGGCCTAGTT 60.118 43.478 3.32 0.00 40.31 2.24
527 528 2.434336 TCTTTCACGCATATGGCCTAGT 59.566 45.455 3.32 0.00 40.31 2.57
528 529 3.111853 TCTTTCACGCATATGGCCTAG 57.888 47.619 3.32 0.00 40.31 3.02
529 530 3.552132 TTCTTTCACGCATATGGCCTA 57.448 42.857 3.32 0.00 40.31 3.93
530 531 2.418368 TTCTTTCACGCATATGGCCT 57.582 45.000 3.32 0.00 40.31 5.19
531 532 3.502191 TTTTCTTTCACGCATATGGCC 57.498 42.857 4.56 0.00 40.31 5.36
532 533 4.233789 TGTTTTTCTTTCACGCATATGGC 58.766 39.130 4.56 0.00 39.90 4.40
533 534 6.585702 TGATTGTTTTTCTTTCACGCATATGG 59.414 34.615 4.56 0.00 0.00 2.74
534 535 7.565450 TGATTGTTTTTCTTTCACGCATATG 57.435 32.000 0.00 0.00 0.00 1.78
535 536 8.761575 AATGATTGTTTTTCTTTCACGCATAT 57.238 26.923 0.00 0.00 0.00 1.78
536 537 8.586570 AAATGATTGTTTTTCTTTCACGCATA 57.413 26.923 0.00 0.00 0.00 3.14
537 538 7.481275 AAATGATTGTTTTTCTTTCACGCAT 57.519 28.000 0.00 0.00 0.00 4.73
538 539 6.900568 AAATGATTGTTTTTCTTTCACGCA 57.099 29.167 0.00 0.00 0.00 5.24
560 561 3.577649 TTTGCAGTTGTCGACCAAAAA 57.422 38.095 14.12 0.00 34.07 1.94
561 562 3.791973 ATTTGCAGTTGTCGACCAAAA 57.208 38.095 14.12 5.15 34.07 2.44
562 563 3.791973 AATTTGCAGTTGTCGACCAAA 57.208 38.095 14.12 15.22 34.07 3.28
563 564 3.129462 TGAAATTTGCAGTTGTCGACCAA 59.871 39.130 14.12 6.59 0.00 3.67
564 565 2.685388 TGAAATTTGCAGTTGTCGACCA 59.315 40.909 14.12 0.00 0.00 4.02
565 566 3.347958 TGAAATTTGCAGTTGTCGACC 57.652 42.857 14.12 0.00 0.00 4.79
566 567 3.670055 CCATGAAATTTGCAGTTGTCGAC 59.330 43.478 9.11 9.11 0.00 4.20
567 568 3.305267 CCCATGAAATTTGCAGTTGTCGA 60.305 43.478 0.00 0.00 0.00 4.20
568 569 2.988493 CCCATGAAATTTGCAGTTGTCG 59.012 45.455 0.00 0.00 0.00 4.35
569 570 4.255833 TCCCATGAAATTTGCAGTTGTC 57.744 40.909 0.00 0.00 0.00 3.18
570 571 4.686191 TTCCCATGAAATTTGCAGTTGT 57.314 36.364 0.00 0.00 0.00 3.32
581 582 7.235079 TCTAACTGGTGTAATTTCCCATGAAA 58.765 34.615 0.00 0.00 44.22 2.69
582 583 6.785076 TCTAACTGGTGTAATTTCCCATGAA 58.215 36.000 0.00 0.00 0.00 2.57
583 584 6.381498 TCTAACTGGTGTAATTTCCCATGA 57.619 37.500 0.00 0.00 0.00 3.07
584 585 6.404734 GCTTCTAACTGGTGTAATTTCCCATG 60.405 42.308 0.00 0.00 0.00 3.66
585 586 5.652452 GCTTCTAACTGGTGTAATTTCCCAT 59.348 40.000 0.00 0.00 0.00 4.00
586 587 5.007682 GCTTCTAACTGGTGTAATTTCCCA 58.992 41.667 0.00 0.00 0.00 4.37
587 588 5.007682 TGCTTCTAACTGGTGTAATTTCCC 58.992 41.667 0.00 0.00 0.00 3.97
588 589 5.472137 TGTGCTTCTAACTGGTGTAATTTCC 59.528 40.000 0.00 0.00 0.00 3.13
589 590 6.554334 TGTGCTTCTAACTGGTGTAATTTC 57.446 37.500 0.00 0.00 0.00 2.17
590 591 6.515035 GCTTGTGCTTCTAACTGGTGTAATTT 60.515 38.462 0.00 0.00 36.03 1.82
591 592 5.048713 GCTTGTGCTTCTAACTGGTGTAATT 60.049 40.000 0.00 0.00 36.03 1.40
592 593 4.455877 GCTTGTGCTTCTAACTGGTGTAAT 59.544 41.667 0.00 0.00 36.03 1.89
593 594 3.813166 GCTTGTGCTTCTAACTGGTGTAA 59.187 43.478 0.00 0.00 36.03 2.41
594 595 3.399330 GCTTGTGCTTCTAACTGGTGTA 58.601 45.455 0.00 0.00 36.03 2.90
595 596 2.222027 GCTTGTGCTTCTAACTGGTGT 58.778 47.619 0.00 0.00 36.03 4.16
596 597 2.977405 GCTTGTGCTTCTAACTGGTG 57.023 50.000 0.00 0.00 36.03 4.17
614 615 5.415701 TCCAATATTGTCAGGTCTTTTGAGC 59.584 40.000 14.25 0.00 46.50 4.26
615 616 6.881065 TCTCCAATATTGTCAGGTCTTTTGAG 59.119 38.462 14.25 8.65 0.00 3.02
616 617 6.778821 TCTCCAATATTGTCAGGTCTTTTGA 58.221 36.000 14.25 0.00 0.00 2.69
617 618 7.415989 CCATCTCCAATATTGTCAGGTCTTTTG 60.416 40.741 14.25 0.00 0.00 2.44
618 619 6.604795 CCATCTCCAATATTGTCAGGTCTTTT 59.395 38.462 14.25 0.00 0.00 2.27
619 620 6.069440 TCCATCTCCAATATTGTCAGGTCTTT 60.069 38.462 14.25 0.00 0.00 2.52
620 621 5.429762 TCCATCTCCAATATTGTCAGGTCTT 59.570 40.000 14.25 0.00 0.00 3.01
621 622 4.971282 TCCATCTCCAATATTGTCAGGTCT 59.029 41.667 14.25 0.00 0.00 3.85
622 623 5.296151 TCCATCTCCAATATTGTCAGGTC 57.704 43.478 14.25 0.00 0.00 3.85
623 624 5.919348 ATCCATCTCCAATATTGTCAGGT 57.081 39.130 14.25 3.45 0.00 4.00
624 625 6.013032 AGGTATCCATCTCCAATATTGTCAGG 60.013 42.308 14.25 8.55 0.00 3.86
625 626 7.013823 AGGTATCCATCTCCAATATTGTCAG 57.986 40.000 14.25 9.50 0.00 3.51
626 627 8.504811 TTAGGTATCCATCTCCAATATTGTCA 57.495 34.615 14.25 0.00 0.00 3.58
627 628 8.043710 CCTTAGGTATCCATCTCCAATATTGTC 58.956 40.741 14.25 0.00 0.00 3.18
628 629 7.517604 ACCTTAGGTATCCATCTCCAATATTGT 59.482 37.037 14.25 0.00 32.11 2.71
629 630 7.826252 CACCTTAGGTATCCATCTCCAATATTG 59.174 40.741 2.52 8.58 32.11 1.90
630 631 7.037297 CCACCTTAGGTATCCATCTCCAATATT 60.037 40.741 2.52 0.00 32.11 1.28
631 632 6.445139 CCACCTTAGGTATCCATCTCCAATAT 59.555 42.308 2.52 0.00 32.11 1.28
632 633 5.785423 CCACCTTAGGTATCCATCTCCAATA 59.215 44.000 2.52 0.00 32.11 1.90
633 634 4.599241 CCACCTTAGGTATCCATCTCCAAT 59.401 45.833 2.52 0.00 32.11 3.16
634 635 3.973973 CCACCTTAGGTATCCATCTCCAA 59.026 47.826 2.52 0.00 32.11 3.53
635 636 3.587498 CCACCTTAGGTATCCATCTCCA 58.413 50.000 2.52 0.00 32.11 3.86
636 637 2.303311 GCCACCTTAGGTATCCATCTCC 59.697 54.545 2.52 0.00 32.11 3.71
637 638 3.243724 AGCCACCTTAGGTATCCATCTC 58.756 50.000 2.52 0.00 32.11 2.75
638 639 3.352611 AGCCACCTTAGGTATCCATCT 57.647 47.619 2.52 0.00 32.11 2.90
639 640 3.496870 CCAAGCCACCTTAGGTATCCATC 60.497 52.174 2.52 0.00 32.11 3.51
640 641 2.443255 CCAAGCCACCTTAGGTATCCAT 59.557 50.000 2.52 0.00 32.11 3.41
641 642 1.843851 CCAAGCCACCTTAGGTATCCA 59.156 52.381 2.52 0.00 32.11 3.41
642 643 1.477014 GCCAAGCCACCTTAGGTATCC 60.477 57.143 2.52 0.00 32.11 2.59
643 644 1.211949 TGCCAAGCCACCTTAGGTATC 59.788 52.381 2.52 0.00 32.11 2.24
644 645 1.295020 TGCCAAGCCACCTTAGGTAT 58.705 50.000 2.52 0.00 32.11 2.73
645 646 1.295020 ATGCCAAGCCACCTTAGGTA 58.705 50.000 2.52 0.00 32.11 3.08
646 647 1.295020 TATGCCAAGCCACCTTAGGT 58.705 50.000 0.00 0.00 35.62 3.08
647 648 2.435372 TTATGCCAAGCCACCTTAGG 57.565 50.000 0.00 0.00 0.00 2.69
648 649 4.799564 TTTTTATGCCAAGCCACCTTAG 57.200 40.909 0.00 0.00 0.00 2.18
670 671 9.895138 ACTACAGTAAATAACCGTTGGAAATAT 57.105 29.630 0.00 0.00 0.00 1.28
672 673 9.895138 ATACTACAGTAAATAACCGTTGGAAAT 57.105 29.630 0.00 0.00 33.76 2.17
673 674 9.723601 AATACTACAGTAAATAACCGTTGGAAA 57.276 29.630 0.00 0.00 33.76 3.13
676 677 9.807649 ACTAATACTACAGTAAATAACCGTTGG 57.192 33.333 0.00 0.00 33.76 3.77
678 679 9.305925 GCACTAATACTACAGTAAATAACCGTT 57.694 33.333 0.00 0.00 33.76 4.44
679 680 8.689972 AGCACTAATACTACAGTAAATAACCGT 58.310 33.333 0.00 0.00 33.76 4.83
680 681 9.525409 AAGCACTAATACTACAGTAAATAACCG 57.475 33.333 0.00 0.00 33.76 4.44
730 731 9.529325 GCACATACACTCACTTCTATTACAATA 57.471 33.333 0.00 0.00 0.00 1.90
731 732 7.222805 CGCACATACACTCACTTCTATTACAAT 59.777 37.037 0.00 0.00 0.00 2.71
732 733 6.530181 CGCACATACACTCACTTCTATTACAA 59.470 38.462 0.00 0.00 0.00 2.41
733 734 6.033966 CGCACATACACTCACTTCTATTACA 58.966 40.000 0.00 0.00 0.00 2.41
734 735 6.034591 ACGCACATACACTCACTTCTATTAC 58.965 40.000 0.00 0.00 0.00 1.89
735 736 6.203808 ACGCACATACACTCACTTCTATTA 57.796 37.500 0.00 0.00 0.00 0.98
736 737 5.073311 ACGCACATACACTCACTTCTATT 57.927 39.130 0.00 0.00 0.00 1.73
737 738 4.720649 ACGCACATACACTCACTTCTAT 57.279 40.909 0.00 0.00 0.00 1.98
738 739 5.124936 ACATACGCACATACACTCACTTCTA 59.875 40.000 0.00 0.00 0.00 2.10
739 740 4.082190 ACATACGCACATACACTCACTTCT 60.082 41.667 0.00 0.00 0.00 2.85
740 741 4.174009 ACATACGCACATACACTCACTTC 58.826 43.478 0.00 0.00 0.00 3.01
741 742 4.188247 ACATACGCACATACACTCACTT 57.812 40.909 0.00 0.00 0.00 3.16
742 743 3.868757 ACATACGCACATACACTCACT 57.131 42.857 0.00 0.00 0.00 3.41
743 744 6.436261 AGTATACATACGCACATACACTCAC 58.564 40.000 5.50 0.00 38.28 3.51
744 745 6.628919 AGTATACATACGCACATACACTCA 57.371 37.500 5.50 0.00 38.28 3.41
745 746 6.302549 CGAAGTATACATACGCACATACACTC 59.697 42.308 5.50 0.00 38.28 3.51
746 747 6.140786 CGAAGTATACATACGCACATACACT 58.859 40.000 5.50 0.00 38.28 3.55
747 748 5.911280 ACGAAGTATACATACGCACATACAC 59.089 40.000 5.50 0.00 41.94 2.90
748 749 6.063640 ACGAAGTATACATACGCACATACA 57.936 37.500 5.50 0.00 41.94 2.29
782 783 5.180492 TCGTGATTCCAATAACGCTCTTTTT 59.820 36.000 4.52 0.00 41.89 1.94
783 784 4.693566 TCGTGATTCCAATAACGCTCTTTT 59.306 37.500 4.52 0.00 41.89 2.27
784 785 4.250464 TCGTGATTCCAATAACGCTCTTT 58.750 39.130 4.52 0.00 41.89 2.52
785 786 3.857052 TCGTGATTCCAATAACGCTCTT 58.143 40.909 4.52 0.00 41.89 2.85
786 787 3.520290 TCGTGATTCCAATAACGCTCT 57.480 42.857 4.52 0.00 41.89 4.09
787 788 4.795970 AATCGTGATTCCAATAACGCTC 57.204 40.909 4.52 0.00 41.89 5.03
788 789 5.560966 AAAATCGTGATTCCAATAACGCT 57.439 34.783 4.52 0.00 41.89 5.07
789 790 5.053286 CGAAAAATCGTGATTCCAATAACGC 60.053 40.000 4.52 0.00 41.89 4.84
790 791 6.019152 ACGAAAAATCGTGATTCCAATAACG 58.981 36.000 2.72 3.11 45.30 3.18
804 805 5.725110 AATGAGATCCAGACGAAAAATCG 57.275 39.130 0.00 0.00 39.31 3.34
805 806 9.657121 GAAATAATGAGATCCAGACGAAAAATC 57.343 33.333 0.00 0.00 0.00 2.17
806 807 8.624776 GGAAATAATGAGATCCAGACGAAAAAT 58.375 33.333 0.00 0.00 32.08 1.82
807 808 7.609918 TGGAAATAATGAGATCCAGACGAAAAA 59.390 33.333 0.00 0.00 37.05 1.94
808 809 7.109501 TGGAAATAATGAGATCCAGACGAAAA 58.890 34.615 0.00 0.00 37.05 2.29
809 810 6.649155 TGGAAATAATGAGATCCAGACGAAA 58.351 36.000 0.00 0.00 37.05 3.46
810 811 6.233905 TGGAAATAATGAGATCCAGACGAA 57.766 37.500 0.00 0.00 37.05 3.85
811 812 5.869649 TGGAAATAATGAGATCCAGACGA 57.130 39.130 0.00 0.00 37.05 4.20
812 813 5.050769 CGTTGGAAATAATGAGATCCAGACG 60.051 44.000 11.14 11.14 42.55 4.18
845 846 7.987268 AAAGTTCGAAGATTGTTTTCCTTTC 57.013 32.000 0.00 0.00 35.04 2.62
857 859 6.350194 GGGCTGGAAAAATAAAGTTCGAAGAT 60.350 38.462 0.00 0.00 35.04 2.40
871 873 1.303317 GAGGCGAGGGCTGGAAAAA 60.303 57.895 0.00 0.00 38.98 1.94
1065 1073 2.438434 GAAGGGGATGCGGTGTGG 60.438 66.667 0.00 0.00 0.00 4.17
1146 1154 4.741239 GGGAGGAGGGTGGGCAGA 62.741 72.222 0.00 0.00 0.00 4.26
1344 1719 4.083600 GCGTCGAACATTGCGGCA 62.084 61.111 0.00 0.00 31.91 5.69
1617 1992 2.882761 CCCATCCATGAGCACATTGTAG 59.117 50.000 0.00 0.00 34.15 2.74
1641 2016 3.518068 GCCATGCCCCGCTTACAC 61.518 66.667 0.00 0.00 0.00 2.90
1737 2112 2.280797 GCACTGCACAGGGACGAA 60.281 61.111 3.54 0.00 32.29 3.85
2178 2553 2.912956 TGACTGAGCCTTATCCAGGTTT 59.087 45.455 0.00 0.00 46.07 3.27
2264 2639 2.107204 AGTCCTTTCTTGCACAGTCCAT 59.893 45.455 0.00 0.00 0.00 3.41
2563 2938 6.461231 GGAACAACTCCGCTGTCTATTATACT 60.461 42.308 0.00 0.00 33.37 2.12
2774 3149 0.823356 ACCATGACCCCGCAATATGC 60.823 55.000 0.00 0.00 40.69 3.14
3665 4041 3.181437 TGATGCACCATATTCCAGATGCT 60.181 43.478 0.00 0.00 34.18 3.79
3814 4190 5.616270 TCAAAGGCAGTACAATACAACAGA 58.384 37.500 0.00 0.00 0.00 3.41
3900 4276 2.056577 CAACCTCGTTCGGTCAAGTAC 58.943 52.381 0.00 0.00 35.89 2.73
3956 4332 7.801716 ACAAGAAAGCTAATTGTAAGTGTCA 57.198 32.000 8.82 0.00 35.47 3.58
4016 4413 5.641777 TCGCGAGAAAAATATGATGTCAG 57.358 39.130 3.71 0.00 37.03 3.51
4032 4429 4.606457 ATTCCAAGATTTTCTTCGCGAG 57.394 40.909 9.59 3.89 33.78 5.03
4037 4434 9.962783 CATATCTCCAATTCCAAGATTTTCTTC 57.037 33.333 0.00 0.00 33.78 2.87
4139 4536 7.360776 GCTTTCTTCTCACTAGACCATTCAAAG 60.361 40.741 0.00 0.00 0.00 2.77
4153 4550 5.424121 TGCTTAAGTTGCTTTCTTCTCAC 57.576 39.130 4.02 0.00 0.00 3.51
4155 4552 7.936950 ATTTTGCTTAAGTTGCTTTCTTCTC 57.063 32.000 4.02 0.00 0.00 2.87
4321 4718 7.340232 GGACATTATGTTATGCCATCCACATAT 59.660 37.037 0.00 0.00 33.25 1.78
4328 4725 6.262944 TGACAAGGACATTATGTTATGCCATC 59.737 38.462 0.00 0.00 0.00 3.51
4332 4729 6.095440 AGGTTGACAAGGACATTATGTTATGC 59.905 38.462 0.00 0.00 0.00 3.14
4400 4797 9.057089 CCTGGTAACCTCATTTACTTCATATTC 57.943 37.037 0.00 0.00 33.21 1.75
4596 4993 2.125147 CGCTCCAGATCGGCCAAA 60.125 61.111 2.24 0.00 33.14 3.28
4672 5069 6.582677 ATCTCTAGATACATCCGTTTGAGG 57.417 41.667 0.00 0.00 32.01 3.86
4709 5120 4.322801 CCCTCCGATCCATATTACTTGTCC 60.323 50.000 0.00 0.00 0.00 4.02
4878 5290 8.597167 TCTCCATGAAAAGTGGATATATCGAAT 58.403 33.333 6.64 0.00 44.34 3.34
5093 5514 7.145932 ACCATAGCTCTTAAATGTGTTTGAC 57.854 36.000 0.00 0.00 0.00 3.18
5193 5700 0.767998 TGAGTGCACCCATACCAACA 59.232 50.000 14.63 0.00 0.00 3.33
5232 5739 7.439655 GTGGTAATTCTGGAATCATAGTCACTC 59.560 40.741 0.00 0.00 0.00 3.51
5233 5740 7.092891 TGTGGTAATTCTGGAATCATAGTCACT 60.093 37.037 0.00 0.00 0.00 3.41
5234 5741 7.047891 TGTGGTAATTCTGGAATCATAGTCAC 58.952 38.462 0.00 0.00 0.00 3.67
5268 5776 9.715121 AACATATCTGAAATGCAAACAATTTCT 57.285 25.926 10.24 0.00 35.84 2.52
5327 5836 3.368248 AGGCCCATTACGTACTCTAACA 58.632 45.455 0.00 0.00 0.00 2.41
5328 5837 5.520376 TTAGGCCCATTACGTACTCTAAC 57.480 43.478 0.00 0.00 0.00 2.34
5329 5838 5.011329 CCATTAGGCCCATTACGTACTCTAA 59.989 44.000 0.00 0.00 0.00 2.10
5330 5839 4.525487 CCATTAGGCCCATTACGTACTCTA 59.475 45.833 0.00 0.00 0.00 2.43
5331 5840 3.323979 CCATTAGGCCCATTACGTACTCT 59.676 47.826 0.00 0.00 0.00 3.24
5332 5841 3.556423 CCCATTAGGCCCATTACGTACTC 60.556 52.174 0.00 0.00 0.00 2.59
5333 5842 2.370849 CCCATTAGGCCCATTACGTACT 59.629 50.000 0.00 0.00 0.00 2.73
5334 5843 2.774687 CCCATTAGGCCCATTACGTAC 58.225 52.381 0.00 0.00 0.00 3.67
5348 5857 3.655777 CCCTAAGACTAATGGGCCCATTA 59.344 47.826 41.63 41.63 43.92 1.90
5349 5858 2.447047 CCCTAAGACTAATGGGCCCATT 59.553 50.000 43.64 43.64 46.85 3.16
5350 5859 2.065799 CCCTAAGACTAATGGGCCCAT 58.934 52.381 32.75 32.75 38.46 4.00
5351 5860 1.274767 ACCCTAAGACTAATGGGCCCA 60.275 52.381 30.92 30.92 43.25 5.36
5352 5861 1.519498 ACCCTAAGACTAATGGGCCC 58.481 55.000 17.59 17.59 43.25 5.80
5353 5862 4.783560 TTAACCCTAAGACTAATGGGCC 57.216 45.455 0.00 0.00 43.25 5.80
5354 5863 7.742767 TCTAATTAACCCTAAGACTAATGGGC 58.257 38.462 7.12 0.00 43.25 5.36
5355 5864 9.155785 TCTCTAATTAACCCTAAGACTAATGGG 57.844 37.037 0.00 0.00 44.89 4.00
5361 5870 9.382307 CCCTTATCTCTAATTAACCCTAAGACT 57.618 37.037 0.00 0.00 0.00 3.24
5362 5871 9.156940 ACCCTTATCTCTAATTAACCCTAAGAC 57.843 37.037 0.00 0.00 0.00 3.01
5363 5872 9.377238 GACCCTTATCTCTAATTAACCCTAAGA 57.623 37.037 0.00 0.00 0.00 2.10
5364 5873 8.305317 CGACCCTTATCTCTAATTAACCCTAAG 58.695 40.741 0.00 0.00 0.00 2.18
5365 5874 7.256083 GCGACCCTTATCTCTAATTAACCCTAA 60.256 40.741 0.00 0.00 0.00 2.69
5366 5875 6.210185 GCGACCCTTATCTCTAATTAACCCTA 59.790 42.308 0.00 0.00 0.00 3.53
5367 5876 5.011840 GCGACCCTTATCTCTAATTAACCCT 59.988 44.000 0.00 0.00 0.00 4.34
5368 5877 5.011840 AGCGACCCTTATCTCTAATTAACCC 59.988 44.000 0.00 0.00 0.00 4.11
5369 5878 6.099159 AGCGACCCTTATCTCTAATTAACC 57.901 41.667 0.00 0.00 0.00 2.85
5370 5879 6.985059 ACAAGCGACCCTTATCTCTAATTAAC 59.015 38.462 0.00 0.00 31.00 2.01
5371 5880 7.120923 ACAAGCGACCCTTATCTCTAATTAA 57.879 36.000 0.00 0.00 31.00 1.40
5372 5881 6.726490 ACAAGCGACCCTTATCTCTAATTA 57.274 37.500 0.00 0.00 31.00 1.40
5373 5882 5.615925 ACAAGCGACCCTTATCTCTAATT 57.384 39.130 0.00 0.00 31.00 1.40
5374 5883 5.615925 AACAAGCGACCCTTATCTCTAAT 57.384 39.130 0.00 0.00 31.00 1.73
5375 5884 5.416271 AAACAAGCGACCCTTATCTCTAA 57.584 39.130 0.00 0.00 31.00 2.10
5376 5885 6.145338 CTAAACAAGCGACCCTTATCTCTA 57.855 41.667 0.00 0.00 31.00 2.43
5377 5886 3.983044 AAACAAGCGACCCTTATCTCT 57.017 42.857 0.00 0.00 31.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.