Multiple sequence alignment - TraesCS5B01G156600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G156600 chr5B 100.000 2638 0 0 1 2638 289146297 289143660 0.000000e+00 4872.0
1 TraesCS5B01G156600 chr5B 86.905 84 10 1 399 481 370274907 370274990 2.800000e-15 93.5
2 TraesCS5B01G156600 chr5B 86.047 86 11 1 399 483 33986128 33986213 1.010000e-14 91.6
3 TraesCS5B01G156600 chr5A 93.983 2177 102 13 475 2633 338557800 338559965 0.000000e+00 3267.0
4 TraesCS5B01G156600 chr5A 96.259 294 11 0 104 397 338557511 338557804 1.420000e-132 483.0
5 TraesCS5B01G156600 chr5A 98.077 104 2 0 1 104 338547899 338548002 5.800000e-42 182.0
6 TraesCS5B01G156600 chr5D 90.821 926 43 22 752 1669 255474698 255475589 0.000000e+00 1201.0
7 TraesCS5B01G156600 chr5D 86.610 351 40 6 1765 2113 384197504 384197849 5.330000e-102 381.0
8 TraesCS5B01G156600 chr5D 83.105 438 37 20 2226 2638 255475631 255476056 5.370000e-97 364.0
9 TraesCS5B01G156600 chr1B 88.991 327 33 2 1778 2103 129138934 129139258 4.090000e-108 401.0
10 TraesCS5B01G156600 chr1B 94.203 69 4 0 399 467 474683025 474683093 3.590000e-19 106.0
11 TraesCS5B01G156600 chr1B 90.909 77 7 0 399 475 132283156 132283232 1.290000e-18 104.0
12 TraesCS5B01G156600 chr3D 87.356 348 40 3 1766 2113 590229081 590228738 1.900000e-106 396.0
13 TraesCS5B01G156600 chr1D 87.393 349 39 4 1766 2113 75891238 75890894 1.900000e-106 396.0
14 TraesCS5B01G156600 chr1D 91.765 85 6 1 399 482 58438869 58438785 1.660000e-22 117.0
15 TraesCS5B01G156600 chr4A 86.782 348 43 2 1766 2113 597743187 597742843 4.120000e-103 385.0
16 TraesCS5B01G156600 chr7D 85.714 371 43 7 1743 2108 228974758 228974393 1.480000e-102 383.0
17 TraesCS5B01G156600 chr7B 86.533 349 43 4 1766 2113 615788522 615788177 5.330000e-102 381.0
18 TraesCS5B01G156600 chr4B 86.494 348 44 2 1766 2113 450912546 450912890 1.920000e-101 379.0
19 TraesCS5B01G156600 chr2B 86.517 89 9 3 396 482 226474733 226474820 7.770000e-16 95.3
20 TraesCS5B01G156600 chr2B 88.312 77 9 0 399 475 7854978 7855054 2.800000e-15 93.5
21 TraesCS5B01G156600 chrUn 85.366 82 12 0 394 475 85399375 85399294 4.680000e-13 86.1
22 TraesCS5B01G156600 chrUn 85.366 82 12 0 394 475 242417750 242417831 4.680000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G156600 chr5B 289143660 289146297 2637 True 4872.0 4872 100.000 1 2638 1 chr5B.!!$R1 2637
1 TraesCS5B01G156600 chr5A 338557511 338559965 2454 False 1875.0 3267 95.121 104 2633 2 chr5A.!!$F2 2529
2 TraesCS5B01G156600 chr5D 255474698 255476056 1358 False 782.5 1201 86.963 752 2638 2 chr5D.!!$F2 1886

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 961 0.034186 AAATGGATTCAGGAGGCGCA 60.034 50.0 10.83 0.0 0.0 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1862 1877 0.380378 TCGCACAAGGCACAGAAAAC 59.62 50.0 0.0 0.0 45.17 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.920160 TGCACTATGAATAGATTGTGTTTGA 57.080 32.000 4.34 0.00 33.29 2.69
25 26 8.334263 TGCACTATGAATAGATTGTGTTTGAA 57.666 30.769 4.34 0.00 33.29 2.69
26 27 8.959548 TGCACTATGAATAGATTGTGTTTGAAT 58.040 29.630 4.34 0.00 33.29 2.57
27 28 9.229784 GCACTATGAATAGATTGTGTTTGAATG 57.770 33.333 4.34 0.00 33.29 2.67
28 29 9.229784 CACTATGAATAGATTGTGTTTGAATGC 57.770 33.333 4.34 0.00 34.50 3.56
29 30 8.959548 ACTATGAATAGATTGTGTTTGAATGCA 58.040 29.630 4.34 0.00 34.50 3.96
30 31 9.961265 CTATGAATAGATTGTGTTTGAATGCAT 57.039 29.630 0.00 0.00 32.05 3.96
31 32 8.642908 ATGAATAGATTGTGTTTGAATGCATG 57.357 30.769 0.00 0.00 0.00 4.06
32 33 7.036829 TGAATAGATTGTGTTTGAATGCATGG 58.963 34.615 0.00 0.00 0.00 3.66
33 34 4.877378 AGATTGTGTTTGAATGCATGGT 57.123 36.364 0.00 0.00 0.00 3.55
34 35 4.562082 AGATTGTGTTTGAATGCATGGTG 58.438 39.130 0.00 0.00 0.00 4.17
35 36 2.151881 TGTGTTTGAATGCATGGTGC 57.848 45.000 0.00 0.00 45.29 5.01
53 54 2.336554 GCACATGGCAGTAAAGTGTG 57.663 50.000 11.32 11.32 43.97 3.82
54 55 1.879380 GCACATGGCAGTAAAGTGTGA 59.121 47.619 18.09 0.00 41.93 3.58
55 56 2.095567 GCACATGGCAGTAAAGTGTGAG 60.096 50.000 18.09 0.00 41.93 3.51
56 57 2.485426 CACATGGCAGTAAAGTGTGAGG 59.515 50.000 10.36 0.00 41.93 3.86
57 58 2.371841 ACATGGCAGTAAAGTGTGAGGA 59.628 45.455 0.00 0.00 0.00 3.71
58 59 2.839486 TGGCAGTAAAGTGTGAGGAG 57.161 50.000 0.00 0.00 0.00 3.69
59 60 1.270839 TGGCAGTAAAGTGTGAGGAGC 60.271 52.381 0.00 0.00 0.00 4.70
60 61 1.002544 GGCAGTAAAGTGTGAGGAGCT 59.997 52.381 0.00 0.00 0.00 4.09
61 62 2.342179 GCAGTAAAGTGTGAGGAGCTC 58.658 52.381 4.71 4.71 0.00 4.09
62 63 2.933056 GCAGTAAAGTGTGAGGAGCTCC 60.933 54.545 26.22 26.22 0.00 4.70
63 64 1.903183 AGTAAAGTGTGAGGAGCTCCC 59.097 52.381 29.54 20.23 36.42 4.30
64 65 1.066071 GTAAAGTGTGAGGAGCTCCCC 60.066 57.143 29.54 19.35 36.42 4.81
65 66 0.768221 AAAGTGTGAGGAGCTCCCCA 60.768 55.000 29.54 22.19 36.42 4.96
66 67 0.768221 AAGTGTGAGGAGCTCCCCAA 60.768 55.000 29.54 12.39 36.42 4.12
67 68 0.768221 AGTGTGAGGAGCTCCCCAAA 60.768 55.000 29.54 17.09 36.42 3.28
68 69 0.329596 GTGTGAGGAGCTCCCCAAAT 59.670 55.000 29.54 10.52 36.42 2.32
69 70 1.559682 GTGTGAGGAGCTCCCCAAATA 59.440 52.381 29.54 10.88 36.42 1.40
70 71 2.173569 GTGTGAGGAGCTCCCCAAATAT 59.826 50.000 29.54 8.83 36.42 1.28
71 72 2.439507 TGTGAGGAGCTCCCCAAATATC 59.560 50.000 29.54 18.04 36.42 1.63
72 73 2.057922 TGAGGAGCTCCCCAAATATCC 58.942 52.381 29.54 0.51 36.42 2.59
73 74 2.343625 GAGGAGCTCCCCAAATATCCT 58.656 52.381 29.54 6.31 39.85 3.24
74 75 2.039613 GAGGAGCTCCCCAAATATCCTG 59.960 54.545 29.54 0.00 37.30 3.86
75 76 1.546548 GGAGCTCCCCAAATATCCTGC 60.547 57.143 23.19 0.00 0.00 4.85
76 77 1.143684 GAGCTCCCCAAATATCCTGCA 59.856 52.381 0.87 0.00 0.00 4.41
77 78 1.785208 AGCTCCCCAAATATCCTGCAT 59.215 47.619 0.00 0.00 0.00 3.96
78 79 2.178544 AGCTCCCCAAATATCCTGCATT 59.821 45.455 0.00 0.00 0.00 3.56
79 80 2.298163 GCTCCCCAAATATCCTGCATTG 59.702 50.000 0.00 0.00 0.00 2.82
80 81 2.298163 CTCCCCAAATATCCTGCATTGC 59.702 50.000 0.46 0.46 0.00 3.56
81 82 1.000060 CCCCAAATATCCTGCATTGCG 60.000 52.381 3.84 0.00 0.00 4.85
82 83 1.682854 CCCAAATATCCTGCATTGCGT 59.317 47.619 3.84 0.00 0.00 5.24
83 84 2.544277 CCCAAATATCCTGCATTGCGTG 60.544 50.000 3.84 0.00 0.00 5.34
94 95 3.989705 GCATTGCGTGCGTATATATCA 57.010 42.857 0.00 0.00 45.23 2.15
95 96 4.520743 GCATTGCGTGCGTATATATCAT 57.479 40.909 0.00 0.00 45.23 2.45
96 97 4.266157 GCATTGCGTGCGTATATATCATG 58.734 43.478 0.00 0.00 45.23 3.07
97 98 4.032786 GCATTGCGTGCGTATATATCATGA 59.967 41.667 0.00 0.00 45.23 3.07
98 99 5.445806 GCATTGCGTGCGTATATATCATGAA 60.446 40.000 0.00 0.00 45.23 2.57
99 100 5.761818 TTGCGTGCGTATATATCATGAAG 57.238 39.130 0.00 0.00 0.00 3.02
100 101 5.054390 TGCGTGCGTATATATCATGAAGA 57.946 39.130 0.00 0.00 0.00 2.87
101 102 5.465935 TGCGTGCGTATATATCATGAAGAA 58.534 37.500 0.00 0.00 0.00 2.52
102 103 6.099341 TGCGTGCGTATATATCATGAAGAAT 58.901 36.000 0.00 0.00 0.00 2.40
199 200 0.596600 GACGGTTGAAGCACTCGTCA 60.597 55.000 8.92 0.00 46.23 4.35
216 217 5.066634 ACTCGTCAGTGTAGAATATGTCCAG 59.933 44.000 0.00 0.00 0.00 3.86
232 233 3.244215 TGTCCAGCCTTGCATATAGTAGC 60.244 47.826 0.00 0.00 0.00 3.58
250 251 2.693069 AGCGGATCAAGTTGAACTCAG 58.307 47.619 10.14 5.99 0.00 3.35
292 293 3.297134 TCTTGGACCAAGCAAAGAACT 57.703 42.857 26.79 0.00 40.84 3.01
378 379 0.908198 AGGTCTGACAGAGGCATTCC 59.092 55.000 5.10 2.28 0.00 3.01
381 382 1.153289 CTGACAGAGGCATTCCCGG 60.153 63.158 0.00 0.00 39.21 5.73
388 389 0.526211 GAGGCATTCCCGGTTGTTTC 59.474 55.000 0.00 0.00 39.21 2.78
394 395 3.057174 GCATTCCCGGTTGTTTCAATGTA 60.057 43.478 0.00 0.00 0.00 2.29
395 396 4.732784 CATTCCCGGTTGTTTCAATGTAG 58.267 43.478 0.00 0.00 0.00 2.74
396 397 3.495434 TCCCGGTTGTTTCAATGTAGT 57.505 42.857 0.00 0.00 0.00 2.73
397 398 3.142951 TCCCGGTTGTTTCAATGTAGTG 58.857 45.455 0.00 0.00 0.00 2.74
398 399 2.351350 CCCGGTTGTTTCAATGTAGTGC 60.351 50.000 0.00 0.00 0.00 4.40
399 400 2.552315 CCGGTTGTTTCAATGTAGTGCT 59.448 45.455 0.00 0.00 0.00 4.40
400 401 3.364964 CCGGTTGTTTCAATGTAGTGCTC 60.365 47.826 0.00 0.00 0.00 4.26
401 402 3.364964 CGGTTGTTTCAATGTAGTGCTCC 60.365 47.826 0.00 0.00 0.00 4.70
402 403 3.057526 GGTTGTTTCAATGTAGTGCTCCC 60.058 47.826 0.00 0.00 0.00 4.30
403 404 3.788227 TGTTTCAATGTAGTGCTCCCT 57.212 42.857 0.00 0.00 0.00 4.20
404 405 3.674997 TGTTTCAATGTAGTGCTCCCTC 58.325 45.455 0.00 0.00 0.00 4.30
405 406 3.010420 GTTTCAATGTAGTGCTCCCTCC 58.990 50.000 0.00 0.00 0.00 4.30
406 407 0.824109 TCAATGTAGTGCTCCCTCCG 59.176 55.000 0.00 0.00 0.00 4.63
407 408 0.537188 CAATGTAGTGCTCCCTCCGT 59.463 55.000 0.00 0.00 0.00 4.69
408 409 0.824759 AATGTAGTGCTCCCTCCGTC 59.175 55.000 0.00 0.00 0.00 4.79
409 410 1.043673 ATGTAGTGCTCCCTCCGTCC 61.044 60.000 0.00 0.00 0.00 4.79
410 411 1.380112 GTAGTGCTCCCTCCGTCCT 60.380 63.158 0.00 0.00 0.00 3.85
411 412 0.106819 GTAGTGCTCCCTCCGTCCTA 60.107 60.000 0.00 0.00 0.00 2.94
412 413 0.851469 TAGTGCTCCCTCCGTCCTAT 59.149 55.000 0.00 0.00 0.00 2.57
413 414 0.851469 AGTGCTCCCTCCGTCCTATA 59.149 55.000 0.00 0.00 0.00 1.31
414 415 1.217183 AGTGCTCCCTCCGTCCTATAA 59.783 52.381 0.00 0.00 0.00 0.98
415 416 2.158295 AGTGCTCCCTCCGTCCTATAAT 60.158 50.000 0.00 0.00 0.00 1.28
416 417 2.028930 GTGCTCCCTCCGTCCTATAATG 60.029 54.545 0.00 0.00 0.00 1.90
417 418 2.249139 GCTCCCTCCGTCCTATAATGT 58.751 52.381 0.00 0.00 0.00 2.71
418 419 3.181426 TGCTCCCTCCGTCCTATAATGTA 60.181 47.826 0.00 0.00 0.00 2.29
419 420 3.830755 GCTCCCTCCGTCCTATAATGTAA 59.169 47.826 0.00 0.00 0.00 2.41
420 421 4.466726 GCTCCCTCCGTCCTATAATGTAAT 59.533 45.833 0.00 0.00 0.00 1.89
421 422 5.655532 GCTCCCTCCGTCCTATAATGTAATA 59.344 44.000 0.00 0.00 0.00 0.98
422 423 6.405619 GCTCCCTCCGTCCTATAATGTAATAC 60.406 46.154 0.00 0.00 0.00 1.89
423 424 5.649395 TCCCTCCGTCCTATAATGTAATACG 59.351 44.000 0.00 0.00 0.00 3.06
424 425 5.416952 CCCTCCGTCCTATAATGTAATACGT 59.583 44.000 0.00 0.00 0.00 3.57
425 426 6.071728 CCCTCCGTCCTATAATGTAATACGTT 60.072 42.308 0.00 3.19 0.00 3.99
426 427 7.373493 CCTCCGTCCTATAATGTAATACGTTT 58.627 38.462 2.96 0.00 0.00 3.60
427 428 7.869429 CCTCCGTCCTATAATGTAATACGTTTT 59.131 37.037 2.96 0.00 0.00 2.43
428 429 9.252962 CTCCGTCCTATAATGTAATACGTTTTT 57.747 33.333 2.96 0.00 0.00 1.94
429 430 9.248291 TCCGTCCTATAATGTAATACGTTTTTC 57.752 33.333 2.96 0.00 0.00 2.29
430 431 8.209869 CCGTCCTATAATGTAATACGTTTTTCG 58.790 37.037 2.96 2.04 46.00 3.46
431 432 8.957028 CGTCCTATAATGTAATACGTTTTTCGA 58.043 33.333 2.96 0.00 42.86 3.71
433 434 9.800433 TCCTATAATGTAATACGTTTTTCGACA 57.200 29.630 2.96 0.00 42.86 4.35
434 435 9.839589 CCTATAATGTAATACGTTTTTCGACAC 57.160 33.333 2.96 0.00 42.86 3.67
438 439 7.872163 ATGTAATACGTTTTTCGACACTACA 57.128 32.000 0.00 0.00 42.86 2.74
439 440 7.872163 TGTAATACGTTTTTCGACACTACAT 57.128 32.000 0.00 0.00 42.86 2.29
440 441 8.296799 TGTAATACGTTTTTCGACACTACATT 57.703 30.769 0.00 0.00 42.86 2.71
441 442 9.404348 TGTAATACGTTTTTCGACACTACATTA 57.596 29.630 0.00 0.00 42.86 1.90
442 443 9.877096 GTAATACGTTTTTCGACACTACATTAG 57.123 33.333 0.00 0.00 42.86 1.73
443 444 8.524870 AATACGTTTTTCGACACTACATTAGT 57.475 30.769 0.00 0.00 42.86 2.24
474 475 9.840427 AAAAACATCTTACATTATGAAACGGAG 57.160 29.630 0.00 0.00 0.00 4.63
485 486 8.404000 ACATTATGAAACGGAGTAGTACTAGTG 58.596 37.037 15.07 4.42 45.00 2.74
499 500 0.669077 CTAGTGAGAACGGGCGCTAT 59.331 55.000 7.64 0.00 0.00 2.97
505 506 1.591863 GAACGGGCGCTATCCAGAC 60.592 63.158 7.64 0.00 0.00 3.51
560 561 3.165606 CTTCAGGAGCATGGACACC 57.834 57.895 0.00 0.00 0.00 4.16
567 568 2.436646 GCATGGACACCTCGTGGG 60.437 66.667 8.63 2.00 37.94 4.61
602 603 1.299976 GACCAGCTTCCGTGGGAAT 59.700 57.895 0.00 0.00 41.23 3.01
650 651 1.687612 CAGGGGAAGATGGTGCACT 59.312 57.895 17.98 0.00 0.00 4.40
707 708 5.627499 TGAACAGTAGTTGCATGGAATTC 57.373 39.130 1.94 2.44 38.30 2.17
715 716 6.989169 AGTAGTTGCATGGAATTCTCTATGAC 59.011 38.462 1.94 9.82 41.79 3.06
741 746 1.659098 CGGAGGCTTGATGTCGTTTAC 59.341 52.381 0.00 0.00 0.00 2.01
747 752 2.092211 GCTTGATGTCGTTTACACCTCG 59.908 50.000 0.00 0.00 42.09 4.63
783 788 2.080693 TGCTATTTGTCCGTCGCAAAT 58.919 42.857 13.14 13.14 45.22 2.32
784 789 2.486203 TGCTATTTGTCCGTCGCAAATT 59.514 40.909 13.62 2.64 41.96 1.82
785 790 3.057876 TGCTATTTGTCCGTCGCAAATTT 60.058 39.130 13.62 0.00 41.96 1.82
786 791 3.917985 GCTATTTGTCCGTCGCAAATTTT 59.082 39.130 13.62 0.00 41.96 1.82
787 792 4.384547 GCTATTTGTCCGTCGCAAATTTTT 59.615 37.500 13.62 0.00 41.96 1.94
874 879 2.987413 TCCACACGTGAATGAATTGC 57.013 45.000 25.01 0.00 0.00 3.56
956 961 0.034186 AAATGGATTCAGGAGGCGCA 60.034 50.000 10.83 0.00 0.00 6.09
1044 1050 0.991920 AGCGAAAGAATCAAGGGGGA 59.008 50.000 0.00 0.00 0.00 4.81
1216 1222 3.699484 CATCATCAGCGCCGCTCG 61.699 66.667 9.54 5.30 36.40 5.03
1230 1236 2.202623 CTCGTCGCTACCACCAGC 60.203 66.667 0.00 0.00 38.23 4.85
1266 1272 3.022401 TACGTACCCGCGTGACGTC 62.022 63.158 26.45 9.11 46.19 4.34
1285 1291 3.486584 GTCCGTGTAGTTAGACAAGACG 58.513 50.000 0.00 0.00 31.30 4.18
1375 1381 3.149648 GGCCGGCGGTACCTTCTA 61.150 66.667 28.82 0.00 35.61 2.10
1453 1462 3.562182 TCCTATCCACAATACGCTCAGA 58.438 45.455 0.00 0.00 0.00 3.27
1550 1559 3.376859 TCTGTTACTGCACAAGTTGTTGG 59.623 43.478 5.57 2.12 40.56 3.77
1798 1813 8.839310 TTTCAAAGTGTGAGGAAATTTCAAAA 57.161 26.923 19.49 1.50 37.61 2.44
1829 1844 8.831715 ATTGACGCATACATCTCAACATTATA 57.168 30.769 0.00 0.00 0.00 0.98
1830 1845 7.873739 TGACGCATACATCTCAACATTATAG 57.126 36.000 0.00 0.00 0.00 1.31
1831 1846 7.657336 TGACGCATACATCTCAACATTATAGA 58.343 34.615 0.00 0.00 0.00 1.98
1855 1870 3.485463 ACATGTCAAGGTTCGGAGAAA 57.515 42.857 0.00 0.00 45.90 2.52
1857 1872 4.398319 ACATGTCAAGGTTCGGAGAAAAT 58.602 39.130 0.00 0.00 45.90 1.82
1859 1874 3.064207 TGTCAAGGTTCGGAGAAAATCG 58.936 45.455 0.00 0.00 45.90 3.34
1862 1877 1.992170 AGGTTCGGAGAAAATCGACG 58.008 50.000 0.00 0.00 45.90 5.12
1867 1882 4.139531 GTTCGGAGAAAATCGACGTTTTC 58.860 43.478 19.19 19.19 45.90 2.29
1880 1895 0.929824 CGTTTTCTGTGCCTTGTGCG 60.930 55.000 0.00 0.00 45.60 5.34
1881 1896 0.380378 GTTTTCTGTGCCTTGTGCGA 59.620 50.000 0.00 0.00 45.60 5.10
1945 1960 6.443792 ACACCGGATTTTATCTTTTTCACAC 58.556 36.000 9.46 0.00 0.00 3.82
1948 1963 5.567534 CCGGATTTTATCTTTTTCACACGTG 59.432 40.000 15.48 15.48 0.00 4.49
1961 1976 4.048241 TCACACGTGACACATAAGTTGA 57.952 40.909 25.01 8.35 34.14 3.18
1989 2004 2.548057 TCCGTGAAATGACTTTGTGAGC 59.452 45.455 0.00 0.00 0.00 4.26
1995 2010 6.615088 GTGAAATGACTTTGTGAGCATGTAT 58.385 36.000 0.00 0.00 0.00 2.29
2018 2033 0.179121 ATCGAGATGTACGCGCCAAA 60.179 50.000 5.73 0.00 41.27 3.28
2027 2042 2.033550 TGTACGCGCCAAATTTTTGTCT 59.966 40.909 5.73 0.00 36.45 3.41
2029 2044 1.066303 ACGCGCCAAATTTTTGTCTGA 59.934 42.857 5.73 0.00 36.45 3.27
2031 2046 2.730928 CGCGCCAAATTTTTGTCTGAAT 59.269 40.909 0.00 0.00 36.45 2.57
2115 2130 4.025360 TGTGCCAAAATGCCATTCTCTAT 58.975 39.130 0.00 0.00 0.00 1.98
2116 2131 4.467082 TGTGCCAAAATGCCATTCTCTATT 59.533 37.500 0.00 0.00 0.00 1.73
2117 2132 5.046448 TGTGCCAAAATGCCATTCTCTATTT 60.046 36.000 0.00 0.00 0.00 1.40
2118 2133 5.876460 GTGCCAAAATGCCATTCTCTATTTT 59.124 36.000 0.00 0.00 34.17 1.82
2237 2255 2.954318 GTGATCTGCTTATGGGCATGTT 59.046 45.455 0.00 0.00 41.63 2.71
2273 2303 0.389948 ACTTAGCAGCGGCACACTAC 60.390 55.000 12.44 0.00 44.61 2.73
2337 2373 3.046968 TGCTACATGTTCGCCACTAAA 57.953 42.857 2.30 0.00 0.00 1.85
2520 2562 9.512588 AACACAATCTCAAGAGTTATTCAAGAT 57.487 29.630 0.00 0.00 0.00 2.40
2556 2598 8.878769 GCCCACAACCAAATTAATATACAAAAG 58.121 33.333 0.00 0.00 0.00 2.27
2625 2669 1.687146 TGGCAACCCAGGCAACAAA 60.687 52.632 0.00 0.00 41.47 2.83
2634 2678 2.555227 CCCAGGCAACAAAGATAGGTGT 60.555 50.000 0.00 0.00 41.41 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.920160 TCAAACACAATCTATTCATAGTGCA 57.080 32.000 0.00 0.00 0.00 4.57
1 2 9.229784 CATTCAAACACAATCTATTCATAGTGC 57.770 33.333 0.00 0.00 0.00 4.40
2 3 9.229784 GCATTCAAACACAATCTATTCATAGTG 57.770 33.333 0.00 0.00 0.00 2.74
3 4 8.959548 TGCATTCAAACACAATCTATTCATAGT 58.040 29.630 0.00 0.00 0.00 2.12
4 5 9.961265 ATGCATTCAAACACAATCTATTCATAG 57.039 29.630 0.00 0.00 0.00 2.23
5 6 9.738832 CATGCATTCAAACACAATCTATTCATA 57.261 29.630 0.00 0.00 0.00 2.15
6 7 7.709182 CCATGCATTCAAACACAATCTATTCAT 59.291 33.333 0.00 0.00 0.00 2.57
7 8 7.036829 CCATGCATTCAAACACAATCTATTCA 58.963 34.615 0.00 0.00 0.00 2.57
8 9 7.009815 CACCATGCATTCAAACACAATCTATTC 59.990 37.037 0.00 0.00 0.00 1.75
9 10 6.814644 CACCATGCATTCAAACACAATCTATT 59.185 34.615 0.00 0.00 0.00 1.73
10 11 6.334989 CACCATGCATTCAAACACAATCTAT 58.665 36.000 0.00 0.00 0.00 1.98
11 12 5.712004 CACCATGCATTCAAACACAATCTA 58.288 37.500 0.00 0.00 0.00 1.98
12 13 4.562082 CACCATGCATTCAAACACAATCT 58.438 39.130 0.00 0.00 0.00 2.40
13 14 3.123959 GCACCATGCATTCAAACACAATC 59.876 43.478 0.00 0.00 44.26 2.67
14 15 3.068560 GCACCATGCATTCAAACACAAT 58.931 40.909 0.00 0.00 44.26 2.71
15 16 2.481854 GCACCATGCATTCAAACACAA 58.518 42.857 0.00 0.00 44.26 3.33
16 17 2.151881 GCACCATGCATTCAAACACA 57.848 45.000 0.00 0.00 44.26 3.72
34 35 1.879380 TCACACTTTACTGCCATGTGC 59.121 47.619 0.00 0.00 40.37 4.57
35 36 2.485426 CCTCACACTTTACTGCCATGTG 59.515 50.000 0.00 0.00 41.62 3.21
36 37 2.371841 TCCTCACACTTTACTGCCATGT 59.628 45.455 0.00 0.00 0.00 3.21
37 38 3.005554 CTCCTCACACTTTACTGCCATG 58.994 50.000 0.00 0.00 0.00 3.66
38 39 2.616510 GCTCCTCACACTTTACTGCCAT 60.617 50.000 0.00 0.00 0.00 4.40
39 40 1.270839 GCTCCTCACACTTTACTGCCA 60.271 52.381 0.00 0.00 0.00 4.92
40 41 1.002544 AGCTCCTCACACTTTACTGCC 59.997 52.381 0.00 0.00 0.00 4.85
41 42 2.342179 GAGCTCCTCACACTTTACTGC 58.658 52.381 0.87 0.00 0.00 4.40
42 43 2.354203 GGGAGCTCCTCACACTTTACTG 60.354 54.545 31.36 0.00 33.47 2.74
43 44 1.903183 GGGAGCTCCTCACACTTTACT 59.097 52.381 31.36 0.00 33.47 2.24
44 45 1.066071 GGGGAGCTCCTCACACTTTAC 60.066 57.143 31.36 11.01 35.24 2.01
45 46 1.276622 GGGGAGCTCCTCACACTTTA 58.723 55.000 31.36 0.00 35.24 1.85
46 47 0.768221 TGGGGAGCTCCTCACACTTT 60.768 55.000 32.25 0.00 42.76 2.66
47 48 1.152030 TGGGGAGCTCCTCACACTT 60.152 57.895 32.25 0.00 42.76 3.16
48 49 2.533435 TGGGGAGCTCCTCACACT 59.467 61.111 32.25 0.00 42.76 3.55
52 53 2.057922 GGATATTTGGGGAGCTCCTCA 58.942 52.381 32.25 32.25 46.79 3.86
53 54 2.039613 CAGGATATTTGGGGAGCTCCTC 59.960 54.545 31.36 29.29 36.90 3.71
54 55 2.061061 CAGGATATTTGGGGAGCTCCT 58.939 52.381 31.36 14.55 35.95 3.69
55 56 1.546548 GCAGGATATTTGGGGAGCTCC 60.547 57.143 25.59 25.59 0.00 4.70
56 57 1.143684 TGCAGGATATTTGGGGAGCTC 59.856 52.381 4.71 4.71 0.00 4.09
57 58 1.225373 TGCAGGATATTTGGGGAGCT 58.775 50.000 0.00 0.00 0.00 4.09
58 59 2.298163 CAATGCAGGATATTTGGGGAGC 59.702 50.000 0.00 0.00 0.00 4.70
59 60 2.298163 GCAATGCAGGATATTTGGGGAG 59.702 50.000 0.00 0.00 0.00 4.30
60 61 2.318908 GCAATGCAGGATATTTGGGGA 58.681 47.619 0.00 0.00 0.00 4.81
61 62 1.000060 CGCAATGCAGGATATTTGGGG 60.000 52.381 5.91 0.00 0.00 4.96
62 63 1.682854 ACGCAATGCAGGATATTTGGG 59.317 47.619 5.91 10.05 0.00 4.12
63 64 2.734670 CACGCAATGCAGGATATTTGG 58.265 47.619 5.91 0.00 0.00 3.28
75 76 5.701029 TCATGATATATACGCACGCAATG 57.299 39.130 0.00 0.00 0.00 2.82
76 77 6.099341 TCTTCATGATATATACGCACGCAAT 58.901 36.000 0.00 0.00 0.00 3.56
77 78 5.465935 TCTTCATGATATATACGCACGCAA 58.534 37.500 0.00 0.00 0.00 4.85
78 79 5.054390 TCTTCATGATATATACGCACGCA 57.946 39.130 0.00 0.00 0.00 5.24
79 80 6.575083 ATTCTTCATGATATATACGCACGC 57.425 37.500 0.00 0.00 0.00 5.34
80 81 9.450807 TCATATTCTTCATGATATATACGCACG 57.549 33.333 0.00 0.00 0.00 5.34
90 91 8.090831 GCTACCAGTGTCATATTCTTCATGATA 58.909 37.037 0.00 0.00 35.02 2.15
91 92 6.933521 GCTACCAGTGTCATATTCTTCATGAT 59.066 38.462 0.00 0.00 35.02 2.45
92 93 6.098838 AGCTACCAGTGTCATATTCTTCATGA 59.901 38.462 0.00 0.00 0.00 3.07
93 94 6.286758 AGCTACCAGTGTCATATTCTTCATG 58.713 40.000 0.00 0.00 0.00 3.07
94 95 6.326064 AGAGCTACCAGTGTCATATTCTTCAT 59.674 38.462 0.00 0.00 0.00 2.57
95 96 5.658634 AGAGCTACCAGTGTCATATTCTTCA 59.341 40.000 0.00 0.00 0.00 3.02
96 97 6.155475 AGAGCTACCAGTGTCATATTCTTC 57.845 41.667 0.00 0.00 0.00 2.87
97 98 6.552445 AAGAGCTACCAGTGTCATATTCTT 57.448 37.500 0.00 0.00 0.00 2.52
98 99 6.836527 ACTAAGAGCTACCAGTGTCATATTCT 59.163 38.462 0.00 0.00 0.00 2.40
99 100 6.920758 CACTAAGAGCTACCAGTGTCATATTC 59.079 42.308 11.20 0.00 34.91 1.75
100 101 6.607600 TCACTAAGAGCTACCAGTGTCATATT 59.392 38.462 16.42 0.00 39.50 1.28
101 102 6.129874 TCACTAAGAGCTACCAGTGTCATAT 58.870 40.000 16.42 0.00 39.50 1.78
102 103 5.506708 TCACTAAGAGCTACCAGTGTCATA 58.493 41.667 16.42 0.62 39.50 2.15
140 141 4.142730 GCAACATGAGACTGAAGATCAACC 60.143 45.833 0.00 0.00 0.00 3.77
199 200 4.684485 GCAAGGCTGGACATATTCTACACT 60.684 45.833 0.00 0.00 0.00 3.55
209 210 4.564406 GCTACTATATGCAAGGCTGGACAT 60.564 45.833 0.00 0.00 0.00 3.06
216 217 2.743636 TCCGCTACTATATGCAAGGC 57.256 50.000 0.00 0.00 0.00 4.35
232 233 3.653344 TGACTGAGTTCAACTTGATCCG 58.347 45.455 0.00 0.00 0.00 4.18
264 265 4.365514 TGCTTGGTCCAAGAAGTAATCA 57.634 40.909 31.94 16.75 43.42 2.57
292 293 0.970640 ATGAAGCAGCAACATGCCAA 59.029 45.000 0.00 0.00 46.52 4.52
378 379 2.552315 AGCACTACATTGAAACAACCGG 59.448 45.455 0.00 0.00 0.00 5.28
381 382 3.821033 AGGGAGCACTACATTGAAACAAC 59.179 43.478 0.00 0.00 0.00 3.32
388 389 0.537188 ACGGAGGGAGCACTACATTG 59.463 55.000 0.00 0.00 0.00 2.82
394 395 0.851469 TATAGGACGGAGGGAGCACT 59.149 55.000 0.00 0.00 0.00 4.40
395 396 1.700955 TTATAGGACGGAGGGAGCAC 58.299 55.000 0.00 0.00 0.00 4.40
396 397 2.248248 CATTATAGGACGGAGGGAGCA 58.752 52.381 0.00 0.00 0.00 4.26
397 398 2.249139 ACATTATAGGACGGAGGGAGC 58.751 52.381 0.00 0.00 0.00 4.70
398 399 6.183360 CGTATTACATTATAGGACGGAGGGAG 60.183 46.154 0.00 0.00 0.00 4.30
399 400 5.649395 CGTATTACATTATAGGACGGAGGGA 59.351 44.000 0.00 0.00 0.00 4.20
400 401 5.416952 ACGTATTACATTATAGGACGGAGGG 59.583 44.000 0.00 0.00 33.32 4.30
401 402 6.506500 ACGTATTACATTATAGGACGGAGG 57.493 41.667 0.00 0.00 33.32 4.30
402 403 8.807667 AAAACGTATTACATTATAGGACGGAG 57.192 34.615 0.00 0.00 33.32 4.63
403 404 9.248291 GAAAAACGTATTACATTATAGGACGGA 57.752 33.333 0.00 0.00 33.32 4.69
404 405 8.209869 CGAAAAACGTATTACATTATAGGACGG 58.790 37.037 0.00 0.00 37.22 4.79
405 406 8.957028 TCGAAAAACGTATTACATTATAGGACG 58.043 33.333 0.00 0.00 43.13 4.79
407 408 9.800433 TGTCGAAAAACGTATTACATTATAGGA 57.200 29.630 0.00 0.00 43.13 2.94
408 409 9.839589 GTGTCGAAAAACGTATTACATTATAGG 57.160 33.333 0.00 0.00 43.13 2.57
412 413 9.404348 TGTAGTGTCGAAAAACGTATTACATTA 57.596 29.630 0.00 0.00 43.13 1.90
413 414 8.296799 TGTAGTGTCGAAAAACGTATTACATT 57.703 30.769 0.00 0.00 43.13 2.71
414 415 7.872163 TGTAGTGTCGAAAAACGTATTACAT 57.128 32.000 0.00 0.00 43.13 2.29
415 416 7.872163 ATGTAGTGTCGAAAAACGTATTACA 57.128 32.000 0.00 0.00 43.13 2.41
416 417 9.877096 CTAATGTAGTGTCGAAAAACGTATTAC 57.123 33.333 0.00 0.00 43.13 1.89
417 418 9.624697 ACTAATGTAGTGTCGAAAAACGTATTA 57.375 29.630 0.00 0.00 39.30 0.98
418 419 8.524870 ACTAATGTAGTGTCGAAAAACGTATT 57.475 30.769 0.00 0.00 39.30 1.89
448 449 9.840427 CTCCGTTTCATAATGTAAGATGTTTTT 57.160 29.630 0.00 0.00 0.00 1.94
449 450 9.010029 ACTCCGTTTCATAATGTAAGATGTTTT 57.990 29.630 0.00 0.00 0.00 2.43
450 451 8.561738 ACTCCGTTTCATAATGTAAGATGTTT 57.438 30.769 0.00 0.00 0.00 2.83
451 452 9.314321 CTACTCCGTTTCATAATGTAAGATGTT 57.686 33.333 0.00 0.00 0.00 2.71
452 453 8.475639 ACTACTCCGTTTCATAATGTAAGATGT 58.524 33.333 0.00 0.00 0.00 3.06
453 454 8.873215 ACTACTCCGTTTCATAATGTAAGATG 57.127 34.615 0.00 0.00 0.00 2.90
454 455 9.962783 GTACTACTCCGTTTCATAATGTAAGAT 57.037 33.333 0.00 0.00 0.00 2.40
455 456 9.182214 AGTACTACTCCGTTTCATAATGTAAGA 57.818 33.333 0.00 0.00 0.00 2.10
458 459 9.618890 ACTAGTACTACTCCGTTTCATAATGTA 57.381 33.333 0.00 0.00 0.00 2.29
459 460 8.404000 CACTAGTACTACTCCGTTTCATAATGT 58.596 37.037 0.00 0.00 0.00 2.71
460 461 8.618677 TCACTAGTACTACTCCGTTTCATAATG 58.381 37.037 0.00 0.00 0.00 1.90
461 462 8.743085 TCACTAGTACTACTCCGTTTCATAAT 57.257 34.615 0.00 0.00 0.00 1.28
462 463 8.043113 TCTCACTAGTACTACTCCGTTTCATAA 58.957 37.037 0.00 0.00 0.00 1.90
463 464 7.559486 TCTCACTAGTACTACTCCGTTTCATA 58.441 38.462 0.00 0.00 0.00 2.15
464 465 6.413052 TCTCACTAGTACTACTCCGTTTCAT 58.587 40.000 0.00 0.00 0.00 2.57
465 466 5.798132 TCTCACTAGTACTACTCCGTTTCA 58.202 41.667 0.00 0.00 0.00 2.69
466 467 6.541969 GTTCTCACTAGTACTACTCCGTTTC 58.458 44.000 0.00 0.00 0.00 2.78
467 468 5.121454 CGTTCTCACTAGTACTACTCCGTTT 59.879 44.000 0.00 0.00 0.00 3.60
468 469 4.629200 CGTTCTCACTAGTACTACTCCGTT 59.371 45.833 0.00 0.00 0.00 4.44
469 470 4.180057 CGTTCTCACTAGTACTACTCCGT 58.820 47.826 0.00 0.00 0.00 4.69
470 471 3.555139 CCGTTCTCACTAGTACTACTCCG 59.445 52.174 0.00 0.00 0.00 4.63
471 472 3.876320 CCCGTTCTCACTAGTACTACTCC 59.124 52.174 0.00 0.00 0.00 3.85
472 473 3.312146 GCCCGTTCTCACTAGTACTACTC 59.688 52.174 0.00 0.00 0.00 2.59
473 474 3.277715 GCCCGTTCTCACTAGTACTACT 58.722 50.000 0.00 0.00 0.00 2.57
474 475 2.031437 CGCCCGTTCTCACTAGTACTAC 59.969 54.545 0.00 0.00 0.00 2.73
475 476 2.283298 CGCCCGTTCTCACTAGTACTA 58.717 52.381 1.89 1.89 0.00 1.82
485 486 1.300233 CTGGATAGCGCCCGTTCTC 60.300 63.158 2.29 0.00 0.00 2.87
505 506 3.303881 TGTTGGTCAGTTCAGAGATCG 57.696 47.619 0.00 0.00 0.00 3.69
545 546 1.153489 CGAGGTGTCCATGCTCCTG 60.153 63.158 0.00 0.00 33.06 3.86
556 557 4.954118 TGCTCCCCCACGAGGTGT 62.954 66.667 0.00 0.00 0.00 4.16
560 561 3.465403 CCTCTGCTCCCCCACGAG 61.465 72.222 0.00 0.00 0.00 4.18
602 603 2.856720 GCAAACGAACGAGGCAAATCAA 60.857 45.455 0.14 0.00 0.00 2.57
707 708 1.467678 CCTCCGCCCCTGTCATAGAG 61.468 65.000 0.00 0.00 0.00 2.43
715 716 3.801997 ATCAAGCCTCCGCCCCTG 61.802 66.667 0.00 0.00 34.57 4.45
735 740 4.850859 TTATTGCATCGAGGTGTAAACG 57.149 40.909 0.00 0.00 0.00 3.60
741 746 5.333645 GCAGACTATTTATTGCATCGAGGTG 60.334 44.000 0.00 0.00 36.59 4.00
786 791 9.317827 ACCCAGAAATAGTAGACTACTGTAAAA 57.682 33.333 22.90 5.07 39.81 1.52
787 792 8.890410 ACCCAGAAATAGTAGACTACTGTAAA 57.110 34.615 22.90 5.43 39.81 2.01
874 879 1.937223 TGTGTTTAGACGTGCAACTGG 59.063 47.619 0.00 0.00 31.75 4.00
937 942 0.034186 TGCGCCTCCTGAATCCATTT 60.034 50.000 4.18 0.00 0.00 2.32
940 945 2.268920 GTGCGCCTCCTGAATCCA 59.731 61.111 4.18 0.00 0.00 3.41
956 961 4.529897 TCCCTCCACATATATATACGCGT 58.470 43.478 19.17 19.17 0.00 6.01
1216 1222 2.434359 GGTGCTGGTGGTAGCGAC 60.434 66.667 0.00 0.00 46.61 5.19
1230 1236 2.352814 CGTACCTGGAACTGAAGAGGTG 60.353 54.545 0.00 0.00 39.25 4.00
1262 1268 3.058639 GTCTTGTCTAACTACACGGACGT 60.059 47.826 0.00 0.00 0.00 4.34
1266 1272 2.248487 GCGTCTTGTCTAACTACACGG 58.752 52.381 0.00 0.00 0.00 4.94
1270 1276 2.095567 TCCACGCGTCTTGTCTAACTAC 60.096 50.000 9.86 0.00 0.00 2.73
1285 1291 2.544685 CTAGCTGCCATATATCCACGC 58.455 52.381 0.00 0.00 0.00 5.34
1372 1378 1.410932 GCTGCTTCTCCCTCCTCTAGA 60.411 57.143 0.00 0.00 0.00 2.43
1375 1381 0.977108 CTGCTGCTTCTCCCTCCTCT 60.977 60.000 0.00 0.00 0.00 3.69
1423 1432 5.048013 CGTATTGTGGATAGGAGTAGCATCA 60.048 44.000 0.00 0.00 0.00 3.07
1453 1462 1.586422 CGCCCATCATTTCGTGATCT 58.414 50.000 0.00 0.00 45.76 2.75
1570 1585 2.131183 CCGCAGAGAAGCAGCTATAAC 58.869 52.381 0.00 0.00 0.00 1.89
1730 1745 8.625651 CACCAACGGATTTCCATACAAAATATA 58.374 33.333 0.00 0.00 35.14 0.86
1741 1756 0.608035 GGAGCACCAACGGATTTCCA 60.608 55.000 0.00 0.00 33.97 3.53
1804 1819 7.734924 ATAATGTTGAGATGTATGCGTCAAT 57.265 32.000 5.77 0.00 31.84 2.57
1808 1823 8.471361 CATCTATAATGTTGAGATGTATGCGT 57.529 34.615 3.46 0.00 41.04 5.24
1821 1836 9.905713 AACCTTGACATGTACATCTATAATGTT 57.094 29.630 5.07 6.07 31.82 2.71
1829 1844 3.513912 TCCGAACCTTGACATGTACATCT 59.486 43.478 5.07 0.00 0.00 2.90
1830 1845 3.857052 TCCGAACCTTGACATGTACATC 58.143 45.455 5.07 0.00 0.00 3.06
1831 1846 3.513912 TCTCCGAACCTTGACATGTACAT 59.486 43.478 1.41 1.41 0.00 2.29
1841 1856 2.092211 CGTCGATTTTCTCCGAACCTTG 59.908 50.000 0.00 0.00 36.50 3.61
1855 1870 1.878953 AGGCACAGAAAACGTCGATT 58.121 45.000 0.00 0.00 0.00 3.34
1857 1872 0.934496 CAAGGCACAGAAAACGTCGA 59.066 50.000 0.00 0.00 0.00 4.20
1859 1874 1.859998 GCACAAGGCACAGAAAACGTC 60.860 52.381 0.00 0.00 43.97 4.34
1862 1877 0.380378 TCGCACAAGGCACAGAAAAC 59.620 50.000 0.00 0.00 45.17 2.43
1867 1882 3.639162 TTTTTCGCACAAGGCACAG 57.361 47.368 0.00 0.00 45.17 3.66
1945 1960 2.400399 ACCGTCAACTTATGTGTCACG 58.600 47.619 0.00 0.00 0.00 4.35
1948 1963 4.609783 CGGAAAACCGTCAACTTATGTGTC 60.610 45.833 0.00 0.00 0.00 3.67
1972 1987 6.822667 ATACATGCTCACAAAGTCATTTCA 57.177 33.333 0.00 0.00 0.00 2.69
1989 2004 6.129691 GCGCGTACATCTCGATATTATACATG 60.130 42.308 8.43 0.00 0.00 3.21
1995 2010 2.485038 TGGCGCGTACATCTCGATATTA 59.515 45.455 8.43 0.00 0.00 0.98
2099 2114 9.205513 AGGATACAAAATAGAGAATGGCATTTT 57.794 29.630 14.93 8.80 41.41 1.82
2133 2148 2.422127 GGGCATGTGTGTGTGTATAACC 59.578 50.000 0.00 0.00 0.00 2.85
2143 2158 0.840288 TAGAGGTGGGGCATGTGTGT 60.840 55.000 0.00 0.00 0.00 3.72
2144 2159 0.392998 GTAGAGGTGGGGCATGTGTG 60.393 60.000 0.00 0.00 0.00 3.82
2237 2255 7.436080 GCTGCTAAGTGTTAACGTAATGGTATA 59.564 37.037 0.26 0.00 0.00 1.47
2520 2562 1.638070 TGGTTGTGGGCATCCTTGATA 59.362 47.619 0.00 0.00 35.89 2.15
2556 2598 3.628017 CAGTGGTTTCGTTGGTCATTTC 58.372 45.455 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.