Multiple sequence alignment - TraesCS5B01G154300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G154300 chr5B 100.000 3496 0 0 1 3496 284002722 283999227 0.000000e+00 6457.0
1 TraesCS5B01G154300 chr5B 93.852 244 7 4 1798 2041 407960793 407960558 9.220000e-96 361.0
2 TraesCS5B01G154300 chr5B 97.351 151 4 0 2934 3084 638677474 638677324 1.250000e-64 257.0
3 TraesCS5B01G154300 chr5B 100.000 49 0 0 1337 1385 284001340 284001292 1.340000e-14 91.6
4 TraesCS5B01G154300 chr5B 100.000 49 0 0 1383 1431 284001386 284001338 1.340000e-14 91.6
5 TraesCS5B01G154300 chr5A 93.145 1561 85 9 1388 2942 334745819 334744275 0.000000e+00 2270.0
6 TraesCS5B01G154300 chr5A 86.540 1419 126 30 1 1385 334747164 334745777 0.000000e+00 1502.0
7 TraesCS5B01G154300 chr5A 90.116 172 14 3 2772 2942 651511764 651511933 1.630000e-53 220.0
8 TraesCS5B01G154300 chr5D 94.872 1326 61 6 1621 2943 251955687 251954366 0.000000e+00 2065.0
9 TraesCS5B01G154300 chr5D 87.092 1410 119 35 2 1385 251957158 251955786 0.000000e+00 1537.0
10 TraesCS5B01G154300 chr5D 94.054 185 8 1 3137 3318 251954125 251953941 9.560000e-71 278.0
11 TraesCS5B01G154300 chr5D 96.711 152 3 1 1383 1534 251955834 251955685 5.790000e-63 252.0
12 TraesCS5B01G154300 chr5D 83.333 276 38 7 66 335 453783014 453782741 7.490000e-62 248.0
13 TraesCS5B01G154300 chr2A 89.537 583 54 7 1922 2499 240759815 240760395 0.000000e+00 732.0
14 TraesCS5B01G154300 chr2A 85.574 610 58 14 780 1366 240758741 240759343 2.310000e-171 612.0
15 TraesCS5B01G154300 chr2D 89.347 582 54 7 1922 2499 222647541 222648118 0.000000e+00 725.0
16 TraesCS5B01G154300 chr2D 85.878 609 60 10 780 1368 222646567 222647169 2.960000e-175 625.0
17 TraesCS5B01G154300 chr2B 89.539 564 55 4 1938 2499 346670284 346669723 0.000000e+00 712.0
18 TraesCS5B01G154300 chr2B 87.856 527 40 15 782 1298 346671229 346670717 6.460000e-167 597.0
19 TraesCS5B01G154300 chr1B 86.625 643 62 12 1 633 657317641 657318269 0.000000e+00 689.0
20 TraesCS5B01G154300 chr1B 87.634 372 15 9 659 1018 657319219 657319571 1.510000e-108 403.0
21 TraesCS5B01G154300 chr1B 87.708 301 26 4 1096 1385 657319577 657319877 1.200000e-89 340.0
22 TraesCS5B01G154300 chr1B 97.959 147 3 0 2938 3084 437865312 437865166 4.480000e-64 255.0
23 TraesCS5B01G154300 chr1B 96.000 150 5 1 2936 3084 58325290 58325141 3.490000e-60 243.0
24 TraesCS5B01G154300 chr1B 85.572 201 24 5 67 264 43282042 43282240 4.570000e-49 206.0
25 TraesCS5B01G154300 chr4B 95.444 417 15 4 1383 1799 218969893 218970305 0.000000e+00 662.0
26 TraesCS5B01G154300 chr4B 95.694 209 8 1 1178 1385 218969733 218969941 5.590000e-88 335.0
27 TraesCS5B01G154300 chr4B 92.093 215 17 0 1827 2041 218970297 218970511 1.580000e-78 303.0
28 TraesCS5B01G154300 chr4B 97.241 145 4 0 2940 3084 377940273 377940417 2.700000e-61 246.0
29 TraesCS5B01G154300 chr1A 86.466 399 20 9 631 1018 566598094 566598469 1.170000e-109 407.0
30 TraesCS5B01G154300 chr1A 88.372 301 24 3 1096 1385 566598475 566598775 5.550000e-93 351.0
31 TraesCS5B01G154300 chr4D 82.340 453 64 9 2034 2482 253867181 253866741 2.550000e-101 379.0
32 TraesCS5B01G154300 chr6A 99.286 140 1 0 2942 3081 172616213 172616352 1.610000e-63 254.0
33 TraesCS5B01G154300 chr6A 83.465 254 30 9 66 314 602635515 602635269 3.510000e-55 226.0
34 TraesCS5B01G154300 chr3B 98.601 143 2 0 2939 3081 630397339 630397481 1.610000e-63 254.0
35 TraesCS5B01G154300 chr3B 97.297 148 3 1 2940 3086 127906590 127906737 2.080000e-62 250.0
36 TraesCS5B01G154300 chr3B 80.505 277 39 10 66 335 16613665 16613397 7.650000e-47 198.0
37 TraesCS5B01G154300 chr3B 86.364 88 6 5 226 313 3087262 3087343 1.340000e-14 91.6
38 TraesCS5B01G154300 chr7B 97.917 144 3 0 2938 3081 370208137 370208280 2.080000e-62 250.0
39 TraesCS5B01G154300 chr7B 97.297 148 3 1 2938 3084 665423232 665423379 2.080000e-62 250.0
40 TraesCS5B01G154300 chr6B 86.916 214 24 4 66 277 693072654 693072443 1.620000e-58 237.0
41 TraesCS5B01G154300 chr3D 83.636 220 33 3 66 283 11780153 11779935 1.650000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G154300 chr5B 283999227 284002722 3495 True 2213.400000 6457 100.000000 1 3496 3 chr5B.!!$R3 3495
1 TraesCS5B01G154300 chr5A 334744275 334747164 2889 True 1886.000000 2270 89.842500 1 2942 2 chr5A.!!$R1 2941
2 TraesCS5B01G154300 chr5D 251953941 251957158 3217 True 1033.000000 2065 93.182250 2 3318 4 chr5D.!!$R2 3316
3 TraesCS5B01G154300 chr2A 240758741 240760395 1654 False 672.000000 732 87.555500 780 2499 2 chr2A.!!$F1 1719
4 TraesCS5B01G154300 chr2D 222646567 222648118 1551 False 675.000000 725 87.612500 780 2499 2 chr2D.!!$F1 1719
5 TraesCS5B01G154300 chr2B 346669723 346671229 1506 True 654.500000 712 88.697500 782 2499 2 chr2B.!!$R1 1717
6 TraesCS5B01G154300 chr1B 657317641 657319877 2236 False 477.333333 689 87.322333 1 1385 3 chr1B.!!$F2 1384
7 TraesCS5B01G154300 chr4B 218969733 218970511 778 False 433.333333 662 94.410333 1178 2041 3 chr4B.!!$F2 863
8 TraesCS5B01G154300 chr1A 566598094 566598775 681 False 379.000000 407 87.419000 631 1385 2 chr1A.!!$F1 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 374 0.830444 CCTGGGCTATACCTGGCGTA 60.830 60.0 0.00 0.0 41.82 4.42 F
1291 2285 0.971386 TCCCGTCGAAGCTAGGTTTT 59.029 50.0 8.87 0.0 0.00 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1412 2413 0.107993 CGTGGCATCATGACTGGAGT 60.108 55.0 0.0 0.0 31.73 3.85 R
2945 4089 0.036306 ACCCTGCCTAACCGAACAAG 59.964 55.0 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.623418 TAGTCCCTCCTGCTTCTTCA 57.377 50.000 0.00 0.00 0.00 3.02
103 105 2.362077 AGGTGCTTGCAAATTTTCGTCT 59.638 40.909 0.00 0.00 0.00 4.18
120 122 8.481974 TTTTCGTCTAAAAATATCATCCGACA 57.518 30.769 0.00 0.00 34.11 4.35
131 133 2.167662 TCATCCGACAAGCTCTACACA 58.832 47.619 0.00 0.00 0.00 3.72
138 140 3.856521 CGACAAGCTCTACACATGAGAAG 59.143 47.826 0.00 0.00 33.68 2.85
140 142 3.007290 ACAAGCTCTACACATGAGAAGCA 59.993 43.478 0.00 0.00 33.68 3.91
141 143 3.969287 AGCTCTACACATGAGAAGCAA 57.031 42.857 0.00 0.00 33.68 3.91
145 147 5.709164 AGCTCTACACATGAGAAGCAAAAAT 59.291 36.000 0.00 0.00 33.68 1.82
164 166 2.975410 TCAATGCTCAAAAGTGCTCG 57.025 45.000 0.00 0.00 0.00 5.03
207 209 4.955811 TTTTCTTGTGTAGAGCTCCTCA 57.044 40.909 10.93 7.24 33.51 3.86
285 290 8.746922 TGATGTCACAAAATTTCAGATTTAGC 57.253 30.769 0.00 0.00 0.00 3.09
350 358 1.748122 GAGCAGACATGGCCACCTG 60.748 63.158 21.10 21.10 0.00 4.00
366 374 0.830444 CCTGGGCTATACCTGGCGTA 60.830 60.000 0.00 0.00 41.82 4.42
384 392 1.468506 TATCGGCCCATTAGCTCGCA 61.469 55.000 0.00 0.00 0.00 5.10
418 426 4.740822 GGCCCCGCCTGACACATT 62.741 66.667 0.00 0.00 46.69 2.71
425 433 2.491693 CCCGCCTGACACATTGTTAAAT 59.508 45.455 0.00 0.00 0.00 1.40
468 476 2.888447 GCTGAGGCTGTGTCAGGGT 61.888 63.158 0.00 0.00 41.60 4.34
470 478 1.459348 TGAGGCTGTGTCAGGGTCA 60.459 57.895 0.00 0.00 31.21 4.02
476 484 1.152631 TGTGTCAGGGTCACGAGGA 60.153 57.895 0.00 0.00 38.48 3.71
510 518 1.753956 GGCACAACGTGACACATTTC 58.246 50.000 6.37 0.00 41.94 2.17
511 519 1.333619 GGCACAACGTGACACATTTCT 59.666 47.619 6.37 0.00 41.94 2.52
512 520 2.223479 GGCACAACGTGACACATTTCTT 60.223 45.455 6.37 0.00 41.94 2.52
513 521 3.434637 GCACAACGTGACACATTTCTTT 58.565 40.909 6.37 0.00 35.23 2.52
514 522 4.496673 GGCACAACGTGACACATTTCTTTA 60.497 41.667 6.37 0.00 41.94 1.85
515 523 5.031578 GCACAACGTGACACATTTCTTTAA 58.968 37.500 6.37 0.00 35.23 1.52
516 524 5.513495 GCACAACGTGACACATTTCTTTAAA 59.487 36.000 6.37 0.00 35.23 1.52
517 525 6.034044 GCACAACGTGACACATTTCTTTAAAA 59.966 34.615 6.37 0.00 35.23 1.52
570 592 1.003959 CCCAAATGGCCCAAAACCG 60.004 57.895 0.00 0.00 0.00 4.44
1196 2181 5.221441 GCTGGGTACATGTATGTCTGTGATA 60.221 44.000 9.18 0.00 41.97 2.15
1291 2285 0.971386 TCCCGTCGAAGCTAGGTTTT 59.029 50.000 8.87 0.00 0.00 2.43
1385 2386 1.283347 ACTCCAGTCATGATGCCACT 58.717 50.000 0.00 0.00 0.00 4.00
1386 2387 1.632409 ACTCCAGTCATGATGCCACTT 59.368 47.619 0.00 0.00 0.00 3.16
1387 2388 2.014857 CTCCAGTCATGATGCCACTTG 58.985 52.381 0.00 0.00 0.00 3.16
1388 2389 1.100510 CCAGTCATGATGCCACTTGG 58.899 55.000 0.00 0.00 38.53 3.61
1389 2390 1.615116 CCAGTCATGATGCCACTTGGT 60.615 52.381 0.00 0.00 37.57 3.67
1390 2391 1.741706 CAGTCATGATGCCACTTGGTC 59.258 52.381 0.00 0.00 37.57 4.02
1391 2392 1.632409 AGTCATGATGCCACTTGGTCT 59.368 47.619 0.00 0.00 37.57 3.85
1392 2393 2.040813 AGTCATGATGCCACTTGGTCTT 59.959 45.455 0.00 0.00 37.57 3.01
1393 2394 2.821969 GTCATGATGCCACTTGGTCTTT 59.178 45.455 0.00 0.00 37.57 2.52
1394 2395 3.256631 GTCATGATGCCACTTGGTCTTTT 59.743 43.478 0.00 0.00 37.57 2.27
1395 2396 3.256383 TCATGATGCCACTTGGTCTTTTG 59.744 43.478 0.00 0.00 37.57 2.44
1396 2397 1.962807 TGATGCCACTTGGTCTTTTGG 59.037 47.619 0.00 0.00 37.57 3.28
1397 2398 2.238521 GATGCCACTTGGTCTTTTGGA 58.761 47.619 0.00 0.00 37.57 3.53
1398 2399 2.151502 TGCCACTTGGTCTTTTGGAA 57.848 45.000 0.00 0.00 37.57 3.53
1399 2400 1.754226 TGCCACTTGGTCTTTTGGAAC 59.246 47.619 0.00 0.00 37.57 3.62
1400 2401 1.754226 GCCACTTGGTCTTTTGGAACA 59.246 47.619 0.00 0.00 40.31 3.18
1401 2402 2.223805 GCCACTTGGTCTTTTGGAACAG 60.224 50.000 0.00 0.00 43.17 3.16
1402 2403 3.287222 CCACTTGGTCTTTTGGAACAGA 58.713 45.455 0.00 0.00 43.17 3.41
1403 2404 3.891366 CCACTTGGTCTTTTGGAACAGAT 59.109 43.478 0.00 0.00 43.17 2.90
1404 2405 4.022849 CCACTTGGTCTTTTGGAACAGATC 60.023 45.833 0.00 0.00 43.17 2.75
1405 2406 4.823989 CACTTGGTCTTTTGGAACAGATCT 59.176 41.667 0.00 0.00 43.17 2.75
1406 2407 4.823989 ACTTGGTCTTTTGGAACAGATCTG 59.176 41.667 21.37 21.37 43.17 2.90
1407 2408 4.705110 TGGTCTTTTGGAACAGATCTGA 57.295 40.909 29.27 3.48 42.39 3.27
1408 2409 5.047566 TGGTCTTTTGGAACAGATCTGAA 57.952 39.130 29.27 10.05 42.39 3.02
1409 2410 4.821805 TGGTCTTTTGGAACAGATCTGAAC 59.178 41.667 29.27 19.67 42.39 3.18
1410 2411 5.066593 GGTCTTTTGGAACAGATCTGAACT 58.933 41.667 29.27 12.60 42.39 3.01
1411 2412 5.532779 GGTCTTTTGGAACAGATCTGAACTT 59.467 40.000 29.27 13.11 42.39 2.66
1412 2413 6.710744 GGTCTTTTGGAACAGATCTGAACTTA 59.289 38.462 29.27 8.42 42.39 2.24
1413 2414 7.308049 GGTCTTTTGGAACAGATCTGAACTTAC 60.308 40.741 29.27 14.11 42.39 2.34
1414 2415 7.442666 GTCTTTTGGAACAGATCTGAACTTACT 59.557 37.037 29.27 1.44 42.39 2.24
1415 2416 7.657761 TCTTTTGGAACAGATCTGAACTTACTC 59.342 37.037 29.27 12.02 42.39 2.59
1416 2417 5.407407 TGGAACAGATCTGAACTTACTCC 57.593 43.478 29.27 19.11 0.00 3.85
1417 2418 4.838423 TGGAACAGATCTGAACTTACTCCA 59.162 41.667 29.27 21.01 0.00 3.86
1418 2419 5.047021 TGGAACAGATCTGAACTTACTCCAG 60.047 44.000 29.27 0.00 0.00 3.86
1419 2420 5.046950 GGAACAGATCTGAACTTACTCCAGT 60.047 44.000 29.27 0.00 0.00 4.00
1420 2421 5.652994 ACAGATCTGAACTTACTCCAGTC 57.347 43.478 29.27 0.00 0.00 3.51
1421 2422 5.080337 ACAGATCTGAACTTACTCCAGTCA 58.920 41.667 29.27 0.00 0.00 3.41
1422 2423 5.719085 ACAGATCTGAACTTACTCCAGTCAT 59.281 40.000 29.27 0.00 0.00 3.06
1423 2424 6.041511 CAGATCTGAACTTACTCCAGTCATG 58.958 44.000 18.34 0.00 0.00 3.07
1424 2425 5.954752 AGATCTGAACTTACTCCAGTCATGA 59.045 40.000 0.00 0.00 0.00 3.07
1425 2426 6.610830 AGATCTGAACTTACTCCAGTCATGAT 59.389 38.462 0.00 0.00 0.00 2.45
1426 2427 5.970592 TCTGAACTTACTCCAGTCATGATG 58.029 41.667 0.00 0.00 0.00 3.07
1427 2428 4.507710 TGAACTTACTCCAGTCATGATGC 58.492 43.478 0.00 0.00 0.00 3.91
1428 2429 3.550437 ACTTACTCCAGTCATGATGCC 57.450 47.619 0.00 0.00 0.00 4.40
1429 2430 2.840038 ACTTACTCCAGTCATGATGCCA 59.160 45.455 0.00 0.00 0.00 4.92
1430 2431 2.988010 TACTCCAGTCATGATGCCAC 57.012 50.000 0.00 0.00 0.00 5.01
1443 2444 2.360483 TGATGCCACGAACACATGTTTT 59.640 40.909 0.00 0.00 38.56 2.43
1494 2495 6.147328 GGTTGTCTCTTGTGTTATCTACCAAC 59.853 42.308 0.00 0.00 0.00 3.77
1540 2635 1.068333 CATTGCCCGGTTGTTTCTGAG 60.068 52.381 0.00 0.00 0.00 3.35
1541 2636 0.106918 TTGCCCGGTTGTTTCTGAGT 60.107 50.000 0.00 0.00 0.00 3.41
1542 2637 0.759959 TGCCCGGTTGTTTCTGAGTA 59.240 50.000 0.00 0.00 0.00 2.59
1543 2638 1.154197 GCCCGGTTGTTTCTGAGTAC 58.846 55.000 0.00 0.00 0.00 2.73
1563 2658 3.945346 ACGTAGTAATTTGGACCATGCA 58.055 40.909 0.00 0.00 41.94 3.96
1601 2698 3.991773 TGAAACTTATGTACTGCGGACAC 59.008 43.478 0.00 0.00 0.00 3.67
1877 3002 7.171447 TGTAATTTTTGTTGCTTCGATTTGG 57.829 32.000 0.00 0.00 0.00 3.28
2193 3334 2.291209 TGATGTGTGGAAATGGCTGT 57.709 45.000 0.00 0.00 0.00 4.40
2378 3519 2.254350 CTTCGCGGACTCACGTCA 59.746 61.111 6.13 0.00 42.05 4.35
2441 3582 1.672356 CCACAAGAACAGGCCCTCG 60.672 63.158 0.00 0.00 0.00 4.63
2503 3644 1.818363 GCTACCGTTAAGCTGCCCC 60.818 63.158 0.00 0.00 37.01 5.80
2524 3665 4.516698 CCCATGCACACCTTGATAGTATTC 59.483 45.833 0.00 0.00 0.00 1.75
2531 3673 6.128391 GCACACCTTGATAGTATTCGTTTGAA 60.128 38.462 0.00 0.00 38.76 2.69
2560 3702 4.825085 AGATTTTGCTACCTTTGTTCGGAA 59.175 37.500 0.00 0.00 0.00 4.30
2600 3743 3.695830 AGAACCTTTATGTCGAGGCAA 57.304 42.857 0.00 0.00 36.48 4.52
2644 3787 2.571212 TGCCTGTGTTACCAGAACAAG 58.429 47.619 3.10 0.00 34.23 3.16
2647 3790 3.810743 GCCTGTGTTACCAGAACAAGGAT 60.811 47.826 16.23 0.00 33.88 3.24
2650 3793 5.063204 CTGTGTTACCAGAACAAGGATTGA 58.937 41.667 0.00 0.00 40.96 2.57
2651 3794 5.530915 CTGTGTTACCAGAACAAGGATTGAA 59.469 40.000 0.00 0.00 40.96 2.69
2678 3821 2.223537 TCGTATGCTGTGTGCTATGG 57.776 50.000 0.00 0.00 43.37 2.74
2694 3837 4.639755 TGCTATGGTGTCATATGTTTGGTG 59.360 41.667 1.90 0.00 35.53 4.17
2698 3841 4.219115 TGGTGTCATATGTTTGGTGGTTT 58.781 39.130 1.90 0.00 0.00 3.27
2776 3919 4.458989 TGCTTGTTTTCATCTGGGTGATAC 59.541 41.667 0.00 0.00 33.36 2.24
2782 3925 5.692115 TTTCATCTGGGTGATACTGCTTA 57.308 39.130 0.00 0.00 33.36 3.09
2794 3937 6.313164 GGTGATACTGCTTACTACTGGTTTTC 59.687 42.308 0.00 0.00 0.00 2.29
2809 3952 7.039313 ACTGGTTTTCTCTTAAATGTTGGTC 57.961 36.000 0.00 0.00 0.00 4.02
2815 3958 6.899393 TTCTCTTAAATGTTGGTCTGCAAT 57.101 33.333 0.00 0.00 0.00 3.56
2867 4011 6.149973 TCTCTGTGGCTCAAATATGAAAGTTG 59.850 38.462 0.00 0.00 34.49 3.16
2904 4048 6.264518 TCTGCTAATTCTTTCGGGTTTCTTTT 59.735 34.615 0.00 0.00 0.00 2.27
2905 4049 6.443792 TGCTAATTCTTTCGGGTTTCTTTTC 58.556 36.000 0.00 0.00 0.00 2.29
2906 4050 6.039941 TGCTAATTCTTTCGGGTTTCTTTTCA 59.960 34.615 0.00 0.00 0.00 2.69
2907 4051 6.921307 GCTAATTCTTTCGGGTTTCTTTTCAA 59.079 34.615 0.00 0.00 0.00 2.69
2913 4057 2.685897 TCGGGTTTCTTTTCAACCACTG 59.314 45.455 4.30 0.00 45.00 3.66
2919 4063 3.644966 TCTTTTCAACCACTGGACAGT 57.355 42.857 0.71 0.00 43.61 3.55
2942 4086 3.553096 GGATATGCTCGTGTCCACCTAAG 60.553 52.174 0.69 0.00 30.44 2.18
2943 4087 0.537188 ATGCTCGTGTCCACCTAAGG 59.463 55.000 0.00 0.00 0.00 2.69
2944 4088 1.448013 GCTCGTGTCCACCTAAGGC 60.448 63.158 0.00 0.00 0.00 4.35
2945 4089 1.218316 CTCGTGTCCACCTAAGGCC 59.782 63.158 0.00 0.00 0.00 5.19
2946 4090 1.229082 TCGTGTCCACCTAAGGCCT 60.229 57.895 0.00 0.00 0.00 5.19
2947 4091 0.834687 TCGTGTCCACCTAAGGCCTT 60.835 55.000 24.18 24.18 0.00 4.35
2948 4092 0.673644 CGTGTCCACCTAAGGCCTTG 60.674 60.000 28.77 14.84 0.00 3.61
2949 4093 0.400594 GTGTCCACCTAAGGCCTTGT 59.599 55.000 28.77 15.56 0.00 3.16
2950 4094 1.145571 TGTCCACCTAAGGCCTTGTT 58.854 50.000 28.77 8.90 0.00 2.83
2951 4095 1.073284 TGTCCACCTAAGGCCTTGTTC 59.927 52.381 28.77 10.94 0.00 3.18
2952 4096 0.323629 TCCACCTAAGGCCTTGTTCG 59.676 55.000 28.77 13.97 0.00 3.95
2953 4097 0.676782 CCACCTAAGGCCTTGTTCGG 60.677 60.000 28.77 22.31 0.00 4.30
2954 4098 0.036306 CACCTAAGGCCTTGTTCGGT 59.964 55.000 28.77 22.92 0.00 4.69
2955 4099 0.769247 ACCTAAGGCCTTGTTCGGTT 59.231 50.000 28.77 0.57 0.00 4.44
2956 4100 1.980036 ACCTAAGGCCTTGTTCGGTTA 59.020 47.619 28.77 4.02 0.00 2.85
2957 4101 2.027469 ACCTAAGGCCTTGTTCGGTTAG 60.027 50.000 28.77 14.10 0.00 2.34
2958 4102 2.629051 CTAAGGCCTTGTTCGGTTAGG 58.371 52.381 28.77 1.55 0.00 2.69
2962 4106 2.854522 CCTTGTTCGGTTAGGCAGG 58.145 57.895 0.00 0.00 0.00 4.85
2963 4107 0.676782 CCTTGTTCGGTTAGGCAGGG 60.677 60.000 0.00 0.00 0.00 4.45
2964 4108 0.036306 CTTGTTCGGTTAGGCAGGGT 59.964 55.000 0.00 0.00 0.00 4.34
2965 4109 0.475044 TTGTTCGGTTAGGCAGGGTT 59.525 50.000 0.00 0.00 0.00 4.11
2966 4110 0.475044 TGTTCGGTTAGGCAGGGTTT 59.525 50.000 0.00 0.00 0.00 3.27
2967 4111 0.879090 GTTCGGTTAGGCAGGGTTTG 59.121 55.000 0.00 0.00 0.00 2.93
2968 4112 0.250989 TTCGGTTAGGCAGGGTTTGG 60.251 55.000 0.00 0.00 0.00 3.28
2969 4113 1.128809 TCGGTTAGGCAGGGTTTGGA 61.129 55.000 0.00 0.00 0.00 3.53
2970 4114 0.676782 CGGTTAGGCAGGGTTTGGAG 60.677 60.000 0.00 0.00 0.00 3.86
2971 4115 0.404426 GGTTAGGCAGGGTTTGGAGT 59.596 55.000 0.00 0.00 0.00 3.85
2972 4116 1.534729 GTTAGGCAGGGTTTGGAGTG 58.465 55.000 0.00 0.00 0.00 3.51
2973 4117 0.404040 TTAGGCAGGGTTTGGAGTGG 59.596 55.000 0.00 0.00 0.00 4.00
2974 4118 0.770557 TAGGCAGGGTTTGGAGTGGT 60.771 55.000 0.00 0.00 0.00 4.16
2975 4119 1.152546 GGCAGGGTTTGGAGTGGTT 60.153 57.895 0.00 0.00 0.00 3.67
2976 4120 0.759060 GGCAGGGTTTGGAGTGGTTT 60.759 55.000 0.00 0.00 0.00 3.27
2977 4121 0.389025 GCAGGGTTTGGAGTGGTTTG 59.611 55.000 0.00 0.00 0.00 2.93
2978 4122 2.026905 GCAGGGTTTGGAGTGGTTTGA 61.027 52.381 0.00 0.00 0.00 2.69
2979 4123 2.383855 CAGGGTTTGGAGTGGTTTGAA 58.616 47.619 0.00 0.00 0.00 2.69
2980 4124 2.763448 CAGGGTTTGGAGTGGTTTGAAA 59.237 45.455 0.00 0.00 0.00 2.69
2981 4125 3.031013 AGGGTTTGGAGTGGTTTGAAAG 58.969 45.455 0.00 0.00 0.00 2.62
2982 4126 2.102420 GGGTTTGGAGTGGTTTGAAAGG 59.898 50.000 0.00 0.00 0.00 3.11
2983 4127 2.102420 GGTTTGGAGTGGTTTGAAAGGG 59.898 50.000 0.00 0.00 0.00 3.95
2984 4128 3.028130 GTTTGGAGTGGTTTGAAAGGGA 58.972 45.455 0.00 0.00 0.00 4.20
2985 4129 3.611025 TTGGAGTGGTTTGAAAGGGAT 57.389 42.857 0.00 0.00 0.00 3.85
2986 4130 3.611025 TGGAGTGGTTTGAAAGGGATT 57.389 42.857 0.00 0.00 0.00 3.01
2987 4131 3.230134 TGGAGTGGTTTGAAAGGGATTG 58.770 45.455 0.00 0.00 0.00 2.67
2988 4132 2.562738 GGAGTGGTTTGAAAGGGATTGG 59.437 50.000 0.00 0.00 0.00 3.16
2989 4133 3.496331 GAGTGGTTTGAAAGGGATTGGA 58.504 45.455 0.00 0.00 0.00 3.53
2990 4134 3.500343 AGTGGTTTGAAAGGGATTGGAG 58.500 45.455 0.00 0.00 0.00 3.86
2991 4135 2.562738 GTGGTTTGAAAGGGATTGGAGG 59.437 50.000 0.00 0.00 0.00 4.30
2992 4136 2.179427 GGTTTGAAAGGGATTGGAGGG 58.821 52.381 0.00 0.00 0.00 4.30
2993 4137 2.179427 GTTTGAAAGGGATTGGAGGGG 58.821 52.381 0.00 0.00 0.00 4.79
2994 4138 1.766951 TTGAAAGGGATTGGAGGGGA 58.233 50.000 0.00 0.00 0.00 4.81
2995 4139 2.000290 TGAAAGGGATTGGAGGGGAT 58.000 50.000 0.00 0.00 0.00 3.85
2996 4140 2.297044 TGAAAGGGATTGGAGGGGATT 58.703 47.619 0.00 0.00 0.00 3.01
2997 4141 3.480012 TGAAAGGGATTGGAGGGGATTA 58.520 45.455 0.00 0.00 0.00 1.75
2998 4142 3.861695 TGAAAGGGATTGGAGGGGATTAA 59.138 43.478 0.00 0.00 0.00 1.40
2999 4143 4.296313 TGAAAGGGATTGGAGGGGATTAAA 59.704 41.667 0.00 0.00 0.00 1.52
3000 4144 5.042676 TGAAAGGGATTGGAGGGGATTAAAT 60.043 40.000 0.00 0.00 0.00 1.40
3001 4145 4.749048 AGGGATTGGAGGGGATTAAATC 57.251 45.455 0.00 0.00 0.00 2.17
3014 4158 5.659440 GGATTAAATCCCTTGCAAGTCAA 57.341 39.130 24.35 10.08 43.88 3.18
3015 4159 6.036577 GGATTAAATCCCTTGCAAGTCAAA 57.963 37.500 24.35 10.27 43.88 2.69
3016 4160 6.463360 GGATTAAATCCCTTGCAAGTCAAAA 58.537 36.000 24.35 11.23 43.88 2.44
3017 4161 7.105588 GGATTAAATCCCTTGCAAGTCAAAAT 58.894 34.615 24.35 14.96 43.88 1.82
3018 4162 7.278646 GGATTAAATCCCTTGCAAGTCAAAATC 59.721 37.037 24.35 20.70 43.88 2.17
3019 4163 4.541973 AATCCCTTGCAAGTCAAAATCC 57.458 40.909 24.35 0.00 33.65 3.01
3020 4164 3.243359 TCCCTTGCAAGTCAAAATCCT 57.757 42.857 24.35 0.00 33.65 3.24
3021 4165 3.575805 TCCCTTGCAAGTCAAAATCCTT 58.424 40.909 24.35 0.00 33.65 3.36
3022 4166 3.321682 TCCCTTGCAAGTCAAAATCCTTG 59.678 43.478 24.35 4.97 40.77 3.61
3023 4167 3.070015 CCCTTGCAAGTCAAAATCCTTGT 59.930 43.478 24.35 0.00 40.13 3.16
3024 4168 4.301628 CCTTGCAAGTCAAAATCCTTGTC 58.698 43.478 24.35 0.00 40.13 3.18
3025 4169 4.202141 CCTTGCAAGTCAAAATCCTTGTCA 60.202 41.667 24.35 0.00 40.13 3.58
3026 4170 4.998671 TGCAAGTCAAAATCCTTGTCAA 57.001 36.364 0.00 0.00 40.13 3.18
3027 4171 5.336150 TGCAAGTCAAAATCCTTGTCAAA 57.664 34.783 0.00 0.00 40.13 2.69
3028 4172 5.108517 TGCAAGTCAAAATCCTTGTCAAAC 58.891 37.500 0.00 0.00 40.13 2.93
3029 4173 4.507756 GCAAGTCAAAATCCTTGTCAAACC 59.492 41.667 0.00 0.00 40.13 3.27
3030 4174 5.682212 GCAAGTCAAAATCCTTGTCAAACCT 60.682 40.000 0.00 0.00 40.13 3.50
3031 4175 5.774498 AGTCAAAATCCTTGTCAAACCTC 57.226 39.130 0.00 0.00 0.00 3.85
3032 4176 5.449553 AGTCAAAATCCTTGTCAAACCTCT 58.550 37.500 0.00 0.00 0.00 3.69
3033 4177 5.532779 AGTCAAAATCCTTGTCAAACCTCTC 59.467 40.000 0.00 0.00 0.00 3.20
3034 4178 4.827284 TCAAAATCCTTGTCAAACCTCTCC 59.173 41.667 0.00 0.00 0.00 3.71
3035 4179 4.453480 AAATCCTTGTCAAACCTCTCCA 57.547 40.909 0.00 0.00 0.00 3.86
3036 4180 4.453480 AATCCTTGTCAAACCTCTCCAA 57.547 40.909 0.00 0.00 0.00 3.53
3037 4181 4.664688 ATCCTTGTCAAACCTCTCCAAT 57.335 40.909 0.00 0.00 0.00 3.16
3038 4182 4.021102 TCCTTGTCAAACCTCTCCAATC 57.979 45.455 0.00 0.00 0.00 2.67
3039 4183 3.084786 CCTTGTCAAACCTCTCCAATCC 58.915 50.000 0.00 0.00 0.00 3.01
3040 4184 2.879103 TGTCAAACCTCTCCAATCCC 57.121 50.000 0.00 0.00 0.00 3.85
3041 4185 1.354368 TGTCAAACCTCTCCAATCCCC 59.646 52.381 0.00 0.00 0.00 4.81
3042 4186 1.636003 GTCAAACCTCTCCAATCCCCT 59.364 52.381 0.00 0.00 0.00 4.79
3043 4187 1.916181 TCAAACCTCTCCAATCCCCTC 59.084 52.381 0.00 0.00 0.00 4.30
3044 4188 1.064389 CAAACCTCTCCAATCCCCTCC 60.064 57.143 0.00 0.00 0.00 4.30
3045 4189 0.121197 AACCTCTCCAATCCCCTCCA 59.879 55.000 0.00 0.00 0.00 3.86
3046 4190 0.121197 ACCTCTCCAATCCCCTCCAA 59.879 55.000 0.00 0.00 0.00 3.53
3047 4191 1.275238 ACCTCTCCAATCCCCTCCAAT 60.275 52.381 0.00 0.00 0.00 3.16
3048 4192 1.423161 CCTCTCCAATCCCCTCCAATC 59.577 57.143 0.00 0.00 0.00 2.67
3049 4193 1.423161 CTCTCCAATCCCCTCCAATCC 59.577 57.143 0.00 0.00 0.00 3.01
3050 4194 0.480252 CTCCAATCCCCTCCAATCCC 59.520 60.000 0.00 0.00 0.00 3.85
3051 4195 0.047802 TCCAATCCCCTCCAATCCCT 59.952 55.000 0.00 0.00 0.00 4.20
3052 4196 0.186873 CCAATCCCCTCCAATCCCTG 59.813 60.000 0.00 0.00 0.00 4.45
3053 4197 0.929244 CAATCCCCTCCAATCCCTGT 59.071 55.000 0.00 0.00 0.00 4.00
3054 4198 0.929244 AATCCCCTCCAATCCCTGTG 59.071 55.000 0.00 0.00 0.00 3.66
3055 4199 0.995675 ATCCCCTCCAATCCCTGTGG 60.996 60.000 0.00 0.00 37.51 4.17
3056 4200 2.276740 CCCTCCAATCCCTGTGGC 59.723 66.667 0.00 0.00 35.99 5.01
3057 4201 2.124570 CCTCCAATCCCTGTGGCG 60.125 66.667 0.00 0.00 35.99 5.69
3058 4202 2.669133 CCTCCAATCCCTGTGGCGA 61.669 63.158 0.00 0.00 35.99 5.54
3059 4203 1.153289 CTCCAATCCCTGTGGCGAG 60.153 63.158 0.00 0.00 35.99 5.03
3060 4204 2.124570 CCAATCCCTGTGGCGAGG 60.125 66.667 0.00 0.00 0.00 4.63
3066 4210 3.642078 CCTGTGGCGAGGGGATTA 58.358 61.111 0.00 0.00 0.00 1.75
3067 4211 1.912220 CCTGTGGCGAGGGGATTAA 59.088 57.895 0.00 0.00 0.00 1.40
3068 4212 0.254747 CCTGTGGCGAGGGGATTAAA 59.745 55.000 0.00 0.00 0.00 1.52
3069 4213 1.379527 CTGTGGCGAGGGGATTAAAC 58.620 55.000 0.00 0.00 0.00 2.01
3070 4214 0.391927 TGTGGCGAGGGGATTAAACG 60.392 55.000 0.00 0.00 0.00 3.60
3071 4215 0.108041 GTGGCGAGGGGATTAAACGA 60.108 55.000 0.00 0.00 0.00 3.85
3072 4216 0.614294 TGGCGAGGGGATTAAACGAA 59.386 50.000 0.00 0.00 0.00 3.85
3073 4217 1.012086 GGCGAGGGGATTAAACGAAC 58.988 55.000 0.00 0.00 0.00 3.95
3074 4218 1.676615 GGCGAGGGGATTAAACGAACA 60.677 52.381 0.00 0.00 0.00 3.18
3075 4219 1.664151 GCGAGGGGATTAAACGAACAG 59.336 52.381 0.00 0.00 0.00 3.16
3076 4220 2.277084 CGAGGGGATTAAACGAACAGG 58.723 52.381 0.00 0.00 0.00 4.00
3077 4221 2.640184 GAGGGGATTAAACGAACAGGG 58.360 52.381 0.00 0.00 0.00 4.45
3078 4222 1.100510 GGGGATTAAACGAACAGGGC 58.899 55.000 0.00 0.00 0.00 5.19
3079 4223 1.100510 GGGATTAAACGAACAGGGCC 58.899 55.000 0.00 0.00 0.00 5.80
3080 4224 1.340697 GGGATTAAACGAACAGGGCCT 60.341 52.381 0.00 0.00 0.00 5.19
3081 4225 2.092807 GGGATTAAACGAACAGGGCCTA 60.093 50.000 5.28 0.00 0.00 3.93
3082 4226 3.613030 GGATTAAACGAACAGGGCCTAA 58.387 45.455 5.28 0.00 0.00 2.69
3083 4227 3.626217 GGATTAAACGAACAGGGCCTAAG 59.374 47.826 5.28 0.00 0.00 2.18
3087 4231 0.613777 ACGAACAGGGCCTAAGGAAG 59.386 55.000 5.28 0.00 0.00 3.46
3090 4234 0.178843 AACAGGGCCTAAGGAAGGGA 60.179 55.000 5.28 0.00 46.65 4.20
3118 4264 2.729194 AGTGAGATGACTTCGGCTAGT 58.271 47.619 0.00 0.00 0.00 2.57
3130 4276 5.198965 ACTTCGGCTAGTCTTGTAAGGATA 58.801 41.667 0.00 0.00 0.00 2.59
3211 4547 6.877668 TTTGGACCTTACTGTATATGTGGA 57.122 37.500 0.00 0.00 0.00 4.02
3216 4552 4.583489 ACCTTACTGTATATGTGGAGGACG 59.417 45.833 6.49 0.00 0.00 4.79
3274 4610 5.650703 CAGAAATAACGTACCTCCCCATTTT 59.349 40.000 0.00 0.00 0.00 1.82
3286 4622 6.322931 ACCTCCCCATTTTATCAAAGAAACT 58.677 36.000 0.00 0.00 0.00 2.66
3328 4664 3.760035 GAGCCTCCGTCTGCCGAA 61.760 66.667 0.00 0.00 39.56 4.30
3329 4665 3.991536 GAGCCTCCGTCTGCCGAAC 62.992 68.421 0.00 0.00 39.56 3.95
3342 4678 4.675029 CGAACGCCCGAACCCACT 62.675 66.667 0.00 0.00 0.00 4.00
3343 4679 2.281276 GAACGCCCGAACCCACTT 60.281 61.111 0.00 0.00 0.00 3.16
3344 4680 1.895231 GAACGCCCGAACCCACTTT 60.895 57.895 0.00 0.00 0.00 2.66
3345 4681 1.848932 GAACGCCCGAACCCACTTTC 61.849 60.000 0.00 0.00 0.00 2.62
3346 4682 3.053896 CGCCCGAACCCACTTTCC 61.054 66.667 0.00 0.00 0.00 3.13
3347 4683 3.053896 GCCCGAACCCACTTTCCG 61.054 66.667 0.00 0.00 0.00 4.30
3348 4684 2.428622 CCCGAACCCACTTTCCGT 59.571 61.111 0.00 0.00 0.00 4.69
3349 4685 1.964373 CCCGAACCCACTTTCCGTG 60.964 63.158 0.00 0.00 43.41 4.94
3350 4686 1.070105 CCGAACCCACTTTCCGTGA 59.930 57.895 0.00 0.00 46.81 4.35
3351 4687 0.949105 CCGAACCCACTTTCCGTGAG 60.949 60.000 0.00 0.00 46.81 3.51
3366 4702 2.815478 CGTGAGGCTCTCCTATTTCAC 58.185 52.381 16.72 1.86 44.46 3.18
3367 4703 2.428890 CGTGAGGCTCTCCTATTTCACT 59.571 50.000 16.72 0.00 44.46 3.41
3368 4704 3.490078 CGTGAGGCTCTCCTATTTCACTC 60.490 52.174 16.72 0.00 44.46 3.51
3369 4705 2.690497 TGAGGCTCTCCTATTTCACTCG 59.310 50.000 16.72 0.00 44.46 4.18
3370 4706 2.035321 GAGGCTCTCCTATTTCACTCGG 59.965 54.545 7.40 0.00 44.46 4.63
3371 4707 2.032620 GGCTCTCCTATTTCACTCGGA 58.967 52.381 0.00 0.00 0.00 4.55
3372 4708 2.630580 GGCTCTCCTATTTCACTCGGAT 59.369 50.000 0.00 0.00 0.00 4.18
3373 4709 3.305744 GGCTCTCCTATTTCACTCGGATC 60.306 52.174 0.00 0.00 0.00 3.36
3374 4710 3.610585 GCTCTCCTATTTCACTCGGATCG 60.611 52.174 0.00 0.00 0.00 3.69
3375 4711 3.552875 TCTCCTATTTCACTCGGATCGT 58.447 45.455 0.00 0.00 0.00 3.73
3376 4712 4.711399 TCTCCTATTTCACTCGGATCGTA 58.289 43.478 0.00 0.00 0.00 3.43
3377 4713 4.755629 TCTCCTATTTCACTCGGATCGTAG 59.244 45.833 0.00 0.00 0.00 3.51
3378 4714 3.819337 TCCTATTTCACTCGGATCGTAGG 59.181 47.826 0.00 0.00 0.00 3.18
3379 4715 3.568853 CCTATTTCACTCGGATCGTAGGT 59.431 47.826 0.00 0.00 0.00 3.08
3380 4716 2.933495 TTTCACTCGGATCGTAGGTG 57.067 50.000 0.00 0.00 0.00 4.00
3381 4717 2.118313 TTCACTCGGATCGTAGGTGA 57.882 50.000 5.68 5.68 33.65 4.02
3382 4718 2.343484 TCACTCGGATCGTAGGTGAT 57.657 50.000 5.68 0.00 32.04 3.06
3383 4719 2.651455 TCACTCGGATCGTAGGTGATT 58.349 47.619 5.68 0.00 32.04 2.57
3384 4720 3.021695 TCACTCGGATCGTAGGTGATTT 58.978 45.455 5.68 0.00 32.04 2.17
3385 4721 3.446161 TCACTCGGATCGTAGGTGATTTT 59.554 43.478 5.68 0.00 32.04 1.82
3386 4722 4.081862 TCACTCGGATCGTAGGTGATTTTT 60.082 41.667 5.68 0.00 32.04 1.94
3387 4723 4.032900 CACTCGGATCGTAGGTGATTTTTG 59.967 45.833 0.00 0.00 0.00 2.44
3388 4724 3.527533 TCGGATCGTAGGTGATTTTTGG 58.472 45.455 0.00 0.00 0.00 3.28
3389 4725 2.031683 CGGATCGTAGGTGATTTTTGGC 59.968 50.000 0.00 0.00 0.00 4.52
3390 4726 3.279434 GGATCGTAGGTGATTTTTGGCT 58.721 45.455 0.00 0.00 0.00 4.75
3391 4727 3.694566 GGATCGTAGGTGATTTTTGGCTT 59.305 43.478 0.00 0.00 0.00 4.35
3392 4728 4.157840 GGATCGTAGGTGATTTTTGGCTTT 59.842 41.667 0.00 0.00 0.00 3.51
3393 4729 5.355910 GGATCGTAGGTGATTTTTGGCTTTA 59.644 40.000 0.00 0.00 0.00 1.85
3394 4730 5.616488 TCGTAGGTGATTTTTGGCTTTAC 57.384 39.130 0.00 0.00 0.00 2.01
3395 4731 4.152759 TCGTAGGTGATTTTTGGCTTTACG 59.847 41.667 0.00 0.00 34.40 3.18
3396 4732 3.297830 AGGTGATTTTTGGCTTTACGC 57.702 42.857 0.00 0.00 38.13 4.42
3397 4733 1.982913 GGTGATTTTTGGCTTTACGCG 59.017 47.619 3.53 3.53 40.44 6.01
3398 4734 2.606065 GGTGATTTTTGGCTTTACGCGT 60.606 45.455 19.17 19.17 40.44 6.01
3399 4735 2.403698 GTGATTTTTGGCTTTACGCGTG 59.596 45.455 24.59 6.31 40.44 5.34
3400 4736 2.033550 TGATTTTTGGCTTTACGCGTGT 59.966 40.909 24.59 6.91 40.44 4.49
3401 4737 2.108178 TTTTTGGCTTTACGCGTGTC 57.892 45.000 24.59 7.48 40.44 3.67
3402 4738 0.308376 TTTTGGCTTTACGCGTGTCC 59.692 50.000 24.59 16.91 40.44 4.02
3403 4739 1.833434 TTTGGCTTTACGCGTGTCCG 61.833 55.000 24.59 8.64 40.44 4.79
3404 4740 3.484547 GGCTTTACGCGTGTCCGG 61.485 66.667 24.59 8.50 40.44 5.14
3405 4741 2.431260 GCTTTACGCGTGTCCGGA 60.431 61.111 24.59 0.00 33.68 5.14
3406 4742 2.723719 GCTTTACGCGTGTCCGGAC 61.724 63.158 28.17 28.17 33.68 4.79
3407 4743 2.049248 TTTACGCGTGTCCGGACC 60.049 61.111 31.19 20.60 33.68 4.46
3408 4744 2.752322 CTTTACGCGTGTCCGGACCA 62.752 60.000 31.19 16.65 33.68 4.02
3409 4745 3.556543 TTACGCGTGTCCGGACCAC 62.557 63.158 31.19 25.01 33.68 4.16
3413 4749 4.293648 CGTGTCCGGACCACTGCA 62.294 66.667 31.19 9.27 0.00 4.41
3414 4750 2.110213 GTGTCCGGACCACTGCAA 59.890 61.111 31.19 8.39 0.00 4.08
3415 4751 1.302511 GTGTCCGGACCACTGCAAT 60.303 57.895 31.19 0.00 0.00 3.56
3416 4752 1.302431 TGTCCGGACCACTGCAATG 60.302 57.895 31.19 0.00 0.00 2.82
3417 4753 2.359850 TCCGGACCACTGCAATGC 60.360 61.111 0.00 0.00 0.00 3.56
3418 4754 3.443045 CCGGACCACTGCAATGCC 61.443 66.667 1.53 0.00 0.00 4.40
3419 4755 2.360350 CGGACCACTGCAATGCCT 60.360 61.111 1.53 0.00 0.00 4.75
3420 4756 2.693762 CGGACCACTGCAATGCCTG 61.694 63.158 1.53 0.00 0.00 4.85
3432 4768 3.221964 CAATGCCTGCTTTTGACTACC 57.778 47.619 0.00 0.00 0.00 3.18
3433 4769 2.557924 CAATGCCTGCTTTTGACTACCA 59.442 45.455 0.00 0.00 0.00 3.25
3434 4770 2.584835 TGCCTGCTTTTGACTACCAT 57.415 45.000 0.00 0.00 0.00 3.55
3435 4771 2.161855 TGCCTGCTTTTGACTACCATG 58.838 47.619 0.00 0.00 0.00 3.66
3436 4772 1.474077 GCCTGCTTTTGACTACCATGG 59.526 52.381 11.19 11.19 0.00 3.66
3437 4773 1.474077 CCTGCTTTTGACTACCATGGC 59.526 52.381 13.04 0.00 0.00 4.40
3438 4774 1.474077 CTGCTTTTGACTACCATGGCC 59.526 52.381 13.04 0.00 0.00 5.36
3439 4775 0.817654 GCTTTTGACTACCATGGCCC 59.182 55.000 13.04 0.00 0.00 5.80
3440 4776 1.890573 GCTTTTGACTACCATGGCCCA 60.891 52.381 13.04 1.46 0.00 5.36
3441 4777 1.818674 CTTTTGACTACCATGGCCCAC 59.181 52.381 13.04 1.98 0.00 4.61
3442 4778 0.039035 TTTGACTACCATGGCCCACC 59.961 55.000 13.04 0.00 0.00 4.61
3443 4779 1.858739 TTGACTACCATGGCCCACCC 61.859 60.000 13.04 0.00 33.59 4.61
3451 4787 4.548513 TGGCCCACCCACAAACCC 62.549 66.667 0.00 0.00 39.18 4.11
3453 4789 4.233558 GCCCACCCACAAACCCCT 62.234 66.667 0.00 0.00 0.00 4.79
3454 4790 2.117423 CCCACCCACAAACCCCTC 59.883 66.667 0.00 0.00 0.00 4.30
3455 4791 2.117423 CCACCCACAAACCCCTCC 59.883 66.667 0.00 0.00 0.00 4.30
3456 4792 2.117423 CACCCACAAACCCCTCCC 59.883 66.667 0.00 0.00 0.00 4.30
3457 4793 2.037677 ACCCACAAACCCCTCCCT 60.038 61.111 0.00 0.00 0.00 4.20
3458 4794 2.160853 ACCCACAAACCCCTCCCTC 61.161 63.158 0.00 0.00 0.00 4.30
3459 4795 2.351276 CCACAAACCCCTCCCTCG 59.649 66.667 0.00 0.00 0.00 4.63
3460 4796 2.526046 CCACAAACCCCTCCCTCGT 61.526 63.158 0.00 0.00 0.00 4.18
3461 4797 1.454539 CACAAACCCCTCCCTCGTT 59.545 57.895 0.00 0.00 0.00 3.85
3462 4798 0.605589 CACAAACCCCTCCCTCGTTC 60.606 60.000 0.00 0.00 0.00 3.95
3463 4799 1.375523 CAAACCCCTCCCTCGTTCG 60.376 63.158 0.00 0.00 0.00 3.95
3464 4800 3.249837 AAACCCCTCCCTCGTTCGC 62.250 63.158 0.00 0.00 0.00 4.70
3467 4803 4.796231 CCCTCCCTCGTTCGCGTG 62.796 72.222 5.77 0.00 42.11 5.34
3472 4808 4.117372 CCTCGTTCGCGTGCGTTC 62.117 66.667 14.47 7.61 42.11 3.95
3473 4809 4.117372 CTCGTTCGCGTGCGTTCC 62.117 66.667 14.47 2.67 42.11 3.62
3474 4810 4.634133 TCGTTCGCGTGCGTTCCT 62.634 61.111 14.47 0.00 42.11 3.36
3475 4811 4.409588 CGTTCGCGTGCGTTCCTG 62.410 66.667 14.47 0.00 40.74 3.86
3476 4812 4.719616 GTTCGCGTGCGTTCCTGC 62.720 66.667 14.47 0.00 40.74 4.85
3481 4817 2.664851 CGTGCGTTCCTGCCTGAA 60.665 61.111 0.00 0.00 0.00 3.02
3482 4818 2.671177 CGTGCGTTCCTGCCTGAAG 61.671 63.158 0.00 0.00 0.00 3.02
3483 4819 2.669569 TGCGTTCCTGCCTGAAGC 60.670 61.111 0.00 0.00 44.14 3.86
3492 4828 2.946762 GCCTGAAGCGGACAACAC 59.053 61.111 0.00 0.00 0.00 3.32
3493 4829 2.617274 GCCTGAAGCGGACAACACC 61.617 63.158 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 6.964086 AGGAGGGACTAAACTTATCTGGTTTA 59.036 38.462 0.00 0.00 41.55 2.01
45 46 0.179000 GACTCCATGTCGGCAGGAAT 59.821 55.000 1.80 0.00 35.81 3.01
71 73 4.399004 TGCAAGCACCTAAAACATTTGT 57.601 36.364 0.00 0.00 0.00 2.83
103 105 8.201464 TGTAGAGCTTGTCGGATGATATTTTTA 58.799 33.333 0.00 0.00 0.00 1.52
120 122 3.969287 TGCTTCTCATGTGTAGAGCTT 57.031 42.857 15.73 0.00 33.15 3.74
138 140 4.907582 GCACTTTTGAGCATTGATTTTTGC 59.092 37.500 0.00 0.00 39.17 3.68
140 142 5.176223 CGAGCACTTTTGAGCATTGATTTTT 59.824 36.000 0.00 0.00 38.51 1.94
141 143 4.682860 CGAGCACTTTTGAGCATTGATTTT 59.317 37.500 0.00 0.00 38.51 1.82
145 147 2.493035 TCGAGCACTTTTGAGCATTGA 58.507 42.857 0.00 0.00 38.51 2.57
164 166 9.122613 GAAAAAGATTTCACTGCTCAAAGTATC 57.877 33.333 0.00 0.00 43.62 2.24
219 224 1.997606 GTGCTTGCAAGATTTGATGCC 59.002 47.619 30.39 9.17 41.87 4.40
224 229 3.921119 TGTAGGTGCTTGCAAGATTTG 57.079 42.857 30.39 4.27 0.00 2.32
306 314 5.104259 GGTGTCTCTAAACCCTCATGAAT 57.896 43.478 0.00 0.00 0.00 2.57
322 330 2.997897 GTCTGCTCCCGGGTGTCT 60.998 66.667 22.86 0.00 0.00 3.41
350 358 0.172803 CGATACGCCAGGTATAGCCC 59.827 60.000 0.00 0.00 41.91 5.19
363 371 0.732880 CGAGCTAATGGGCCGATACG 60.733 60.000 0.00 0.00 0.00 3.06
366 374 2.031163 GCGAGCTAATGGGCCGAT 59.969 61.111 0.00 0.00 0.00 4.18
384 392 0.108585 GCCCATGATGTGTCGGGTAT 59.891 55.000 0.00 0.00 41.11 2.73
410 418 4.138290 ACGACCCATTTAACAATGTGTCA 58.862 39.130 10.04 0.00 44.03 3.58
418 426 2.674747 GCGAGGTACGACCCATTTAACA 60.675 50.000 0.00 0.00 45.77 2.41
425 433 3.740397 CGTGCGAGGTACGACCCA 61.740 66.667 0.00 0.00 43.77 4.51
450 458 2.046507 CCCTGACACAGCCTCAGC 60.047 66.667 0.00 0.00 34.84 4.26
458 466 1.152631 TCCTCGTGACCCTGACACA 60.153 57.895 0.00 0.00 38.04 3.72
568 590 1.904771 TCCCTTATGGAGCACACGG 59.095 57.895 0.00 0.00 38.61 4.94
610 634 2.292267 CAGGCCCAGCACATTAGTTAG 58.708 52.381 0.00 0.00 0.00 2.34
1196 2181 0.466555 CTAGTCGACCTAGGCCAGCT 60.467 60.000 13.01 5.24 39.69 4.24
1291 2285 7.074653 ACTAGAACTTCCATCACCTAAAACA 57.925 36.000 0.00 0.00 0.00 2.83
1385 2386 5.047566 TCAGATCTGTTCCAAAAGACCAA 57.952 39.130 21.92 0.00 0.00 3.67
1386 2387 4.705110 TCAGATCTGTTCCAAAAGACCA 57.295 40.909 21.92 0.00 0.00 4.02
1387 2388 5.066593 AGTTCAGATCTGTTCCAAAAGACC 58.933 41.667 21.92 0.00 0.00 3.85
1388 2389 6.625873 AAGTTCAGATCTGTTCCAAAAGAC 57.374 37.500 21.92 8.22 0.00 3.01
1389 2390 7.509546 AGTAAGTTCAGATCTGTTCCAAAAGA 58.490 34.615 21.92 0.00 0.00 2.52
1390 2391 7.095017 GGAGTAAGTTCAGATCTGTTCCAAAAG 60.095 40.741 21.92 0.00 0.00 2.27
1391 2392 6.710744 GGAGTAAGTTCAGATCTGTTCCAAAA 59.289 38.462 21.92 5.43 0.00 2.44
1392 2393 6.183361 TGGAGTAAGTTCAGATCTGTTCCAAA 60.183 38.462 21.92 6.17 0.00 3.28
1393 2394 5.306937 TGGAGTAAGTTCAGATCTGTTCCAA 59.693 40.000 21.92 6.55 0.00 3.53
1394 2395 4.838423 TGGAGTAAGTTCAGATCTGTTCCA 59.162 41.667 21.92 18.37 0.00 3.53
1395 2396 5.046950 ACTGGAGTAAGTTCAGATCTGTTCC 60.047 44.000 21.92 16.49 33.19 3.62
1396 2397 6.031751 ACTGGAGTAAGTTCAGATCTGTTC 57.968 41.667 21.92 15.31 33.19 3.18
1397 2398 5.540337 TGACTGGAGTAAGTTCAGATCTGTT 59.460 40.000 21.92 11.86 33.19 3.16
1398 2399 5.080337 TGACTGGAGTAAGTTCAGATCTGT 58.920 41.667 21.92 5.72 33.19 3.41
1399 2400 5.651387 TGACTGGAGTAAGTTCAGATCTG 57.349 43.478 17.07 17.07 33.19 2.90
1400 2401 5.954752 TCATGACTGGAGTAAGTTCAGATCT 59.045 40.000 0.00 0.00 33.19 2.75
1401 2402 6.214191 TCATGACTGGAGTAAGTTCAGATC 57.786 41.667 0.00 0.00 33.19 2.75
1402 2403 6.580788 CATCATGACTGGAGTAAGTTCAGAT 58.419 40.000 0.00 0.00 33.19 2.90
1403 2404 5.625426 GCATCATGACTGGAGTAAGTTCAGA 60.625 44.000 0.00 0.00 33.19 3.27
1404 2405 4.569966 GCATCATGACTGGAGTAAGTTCAG 59.430 45.833 0.00 0.00 34.91 3.02
1405 2406 4.507710 GCATCATGACTGGAGTAAGTTCA 58.492 43.478 0.00 0.00 0.00 3.18
1406 2407 3.873952 GGCATCATGACTGGAGTAAGTTC 59.126 47.826 0.00 0.00 0.00 3.01
1407 2408 3.264193 TGGCATCATGACTGGAGTAAGTT 59.736 43.478 0.00 0.00 0.00 2.66
1408 2409 2.840038 TGGCATCATGACTGGAGTAAGT 59.160 45.455 0.00 0.00 0.00 2.24
1409 2410 3.201290 GTGGCATCATGACTGGAGTAAG 58.799 50.000 0.00 0.00 0.00 2.34
1410 2411 2.418609 CGTGGCATCATGACTGGAGTAA 60.419 50.000 0.00 0.00 31.73 2.24
1411 2412 1.136891 CGTGGCATCATGACTGGAGTA 59.863 52.381 0.00 0.00 31.73 2.59
1412 2413 0.107993 CGTGGCATCATGACTGGAGT 60.108 55.000 0.00 0.00 31.73 3.85
1413 2414 0.176449 TCGTGGCATCATGACTGGAG 59.824 55.000 0.00 0.00 34.27 3.86
1414 2415 0.612744 TTCGTGGCATCATGACTGGA 59.387 50.000 0.00 0.00 38.52 3.86
1415 2416 0.729116 GTTCGTGGCATCATGACTGG 59.271 55.000 0.00 0.00 38.52 4.00
1416 2417 1.129251 GTGTTCGTGGCATCATGACTG 59.871 52.381 0.00 0.00 38.52 3.51
1417 2418 1.270785 TGTGTTCGTGGCATCATGACT 60.271 47.619 0.00 0.00 38.52 3.41
1418 2419 1.155889 TGTGTTCGTGGCATCATGAC 58.844 50.000 0.00 0.00 38.52 3.06
1419 2420 1.738908 CATGTGTTCGTGGCATCATGA 59.261 47.619 0.00 0.00 37.15 3.07
1420 2421 1.469703 ACATGTGTTCGTGGCATCATG 59.530 47.619 0.00 0.00 38.65 3.07
1421 2422 1.825090 ACATGTGTTCGTGGCATCAT 58.175 45.000 0.00 0.00 35.12 2.45
1422 2423 1.603456 AACATGTGTTCGTGGCATCA 58.397 45.000 0.00 0.00 35.12 3.07
1423 2424 2.704725 AAACATGTGTTCGTGGCATC 57.295 45.000 0.00 0.00 37.25 3.91
1424 2425 3.451141 AAAAACATGTGTTCGTGGCAT 57.549 38.095 0.63 0.00 37.25 4.40
1425 2426 2.949451 AAAAACATGTGTTCGTGGCA 57.051 40.000 0.63 0.00 37.25 4.92
1426 2427 5.704217 TTTTAAAAACATGTGTTCGTGGC 57.296 34.783 0.63 0.00 37.25 5.01
1427 2428 8.263269 GTGTATTTTAAAAACATGTGTTCGTGG 58.737 33.333 0.63 0.00 37.25 4.94
1428 2429 7.988313 CGTGTATTTTAAAAACATGTGTTCGTG 59.012 33.333 0.63 0.00 37.25 4.35
1429 2430 7.909121 TCGTGTATTTTAAAAACATGTGTTCGT 59.091 29.630 21.53 0.00 37.25 3.85
1430 2431 8.196241 GTCGTGTATTTTAAAAACATGTGTTCG 58.804 33.333 21.53 16.36 37.25 3.95
1443 2444 6.982141 AGATAATGCCTCGTCGTGTATTTTAA 59.018 34.615 6.28 0.00 0.00 1.52
1540 2635 4.871557 TGCATGGTCCAAATTACTACGTAC 59.128 41.667 0.00 0.00 0.00 3.67
1541 2636 5.087391 TGCATGGTCCAAATTACTACGTA 57.913 39.130 0.00 0.00 0.00 3.57
1542 2637 3.945346 TGCATGGTCCAAATTACTACGT 58.055 40.909 0.00 0.00 0.00 3.57
1543 2638 4.955925 TTGCATGGTCCAAATTACTACG 57.044 40.909 0.00 0.00 0.00 3.51
2441 3582 1.904032 CTTCCAGGTGGCTCTCCTC 59.096 63.158 0.00 0.00 32.37 3.71
2503 3644 4.811024 ACGAATACTATCAAGGTGTGCATG 59.189 41.667 0.00 0.00 0.00 4.06
2524 3665 4.549458 AGCAAAATCTGATGGTTCAAACG 58.451 39.130 0.00 0.00 0.00 3.60
2531 3673 5.079643 ACAAAGGTAGCAAAATCTGATGGT 58.920 37.500 0.00 0.00 0.00 3.55
2560 3702 2.919971 GCACGAGCTTCAAGGAGTT 58.080 52.632 0.00 0.00 37.91 3.01
2600 3743 9.956720 GCAAATAGCAAATAGTTCAACAGATAT 57.043 29.630 0.00 0.00 44.79 1.63
2644 3787 8.223769 CACAGCATACGATTACTAATTCAATCC 58.776 37.037 0.00 0.00 0.00 3.01
2647 3790 7.465379 GCACACAGCATACGATTACTAATTCAA 60.465 37.037 0.00 0.00 44.79 2.69
2650 3793 6.287107 GCACACAGCATACGATTACTAATT 57.713 37.500 0.00 0.00 44.79 1.40
2651 3794 5.907197 GCACACAGCATACGATTACTAAT 57.093 39.130 0.00 0.00 44.79 1.73
2761 3904 4.716784 AGTAAGCAGTATCACCCAGATGAA 59.283 41.667 0.00 0.00 37.57 2.57
2776 3919 8.603242 TTTAAGAGAAAACCAGTAGTAAGCAG 57.397 34.615 0.00 0.00 0.00 4.24
2782 3925 7.778382 ACCAACATTTAAGAGAAAACCAGTAGT 59.222 33.333 0.00 0.00 0.00 2.73
2794 3937 7.951530 AAAATTGCAGACCAACATTTAAGAG 57.048 32.000 0.00 0.00 35.99 2.85
2845 3988 6.017400 ACAACTTTCATATTTGAGCCACAG 57.983 37.500 0.00 0.00 32.27 3.66
2913 4057 1.137086 ACACGAGCATATCCACTGTCC 59.863 52.381 0.00 0.00 0.00 4.02
2919 4063 0.464036 GGTGGACACGAGCATATCCA 59.536 55.000 0.00 0.00 38.94 3.41
2924 4068 0.537188 CCTTAGGTGGACACGAGCAT 59.463 55.000 0.00 0.00 0.00 3.79
2944 4088 0.676782 CCCTGCCTAACCGAACAAGG 60.677 60.000 0.00 0.00 37.30 3.61
2945 4089 0.036306 ACCCTGCCTAACCGAACAAG 59.964 55.000 0.00 0.00 0.00 3.16
2946 4090 0.475044 AACCCTGCCTAACCGAACAA 59.525 50.000 0.00 0.00 0.00 2.83
2947 4091 0.475044 AAACCCTGCCTAACCGAACA 59.525 50.000 0.00 0.00 0.00 3.18
2948 4092 0.879090 CAAACCCTGCCTAACCGAAC 59.121 55.000 0.00 0.00 0.00 3.95
2949 4093 0.250989 CCAAACCCTGCCTAACCGAA 60.251 55.000 0.00 0.00 0.00 4.30
2950 4094 1.128809 TCCAAACCCTGCCTAACCGA 61.129 55.000 0.00 0.00 0.00 4.69
2951 4095 0.676782 CTCCAAACCCTGCCTAACCG 60.677 60.000 0.00 0.00 0.00 4.44
2952 4096 0.404426 ACTCCAAACCCTGCCTAACC 59.596 55.000 0.00 0.00 0.00 2.85
2953 4097 1.534729 CACTCCAAACCCTGCCTAAC 58.465 55.000 0.00 0.00 0.00 2.34
2954 4098 0.404040 CCACTCCAAACCCTGCCTAA 59.596 55.000 0.00 0.00 0.00 2.69
2955 4099 0.770557 ACCACTCCAAACCCTGCCTA 60.771 55.000 0.00 0.00 0.00 3.93
2956 4100 1.655114 AACCACTCCAAACCCTGCCT 61.655 55.000 0.00 0.00 0.00 4.75
2957 4101 0.759060 AAACCACTCCAAACCCTGCC 60.759 55.000 0.00 0.00 0.00 4.85
2958 4102 0.389025 CAAACCACTCCAAACCCTGC 59.611 55.000 0.00 0.00 0.00 4.85
2959 4103 2.065899 TCAAACCACTCCAAACCCTG 57.934 50.000 0.00 0.00 0.00 4.45
2960 4104 2.838637 TTCAAACCACTCCAAACCCT 57.161 45.000 0.00 0.00 0.00 4.34
2961 4105 2.102420 CCTTTCAAACCACTCCAAACCC 59.898 50.000 0.00 0.00 0.00 4.11
2962 4106 2.102420 CCCTTTCAAACCACTCCAAACC 59.898 50.000 0.00 0.00 0.00 3.27
2963 4107 3.028130 TCCCTTTCAAACCACTCCAAAC 58.972 45.455 0.00 0.00 0.00 2.93
2964 4108 3.390175 TCCCTTTCAAACCACTCCAAA 57.610 42.857 0.00 0.00 0.00 3.28
2965 4109 3.611025 ATCCCTTTCAAACCACTCCAA 57.389 42.857 0.00 0.00 0.00 3.53
2966 4110 3.230134 CAATCCCTTTCAAACCACTCCA 58.770 45.455 0.00 0.00 0.00 3.86
2967 4111 2.562738 CCAATCCCTTTCAAACCACTCC 59.437 50.000 0.00 0.00 0.00 3.85
2968 4112 3.496331 TCCAATCCCTTTCAAACCACTC 58.504 45.455 0.00 0.00 0.00 3.51
2969 4113 3.500343 CTCCAATCCCTTTCAAACCACT 58.500 45.455 0.00 0.00 0.00 4.00
2970 4114 2.562738 CCTCCAATCCCTTTCAAACCAC 59.437 50.000 0.00 0.00 0.00 4.16
2971 4115 2.492567 CCCTCCAATCCCTTTCAAACCA 60.493 50.000 0.00 0.00 0.00 3.67
2972 4116 2.179427 CCCTCCAATCCCTTTCAAACC 58.821 52.381 0.00 0.00 0.00 3.27
2973 4117 2.179427 CCCCTCCAATCCCTTTCAAAC 58.821 52.381 0.00 0.00 0.00 2.93
2974 4118 2.077803 TCCCCTCCAATCCCTTTCAAA 58.922 47.619 0.00 0.00 0.00 2.69
2975 4119 1.766951 TCCCCTCCAATCCCTTTCAA 58.233 50.000 0.00 0.00 0.00 2.69
2976 4120 2.000290 ATCCCCTCCAATCCCTTTCA 58.000 50.000 0.00 0.00 0.00 2.69
2977 4121 4.536295 TTAATCCCCTCCAATCCCTTTC 57.464 45.455 0.00 0.00 0.00 2.62
2978 4122 4.984642 TTTAATCCCCTCCAATCCCTTT 57.015 40.909 0.00 0.00 0.00 3.11
2979 4123 4.140686 GGATTTAATCCCCTCCAATCCCTT 60.141 45.833 12.74 0.00 43.88 3.95
2980 4124 3.402708 GGATTTAATCCCCTCCAATCCCT 59.597 47.826 12.74 0.00 43.88 4.20
2981 4125 3.779444 GGATTTAATCCCCTCCAATCCC 58.221 50.000 12.74 0.00 43.88 3.85
2992 4136 6.036577 TTTGACTTGCAAGGGATTTAATCC 57.963 37.500 29.18 15.22 39.39 3.01
2993 4137 7.278646 GGATTTTGACTTGCAAGGGATTTAATC 59.721 37.037 29.18 23.91 37.87 1.75
2994 4138 7.038088 AGGATTTTGACTTGCAAGGGATTTAAT 60.038 33.333 29.18 18.73 37.87 1.40
2995 4139 6.269769 AGGATTTTGACTTGCAAGGGATTTAA 59.730 34.615 29.18 15.31 37.87 1.52
2996 4140 5.779771 AGGATTTTGACTTGCAAGGGATTTA 59.220 36.000 29.18 11.01 37.87 1.40
2997 4141 4.594491 AGGATTTTGACTTGCAAGGGATTT 59.406 37.500 29.18 8.87 37.87 2.17
2998 4142 4.162651 AGGATTTTGACTTGCAAGGGATT 58.837 39.130 29.18 9.27 37.87 3.01
2999 4143 3.782992 AGGATTTTGACTTGCAAGGGAT 58.217 40.909 29.18 14.92 37.87 3.85
3000 4144 3.243359 AGGATTTTGACTTGCAAGGGA 57.757 42.857 29.18 13.09 37.87 4.20
3001 4145 3.070015 ACAAGGATTTTGACTTGCAAGGG 59.930 43.478 29.18 7.81 46.03 3.95
3002 4146 4.202141 TGACAAGGATTTTGACTTGCAAGG 60.202 41.667 29.18 12.28 46.03 3.61
3003 4147 4.935702 TGACAAGGATTTTGACTTGCAAG 58.064 39.130 24.84 24.84 46.03 4.01
3004 4148 4.998671 TGACAAGGATTTTGACTTGCAA 57.001 36.364 0.00 0.00 46.03 4.08
3005 4149 4.998671 TTGACAAGGATTTTGACTTGCA 57.001 36.364 4.48 0.00 46.03 4.08
3006 4150 4.507756 GGTTTGACAAGGATTTTGACTTGC 59.492 41.667 4.48 0.00 46.03 4.01
3008 4152 5.893824 AGAGGTTTGACAAGGATTTTGACTT 59.106 36.000 0.00 0.00 0.00 3.01
3009 4153 5.449553 AGAGGTTTGACAAGGATTTTGACT 58.550 37.500 0.00 0.00 0.00 3.41
3010 4154 5.278512 GGAGAGGTTTGACAAGGATTTTGAC 60.279 44.000 0.00 0.00 0.00 3.18
3011 4155 4.827284 GGAGAGGTTTGACAAGGATTTTGA 59.173 41.667 0.00 0.00 0.00 2.69
3012 4156 4.584325 TGGAGAGGTTTGACAAGGATTTTG 59.416 41.667 0.00 0.00 0.00 2.44
3013 4157 4.803452 TGGAGAGGTTTGACAAGGATTTT 58.197 39.130 0.00 0.00 0.00 1.82
3014 4158 4.453480 TGGAGAGGTTTGACAAGGATTT 57.547 40.909 0.00 0.00 0.00 2.17
3015 4159 4.453480 TTGGAGAGGTTTGACAAGGATT 57.547 40.909 0.00 0.00 0.00 3.01
3016 4160 4.568592 GGATTGGAGAGGTTTGACAAGGAT 60.569 45.833 0.00 0.00 0.00 3.24
3017 4161 3.244911 GGATTGGAGAGGTTTGACAAGGA 60.245 47.826 0.00 0.00 0.00 3.36
3018 4162 3.084786 GGATTGGAGAGGTTTGACAAGG 58.915 50.000 0.00 0.00 0.00 3.61
3019 4163 3.084786 GGGATTGGAGAGGTTTGACAAG 58.915 50.000 0.00 0.00 0.00 3.16
3020 4164 2.225017 GGGGATTGGAGAGGTTTGACAA 60.225 50.000 0.00 0.00 0.00 3.18
3021 4165 1.354368 GGGGATTGGAGAGGTTTGACA 59.646 52.381 0.00 0.00 0.00 3.58
3022 4166 1.636003 AGGGGATTGGAGAGGTTTGAC 59.364 52.381 0.00 0.00 0.00 3.18
3023 4167 1.916181 GAGGGGATTGGAGAGGTTTGA 59.084 52.381 0.00 0.00 0.00 2.69
3024 4168 1.064389 GGAGGGGATTGGAGAGGTTTG 60.064 57.143 0.00 0.00 0.00 2.93
3025 4169 1.299939 GGAGGGGATTGGAGAGGTTT 58.700 55.000 0.00 0.00 0.00 3.27
3026 4170 0.121197 TGGAGGGGATTGGAGAGGTT 59.879 55.000 0.00 0.00 0.00 3.50
3027 4171 0.121197 TTGGAGGGGATTGGAGAGGT 59.879 55.000 0.00 0.00 0.00 3.85
3028 4172 1.423161 GATTGGAGGGGATTGGAGAGG 59.577 57.143 0.00 0.00 0.00 3.69
3029 4173 1.423161 GGATTGGAGGGGATTGGAGAG 59.577 57.143 0.00 0.00 0.00 3.20
3030 4174 1.522900 GGATTGGAGGGGATTGGAGA 58.477 55.000 0.00 0.00 0.00 3.71
3031 4175 0.480252 GGGATTGGAGGGGATTGGAG 59.520 60.000 0.00 0.00 0.00 3.86
3032 4176 0.047802 AGGGATTGGAGGGGATTGGA 59.952 55.000 0.00 0.00 0.00 3.53
3033 4177 0.186873 CAGGGATTGGAGGGGATTGG 59.813 60.000 0.00 0.00 0.00 3.16
3034 4178 0.929244 ACAGGGATTGGAGGGGATTG 59.071 55.000 0.00 0.00 0.00 2.67
3035 4179 0.929244 CACAGGGATTGGAGGGGATT 59.071 55.000 0.00 0.00 0.00 3.01
3036 4180 0.995675 CCACAGGGATTGGAGGGGAT 60.996 60.000 0.00 0.00 36.02 3.85
3037 4181 1.619363 CCACAGGGATTGGAGGGGA 60.619 63.158 0.00 0.00 36.02 4.81
3038 4182 3.010144 CCACAGGGATTGGAGGGG 58.990 66.667 0.00 0.00 36.02 4.79
3039 4183 2.276740 GCCACAGGGATTGGAGGG 59.723 66.667 0.00 0.00 36.02 4.30
3040 4184 2.124570 CGCCACAGGGATTGGAGG 60.125 66.667 0.00 0.00 36.02 4.30
3041 4185 1.153289 CTCGCCACAGGGATTGGAG 60.153 63.158 0.00 0.00 36.02 3.86
3042 4186 2.669133 CCTCGCCACAGGGATTGGA 61.669 63.158 0.00 0.00 36.02 3.53
3043 4187 2.124570 CCTCGCCACAGGGATTGG 60.125 66.667 0.00 0.00 35.59 3.16
3049 4193 0.254747 TTTAATCCCCTCGCCACAGG 59.745 55.000 0.00 0.00 0.00 4.00
3050 4194 1.379527 GTTTAATCCCCTCGCCACAG 58.620 55.000 0.00 0.00 0.00 3.66
3051 4195 0.391927 CGTTTAATCCCCTCGCCACA 60.392 55.000 0.00 0.00 0.00 4.17
3052 4196 0.108041 TCGTTTAATCCCCTCGCCAC 60.108 55.000 0.00 0.00 0.00 5.01
3053 4197 0.614294 TTCGTTTAATCCCCTCGCCA 59.386 50.000 0.00 0.00 0.00 5.69
3054 4198 1.012086 GTTCGTTTAATCCCCTCGCC 58.988 55.000 0.00 0.00 0.00 5.54
3055 4199 1.664151 CTGTTCGTTTAATCCCCTCGC 59.336 52.381 0.00 0.00 0.00 5.03
3056 4200 2.277084 CCTGTTCGTTTAATCCCCTCG 58.723 52.381 0.00 0.00 0.00 4.63
3057 4201 2.640184 CCCTGTTCGTTTAATCCCCTC 58.360 52.381 0.00 0.00 0.00 4.30
3058 4202 1.340697 GCCCTGTTCGTTTAATCCCCT 60.341 52.381 0.00 0.00 0.00 4.79
3059 4203 1.100510 GCCCTGTTCGTTTAATCCCC 58.899 55.000 0.00 0.00 0.00 4.81
3060 4204 1.100510 GGCCCTGTTCGTTTAATCCC 58.899 55.000 0.00 0.00 0.00 3.85
3061 4205 2.124277 AGGCCCTGTTCGTTTAATCC 57.876 50.000 0.00 0.00 0.00 3.01
3062 4206 3.626217 CCTTAGGCCCTGTTCGTTTAATC 59.374 47.826 0.00 0.00 0.00 1.75
3063 4207 3.264964 TCCTTAGGCCCTGTTCGTTTAAT 59.735 43.478 0.00 0.00 0.00 1.40
3064 4208 2.638855 TCCTTAGGCCCTGTTCGTTTAA 59.361 45.455 0.00 0.00 0.00 1.52
3065 4209 2.259012 TCCTTAGGCCCTGTTCGTTTA 58.741 47.619 0.00 0.00 0.00 2.01
3066 4210 1.061546 TCCTTAGGCCCTGTTCGTTT 58.938 50.000 0.00 0.00 0.00 3.60
3067 4211 1.003233 CTTCCTTAGGCCCTGTTCGTT 59.997 52.381 0.00 0.00 0.00 3.85
3068 4212 0.613777 CTTCCTTAGGCCCTGTTCGT 59.386 55.000 0.00 0.00 0.00 3.85
3069 4213 0.107654 CCTTCCTTAGGCCCTGTTCG 60.108 60.000 0.00 0.00 37.17 3.95
3070 4214 0.256177 CCCTTCCTTAGGCCCTGTTC 59.744 60.000 0.00 0.00 43.27 3.18
3071 4215 0.178843 TCCCTTCCTTAGGCCCTGTT 60.179 55.000 0.00 0.00 43.27 3.16
3072 4216 0.178843 TTCCCTTCCTTAGGCCCTGT 60.179 55.000 0.00 0.00 43.27 4.00
3073 4217 0.999712 TTTCCCTTCCTTAGGCCCTG 59.000 55.000 0.00 0.00 43.27 4.45
3074 4218 1.768265 TTTTCCCTTCCTTAGGCCCT 58.232 50.000 0.00 0.00 43.27 5.19
3075 4219 2.245028 AGATTTTCCCTTCCTTAGGCCC 59.755 50.000 0.00 0.00 43.27 5.80
3076 4220 3.671740 AGATTTTCCCTTCCTTAGGCC 57.328 47.619 0.00 0.00 43.27 5.19
3077 4221 5.590663 CACTAAGATTTTCCCTTCCTTAGGC 59.409 44.000 0.00 0.00 43.27 3.93
3078 4222 6.958767 TCACTAAGATTTTCCCTTCCTTAGG 58.041 40.000 0.00 0.00 44.33 2.69
3079 4223 7.852263 TCTCACTAAGATTTTCCCTTCCTTAG 58.148 38.462 0.00 0.00 41.02 2.18
3080 4224 7.808279 TCTCACTAAGATTTTCCCTTCCTTA 57.192 36.000 0.00 0.00 0.00 2.69
3081 4225 6.704056 TCTCACTAAGATTTTCCCTTCCTT 57.296 37.500 0.00 0.00 0.00 3.36
3082 4226 6.445139 TCATCTCACTAAGATTTTCCCTTCCT 59.555 38.462 0.00 0.00 42.30 3.36
3083 4227 6.540551 GTCATCTCACTAAGATTTTCCCTTCC 59.459 42.308 0.00 0.00 42.30 3.46
3087 4231 6.256757 CGAAGTCATCTCACTAAGATTTTCCC 59.743 42.308 0.00 0.00 42.30 3.97
3090 4234 5.582665 GCCGAAGTCATCTCACTAAGATTTT 59.417 40.000 0.00 0.00 42.30 1.82
3118 4264 6.228258 AGCGTGAAAAACTATCCTTACAAGA 58.772 36.000 0.00 0.00 0.00 3.02
3130 4276 2.017049 ACTGCAAGAGCGTGAAAAACT 58.983 42.857 0.00 0.00 46.23 2.66
3192 4528 5.278364 CGTCCTCCACATATACAGTAAGGTC 60.278 48.000 0.00 0.00 0.00 3.85
3211 4547 7.447374 TTGAAATATCATCACAAAACGTCCT 57.553 32.000 0.00 0.00 34.96 3.85
3256 4592 5.954153 TGATAAAATGGGGAGGTACGTTA 57.046 39.130 0.00 0.00 0.00 3.18
3258 4594 4.847990 TTGATAAAATGGGGAGGTACGT 57.152 40.909 0.00 0.00 0.00 3.57
3274 4610 7.795482 TTCGGAGTTTTCAGTTTCTTTGATA 57.205 32.000 0.00 0.00 0.00 2.15
3286 4622 3.067461 CCAACACCATTTCGGAGTTTTCA 59.933 43.478 0.00 0.00 45.25 2.69
3325 4661 4.675029 AGTGGGTTCGGGCGTTCG 62.675 66.667 0.00 0.00 0.00 3.95
3326 4662 1.848932 GAAAGTGGGTTCGGGCGTTC 61.849 60.000 0.00 0.00 0.00 3.95
3327 4663 1.895231 GAAAGTGGGTTCGGGCGTT 60.895 57.895 0.00 0.00 0.00 4.84
3328 4664 2.281276 GAAAGTGGGTTCGGGCGT 60.281 61.111 0.00 0.00 0.00 5.68
3329 4665 3.053896 GGAAAGTGGGTTCGGGCG 61.054 66.667 0.00 0.00 0.00 6.13
3330 4666 3.053896 CGGAAAGTGGGTTCGGGC 61.054 66.667 0.00 0.00 0.00 6.13
3331 4667 1.964373 CACGGAAAGTGGGTTCGGG 60.964 63.158 0.00 0.00 46.77 5.14
3332 4668 3.650369 CACGGAAAGTGGGTTCGG 58.350 61.111 0.00 0.00 46.77 4.30
3340 4676 0.543174 AGGAGAGCCTCACGGAAAGT 60.543 55.000 0.00 0.00 42.19 2.66
3341 4677 1.475403 TAGGAGAGCCTCACGGAAAG 58.525 55.000 0.00 0.00 45.54 2.62
3342 4678 2.160721 ATAGGAGAGCCTCACGGAAA 57.839 50.000 0.00 0.00 45.54 3.13
3343 4679 2.160721 AATAGGAGAGCCTCACGGAA 57.839 50.000 0.00 0.00 45.54 4.30
3344 4680 2.032620 GAAATAGGAGAGCCTCACGGA 58.967 52.381 0.00 0.00 45.54 4.69
3345 4681 1.757118 TGAAATAGGAGAGCCTCACGG 59.243 52.381 0.00 0.00 45.54 4.94
3346 4682 2.428890 AGTGAAATAGGAGAGCCTCACG 59.571 50.000 0.00 0.00 45.54 4.35
3347 4683 3.490078 CGAGTGAAATAGGAGAGCCTCAC 60.490 52.174 0.00 0.00 45.54 3.51
3348 4684 2.690497 CGAGTGAAATAGGAGAGCCTCA 59.310 50.000 0.00 0.00 45.54 3.86
3349 4685 2.035321 CCGAGTGAAATAGGAGAGCCTC 59.965 54.545 0.00 0.00 45.54 4.70
3351 4687 2.032620 TCCGAGTGAAATAGGAGAGCC 58.967 52.381 0.00 0.00 0.00 4.70
3352 4688 3.610585 CGATCCGAGTGAAATAGGAGAGC 60.611 52.174 0.00 0.00 36.08 4.09
3353 4689 3.566322 ACGATCCGAGTGAAATAGGAGAG 59.434 47.826 0.00 0.00 36.08 3.20
3354 4690 3.552875 ACGATCCGAGTGAAATAGGAGA 58.447 45.455 0.00 0.00 36.08 3.71
3355 4691 3.992260 ACGATCCGAGTGAAATAGGAG 57.008 47.619 0.00 0.00 36.08 3.69
3356 4692 3.819337 CCTACGATCCGAGTGAAATAGGA 59.181 47.826 0.00 0.00 37.17 2.94
3357 4693 3.568853 ACCTACGATCCGAGTGAAATAGG 59.431 47.826 0.00 0.00 34.42 2.57
3358 4694 4.275196 TCACCTACGATCCGAGTGAAATAG 59.725 45.833 0.00 0.00 34.40 1.73
3359 4695 4.201657 TCACCTACGATCCGAGTGAAATA 58.798 43.478 0.00 0.00 34.40 1.40
3360 4696 3.021695 TCACCTACGATCCGAGTGAAAT 58.978 45.455 0.00 0.00 34.40 2.17
3361 4697 2.439409 TCACCTACGATCCGAGTGAAA 58.561 47.619 0.00 0.00 34.40 2.69
3362 4698 2.118313 TCACCTACGATCCGAGTGAA 57.882 50.000 0.00 0.00 34.40 3.18
3363 4699 2.343484 ATCACCTACGATCCGAGTGA 57.657 50.000 11.44 11.44 38.40 3.41
3364 4700 3.438297 AAATCACCTACGATCCGAGTG 57.562 47.619 0.00 0.00 0.00 3.51
3365 4701 4.181578 CAAAAATCACCTACGATCCGAGT 58.818 43.478 0.00 0.00 0.00 4.18
3366 4702 3.555956 CCAAAAATCACCTACGATCCGAG 59.444 47.826 0.00 0.00 0.00 4.63
3367 4703 3.527533 CCAAAAATCACCTACGATCCGA 58.472 45.455 0.00 0.00 0.00 4.55
3368 4704 2.031683 GCCAAAAATCACCTACGATCCG 59.968 50.000 0.00 0.00 0.00 4.18
3369 4705 3.279434 AGCCAAAAATCACCTACGATCC 58.721 45.455 0.00 0.00 0.00 3.36
3370 4706 4.965119 AAGCCAAAAATCACCTACGATC 57.035 40.909 0.00 0.00 0.00 3.69
3371 4707 5.163794 CGTAAAGCCAAAAATCACCTACGAT 60.164 40.000 0.00 0.00 33.31 3.73
3372 4708 4.152759 CGTAAAGCCAAAAATCACCTACGA 59.847 41.667 0.00 0.00 33.31 3.43
3373 4709 4.399978 CGTAAAGCCAAAAATCACCTACG 58.600 43.478 0.00 0.00 0.00 3.51
3374 4710 4.163552 GCGTAAAGCCAAAAATCACCTAC 58.836 43.478 0.00 0.00 40.81 3.18
3375 4711 3.120130 CGCGTAAAGCCAAAAATCACCTA 60.120 43.478 0.00 0.00 44.76 3.08
3376 4712 2.351350 CGCGTAAAGCCAAAAATCACCT 60.351 45.455 0.00 0.00 44.76 4.00
3377 4713 1.982913 CGCGTAAAGCCAAAAATCACC 59.017 47.619 0.00 0.00 44.76 4.02
3378 4714 2.403698 CACGCGTAAAGCCAAAAATCAC 59.596 45.455 13.44 0.00 44.76 3.06
3379 4715 2.033550 ACACGCGTAAAGCCAAAAATCA 59.966 40.909 13.44 0.00 44.76 2.57
3380 4716 2.655001 GACACGCGTAAAGCCAAAAATC 59.345 45.455 13.44 0.00 44.76 2.17
3381 4717 2.606065 GGACACGCGTAAAGCCAAAAAT 60.606 45.455 13.44 0.00 44.76 1.82
3382 4718 1.268640 GGACACGCGTAAAGCCAAAAA 60.269 47.619 13.44 0.00 44.76 1.94
3383 4719 0.308376 GGACACGCGTAAAGCCAAAA 59.692 50.000 13.44 0.00 44.76 2.44
3384 4720 1.833434 CGGACACGCGTAAAGCCAAA 61.833 55.000 13.44 0.00 44.76 3.28
3385 4721 2.311701 CGGACACGCGTAAAGCCAA 61.312 57.895 13.44 0.00 44.76 4.52
3386 4722 2.735478 CGGACACGCGTAAAGCCA 60.735 61.111 13.44 0.00 44.76 4.75
3387 4723 3.484547 CCGGACACGCGTAAAGCC 61.485 66.667 13.44 10.14 44.76 4.35
3388 4724 2.431260 TCCGGACACGCGTAAAGC 60.431 61.111 13.44 0.77 43.95 3.51
3389 4725 2.090524 GGTCCGGACACGCGTAAAG 61.091 63.158 34.40 1.44 39.22 1.85
3390 4726 2.049248 GGTCCGGACACGCGTAAA 60.049 61.111 34.40 0.00 39.22 2.01
3391 4727 3.293714 TGGTCCGGACACGCGTAA 61.294 61.111 34.40 8.93 39.22 3.18
3392 4728 4.041917 GTGGTCCGGACACGCGTA 62.042 66.667 34.40 11.31 39.22 4.42
3396 4732 3.800685 TTGCAGTGGTCCGGACACG 62.801 63.158 34.40 23.19 43.41 4.49
3397 4733 1.302511 ATTGCAGTGGTCCGGACAC 60.303 57.895 34.40 27.41 39.10 3.67
3398 4734 1.302431 CATTGCAGTGGTCCGGACA 60.302 57.895 34.40 18.59 0.00 4.02
3399 4735 2.690778 GCATTGCAGTGGTCCGGAC 61.691 63.158 27.04 27.04 0.00 4.79
3400 4736 2.359850 GCATTGCAGTGGTCCGGA 60.360 61.111 11.53 0.00 0.00 5.14
3401 4737 3.443045 GGCATTGCAGTGGTCCGG 61.443 66.667 11.53 0.00 0.00 5.14
3402 4738 2.360350 AGGCATTGCAGTGGTCCG 60.360 61.111 11.53 0.00 0.00 4.79
3403 4739 3.281240 CAGGCATTGCAGTGGTCC 58.719 61.111 11.53 4.60 0.00 4.46
3412 4748 2.557924 TGGTAGTCAAAAGCAGGCATTG 59.442 45.455 0.00 0.00 0.00 2.82
3413 4749 2.875296 TGGTAGTCAAAAGCAGGCATT 58.125 42.857 0.00 0.00 0.00 3.56
3414 4750 2.584835 TGGTAGTCAAAAGCAGGCAT 57.415 45.000 0.00 0.00 0.00 4.40
3415 4751 2.161855 CATGGTAGTCAAAAGCAGGCA 58.838 47.619 0.00 0.00 0.00 4.75
3416 4752 1.474077 CCATGGTAGTCAAAAGCAGGC 59.526 52.381 2.57 0.00 0.00 4.85
3417 4753 1.474077 GCCATGGTAGTCAAAAGCAGG 59.526 52.381 14.67 0.00 0.00 4.85
3418 4754 1.474077 GGCCATGGTAGTCAAAAGCAG 59.526 52.381 14.67 0.00 0.00 4.24
3419 4755 1.544724 GGCCATGGTAGTCAAAAGCA 58.455 50.000 14.67 0.00 0.00 3.91
3420 4756 0.817654 GGGCCATGGTAGTCAAAAGC 59.182 55.000 14.67 0.00 0.00 3.51
3421 4757 1.818674 GTGGGCCATGGTAGTCAAAAG 59.181 52.381 10.70 0.00 0.00 2.27
3422 4758 1.549037 GGTGGGCCATGGTAGTCAAAA 60.549 52.381 10.70 0.00 34.09 2.44
3423 4759 0.039035 GGTGGGCCATGGTAGTCAAA 59.961 55.000 10.70 0.00 34.09 2.69
3424 4760 1.688811 GGTGGGCCATGGTAGTCAA 59.311 57.895 10.70 0.00 34.09 3.18
3425 4761 2.305607 GGGTGGGCCATGGTAGTCA 61.306 63.158 10.70 4.06 36.17 3.41
3426 4762 2.305607 TGGGTGGGCCATGGTAGTC 61.306 63.158 10.70 0.00 36.17 2.59
3427 4763 2.204228 TGGGTGGGCCATGGTAGT 60.204 61.111 10.70 0.00 36.17 2.73
3428 4764 2.148723 TTGTGGGTGGGCCATGGTAG 62.149 60.000 10.70 0.00 36.17 3.18
3429 4765 1.730295 TTTGTGGGTGGGCCATGGTA 61.730 55.000 10.70 0.00 36.17 3.25
3430 4766 3.093415 TTTGTGGGTGGGCCATGGT 62.093 57.895 10.70 0.00 36.17 3.55
3431 4767 2.203758 TTTGTGGGTGGGCCATGG 60.204 61.111 10.70 7.63 36.17 3.66
3432 4768 2.582493 GGTTTGTGGGTGGGCCATG 61.582 63.158 10.70 0.00 36.17 3.66
3433 4769 2.203773 GGTTTGTGGGTGGGCCAT 60.204 61.111 10.70 0.00 36.17 4.40
3434 4770 4.548513 GGGTTTGTGGGTGGGCCA 62.549 66.667 0.00 0.00 36.17 5.36
3436 4772 4.233558 AGGGGTTTGTGGGTGGGC 62.234 66.667 0.00 0.00 0.00 5.36
3437 4773 2.117423 GAGGGGTTTGTGGGTGGG 59.883 66.667 0.00 0.00 0.00 4.61
3438 4774 2.117423 GGAGGGGTTTGTGGGTGG 59.883 66.667 0.00 0.00 0.00 4.61
3439 4775 2.117423 GGGAGGGGTTTGTGGGTG 59.883 66.667 0.00 0.00 0.00 4.61
3440 4776 2.037677 AGGGAGGGGTTTGTGGGT 60.038 61.111 0.00 0.00 0.00 4.51
3441 4777 2.763902 GAGGGAGGGGTTTGTGGG 59.236 66.667 0.00 0.00 0.00 4.61
3442 4778 2.064242 AACGAGGGAGGGGTTTGTGG 62.064 60.000 0.00 0.00 0.00 4.17
3443 4779 0.605589 GAACGAGGGAGGGGTTTGTG 60.606 60.000 0.00 0.00 0.00 3.33
3444 4780 1.759236 GAACGAGGGAGGGGTTTGT 59.241 57.895 0.00 0.00 0.00 2.83
3445 4781 1.375523 CGAACGAGGGAGGGGTTTG 60.376 63.158 0.00 0.00 0.00 2.93
3446 4782 3.066198 CGAACGAGGGAGGGGTTT 58.934 61.111 0.00 0.00 0.00 3.27
3447 4783 3.703127 GCGAACGAGGGAGGGGTT 61.703 66.667 0.00 0.00 0.00 4.11
3450 4786 4.796231 CACGCGAACGAGGGAGGG 62.796 72.222 15.93 0.00 43.93 4.30
3455 4791 4.117372 GAACGCACGCGAACGAGG 62.117 66.667 26.73 7.50 43.93 4.63
3456 4792 4.117372 GGAACGCACGCGAACGAG 62.117 66.667 26.73 13.35 43.93 4.18
3457 4793 4.634133 AGGAACGCACGCGAACGA 62.634 61.111 26.73 0.00 43.93 3.85
3459 4795 4.719616 GCAGGAACGCACGCGAAC 62.720 66.667 19.66 10.81 42.83 3.95
3464 4800 2.664851 TTCAGGCAGGAACGCACG 60.665 61.111 0.00 0.00 0.00 5.34
3465 4801 2.970974 GCTTCAGGCAGGAACGCAC 61.971 63.158 0.00 0.00 41.35 5.34
3466 4802 2.669569 GCTTCAGGCAGGAACGCA 60.670 61.111 0.00 0.00 41.35 5.24
3467 4803 3.793144 CGCTTCAGGCAGGAACGC 61.793 66.667 0.00 0.00 41.91 4.84
3468 4804 3.121030 CCGCTTCAGGCAGGAACG 61.121 66.667 0.00 0.00 41.91 3.95
3469 4805 2.035442 GTCCGCTTCAGGCAGGAAC 61.035 63.158 0.00 0.00 42.08 3.62
3470 4806 2.050836 TTGTCCGCTTCAGGCAGGAA 62.051 55.000 0.00 0.00 42.08 3.36
3471 4807 2.515979 TTGTCCGCTTCAGGCAGGA 61.516 57.895 0.00 0.00 41.91 3.86
3472 4808 2.032528 TTGTCCGCTTCAGGCAGG 59.967 61.111 0.00 0.00 41.91 4.85
3473 4809 1.597854 TGTTGTCCGCTTCAGGCAG 60.598 57.895 0.00 0.00 41.91 4.85
3474 4810 1.891919 GTGTTGTCCGCTTCAGGCA 60.892 57.895 0.00 0.00 41.91 4.75
3475 4811 2.617274 GGTGTTGTCCGCTTCAGGC 61.617 63.158 0.00 0.00 37.64 4.85
3476 4812 2.317609 CGGTGTTGTCCGCTTCAGG 61.318 63.158 0.00 0.00 43.96 3.86
3477 4813 3.244105 CGGTGTTGTCCGCTTCAG 58.756 61.111 0.00 0.00 43.96 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.