Multiple sequence alignment - TraesCS5B01G155900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G155900 chr5B 100.000 4998 0 0 1 4998 287801362 287796365 0.000000e+00 9230
1 TraesCS5B01G155900 chr5B 92.754 276 16 4 4 276 528552540 528552814 3.630000e-106 396
2 TraesCS5B01G155900 chr5D 96.013 4439 128 21 584 4998 254826523 254830936 0.000000e+00 7171
3 TraesCS5B01G155900 chr5D 91.667 276 18 5 4 276 552070819 552070546 1.310000e-100 377
4 TraesCS5B01G155900 chr5D 96.000 75 3 0 277 351 254826162 254826236 6.790000e-24 122
5 TraesCS5B01G155900 chr5A 93.111 3266 140 33 783 4013 338226276 338229491 0.000000e+00 4706
6 TraesCS5B01G155900 chr5A 95.770 993 27 5 4016 4998 338229522 338230509 0.000000e+00 1587
7 TraesCS5B01G155900 chr5A 90.909 275 23 2 4 277 688268256 688268529 7.900000e-98 368
8 TraesCS5B01G155900 chr5A 92.683 205 6 5 573 773 338222106 338222305 2.280000e-73 287
9 TraesCS5B01G155900 chr5A 85.068 221 19 2 349 568 338221819 338222026 3.920000e-51 213
10 TraesCS5B01G155900 chr2D 92.354 497 29 2 1054 1542 628363513 628364008 0.000000e+00 699
11 TraesCS5B01G155900 chr6B 90.650 492 41 3 1047 1538 505328754 505328268 0.000000e+00 649
12 TraesCS5B01G155900 chr7B 90.951 431 26 6 1112 1542 439316839 439316422 7.260000e-158 568
13 TraesCS5B01G155900 chr4B 88.710 434 32 7 1109 1542 68649645 68650061 9.590000e-142 514
14 TraesCS5B01G155900 chr1A 93.091 275 16 3 8 280 487684807 487684534 2.800000e-107 399
15 TraesCS5B01G155900 chr1B 92.754 276 15 5 4 276 138577875 138578148 1.300000e-105 394
16 TraesCS5B01G155900 chr1B 91.336 277 19 5 4 276 283913039 283913314 1.700000e-99 374
17 TraesCS5B01G155900 chr2B 92.029 276 20 2 4 277 73791399 73791124 2.180000e-103 387
18 TraesCS5B01G155900 chr2B 91.398 279 20 4 4 279 8420876 8420599 3.650000e-101 379
19 TraesCS5B01G155900 chr2B 91.273 275 22 2 4 276 387082484 387082210 1.700000e-99 374
20 TraesCS5B01G155900 chr2B 90.071 282 21 5 1052 1333 653684688 653684962 4.760000e-95 359
21 TraesCS5B01G155900 chr2B 91.189 227 13 5 1319 1538 653685953 653686179 8.130000e-78 302


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G155900 chr5B 287796365 287801362 4997 True 9230.00 9230 100.0000 1 4998 1 chr5B.!!$R1 4997
1 TraesCS5B01G155900 chr5D 254826162 254830936 4774 False 3646.50 7171 96.0065 277 4998 2 chr5D.!!$F1 4721
2 TraesCS5B01G155900 chr5A 338221819 338230509 8690 False 1698.25 4706 91.6580 349 4998 4 chr5A.!!$F2 4649
3 TraesCS5B01G155900 chr2B 653684688 653686179 1491 False 330.50 359 90.6300 1052 1538 2 chr2B.!!$F1 486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
43 44 0.175760 TCGCTCTTCACTATGTGCCC 59.824 55.0 0.00 0.00 32.98 5.36 F
44 45 0.176680 CGCTCTTCACTATGTGCCCT 59.823 55.0 0.00 0.00 32.98 5.19 F
96 97 0.241213 GCACAGACTCGAGTGTAGCA 59.759 55.0 25.58 0.00 38.02 3.49 F
909 4981 0.251634 TACAATGGCGACCTCATGCA 59.748 50.0 0.00 0.00 0.00 3.96 F
2075 7175 0.318275 GCAGCGCTAGTGCTACCTAG 60.318 60.0 29.33 17.84 45.23 3.02 F
3343 8455 0.179097 GGCTCGTGGAGACCTTCATC 60.179 60.0 0.00 0.00 30.04 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1970 7063 2.095969 TGACGCAAGCAGGAATTTAACG 60.096 45.455 0.00 0.0 45.62 3.18 R
1972 7065 3.146066 ACTGACGCAAGCAGGAATTTAA 58.854 40.909 0.00 0.0 42.94 1.52 R
2105 7205 7.485277 CGAAGACCAAAGTCATACTACTACTTG 59.515 40.741 0.00 0.0 46.15 3.16 R
2374 7474 0.745486 TGGTGAGCGCAATCTCCATG 60.745 55.000 11.47 0.0 37.80 3.66 R
3867 8994 0.829990 CTGCTCTTCTTCCTCCTCCC 59.170 60.000 0.00 0.0 0.00 4.30 R
4921 10087 1.401905 GGGAGCTTAAAATGAGTGCGG 59.598 52.381 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.701765 GATCTGTTGTGCAGGATCATACT 58.298 43.478 0.00 0.00 45.08 2.12
23 24 4.128925 TCTGTTGTGCAGGATCATACTC 57.871 45.455 0.00 0.00 45.08 2.59
24 25 3.771479 TCTGTTGTGCAGGATCATACTCT 59.229 43.478 0.00 0.00 45.08 3.24
25 26 4.118410 CTGTTGTGCAGGATCATACTCTC 58.882 47.826 0.00 0.00 41.42 3.20
26 27 3.119291 GTTGTGCAGGATCATACTCTCG 58.881 50.000 0.00 0.00 0.00 4.04
27 28 1.067669 TGTGCAGGATCATACTCTCGC 59.932 52.381 0.00 0.00 0.00 5.03
28 29 1.339610 GTGCAGGATCATACTCTCGCT 59.660 52.381 0.00 0.00 0.00 4.93
29 30 1.611006 TGCAGGATCATACTCTCGCTC 59.389 52.381 0.00 0.00 0.00 5.03
30 31 1.885887 GCAGGATCATACTCTCGCTCT 59.114 52.381 0.00 0.00 0.00 4.09
31 32 2.295909 GCAGGATCATACTCTCGCTCTT 59.704 50.000 0.00 0.00 0.00 2.85
32 33 3.611530 GCAGGATCATACTCTCGCTCTTC 60.612 52.174 0.00 0.00 0.00 2.87
33 34 3.567585 CAGGATCATACTCTCGCTCTTCA 59.432 47.826 0.00 0.00 0.00 3.02
34 35 3.568007 AGGATCATACTCTCGCTCTTCAC 59.432 47.826 0.00 0.00 0.00 3.18
35 36 3.568007 GGATCATACTCTCGCTCTTCACT 59.432 47.826 0.00 0.00 0.00 3.41
36 37 4.757657 GGATCATACTCTCGCTCTTCACTA 59.242 45.833 0.00 0.00 0.00 2.74
37 38 5.414454 GGATCATACTCTCGCTCTTCACTAT 59.586 44.000 0.00 0.00 0.00 2.12
38 39 5.681337 TCATACTCTCGCTCTTCACTATG 57.319 43.478 0.00 0.00 0.00 2.23
39 40 5.126779 TCATACTCTCGCTCTTCACTATGT 58.873 41.667 0.00 0.00 0.00 2.29
40 41 3.773860 ACTCTCGCTCTTCACTATGTG 57.226 47.619 0.00 0.00 34.45 3.21
41 42 2.159310 ACTCTCGCTCTTCACTATGTGC 60.159 50.000 0.00 0.00 32.98 4.57
42 43 1.135139 TCTCGCTCTTCACTATGTGCC 59.865 52.381 0.00 0.00 32.98 5.01
43 44 0.175760 TCGCTCTTCACTATGTGCCC 59.824 55.000 0.00 0.00 32.98 5.36
44 45 0.176680 CGCTCTTCACTATGTGCCCT 59.823 55.000 0.00 0.00 32.98 5.19
45 46 1.804372 CGCTCTTCACTATGTGCCCTC 60.804 57.143 0.00 0.00 32.98 4.30
46 47 1.484240 GCTCTTCACTATGTGCCCTCT 59.516 52.381 0.00 0.00 32.98 3.69
47 48 2.741228 GCTCTTCACTATGTGCCCTCTG 60.741 54.545 0.00 0.00 32.98 3.35
48 49 2.762887 CTCTTCACTATGTGCCCTCTGA 59.237 50.000 0.00 0.00 32.98 3.27
49 50 2.762887 TCTTCACTATGTGCCCTCTGAG 59.237 50.000 0.00 0.00 32.98 3.35
50 51 2.238084 TCACTATGTGCCCTCTGAGT 57.762 50.000 3.66 0.00 32.98 3.41
51 52 2.540383 TCACTATGTGCCCTCTGAGTT 58.460 47.619 3.66 0.00 32.98 3.01
52 53 3.708451 TCACTATGTGCCCTCTGAGTTA 58.292 45.455 3.66 0.00 32.98 2.24
53 54 3.447586 TCACTATGTGCCCTCTGAGTTAC 59.552 47.826 3.66 0.65 32.98 2.50
54 55 3.195610 CACTATGTGCCCTCTGAGTTACA 59.804 47.826 3.66 6.19 0.00 2.41
55 56 3.449018 ACTATGTGCCCTCTGAGTTACAG 59.551 47.826 3.66 0.00 46.97 2.74
56 57 1.717032 TGTGCCCTCTGAGTTACAGT 58.283 50.000 3.66 0.00 45.86 3.55
57 58 2.047061 TGTGCCCTCTGAGTTACAGTT 58.953 47.619 3.66 0.00 45.86 3.16
58 59 3.236047 TGTGCCCTCTGAGTTACAGTTA 58.764 45.455 3.66 0.00 45.86 2.24
59 60 3.258372 TGTGCCCTCTGAGTTACAGTTAG 59.742 47.826 3.66 0.00 45.86 2.34
60 61 2.233922 TGCCCTCTGAGTTACAGTTAGC 59.766 50.000 3.66 0.00 45.86 3.09
61 62 2.498078 GCCCTCTGAGTTACAGTTAGCT 59.502 50.000 3.66 0.00 45.86 3.32
62 63 3.677424 GCCCTCTGAGTTACAGTTAGCTG 60.677 52.174 4.86 4.86 45.86 4.24
63 64 3.764434 CCCTCTGAGTTACAGTTAGCTGA 59.236 47.826 14.09 0.00 45.28 4.26
64 65 4.381079 CCCTCTGAGTTACAGTTAGCTGAC 60.381 50.000 14.09 0.00 45.28 3.51
65 66 4.461081 CCTCTGAGTTACAGTTAGCTGACT 59.539 45.833 14.09 5.11 45.28 3.41
66 67 5.047660 CCTCTGAGTTACAGTTAGCTGACTT 60.048 44.000 14.09 3.76 45.28 3.01
67 68 6.015027 TCTGAGTTACAGTTAGCTGACTTC 57.985 41.667 14.09 4.44 45.28 3.01
68 69 5.770663 TCTGAGTTACAGTTAGCTGACTTCT 59.229 40.000 14.09 5.41 45.28 2.85
69 70 6.265649 TCTGAGTTACAGTTAGCTGACTTCTT 59.734 38.462 14.09 0.00 45.28 2.52
70 71 6.448006 TGAGTTACAGTTAGCTGACTTCTTC 58.552 40.000 14.09 3.87 45.28 2.87
71 72 6.040504 TGAGTTACAGTTAGCTGACTTCTTCA 59.959 38.462 14.09 6.26 45.28 3.02
72 73 6.217294 AGTTACAGTTAGCTGACTTCTTCAC 58.783 40.000 14.09 2.25 45.28 3.18
73 74 3.643763 ACAGTTAGCTGACTTCTTCACG 58.356 45.455 14.09 0.00 45.28 4.35
74 75 3.318275 ACAGTTAGCTGACTTCTTCACGA 59.682 43.478 14.09 0.00 45.28 4.35
75 76 4.202121 ACAGTTAGCTGACTTCTTCACGAA 60.202 41.667 14.09 0.00 45.28 3.85
76 77 4.384247 CAGTTAGCTGACTTCTTCACGAAG 59.616 45.833 8.70 0.08 45.28 3.79
77 78 6.577725 CAGTTAGCTGACTTCTTCACGAAGG 61.578 48.000 8.70 0.00 45.28 3.46
83 84 2.154854 CTTCTTCACGAAGGCACAGA 57.845 50.000 6.94 0.00 44.37 3.41
84 85 1.795286 CTTCTTCACGAAGGCACAGAC 59.205 52.381 6.94 0.00 44.37 3.51
85 86 1.040646 TCTTCACGAAGGCACAGACT 58.959 50.000 6.94 0.00 38.88 3.24
86 87 1.000163 TCTTCACGAAGGCACAGACTC 60.000 52.381 6.94 0.00 38.88 3.36
87 88 0.318699 TTCACGAAGGCACAGACTCG 60.319 55.000 0.00 0.00 0.00 4.18
88 89 1.170290 TCACGAAGGCACAGACTCGA 61.170 55.000 0.00 0.00 0.00 4.04
89 90 0.730834 CACGAAGGCACAGACTCGAG 60.731 60.000 11.84 11.84 0.00 4.04
90 91 1.173444 ACGAAGGCACAGACTCGAGT 61.173 55.000 20.18 20.18 0.00 4.18
91 92 0.730834 CGAAGGCACAGACTCGAGTG 60.731 60.000 25.58 12.45 38.74 3.51
92 93 0.315568 GAAGGCACAGACTCGAGTGT 59.684 55.000 25.58 17.65 38.02 3.55
93 94 1.540267 GAAGGCACAGACTCGAGTGTA 59.460 52.381 25.58 0.00 38.02 2.90
94 95 1.169577 AGGCACAGACTCGAGTGTAG 58.830 55.000 25.58 15.76 38.02 2.74
95 96 0.456995 GGCACAGACTCGAGTGTAGC 60.457 60.000 25.58 23.97 38.02 3.58
96 97 0.241213 GCACAGACTCGAGTGTAGCA 59.759 55.000 25.58 0.00 38.02 3.49
97 98 1.135257 GCACAGACTCGAGTGTAGCAT 60.135 52.381 25.58 2.34 38.02 3.79
98 99 2.524034 CACAGACTCGAGTGTAGCATG 58.476 52.381 25.58 11.45 0.00 4.06
99 100 1.474478 ACAGACTCGAGTGTAGCATGG 59.526 52.381 25.58 8.40 0.00 3.66
100 101 1.107114 AGACTCGAGTGTAGCATGGG 58.893 55.000 25.58 0.00 0.00 4.00
101 102 0.818296 GACTCGAGTGTAGCATGGGT 59.182 55.000 25.58 0.00 0.00 4.51
102 103 1.204941 GACTCGAGTGTAGCATGGGTT 59.795 52.381 25.58 0.00 0.00 4.11
103 104 1.623811 ACTCGAGTGTAGCATGGGTTT 59.376 47.619 19.30 0.00 0.00 3.27
104 105 2.038557 ACTCGAGTGTAGCATGGGTTTT 59.961 45.455 19.30 0.00 0.00 2.43
105 106 2.673368 CTCGAGTGTAGCATGGGTTTTC 59.327 50.000 3.62 0.00 0.00 2.29
106 107 1.737793 CGAGTGTAGCATGGGTTTTCC 59.262 52.381 0.00 0.00 39.75 3.13
107 108 2.615493 CGAGTGTAGCATGGGTTTTCCT 60.615 50.000 0.00 0.00 40.46 3.36
108 109 3.010420 GAGTGTAGCATGGGTTTTCCTC 58.990 50.000 0.00 0.00 40.46 3.71
109 110 2.644798 AGTGTAGCATGGGTTTTCCTCT 59.355 45.455 0.00 0.00 40.46 3.69
110 111 3.010420 GTGTAGCATGGGTTTTCCTCTC 58.990 50.000 0.00 0.00 40.46 3.20
111 112 2.026262 TGTAGCATGGGTTTTCCTCTCC 60.026 50.000 0.00 0.00 40.46 3.71
112 113 1.075601 AGCATGGGTTTTCCTCTCCA 58.924 50.000 0.00 0.00 40.46 3.86
113 114 1.428912 AGCATGGGTTTTCCTCTCCAA 59.571 47.619 0.00 0.00 40.46 3.53
114 115 2.158325 AGCATGGGTTTTCCTCTCCAAA 60.158 45.455 0.00 0.00 40.46 3.28
115 116 2.029020 GCATGGGTTTTCCTCTCCAAAC 60.029 50.000 0.00 0.00 40.46 2.93
116 117 3.500343 CATGGGTTTTCCTCTCCAAACT 58.500 45.455 0.00 0.00 40.46 2.66
117 118 3.223674 TGGGTTTTCCTCTCCAAACTC 57.776 47.619 0.00 0.00 40.46 3.01
118 119 2.512056 TGGGTTTTCCTCTCCAAACTCA 59.488 45.455 0.00 0.00 40.36 3.41
119 120 3.149981 GGGTTTTCCTCTCCAAACTCAG 58.850 50.000 0.00 0.00 40.46 3.35
120 121 3.435169 GGGTTTTCCTCTCCAAACTCAGT 60.435 47.826 0.00 0.00 40.46 3.41
121 122 3.565902 GGTTTTCCTCTCCAAACTCAGTG 59.434 47.826 0.00 0.00 34.00 3.66
122 123 4.200092 GTTTTCCTCTCCAAACTCAGTGT 58.800 43.478 0.00 0.00 31.33 3.55
123 124 4.503714 TTTCCTCTCCAAACTCAGTGTT 57.496 40.909 0.00 0.00 41.29 3.32
124 125 3.475566 TCCTCTCCAAACTCAGTGTTG 57.524 47.619 0.00 0.00 39.13 3.33
125 126 2.771943 TCCTCTCCAAACTCAGTGTTGT 59.228 45.455 0.00 0.00 39.13 3.32
126 127 3.199946 TCCTCTCCAAACTCAGTGTTGTT 59.800 43.478 0.00 0.00 39.13 2.83
127 128 3.313526 CCTCTCCAAACTCAGTGTTGTTG 59.686 47.826 5.37 1.64 39.13 3.33
128 129 4.191544 CTCTCCAAACTCAGTGTTGTTGA 58.808 43.478 5.37 0.71 39.13 3.18
129 130 4.780815 TCTCCAAACTCAGTGTTGTTGAT 58.219 39.130 5.37 0.00 39.13 2.57
130 131 4.816385 TCTCCAAACTCAGTGTTGTTGATC 59.184 41.667 5.37 0.00 39.13 2.92
131 132 3.882888 TCCAAACTCAGTGTTGTTGATCC 59.117 43.478 5.37 0.00 39.13 3.36
132 133 3.631686 CCAAACTCAGTGTTGTTGATCCA 59.368 43.478 5.37 0.00 39.13 3.41
133 134 4.498009 CCAAACTCAGTGTTGTTGATCCAC 60.498 45.833 5.37 0.00 39.13 4.02
134 135 2.851195 ACTCAGTGTTGTTGATCCACC 58.149 47.619 0.00 0.00 0.00 4.61
135 136 2.172505 ACTCAGTGTTGTTGATCCACCA 59.827 45.455 0.00 0.00 0.00 4.17
136 137 3.181440 ACTCAGTGTTGTTGATCCACCAT 60.181 43.478 0.00 0.00 0.00 3.55
137 138 3.148412 TCAGTGTTGTTGATCCACCATG 58.852 45.455 0.00 0.00 0.00 3.66
138 139 3.148412 CAGTGTTGTTGATCCACCATGA 58.852 45.455 0.00 0.00 0.00 3.07
139 140 3.189910 CAGTGTTGTTGATCCACCATGAG 59.810 47.826 0.00 0.00 0.00 2.90
140 141 3.149196 GTGTTGTTGATCCACCATGAGT 58.851 45.455 0.00 0.00 0.00 3.41
141 142 3.569701 GTGTTGTTGATCCACCATGAGTT 59.430 43.478 0.00 0.00 0.00 3.01
142 143 4.037923 GTGTTGTTGATCCACCATGAGTTT 59.962 41.667 0.00 0.00 0.00 2.66
143 144 4.037803 TGTTGTTGATCCACCATGAGTTTG 59.962 41.667 0.00 0.00 0.00 2.93
144 145 4.097551 TGTTGATCCACCATGAGTTTGA 57.902 40.909 0.00 0.00 0.00 2.69
145 146 4.074259 TGTTGATCCACCATGAGTTTGAG 58.926 43.478 0.00 0.00 0.00 3.02
146 147 3.354948 TGATCCACCATGAGTTTGAGG 57.645 47.619 0.00 0.00 0.00 3.86
147 148 2.025981 TGATCCACCATGAGTTTGAGGG 60.026 50.000 0.00 0.00 0.00 4.30
148 149 0.698238 TCCACCATGAGTTTGAGGGG 59.302 55.000 0.00 0.00 0.00 4.79
149 150 0.323725 CCACCATGAGTTTGAGGGGG 60.324 60.000 0.00 0.00 38.58 5.40
168 169 5.625568 GGGGGTGTTAGATGTGTATAGTT 57.374 43.478 0.00 0.00 0.00 2.24
169 170 5.608449 GGGGGTGTTAGATGTGTATAGTTC 58.392 45.833 0.00 0.00 0.00 3.01
170 171 5.129815 GGGGGTGTTAGATGTGTATAGTTCA 59.870 44.000 0.00 0.00 0.00 3.18
171 172 6.183361 GGGGGTGTTAGATGTGTATAGTTCAT 60.183 42.308 0.00 0.00 0.00 2.57
172 173 7.280356 GGGGTGTTAGATGTGTATAGTTCATT 58.720 38.462 0.00 0.00 0.00 2.57
173 174 7.441458 GGGGTGTTAGATGTGTATAGTTCATTC 59.559 40.741 0.00 0.00 0.00 2.67
174 175 8.204836 GGGTGTTAGATGTGTATAGTTCATTCT 58.795 37.037 0.00 0.00 0.00 2.40
197 198 9.837681 TTCTATACATCTCCATTGTATAAGGGA 57.162 33.333 5.45 5.45 43.95 4.20
203 204 9.136323 ACATCTCCATTGTATAAGGGATTTTTC 57.864 33.333 6.04 0.00 44.93 2.29
204 205 9.359653 CATCTCCATTGTATAAGGGATTTTTCT 57.640 33.333 6.04 0.00 44.93 2.52
205 206 8.752005 TCTCCATTGTATAAGGGATTTTTCTG 57.248 34.615 6.04 0.00 44.93 3.02
206 207 7.285401 TCTCCATTGTATAAGGGATTTTTCTGC 59.715 37.037 6.04 0.00 44.93 4.26
207 208 6.894654 TCCATTGTATAAGGGATTTTTCTGCA 59.105 34.615 1.00 0.00 41.51 4.41
208 209 6.980397 CCATTGTATAAGGGATTTTTCTGCAC 59.020 38.462 0.00 0.00 40.12 4.57
209 210 7.147846 CCATTGTATAAGGGATTTTTCTGCACT 60.148 37.037 0.00 0.00 40.12 4.40
210 211 7.775053 TTGTATAAGGGATTTTTCTGCACTT 57.225 32.000 0.00 0.00 0.00 3.16
211 212 7.775053 TGTATAAGGGATTTTTCTGCACTTT 57.225 32.000 0.00 0.00 0.00 2.66
212 213 7.601856 TGTATAAGGGATTTTTCTGCACTTTG 58.398 34.615 0.00 0.00 0.00 2.77
213 214 6.670695 ATAAGGGATTTTTCTGCACTTTGT 57.329 33.333 0.00 0.00 0.00 2.83
214 215 4.590850 AGGGATTTTTCTGCACTTTGTC 57.409 40.909 0.00 0.00 0.00 3.18
215 216 3.960102 AGGGATTTTTCTGCACTTTGTCA 59.040 39.130 0.00 0.00 0.00 3.58
216 217 4.051237 GGGATTTTTCTGCACTTTGTCAC 58.949 43.478 0.00 0.00 0.00 3.67
217 218 4.441356 GGGATTTTTCTGCACTTTGTCACA 60.441 41.667 0.00 0.00 0.00 3.58
218 219 4.504097 GGATTTTTCTGCACTTTGTCACAC 59.496 41.667 0.00 0.00 0.00 3.82
219 220 4.782019 TTTTTCTGCACTTTGTCACACT 57.218 36.364 0.00 0.00 0.00 3.55
220 221 4.782019 TTTTCTGCACTTTGTCACACTT 57.218 36.364 0.00 0.00 0.00 3.16
221 222 3.763097 TTCTGCACTTTGTCACACTTG 57.237 42.857 0.00 0.00 0.00 3.16
222 223 2.710377 TCTGCACTTTGTCACACTTGT 58.290 42.857 0.00 0.00 0.00 3.16
223 224 3.867857 TCTGCACTTTGTCACACTTGTA 58.132 40.909 0.00 0.00 0.00 2.41
224 225 4.450976 TCTGCACTTTGTCACACTTGTAT 58.549 39.130 0.00 0.00 0.00 2.29
225 226 5.606505 TCTGCACTTTGTCACACTTGTATA 58.393 37.500 0.00 0.00 0.00 1.47
226 227 6.230472 TCTGCACTTTGTCACACTTGTATAT 58.770 36.000 0.00 0.00 0.00 0.86
227 228 6.147656 TCTGCACTTTGTCACACTTGTATATG 59.852 38.462 0.00 0.00 0.00 1.78
228 229 5.762711 TGCACTTTGTCACACTTGTATATGT 59.237 36.000 0.00 0.00 0.00 2.29
229 230 6.931840 TGCACTTTGTCACACTTGTATATGTA 59.068 34.615 0.00 0.00 0.00 2.29
230 231 7.095397 TGCACTTTGTCACACTTGTATATGTAC 60.095 37.037 0.00 0.00 0.00 2.90
231 232 7.117812 GCACTTTGTCACACTTGTATATGTACT 59.882 37.037 1.08 0.00 0.00 2.73
232 233 8.435430 CACTTTGTCACACTTGTATATGTACTG 58.565 37.037 1.08 0.00 0.00 2.74
233 234 7.602644 ACTTTGTCACACTTGTATATGTACTGG 59.397 37.037 1.08 0.00 0.00 4.00
234 235 5.416083 TGTCACACTTGTATATGTACTGGC 58.584 41.667 1.08 0.00 0.00 4.85
235 236 4.809426 GTCACACTTGTATATGTACTGGCC 59.191 45.833 0.00 0.00 0.00 5.36
236 237 4.714802 TCACACTTGTATATGTACTGGCCT 59.285 41.667 3.32 0.00 0.00 5.19
237 238 5.188948 TCACACTTGTATATGTACTGGCCTT 59.811 40.000 3.32 0.00 0.00 4.35
238 239 5.880332 CACACTTGTATATGTACTGGCCTTT 59.120 40.000 3.32 0.00 0.00 3.11
239 240 5.880332 ACACTTGTATATGTACTGGCCTTTG 59.120 40.000 3.32 0.00 0.00 2.77
240 241 5.296780 CACTTGTATATGTACTGGCCTTTGG 59.703 44.000 3.32 0.00 0.00 3.28
251 252 3.356814 GCCTTTGGCCCTCAGTAAA 57.643 52.632 0.00 0.00 44.06 2.01
252 253 1.627864 GCCTTTGGCCCTCAGTAAAA 58.372 50.000 0.00 0.00 44.06 1.52
253 254 1.546029 GCCTTTGGCCCTCAGTAAAAG 59.454 52.381 0.00 0.88 44.06 2.27
254 255 2.876581 CCTTTGGCCCTCAGTAAAAGT 58.123 47.619 0.00 0.00 0.00 2.66
255 256 3.230976 CCTTTGGCCCTCAGTAAAAGTT 58.769 45.455 0.00 0.00 0.00 2.66
256 257 3.641436 CCTTTGGCCCTCAGTAAAAGTTT 59.359 43.478 0.00 0.00 0.00 2.66
257 258 4.830600 CCTTTGGCCCTCAGTAAAAGTTTA 59.169 41.667 0.00 0.00 0.00 2.01
258 259 5.048013 CCTTTGGCCCTCAGTAAAAGTTTAG 60.048 44.000 0.00 0.00 0.00 1.85
259 260 4.717279 TGGCCCTCAGTAAAAGTTTAGT 57.283 40.909 0.00 0.00 0.00 2.24
260 261 5.056553 TGGCCCTCAGTAAAAGTTTAGTT 57.943 39.130 0.00 0.00 0.00 2.24
261 262 4.825085 TGGCCCTCAGTAAAAGTTTAGTTG 59.175 41.667 0.00 0.00 0.00 3.16
262 263 4.825634 GGCCCTCAGTAAAAGTTTAGTTGT 59.174 41.667 0.00 0.00 0.00 3.32
263 264 5.301045 GGCCCTCAGTAAAAGTTTAGTTGTT 59.699 40.000 0.00 0.00 0.00 2.83
264 265 6.206498 GCCCTCAGTAAAAGTTTAGTTGTTG 58.794 40.000 0.00 0.00 0.00 3.33
265 266 6.183360 GCCCTCAGTAAAAGTTTAGTTGTTGT 60.183 38.462 0.00 0.00 0.00 3.32
266 267 7.629866 GCCCTCAGTAAAAGTTTAGTTGTTGTT 60.630 37.037 0.00 0.00 0.00 2.83
267 268 8.248253 CCCTCAGTAAAAGTTTAGTTGTTGTTT 58.752 33.333 0.00 0.00 0.00 2.83
286 287 5.070001 TGTTTATCCAACAAGTTCCTCCTG 58.930 41.667 0.00 0.00 42.76 3.86
372 402 5.046591 ACATGAAAAACTCGATGAGGACCTA 60.047 40.000 0.00 0.00 33.35 3.08
390 420 6.884836 AGGACCTACAACATCTTTATTTCACC 59.115 38.462 0.00 0.00 0.00 4.02
421 451 7.177216 TCTGTGATTTGATTTTAATCTGGCTGT 59.823 33.333 4.29 0.00 36.39 4.40
425 455 8.246180 TGATTTGATTTTAATCTGGCTGTTCTC 58.754 33.333 4.29 0.00 36.39 2.87
461 492 3.323979 GTCCCTCCTATTTCCGCTAATCA 59.676 47.826 0.00 0.00 0.00 2.57
462 493 3.971305 TCCCTCCTATTTCCGCTAATCAA 59.029 43.478 0.00 0.00 0.00 2.57
463 494 4.410883 TCCCTCCTATTTCCGCTAATCAAA 59.589 41.667 0.00 0.00 0.00 2.69
464 495 4.515567 CCCTCCTATTTCCGCTAATCAAAC 59.484 45.833 0.00 0.00 0.00 2.93
465 496 4.211374 CCTCCTATTTCCGCTAATCAAACG 59.789 45.833 0.00 0.00 0.00 3.60
466 497 3.558418 TCCTATTTCCGCTAATCAAACGC 59.442 43.478 0.00 0.00 0.00 4.84
467 498 2.844122 ATTTCCGCTAATCAAACGCC 57.156 45.000 0.00 0.00 0.00 5.68
468 499 1.524848 TTTCCGCTAATCAAACGCCA 58.475 45.000 0.00 0.00 0.00 5.69
469 500 1.524848 TTCCGCTAATCAAACGCCAA 58.475 45.000 0.00 0.00 0.00 4.52
470 501 1.524848 TCCGCTAATCAAACGCCAAA 58.475 45.000 0.00 0.00 0.00 3.28
471 502 1.466950 TCCGCTAATCAAACGCCAAAG 59.533 47.619 0.00 0.00 0.00 2.77
472 503 1.259316 CGCTAATCAAACGCCAAAGC 58.741 50.000 0.00 0.00 0.00 3.51
473 504 1.135689 CGCTAATCAAACGCCAAAGCT 60.136 47.619 0.00 0.00 36.60 3.74
477 508 4.614993 GCTAATCAAACGCCAAAGCTTACA 60.615 41.667 0.00 0.00 36.60 2.41
488 519 5.177327 CGCCAAAGCTTACAAAATTCATGTT 59.823 36.000 0.00 0.00 36.60 2.71
533 564 9.750783 TTGTACTCCTACATAAACTTCTACTCT 57.249 33.333 0.00 0.00 32.70 3.24
534 565 9.175312 TGTACTCCTACATAAACTTCTACTCTG 57.825 37.037 0.00 0.00 0.00 3.35
542 573 4.931661 AAACTTCTACTCTGTTCGTCCA 57.068 40.909 0.00 0.00 0.00 4.02
554 585 6.055231 TCTGTTCGTCCAAAAATAAGTGTG 57.945 37.500 0.00 0.00 0.00 3.82
555 586 5.008217 TCTGTTCGTCCAAAAATAAGTGTGG 59.992 40.000 0.00 0.00 0.00 4.17
556 587 4.641094 TGTTCGTCCAAAAATAAGTGTGGT 59.359 37.500 0.00 0.00 32.68 4.16
568 599 9.887406 AAAAATAAGTGTGGTTGATTTAGTACG 57.113 29.630 0.00 0.00 0.00 3.67
569 600 7.605410 AATAAGTGTGGTTGATTTAGTACGG 57.395 36.000 0.00 0.00 0.00 4.02
571 602 3.068560 GTGTGGTTGATTTAGTACGGCA 58.931 45.455 0.00 0.00 0.00 5.69
578 684 2.693591 TGATTTAGTACGGCAGAGGGAG 59.306 50.000 0.00 0.00 0.00 4.30
673 779 1.785208 CAAGATGGGAGGGGATTGGAT 59.215 52.381 0.00 0.00 0.00 3.41
675 781 2.637165 AGATGGGAGGGGATTGGATAC 58.363 52.381 0.00 0.00 0.00 2.24
763 874 6.609237 ATTTTGACATCACAGTATCATCCG 57.391 37.500 0.00 0.00 0.00 4.18
779 897 0.943673 TCCGTGCATGTGTCTTTGTG 59.056 50.000 4.96 0.00 0.00 3.33
805 4877 2.882137 CAGCATGCATGTCACATCCATA 59.118 45.455 26.79 0.00 0.00 2.74
897 4969 1.143684 AGCCCAGGCAGTATACAATGG 59.856 52.381 12.03 7.10 44.88 3.16
909 4981 0.251634 TACAATGGCGACCTCATGCA 59.748 50.000 0.00 0.00 0.00 3.96
1509 6596 3.435186 GCCAAGTTCAGGCGAGGC 61.435 66.667 0.00 0.00 43.15 4.70
1708 6801 3.796443 TCGACGCGTTCCTCCTCG 61.796 66.667 15.53 10.92 0.00 4.63
1815 6908 0.538746 TGTCACAGGCAGACCGTCTA 60.539 55.000 0.00 0.00 42.76 2.59
1873 6966 5.230516 GCCGCCGTTAAGGTAATTTAATTTG 59.769 40.000 0.00 0.00 43.70 2.32
1972 7065 6.682746 AGATTCATTCGTTCATATCTAGCGT 58.317 36.000 0.00 0.00 0.00 5.07
2074 7174 1.035385 TGCAGCGCTAGTGCTACCTA 61.035 55.000 29.33 13.52 45.23 3.08
2075 7175 0.318275 GCAGCGCTAGTGCTACCTAG 60.318 60.000 29.33 17.84 45.23 3.02
2076 7176 1.025812 CAGCGCTAGTGCTACCTAGT 58.974 55.000 29.33 4.19 45.23 2.57
2077 7177 2.219458 CAGCGCTAGTGCTACCTAGTA 58.781 52.381 29.33 0.00 45.23 1.82
2104 7204 3.830744 TTGGAGTCCTCGTCAGAAAAA 57.169 42.857 11.33 0.00 0.00 1.94
2105 7205 3.107642 TGGAGTCCTCGTCAGAAAAAC 57.892 47.619 11.33 0.00 0.00 2.43
2106 7206 2.432874 TGGAGTCCTCGTCAGAAAAACA 59.567 45.455 11.33 0.00 0.00 2.83
2223 7323 4.765273 TCAGCTTAATTTGCACGGATCTA 58.235 39.130 0.00 0.00 0.00 1.98
2228 7328 5.522460 GCTTAATTTGCACGGATCTAGTACA 59.478 40.000 0.00 0.00 0.00 2.90
2229 7329 6.202954 GCTTAATTTGCACGGATCTAGTACAT 59.797 38.462 0.00 0.00 0.00 2.29
2440 7540 3.497103 ATGATATGCAGCAGCTGGTTA 57.503 42.857 24.13 8.97 42.74 2.85
2452 7552 3.661944 CAGCTGGTTAGAGCATATGAGG 58.338 50.000 5.57 0.00 41.83 3.86
2878 7987 1.153549 GACTGGCGACATGGAGACC 60.154 63.158 0.00 0.00 41.51 3.85
2947 8059 1.141858 GAATGGGAGAGGGTGATGACC 59.858 57.143 0.00 0.00 42.27 4.02
3181 8293 4.847444 GAGCTCCGCTTCCTGGCC 62.847 72.222 0.87 0.00 39.88 5.36
3343 8455 0.179097 GGCTCGTGGAGACCTTCATC 60.179 60.000 0.00 0.00 30.04 2.92
3629 8756 2.588439 GCAGCCTGAGCAGGATCA 59.412 61.111 20.29 0.00 45.52 2.92
3817 8944 3.958147 CTGCGAGGACATGGCGGTT 62.958 63.158 0.00 0.00 34.50 4.44
3830 8957 1.566018 GGCGGTTGTCAAGTCCTTCG 61.566 60.000 0.00 0.00 0.00 3.79
4084 9239 8.307483 TGTTCAAAGGAAAAACAAACACTCATA 58.693 29.630 0.00 0.00 34.13 2.15
4230 9385 2.547634 CCACGTTGATCATCACACAACA 59.452 45.455 0.00 0.00 42.37 3.33
4459 9617 2.282110 CCACGCCCAACATCACCA 60.282 61.111 0.00 0.00 0.00 4.17
4581 9739 6.524734 TGCAAATATCCAGTACCACTAGATG 58.475 40.000 0.00 0.00 29.64 2.90
4603 9761 4.883585 TGTGTCACTTGCTCAAAATCTTCT 59.116 37.500 4.27 0.00 0.00 2.85
4625 9783 8.038902 CTTCTAAAAGAATTAGCGCAACACGAA 61.039 37.037 11.47 0.00 37.53 3.85
4732 9891 9.559958 CGCTAATTGAAGTGTAATCTTTTTGAT 57.440 29.630 0.00 0.00 36.89 2.57
4770 9929 5.329399 TCCTTTGCTAGCCCAAGAAATTTA 58.671 37.500 20.35 0.00 0.00 1.40
4902 10068 0.696143 TTTGGTCCTGGTCCTGGTCA 60.696 55.000 14.11 10.99 0.00 4.02
4909 10075 2.048503 GGTCCTGGTCAACGTCCG 60.049 66.667 0.00 0.00 0.00 4.79
4985 10151 6.599638 ACATACCCTTGCTTCTCAAAGTTATC 59.400 38.462 0.00 0.00 34.79 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.118410 GAGAGTATGATCCTGCACAACAG 58.882 47.826 0.00 0.00 46.77 3.16
4 5 3.429410 CGAGAGTATGATCCTGCACAACA 60.429 47.826 0.00 0.00 0.00 3.33
5 6 3.119291 CGAGAGTATGATCCTGCACAAC 58.881 50.000 0.00 0.00 0.00 3.32
6 7 2.481969 GCGAGAGTATGATCCTGCACAA 60.482 50.000 0.00 0.00 0.00 3.33
7 8 1.067669 GCGAGAGTATGATCCTGCACA 59.932 52.381 0.00 0.00 0.00 4.57
8 9 1.339610 AGCGAGAGTATGATCCTGCAC 59.660 52.381 0.00 0.00 0.00 4.57
9 10 1.611006 GAGCGAGAGTATGATCCTGCA 59.389 52.381 0.00 0.00 0.00 4.41
10 11 1.885887 AGAGCGAGAGTATGATCCTGC 59.114 52.381 0.00 0.00 0.00 4.85
11 12 3.567585 TGAAGAGCGAGAGTATGATCCTG 59.432 47.826 0.00 0.00 0.00 3.86
12 13 3.568007 GTGAAGAGCGAGAGTATGATCCT 59.432 47.826 0.00 0.00 0.00 3.24
13 14 3.568007 AGTGAAGAGCGAGAGTATGATCC 59.432 47.826 0.00 0.00 0.00 3.36
14 15 4.829064 AGTGAAGAGCGAGAGTATGATC 57.171 45.455 0.00 0.00 0.00 2.92
15 16 5.767665 ACATAGTGAAGAGCGAGAGTATGAT 59.232 40.000 0.00 0.00 0.00 2.45
16 17 5.008118 CACATAGTGAAGAGCGAGAGTATGA 59.992 44.000 0.00 0.00 35.23 2.15
17 18 5.211454 CACATAGTGAAGAGCGAGAGTATG 58.789 45.833 0.00 0.00 35.23 2.39
18 19 4.261405 GCACATAGTGAAGAGCGAGAGTAT 60.261 45.833 0.58 0.00 35.23 2.12
19 20 3.065510 GCACATAGTGAAGAGCGAGAGTA 59.934 47.826 0.58 0.00 35.23 2.59
20 21 2.159310 GCACATAGTGAAGAGCGAGAGT 60.159 50.000 0.58 0.00 35.23 3.24
21 22 2.458951 GCACATAGTGAAGAGCGAGAG 58.541 52.381 0.58 0.00 35.23 3.20
22 23 1.135139 GGCACATAGTGAAGAGCGAGA 59.865 52.381 0.58 0.00 35.23 4.04
23 24 1.565305 GGCACATAGTGAAGAGCGAG 58.435 55.000 0.58 0.00 35.23 5.03
24 25 0.175760 GGGCACATAGTGAAGAGCGA 59.824 55.000 0.58 0.00 35.23 4.93
25 26 0.176680 AGGGCACATAGTGAAGAGCG 59.823 55.000 0.58 0.00 35.23 5.03
26 27 1.484240 AGAGGGCACATAGTGAAGAGC 59.516 52.381 0.58 0.00 35.23 4.09
27 28 2.762887 TCAGAGGGCACATAGTGAAGAG 59.237 50.000 0.58 0.00 35.23 2.85
28 29 2.762887 CTCAGAGGGCACATAGTGAAGA 59.237 50.000 0.58 0.00 35.23 2.87
29 30 2.499289 ACTCAGAGGGCACATAGTGAAG 59.501 50.000 1.53 0.00 35.23 3.02
30 31 2.540383 ACTCAGAGGGCACATAGTGAA 58.460 47.619 1.53 0.00 35.23 3.18
31 32 2.238084 ACTCAGAGGGCACATAGTGA 57.762 50.000 1.53 0.00 35.23 3.41
32 33 3.195610 TGTAACTCAGAGGGCACATAGTG 59.804 47.826 1.53 0.00 36.51 2.74
33 34 3.441101 TGTAACTCAGAGGGCACATAGT 58.559 45.455 1.53 0.00 0.00 2.12
34 35 3.449018 ACTGTAACTCAGAGGGCACATAG 59.551 47.826 1.53 0.00 46.27 2.23
35 36 3.441101 ACTGTAACTCAGAGGGCACATA 58.559 45.455 1.53 0.00 46.27 2.29
36 37 2.260822 ACTGTAACTCAGAGGGCACAT 58.739 47.619 1.53 0.00 46.27 3.21
37 38 1.717032 ACTGTAACTCAGAGGGCACA 58.283 50.000 1.53 1.94 46.27 4.57
38 39 2.841442 AACTGTAACTCAGAGGGCAC 57.159 50.000 1.53 0.00 46.27 5.01
39 40 2.233922 GCTAACTGTAACTCAGAGGGCA 59.766 50.000 1.53 0.00 46.27 5.36
40 41 2.498078 AGCTAACTGTAACTCAGAGGGC 59.502 50.000 1.53 3.19 46.27 5.19
41 42 3.764434 TCAGCTAACTGTAACTCAGAGGG 59.236 47.826 1.53 0.00 46.27 4.30
42 43 4.461081 AGTCAGCTAACTGTAACTCAGAGG 59.539 45.833 1.53 0.00 46.27 3.69
43 44 5.637006 AGTCAGCTAACTGTAACTCAGAG 57.363 43.478 0.00 0.00 46.27 3.35
44 45 5.770663 AGAAGTCAGCTAACTGTAACTCAGA 59.229 40.000 0.00 0.00 46.27 3.27
46 47 6.040504 TGAAGAAGTCAGCTAACTGTAACTCA 59.959 38.462 0.00 0.00 44.77 3.41
47 48 6.363896 GTGAAGAAGTCAGCTAACTGTAACTC 59.636 42.308 0.00 0.00 44.77 3.01
48 49 6.217294 GTGAAGAAGTCAGCTAACTGTAACT 58.783 40.000 0.00 0.00 44.77 2.24
49 50 5.117287 CGTGAAGAAGTCAGCTAACTGTAAC 59.883 44.000 0.00 0.00 44.77 2.50
50 51 5.009310 TCGTGAAGAAGTCAGCTAACTGTAA 59.991 40.000 0.00 0.00 44.77 2.41
51 52 4.517832 TCGTGAAGAAGTCAGCTAACTGTA 59.482 41.667 0.00 0.00 44.77 2.74
52 53 3.318275 TCGTGAAGAAGTCAGCTAACTGT 59.682 43.478 0.00 0.00 44.77 3.55
53 54 3.902150 TCGTGAAGAAGTCAGCTAACTG 58.098 45.455 0.00 0.00 45.95 3.16
54 55 4.585955 TTCGTGAAGAAGTCAGCTAACT 57.414 40.909 0.00 0.00 36.74 2.24
65 66 1.412710 AGTCTGTGCCTTCGTGAAGAA 59.587 47.619 11.11 0.00 40.79 2.52
66 67 1.000163 GAGTCTGTGCCTTCGTGAAGA 60.000 52.381 11.11 0.00 40.79 2.87
67 68 1.423395 GAGTCTGTGCCTTCGTGAAG 58.577 55.000 2.57 2.57 38.14 3.02
68 69 0.318699 CGAGTCTGTGCCTTCGTGAA 60.319 55.000 0.00 0.00 0.00 3.18
69 70 1.170290 TCGAGTCTGTGCCTTCGTGA 61.170 55.000 0.00 0.00 34.83 4.35
70 71 0.730834 CTCGAGTCTGTGCCTTCGTG 60.731 60.000 3.62 0.00 34.83 4.35
71 72 1.173444 ACTCGAGTCTGTGCCTTCGT 61.173 55.000 13.58 0.00 34.83 3.85
72 73 0.730834 CACTCGAGTCTGTGCCTTCG 60.731 60.000 16.96 0.00 34.56 3.79
73 74 0.315568 ACACTCGAGTCTGTGCCTTC 59.684 55.000 16.96 0.00 37.68 3.46
74 75 1.542030 CTACACTCGAGTCTGTGCCTT 59.458 52.381 16.96 0.00 37.68 4.35
75 76 1.169577 CTACACTCGAGTCTGTGCCT 58.830 55.000 16.96 0.00 37.68 4.75
76 77 0.456995 GCTACACTCGAGTCTGTGCC 60.457 60.000 16.96 3.89 37.68 5.01
77 78 0.241213 TGCTACACTCGAGTCTGTGC 59.759 55.000 16.96 17.12 37.68 4.57
78 79 2.524034 CATGCTACACTCGAGTCTGTG 58.476 52.381 16.96 8.13 39.80 3.66
79 80 1.474478 CCATGCTACACTCGAGTCTGT 59.526 52.381 16.96 14.41 0.00 3.41
80 81 1.202348 CCCATGCTACACTCGAGTCTG 60.202 57.143 16.96 8.42 0.00 3.51
81 82 1.107114 CCCATGCTACACTCGAGTCT 58.893 55.000 16.96 6.88 0.00 3.24
82 83 0.818296 ACCCATGCTACACTCGAGTC 59.182 55.000 16.96 4.94 0.00 3.36
83 84 1.267121 AACCCATGCTACACTCGAGT 58.733 50.000 13.58 13.58 0.00 4.18
84 85 2.386661 AAACCCATGCTACACTCGAG 57.613 50.000 11.84 11.84 0.00 4.04
85 86 2.614481 GGAAAACCCATGCTACACTCGA 60.614 50.000 0.00 0.00 34.14 4.04
86 87 1.737793 GGAAAACCCATGCTACACTCG 59.262 52.381 0.00 0.00 34.14 4.18
87 88 3.010420 GAGGAAAACCCATGCTACACTC 58.990 50.000 0.00 0.00 37.41 3.51
88 89 2.644798 AGAGGAAAACCCATGCTACACT 59.355 45.455 0.00 0.00 37.41 3.55
89 90 3.010420 GAGAGGAAAACCCATGCTACAC 58.990 50.000 0.00 0.00 37.41 2.90
90 91 2.026262 GGAGAGGAAAACCCATGCTACA 60.026 50.000 0.00 0.00 37.41 2.74
91 92 2.026262 TGGAGAGGAAAACCCATGCTAC 60.026 50.000 0.00 0.00 37.41 3.58
92 93 2.274542 TGGAGAGGAAAACCCATGCTA 58.725 47.619 0.00 0.00 37.41 3.49
93 94 1.075601 TGGAGAGGAAAACCCATGCT 58.924 50.000 0.00 0.00 37.41 3.79
94 95 1.923356 TTGGAGAGGAAAACCCATGC 58.077 50.000 0.00 0.00 37.41 4.06
95 96 3.500343 AGTTTGGAGAGGAAAACCCATG 58.500 45.455 0.00 0.00 37.04 3.66
96 97 3.140144 TGAGTTTGGAGAGGAAAACCCAT 59.860 43.478 0.00 0.00 37.04 4.00
97 98 2.512056 TGAGTTTGGAGAGGAAAACCCA 59.488 45.455 0.00 0.00 37.04 4.51
98 99 3.149981 CTGAGTTTGGAGAGGAAAACCC 58.850 50.000 0.00 0.00 37.04 4.11
99 100 3.565902 CACTGAGTTTGGAGAGGAAAACC 59.434 47.826 0.00 0.00 37.04 3.27
100 101 4.200092 ACACTGAGTTTGGAGAGGAAAAC 58.800 43.478 0.00 0.00 36.69 2.43
101 102 4.503714 ACACTGAGTTTGGAGAGGAAAA 57.496 40.909 0.00 0.00 0.00 2.29
102 103 4.199310 CAACACTGAGTTTGGAGAGGAAA 58.801 43.478 0.00 0.00 38.74 3.13
103 104 3.199946 ACAACACTGAGTTTGGAGAGGAA 59.800 43.478 10.61 0.00 38.74 3.36
104 105 2.771943 ACAACACTGAGTTTGGAGAGGA 59.228 45.455 10.61 0.00 38.74 3.71
105 106 3.199880 ACAACACTGAGTTTGGAGAGG 57.800 47.619 10.61 0.00 38.74 3.69
106 107 4.191544 TCAACAACACTGAGTTTGGAGAG 58.808 43.478 10.61 0.00 38.74 3.20
107 108 4.214986 TCAACAACACTGAGTTTGGAGA 57.785 40.909 10.61 6.39 38.74 3.71
108 109 4.023707 GGATCAACAACACTGAGTTTGGAG 60.024 45.833 10.61 4.77 38.74 3.86
109 110 3.882888 GGATCAACAACACTGAGTTTGGA 59.117 43.478 10.61 2.63 38.74 3.53
110 111 3.631686 TGGATCAACAACACTGAGTTTGG 59.368 43.478 10.61 0.00 38.74 3.28
111 112 4.498009 GGTGGATCAACAACACTGAGTTTG 60.498 45.833 1.86 6.14 38.74 2.93
112 113 3.632145 GGTGGATCAACAACACTGAGTTT 59.368 43.478 1.86 0.00 38.74 2.66
113 114 3.214328 GGTGGATCAACAACACTGAGTT 58.786 45.455 1.86 0.00 42.42 3.01
114 115 2.172505 TGGTGGATCAACAACACTGAGT 59.827 45.455 1.86 0.00 32.08 3.41
115 116 2.849942 TGGTGGATCAACAACACTGAG 58.150 47.619 1.86 0.00 32.08 3.35
116 117 3.148412 CATGGTGGATCAACAACACTGA 58.852 45.455 1.86 0.00 41.53 3.41
117 118 3.148412 TCATGGTGGATCAACAACACTG 58.852 45.455 1.86 0.00 41.53 3.66
118 119 3.181440 ACTCATGGTGGATCAACAACACT 60.181 43.478 1.86 0.00 41.53 3.55
119 120 3.149196 ACTCATGGTGGATCAACAACAC 58.851 45.455 1.86 0.00 41.53 3.32
120 121 3.507162 ACTCATGGTGGATCAACAACA 57.493 42.857 1.86 0.00 43.14 3.33
121 122 4.278170 TCAAACTCATGGTGGATCAACAAC 59.722 41.667 1.86 0.00 33.61 3.32
122 123 4.468713 TCAAACTCATGGTGGATCAACAA 58.531 39.130 1.86 0.00 33.61 2.83
123 124 4.074259 CTCAAACTCATGGTGGATCAACA 58.926 43.478 1.86 0.00 34.75 3.33
124 125 3.441572 CCTCAAACTCATGGTGGATCAAC 59.558 47.826 0.00 0.00 0.00 3.18
125 126 3.561960 CCCTCAAACTCATGGTGGATCAA 60.562 47.826 0.00 0.00 0.00 2.57
126 127 2.025981 CCCTCAAACTCATGGTGGATCA 60.026 50.000 0.00 0.00 0.00 2.92
127 128 2.648059 CCCTCAAACTCATGGTGGATC 58.352 52.381 0.00 0.00 0.00 3.36
128 129 1.285962 CCCCTCAAACTCATGGTGGAT 59.714 52.381 0.00 0.00 0.00 3.41
129 130 0.698238 CCCCTCAAACTCATGGTGGA 59.302 55.000 0.00 0.00 0.00 4.02
130 131 0.323725 CCCCCTCAAACTCATGGTGG 60.324 60.000 0.00 0.00 0.00 4.61
131 132 3.271250 CCCCCTCAAACTCATGGTG 57.729 57.895 0.00 0.00 0.00 4.17
146 147 5.129815 TGAACTATACACATCTAACACCCCC 59.870 44.000 0.00 0.00 0.00 5.40
147 148 6.229936 TGAACTATACACATCTAACACCCC 57.770 41.667 0.00 0.00 0.00 4.95
148 149 8.204836 AGAATGAACTATACACATCTAACACCC 58.795 37.037 0.00 0.00 0.00 4.61
171 172 9.837681 TCCCTTATACAATGGAGATGTATAGAA 57.162 33.333 6.52 0.00 43.42 2.10
177 178 9.136323 GAAAAATCCCTTATACAATGGAGATGT 57.864 33.333 0.00 0.00 32.68 3.06
178 179 9.359653 AGAAAAATCCCTTATACAATGGAGATG 57.640 33.333 0.00 0.00 32.68 2.90
179 180 9.359653 CAGAAAAATCCCTTATACAATGGAGAT 57.640 33.333 0.00 0.00 32.68 2.75
180 181 7.285401 GCAGAAAAATCCCTTATACAATGGAGA 59.715 37.037 0.00 0.00 32.68 3.71
181 182 7.068593 TGCAGAAAAATCCCTTATACAATGGAG 59.931 37.037 0.00 0.00 32.68 3.86
182 183 6.894654 TGCAGAAAAATCCCTTATACAATGGA 59.105 34.615 0.00 0.00 33.56 3.41
183 184 6.980397 GTGCAGAAAAATCCCTTATACAATGG 59.020 38.462 0.00 0.00 0.00 3.16
184 185 7.775120 AGTGCAGAAAAATCCCTTATACAATG 58.225 34.615 0.00 0.00 0.00 2.82
185 186 7.961326 AGTGCAGAAAAATCCCTTATACAAT 57.039 32.000 0.00 0.00 0.00 2.71
186 187 7.775053 AAGTGCAGAAAAATCCCTTATACAA 57.225 32.000 0.00 0.00 0.00 2.41
187 188 7.232534 ACAAAGTGCAGAAAAATCCCTTATACA 59.767 33.333 0.00 0.00 0.00 2.29
188 189 7.602753 ACAAAGTGCAGAAAAATCCCTTATAC 58.397 34.615 0.00 0.00 0.00 1.47
189 190 7.450014 TGACAAAGTGCAGAAAAATCCCTTATA 59.550 33.333 0.00 0.00 0.00 0.98
190 191 6.267471 TGACAAAGTGCAGAAAAATCCCTTAT 59.733 34.615 0.00 0.00 0.00 1.73
191 192 5.596361 TGACAAAGTGCAGAAAAATCCCTTA 59.404 36.000 0.00 0.00 0.00 2.69
192 193 4.405358 TGACAAAGTGCAGAAAAATCCCTT 59.595 37.500 0.00 0.00 0.00 3.95
193 194 3.960102 TGACAAAGTGCAGAAAAATCCCT 59.040 39.130 0.00 0.00 0.00 4.20
194 195 4.051237 GTGACAAAGTGCAGAAAAATCCC 58.949 43.478 0.00 0.00 0.00 3.85
195 196 4.504097 GTGTGACAAAGTGCAGAAAAATCC 59.496 41.667 0.00 0.00 0.00 3.01
196 197 5.343249 AGTGTGACAAAGTGCAGAAAAATC 58.657 37.500 0.00 0.00 0.00 2.17
197 198 5.329035 AGTGTGACAAAGTGCAGAAAAAT 57.671 34.783 0.00 0.00 0.00 1.82
198 199 4.782019 AGTGTGACAAAGTGCAGAAAAA 57.218 36.364 0.00 0.00 0.00 1.94
199 200 4.022416 ACAAGTGTGACAAAGTGCAGAAAA 60.022 37.500 0.00 0.00 0.00 2.29
200 201 3.505680 ACAAGTGTGACAAAGTGCAGAAA 59.494 39.130 0.00 0.00 0.00 2.52
201 202 3.081061 ACAAGTGTGACAAAGTGCAGAA 58.919 40.909 0.00 0.00 0.00 3.02
202 203 2.710377 ACAAGTGTGACAAAGTGCAGA 58.290 42.857 0.00 0.00 0.00 4.26
203 204 4.818534 ATACAAGTGTGACAAAGTGCAG 57.181 40.909 0.00 0.00 0.00 4.41
204 205 5.762711 ACATATACAAGTGTGACAAAGTGCA 59.237 36.000 0.00 0.00 0.00 4.57
205 206 6.241207 ACATATACAAGTGTGACAAAGTGC 57.759 37.500 0.00 0.00 0.00 4.40
206 207 8.435430 CAGTACATATACAAGTGTGACAAAGTG 58.565 37.037 0.00 0.00 33.30 3.16
207 208 7.602644 CCAGTACATATACAAGTGTGACAAAGT 59.397 37.037 0.00 0.00 33.30 2.66
208 209 7.413000 GCCAGTACATATACAAGTGTGACAAAG 60.413 40.741 0.00 0.00 33.30 2.77
209 210 6.370442 GCCAGTACATATACAAGTGTGACAAA 59.630 38.462 0.00 0.00 33.30 2.83
210 211 5.872617 GCCAGTACATATACAAGTGTGACAA 59.127 40.000 0.00 0.00 33.30 3.18
211 212 5.416083 GCCAGTACATATACAAGTGTGACA 58.584 41.667 0.00 0.00 33.30 3.58
212 213 4.809426 GGCCAGTACATATACAAGTGTGAC 59.191 45.833 0.00 0.00 33.30 3.67
213 214 4.714802 AGGCCAGTACATATACAAGTGTGA 59.285 41.667 5.01 0.00 33.30 3.58
214 215 5.023533 AGGCCAGTACATATACAAGTGTG 57.976 43.478 5.01 0.00 33.30 3.82
215 216 5.693769 AAGGCCAGTACATATACAAGTGT 57.306 39.130 5.01 0.00 33.30 3.55
216 217 5.296780 CCAAAGGCCAGTACATATACAAGTG 59.703 44.000 5.01 0.00 33.30 3.16
217 218 5.437060 CCAAAGGCCAGTACATATACAAGT 58.563 41.667 5.01 0.00 33.30 3.16
218 219 4.275936 GCCAAAGGCCAGTACATATACAAG 59.724 45.833 5.01 0.00 44.06 3.16
219 220 4.204012 GCCAAAGGCCAGTACATATACAA 58.796 43.478 5.01 0.00 44.06 2.41
220 221 3.815809 GCCAAAGGCCAGTACATATACA 58.184 45.455 5.01 0.00 44.06 2.29
234 235 2.876581 ACTTTTACTGAGGGCCAAAGG 58.123 47.619 6.18 0.00 0.00 3.11
235 236 4.937201 AAACTTTTACTGAGGGCCAAAG 57.063 40.909 6.18 8.30 0.00 2.77
236 237 5.451354 ACTAAACTTTTACTGAGGGCCAAA 58.549 37.500 6.18 0.00 0.00 3.28
237 238 5.056553 ACTAAACTTTTACTGAGGGCCAA 57.943 39.130 6.18 0.00 0.00 4.52
238 239 4.717279 ACTAAACTTTTACTGAGGGCCA 57.283 40.909 6.18 0.00 0.00 5.36
239 240 4.825634 ACAACTAAACTTTTACTGAGGGCC 59.174 41.667 0.00 0.00 0.00 5.80
240 241 6.183360 ACAACAACTAAACTTTTACTGAGGGC 60.183 38.462 0.00 0.00 0.00 5.19
241 242 7.329588 ACAACAACTAAACTTTTACTGAGGG 57.670 36.000 0.00 0.00 0.00 4.30
264 265 4.082733 GCAGGAGGAACTTGTTGGATAAAC 60.083 45.833 0.00 0.00 41.55 2.01
265 266 4.079253 GCAGGAGGAACTTGTTGGATAAA 58.921 43.478 0.00 0.00 41.55 1.40
266 267 3.686016 GCAGGAGGAACTTGTTGGATAA 58.314 45.455 0.00 0.00 41.55 1.75
267 268 2.354704 CGCAGGAGGAACTTGTTGGATA 60.355 50.000 0.00 0.00 41.55 2.59
268 269 1.611673 CGCAGGAGGAACTTGTTGGAT 60.612 52.381 0.00 0.00 41.55 3.41
269 270 0.250295 CGCAGGAGGAACTTGTTGGA 60.250 55.000 0.00 0.00 41.55 3.53
270 271 1.856265 GCGCAGGAGGAACTTGTTGG 61.856 60.000 0.30 0.00 41.55 3.77
271 272 0.886490 AGCGCAGGAGGAACTTGTTG 60.886 55.000 11.47 0.00 41.55 3.33
272 273 0.603975 GAGCGCAGGAGGAACTTGTT 60.604 55.000 11.47 0.00 41.55 2.83
273 274 1.004440 GAGCGCAGGAGGAACTTGT 60.004 57.895 11.47 0.00 41.55 3.16
274 275 0.603707 TTGAGCGCAGGAGGAACTTG 60.604 55.000 11.47 0.00 41.55 3.16
275 276 0.603975 GTTGAGCGCAGGAGGAACTT 60.604 55.000 11.47 0.00 41.55 2.66
286 287 9.724839 TGGTATAAAATTAAATTAGTTGAGCGC 57.275 29.630 0.00 0.00 0.00 5.92
372 402 8.950210 CAGACATAGGTGAAATAAAGATGTTGT 58.050 33.333 0.00 0.00 0.00 3.32
414 444 4.437239 AGAATCGTAATGAGAACAGCCAG 58.563 43.478 0.00 0.00 0.00 4.85
421 451 6.015350 GGAGGGACATAGAATCGTAATGAGAA 60.015 42.308 1.42 0.00 0.00 2.87
425 455 5.730296 AGGAGGGACATAGAATCGTAATG 57.270 43.478 0.00 0.00 0.00 1.90
461 492 5.112686 TGAATTTTGTAAGCTTTGGCGTTT 58.887 33.333 3.20 0.00 44.37 3.60
462 493 4.688021 TGAATTTTGTAAGCTTTGGCGTT 58.312 34.783 3.20 0.00 44.37 4.84
463 494 4.314740 TGAATTTTGTAAGCTTTGGCGT 57.685 36.364 3.20 0.00 44.37 5.68
464 495 4.685628 ACATGAATTTTGTAAGCTTTGGCG 59.314 37.500 3.20 0.00 44.37 5.69
465 496 6.544038 AACATGAATTTTGTAAGCTTTGGC 57.456 33.333 3.20 0.00 39.06 4.52
466 497 7.918643 ACAAACATGAATTTTGTAAGCTTTGG 58.081 30.769 3.20 0.00 43.72 3.28
467 498 9.771915 AAACAAACATGAATTTTGTAAGCTTTG 57.228 25.926 3.20 4.70 44.56 2.77
469 500 9.986833 GAAAACAAACATGAATTTTGTAAGCTT 57.013 25.926 11.90 3.48 44.56 3.74
470 501 9.160496 TGAAAACAAACATGAATTTTGTAAGCT 57.840 25.926 11.90 0.00 44.56 3.74
471 502 9.424659 CTGAAAACAAACATGAATTTTGTAAGC 57.575 29.630 11.90 6.44 44.56 3.09
477 508 8.260114 AGAGGACTGAAAACAAACATGAATTTT 58.740 29.630 0.00 0.23 0.00 1.82
488 519 5.975693 ACAAAACAGAGGACTGAAAACAA 57.024 34.783 0.00 0.00 46.03 2.83
499 530 8.095169 AGTTTATGTAGGAGTACAAAACAGAGG 58.905 37.037 16.59 0.00 42.54 3.69
531 562 5.008217 CCACACTTATTTTTGGACGAACAGA 59.992 40.000 0.00 0.00 0.00 3.41
533 564 4.641094 ACCACACTTATTTTTGGACGAACA 59.359 37.500 0.00 0.00 33.02 3.18
534 565 5.177725 ACCACACTTATTTTTGGACGAAC 57.822 39.130 0.00 0.00 33.02 3.95
542 573 9.887406 CGTACTAAATCAACCACACTTATTTTT 57.113 29.630 0.00 0.00 0.00 1.94
554 585 3.195661 CCTCTGCCGTACTAAATCAACC 58.804 50.000 0.00 0.00 0.00 3.77
555 586 3.118884 TCCCTCTGCCGTACTAAATCAAC 60.119 47.826 0.00 0.00 0.00 3.18
556 587 3.101437 TCCCTCTGCCGTACTAAATCAA 58.899 45.455 0.00 0.00 0.00 2.57
673 779 3.495193 CGCGTGCTCTAGTTAACTTGTA 58.505 45.455 14.49 1.81 0.00 2.41
675 781 1.059264 GCGCGTGCTCTAGTTAACTTG 59.941 52.381 14.49 12.21 38.39 3.16
763 874 2.903678 CGTACACAAAGACACATGCAC 58.096 47.619 0.00 0.00 0.00 4.57
827 4899 0.250467 TCTGGTTGCTCCACTGCTTC 60.250 55.000 0.00 0.00 41.93 3.86
870 4942 2.769652 TACTGCCTGGGCTGCAAAGG 62.770 60.000 16.50 13.78 42.60 3.11
897 4969 0.807667 CTACCACTGCATGAGGTCGC 60.808 60.000 7.99 0.00 40.18 5.19
938 5013 1.575244 CATGTACGCATGTGCTAGCT 58.425 50.000 17.23 0.00 45.48 3.32
1873 6966 4.045104 ACTTATTCTCATGCACGATCGTC 58.955 43.478 19.84 13.71 0.00 4.20
1945 7038 9.937175 CGCTAGATATGAACGAATGAATCTATA 57.063 33.333 0.00 0.00 0.00 1.31
1948 7041 6.682746 ACGCTAGATATGAACGAATGAATCT 58.317 36.000 0.00 0.00 0.00 2.40
1949 7042 6.936222 ACGCTAGATATGAACGAATGAATC 57.064 37.500 0.00 0.00 0.00 2.52
1950 7043 8.812147 TTAACGCTAGATATGAACGAATGAAT 57.188 30.769 0.00 0.00 0.00 2.57
1951 7044 8.637281 TTTAACGCTAGATATGAACGAATGAA 57.363 30.769 0.00 0.00 0.00 2.57
1970 7063 2.095969 TGACGCAAGCAGGAATTTAACG 60.096 45.455 0.00 0.00 45.62 3.18
1972 7065 3.146066 ACTGACGCAAGCAGGAATTTAA 58.854 40.909 0.00 0.00 42.94 1.52
2104 7204 7.778185 AGACCAAAGTCATACTACTACTTGT 57.222 36.000 0.00 0.00 46.15 3.16
2105 7205 7.485277 CGAAGACCAAAGTCATACTACTACTTG 59.515 40.741 0.00 0.00 46.15 3.16
2106 7206 7.362747 CCGAAGACCAAAGTCATACTACTACTT 60.363 40.741 0.00 0.00 46.15 2.24
2147 7247 6.157211 AGTATAATAGTGGTAACTCGCATGC 58.843 40.000 7.91 7.91 37.88 4.06
2179 7279 1.012086 ACATGCATGCTTCTACTGCG 58.988 50.000 26.53 1.32 38.75 5.18
2264 7364 2.731691 AAATCTCCCTGCACGCGTGT 62.732 55.000 36.80 14.80 0.00 4.49
2374 7474 0.745486 TGGTGAGCGCAATCTCCATG 60.745 55.000 11.47 0.00 37.80 3.66
2440 7540 2.783379 TCTGGTCCCTCATATGCTCT 57.217 50.000 0.00 0.00 0.00 4.09
2452 7552 0.755698 TGGAGAGGCGTATCTGGTCC 60.756 60.000 0.58 0.00 0.00 4.46
2741 7844 1.443194 CGTCGGTTGATTCGTCGGT 60.443 57.895 0.00 0.00 36.06 4.69
2878 7987 2.154854 TCTTCTGCTTCTTGGACGTG 57.845 50.000 0.00 0.00 0.00 4.49
3181 8293 1.834822 GACGATCCAGGGGAGGAGG 60.835 68.421 0.00 0.00 41.90 4.30
3262 8374 0.947660 CCACGATGATGATGCCGGAG 60.948 60.000 5.05 0.00 0.00 4.63
3319 8431 1.681327 GGTCTCCACGAGCCTGGTA 60.681 63.158 0.00 0.00 34.06 3.25
3523 8650 1.443872 CGCCGCGTACTTCTTCAGT 60.444 57.895 4.92 0.00 39.87 3.41
3559 8686 2.032981 CGCCAGCCACAGAAAGTTT 58.967 52.632 0.00 0.00 0.00 2.66
3629 8756 1.617018 TAGAGCCCAATCAGCTGCGT 61.617 55.000 9.47 0.00 41.75 5.24
3752 8879 2.716017 CGTCCTCCTCCTCCAGCAC 61.716 68.421 0.00 0.00 0.00 4.40
3817 8944 1.006571 GCCGACGAAGGACTTGACA 60.007 57.895 0.00 0.00 0.00 3.58
3830 8957 4.899239 CTCCCTCGCATGGCCGAC 62.899 72.222 0.00 0.00 33.12 4.79
3867 8994 0.829990 CTGCTCTTCTTCCTCCTCCC 59.170 60.000 0.00 0.00 0.00 4.30
4084 9239 8.260818 ACATTTGCTGTCTGTTGATAGTAGTAT 58.739 33.333 0.00 0.00 34.46 2.12
4213 9368 6.264832 TGTCTTTTGTTGTGTGATGATCAAC 58.735 36.000 0.00 0.00 40.91 3.18
4230 9385 4.576463 AGACAAATGAAGCGTCTGTCTTTT 59.424 37.500 14.41 0.00 43.14 2.27
4581 9739 5.429957 AGAAGATTTTGAGCAAGTGACAC 57.570 39.130 0.00 0.00 0.00 3.67
4603 9761 4.994220 TCGTGTTGCGCTAATTCTTTTA 57.006 36.364 9.73 0.00 41.07 1.52
4732 9891 6.603940 AGCAAAGGAAACCAAATATGCTTA 57.396 33.333 0.00 0.00 39.69 3.09
4747 9906 2.969821 TTTCTTGGGCTAGCAAAGGA 57.030 45.000 22.30 15.17 0.00 3.36
4770 9929 2.197465 CCCCTAAGCTCCTAACCTTGT 58.803 52.381 0.00 0.00 0.00 3.16
4919 10085 2.084546 GAGCTTAAAATGAGTGCGGGT 58.915 47.619 0.00 0.00 0.00 5.28
4921 10087 1.401905 GGGAGCTTAAAATGAGTGCGG 59.598 52.381 0.00 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.