Multiple sequence alignment - TraesCS5B01G154200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G154200 chr5B 100.000 3670 0 0 1 3670 283985922 283989591 0.000000e+00 6778.0
1 TraesCS5B01G154200 chr5B 100.000 47 0 0 3096 3142 704989370 704989324 1.820000e-13 87.9
2 TraesCS5B01G154200 chr5D 91.368 2676 128 39 467 3084 251933504 251936134 0.000000e+00 3567.0
3 TraesCS5B01G154200 chr5D 88.690 336 23 6 3347 3670 251936259 251936591 2.660000e-106 396.0
4 TraesCS5B01G154200 chr5D 95.946 148 5 1 1 147 251933354 251933501 4.740000e-59 239.0
5 TraesCS5B01G154200 chr5D 86.364 110 6 4 3156 3265 251936130 251936230 1.080000e-20 111.0
6 TraesCS5B01G154200 chr5A 91.599 1476 59 19 1533 2975 334739155 334740598 0.000000e+00 1978.0
7 TraesCS5B01G154200 chr5A 87.132 816 60 21 657 1457 334738088 334738873 0.000000e+00 883.0
8 TraesCS5B01G154200 chr5A 95.808 334 11 3 147 479 374885841 374886172 1.500000e-148 536.0
9 TraesCS5B01G154200 chr5A 95.679 324 12 2 147 470 40613592 40613913 1.510000e-143 520.0
10 TraesCS5B01G154200 chr5A 91.045 201 7 6 466 664 334737652 334737843 1.010000e-65 261.0
11 TraesCS5B01G154200 chr5A 92.617 149 7 2 1 145 334737500 334737648 1.030000e-50 211.0
12 TraesCS5B01G154200 chr1B 93.285 1102 47 9 1956 3050 657321302 657322383 0.000000e+00 1600.0
13 TraesCS5B01G154200 chr1B 90.617 373 26 5 1341 1711 657320918 657320553 1.530000e-133 486.0
14 TraesCS5B01G154200 chr1B 86.592 179 9 4 3160 3338 657322392 657322555 2.250000e-42 183.0
15 TraesCS5B01G154200 chr1A 91.573 1151 50 13 1888 3007 566601980 566603114 0.000000e+00 1544.0
16 TraesCS5B01G154200 chr1A 86.270 874 92 15 843 1711 566600278 566599428 0.000000e+00 924.0
17 TraesCS5B01G154200 chr1A 84.157 890 86 23 843 1711 566600515 566601370 0.000000e+00 811.0
18 TraesCS5B01G154200 chr1A 81.090 312 21 15 3160 3469 566603148 566603423 7.980000e-52 215.0
19 TraesCS5B01G154200 chr3D 96.885 321 9 1 147 467 210410467 210410148 1.500000e-148 536.0
20 TraesCS5B01G154200 chr3D 82.278 553 74 14 2192 2723 13598851 13599400 1.200000e-124 457.0
21 TraesCS5B01G154200 chr2A 96.594 323 10 1 147 469 15461427 15461106 5.390000e-148 534.0
22 TraesCS5B01G154200 chr2A 96.262 321 11 1 147 467 40502629 40502310 3.250000e-145 525.0
23 TraesCS5B01G154200 chr2A 95.950 321 12 1 147 467 493336273 493336592 1.510000e-143 520.0
24 TraesCS5B01G154200 chr7B 96.573 321 9 2 147 467 435675952 435675634 6.980000e-147 531.0
25 TraesCS5B01G154200 chr7B 96.012 326 12 1 147 472 680209991 680209667 2.510000e-146 529.0
26 TraesCS5B01G154200 chr4B 95.975 323 12 1 147 469 363317556 363317877 1.170000e-144 523.0
27 TraesCS5B01G154200 chr3A 80.916 655 93 22 2195 2827 23377349 23376705 4.260000e-134 488.0
28 TraesCS5B01G154200 chr3A 78.891 649 106 14 2193 2818 23309654 23309014 9.490000e-111 411.0
29 TraesCS5B01G154200 chr3A 95.000 60 3 0 3098 3157 638911014 638911073 1.080000e-15 95.3
30 TraesCS5B01G154200 chr3B 79.905 632 94 19 2195 2804 19878051 19878671 2.020000e-117 433.0
31 TraesCS5B01G154200 chr3B 76.344 651 121 20 2196 2822 19933843 19934484 5.910000e-83 318.0
32 TraesCS5B01G154200 chr1D 95.161 62 2 1 3098 3158 398734052 398734113 3.020000e-16 97.1
33 TraesCS5B01G154200 chr1D 89.062 64 6 1 3079 3142 120317513 120317575 1.090000e-10 78.7
34 TraesCS5B01G154200 chr6B 98.039 51 1 0 3092 3142 516087889 516087939 5.050000e-14 89.8
35 TraesCS5B01G154200 chr6B 96.078 51 2 0 3092 3142 38619699 38619649 2.350000e-12 84.2
36 TraesCS5B01G154200 chr2D 89.231 65 3 2 3098 3158 367775203 367775139 1.090000e-10 78.7
37 TraesCS5B01G154200 chr2D 89.231 65 3 2 3098 3158 571023622 571023686 1.090000e-10 78.7
38 TraesCS5B01G154200 chr6A 86.957 69 5 4 3075 3142 111559482 111559417 1.410000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G154200 chr5B 283985922 283989591 3669 False 6778.000000 6778 100.000000 1 3670 1 chr5B.!!$F1 3669
1 TraesCS5B01G154200 chr5D 251933354 251936591 3237 False 1078.250000 3567 90.592000 1 3670 4 chr5D.!!$F1 3669
2 TraesCS5B01G154200 chr5A 334737500 334740598 3098 False 833.250000 1978 90.598250 1 2975 4 chr5A.!!$F3 2974
3 TraesCS5B01G154200 chr1B 657321302 657322555 1253 False 891.500000 1600 89.938500 1956 3338 2 chr1B.!!$F1 1382
4 TraesCS5B01G154200 chr1A 566599428 566600278 850 True 924.000000 924 86.270000 843 1711 1 chr1A.!!$R1 868
5 TraesCS5B01G154200 chr1A 566600515 566603423 2908 False 856.666667 1544 85.606667 843 3469 3 chr1A.!!$F1 2626
6 TraesCS5B01G154200 chr3D 13598851 13599400 549 False 457.000000 457 82.278000 2192 2723 1 chr3D.!!$F1 531
7 TraesCS5B01G154200 chr3A 23376705 23377349 644 True 488.000000 488 80.916000 2195 2827 1 chr3A.!!$R2 632
8 TraesCS5B01G154200 chr3A 23309014 23309654 640 True 411.000000 411 78.891000 2193 2818 1 chr3A.!!$R1 625
9 TraesCS5B01G154200 chr3B 19878051 19878671 620 False 433.000000 433 79.905000 2195 2804 1 chr3B.!!$F1 609
10 TraesCS5B01G154200 chr3B 19933843 19934484 641 False 318.000000 318 76.344000 2196 2822 1 chr3B.!!$F2 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 205 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.0 6.36 0.0 41.22 4.55 F
939 1235 0.039035 AGCAAACCCAAGCCCGAATA 59.961 50.0 0.00 0.0 0.00 1.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1506 1818 0.614812 GCCATTGTTCTGCCCCAAAT 59.385 50.0 0.0 0.0 0.00 2.32 R
2772 3786 0.104671 GCAGCCAGGAAGCAAAAACA 59.895 50.0 0.0 0.0 34.23 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 50 3.102972 CTCTCTCCAGTGATTCCCTTCA 58.897 50.000 0.00 0.00 0.00 3.02
80 85 1.990060 CACCACCACCCCTCTCGAT 60.990 63.158 0.00 0.00 0.00 3.59
129 134 3.526211 CCAATCATGGCCCATGTCT 57.474 52.632 22.70 9.41 41.98 3.41
147 152 2.606725 GTCTCATGTCGATTCAGCAAGG 59.393 50.000 0.00 0.00 0.00 3.61
148 153 1.329906 CTCATGTCGATTCAGCAAGGC 59.670 52.381 0.00 0.00 0.00 4.35
149 154 1.089112 CATGTCGATTCAGCAAGGCA 58.911 50.000 0.00 0.00 0.00 4.75
150 155 1.674441 CATGTCGATTCAGCAAGGCAT 59.326 47.619 0.00 0.00 0.00 4.40
151 156 1.089112 TGTCGATTCAGCAAGGCATG 58.911 50.000 0.00 0.00 0.00 4.06
152 157 1.089920 GTCGATTCAGCAAGGCATGT 58.910 50.000 0.00 0.00 0.00 3.21
153 158 2.279741 GTCGATTCAGCAAGGCATGTA 58.720 47.619 0.00 0.00 0.00 2.29
154 159 2.030946 GTCGATTCAGCAAGGCATGTAC 59.969 50.000 0.00 0.00 0.00 2.90
155 160 2.009051 CGATTCAGCAAGGCATGTACA 58.991 47.619 0.00 0.00 0.00 2.90
156 161 2.419673 CGATTCAGCAAGGCATGTACAA 59.580 45.455 0.00 0.00 0.00 2.41
157 162 3.065786 CGATTCAGCAAGGCATGTACAAT 59.934 43.478 0.00 0.00 0.00 2.71
158 163 3.853831 TTCAGCAAGGCATGTACAATG 57.146 42.857 0.00 0.12 0.00 2.82
159 164 1.473677 TCAGCAAGGCATGTACAATGC 59.526 47.619 17.01 17.01 43.85 3.56
160 165 1.202817 CAGCAAGGCATGTACAATGCA 59.797 47.619 22.92 0.00 46.21 3.96
161 166 2.104967 AGCAAGGCATGTACAATGCAT 58.895 42.857 22.92 17.15 46.21 3.96
162 167 3.067040 CAGCAAGGCATGTACAATGCATA 59.933 43.478 22.92 0.00 46.21 3.14
163 168 3.317149 AGCAAGGCATGTACAATGCATAG 59.683 43.478 22.92 15.54 46.21 2.23
164 169 3.635331 CAAGGCATGTACAATGCATAGC 58.365 45.455 22.92 11.57 46.21 2.97
165 170 2.233271 AGGCATGTACAATGCATAGCC 58.767 47.619 22.92 16.47 46.21 3.93
166 171 2.158564 AGGCATGTACAATGCATAGCCT 60.159 45.455 22.92 17.88 46.21 4.58
167 172 2.227388 GGCATGTACAATGCATAGCCTC 59.773 50.000 22.92 7.94 46.21 4.70
168 173 2.880268 GCATGTACAATGCATAGCCTCA 59.120 45.455 19.12 0.00 44.00 3.86
169 174 3.316029 GCATGTACAATGCATAGCCTCAA 59.684 43.478 19.12 0.00 44.00 3.02
170 175 4.556104 GCATGTACAATGCATAGCCTCAAG 60.556 45.833 19.12 0.00 44.00 3.02
171 176 3.544684 TGTACAATGCATAGCCTCAAGG 58.455 45.455 0.00 0.00 38.53 3.61
172 177 2.814805 ACAATGCATAGCCTCAAGGT 57.185 45.000 0.00 0.00 37.57 3.50
173 178 2.372264 ACAATGCATAGCCTCAAGGTG 58.628 47.619 0.00 0.00 37.57 4.00
174 179 2.025981 ACAATGCATAGCCTCAAGGTGA 60.026 45.455 0.00 0.00 37.57 4.02
175 180 3.220110 CAATGCATAGCCTCAAGGTGAT 58.780 45.455 0.00 0.00 37.57 3.06
176 181 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
177 182 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
178 183 1.602311 CATAGCCTCAAGGTGATGCC 58.398 55.000 0.00 0.00 38.54 4.40
192 197 2.588989 TGCCTCGCATGCCATGTA 59.411 55.556 13.15 0.00 31.71 2.29
193 198 1.524393 TGCCTCGCATGCCATGTAG 60.524 57.895 13.15 4.55 31.71 2.74
194 199 2.256591 GCCTCGCATGCCATGTAGG 61.257 63.158 18.53 18.53 38.09 3.18
195 200 1.447217 CCTCGCATGCCATGTAGGA 59.553 57.895 18.19 8.22 41.22 2.94
196 201 0.035881 CCTCGCATGCCATGTAGGAT 59.964 55.000 18.19 0.00 41.22 3.24
197 202 1.436600 CTCGCATGCCATGTAGGATC 58.563 55.000 13.15 0.00 41.22 3.36
198 203 0.319813 TCGCATGCCATGTAGGATCG 60.320 55.000 13.15 0.23 41.22 3.69
199 204 1.293963 CGCATGCCATGTAGGATCGG 61.294 60.000 13.15 0.00 41.22 4.18
200 205 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55
201 206 1.339438 GCATGCCATGTAGGATCGGAT 60.339 52.381 6.36 0.00 41.22 4.18
202 207 2.093500 GCATGCCATGTAGGATCGGATA 60.093 50.000 6.36 0.00 41.22 2.59
203 208 3.432749 GCATGCCATGTAGGATCGGATAT 60.433 47.826 6.36 0.00 41.22 1.63
204 209 3.893326 TGCCATGTAGGATCGGATATG 57.107 47.619 0.00 0.00 41.22 1.78
205 210 3.440127 TGCCATGTAGGATCGGATATGA 58.560 45.455 0.00 0.00 41.22 2.15
206 211 3.195610 TGCCATGTAGGATCGGATATGAC 59.804 47.826 0.00 0.00 41.22 3.06
207 212 3.735208 GCCATGTAGGATCGGATATGACG 60.735 52.174 0.00 0.00 41.22 4.35
208 213 3.444034 CCATGTAGGATCGGATATGACGT 59.556 47.826 0.00 0.00 41.22 4.34
209 214 4.638865 CCATGTAGGATCGGATATGACGTA 59.361 45.833 0.00 0.00 41.22 3.57
210 215 5.124936 CCATGTAGGATCGGATATGACGTAA 59.875 44.000 0.00 0.00 41.22 3.18
211 216 6.349860 CCATGTAGGATCGGATATGACGTAAA 60.350 42.308 0.00 0.00 41.22 2.01
212 217 6.250344 TGTAGGATCGGATATGACGTAAAG 57.750 41.667 0.00 0.00 0.00 1.85
213 218 5.766670 TGTAGGATCGGATATGACGTAAAGT 59.233 40.000 0.00 0.00 0.00 2.66
214 219 6.936335 TGTAGGATCGGATATGACGTAAAGTA 59.064 38.462 0.00 0.00 0.00 2.24
215 220 6.497785 AGGATCGGATATGACGTAAAGTAG 57.502 41.667 0.00 0.00 0.00 2.57
216 221 5.415077 AGGATCGGATATGACGTAAAGTAGG 59.585 44.000 0.00 0.00 0.00 3.18
217 222 5.182760 GGATCGGATATGACGTAAAGTAGGT 59.817 44.000 0.00 0.00 0.00 3.08
218 223 6.294397 GGATCGGATATGACGTAAAGTAGGTT 60.294 42.308 0.00 0.00 0.00 3.50
219 224 6.064846 TCGGATATGACGTAAAGTAGGTTC 57.935 41.667 0.00 0.00 0.00 3.62
220 225 4.908156 CGGATATGACGTAAAGTAGGTTCG 59.092 45.833 0.00 0.00 0.00 3.95
221 226 5.218139 GGATATGACGTAAAGTAGGTTCGG 58.782 45.833 0.00 0.00 0.00 4.30
222 227 5.009010 GGATATGACGTAAAGTAGGTTCGGA 59.991 44.000 0.00 0.00 0.00 4.55
223 228 4.996788 ATGACGTAAAGTAGGTTCGGAT 57.003 40.909 0.00 0.00 0.00 4.18
224 229 7.094634 GGATATGACGTAAAGTAGGTTCGGATA 60.095 40.741 0.00 0.00 0.00 2.59
225 230 5.490139 TGACGTAAAGTAGGTTCGGATAG 57.510 43.478 0.00 0.00 0.00 2.08
226 231 4.336433 TGACGTAAAGTAGGTTCGGATAGG 59.664 45.833 0.00 0.00 0.00 2.57
227 232 3.633986 ACGTAAAGTAGGTTCGGATAGGG 59.366 47.826 0.00 0.00 0.00 3.53
228 233 3.885297 CGTAAAGTAGGTTCGGATAGGGA 59.115 47.826 0.00 0.00 0.00 4.20
229 234 4.339247 CGTAAAGTAGGTTCGGATAGGGAA 59.661 45.833 0.00 0.00 0.00 3.97
230 235 5.506982 CGTAAAGTAGGTTCGGATAGGGAAG 60.507 48.000 0.00 0.00 0.00 3.46
231 236 2.317973 AGTAGGTTCGGATAGGGAAGC 58.682 52.381 0.00 0.00 41.06 3.86
232 237 1.000496 GTAGGTTCGGATAGGGAAGCG 60.000 57.143 0.00 0.00 44.35 4.68
233 238 1.069258 GGTTCGGATAGGGAAGCGG 59.931 63.158 0.00 0.00 32.96 5.52
234 239 1.069258 GTTCGGATAGGGAAGCGGG 59.931 63.158 0.00 0.00 0.00 6.13
235 240 1.075822 TTCGGATAGGGAAGCGGGA 60.076 57.895 0.00 0.00 0.00 5.14
236 241 0.471211 TTCGGATAGGGAAGCGGGAT 60.471 55.000 0.00 0.00 0.00 3.85
237 242 0.898789 TCGGATAGGGAAGCGGGATC 60.899 60.000 0.00 0.00 0.00 3.36
238 243 1.889530 CGGATAGGGAAGCGGGATCC 61.890 65.000 1.92 1.92 36.16 3.36
239 244 0.545548 GGATAGGGAAGCGGGATCCT 60.546 60.000 12.58 0.00 37.14 3.24
240 245 0.899019 GATAGGGAAGCGGGATCCTC 59.101 60.000 12.58 4.01 37.14 3.71
241 246 0.489567 ATAGGGAAGCGGGATCCTCT 59.510 55.000 12.58 6.48 37.14 3.69
242 247 0.178958 TAGGGAAGCGGGATCCTCTC 60.179 60.000 12.58 0.44 37.14 3.20
243 248 2.512355 GGGAAGCGGGATCCTCTCC 61.512 68.421 12.58 11.82 44.11 3.71
244 249 1.762460 GGAAGCGGGATCCTCTCCA 60.762 63.158 12.58 0.00 46.98 3.86
245 250 1.745264 GAAGCGGGATCCTCTCCAG 59.255 63.158 12.58 0.00 46.98 3.86
246 251 1.753368 GAAGCGGGATCCTCTCCAGG 61.753 65.000 12.58 0.00 46.98 4.45
255 260 3.465403 CTCTCCAGGAGGCGGGTG 61.465 72.222 17.10 0.00 38.35 4.61
260 265 4.020617 CAGGAGGCGGGTGCTTGA 62.021 66.667 0.00 0.00 42.25 3.02
261 266 3.249189 AGGAGGCGGGTGCTTGAA 61.249 61.111 0.00 0.00 42.25 2.69
262 267 2.747855 GGAGGCGGGTGCTTGAAG 60.748 66.667 0.00 0.00 42.25 3.02
263 268 2.347490 GAGGCGGGTGCTTGAAGA 59.653 61.111 0.00 0.00 42.25 2.87
264 269 1.743252 GAGGCGGGTGCTTGAAGAG 60.743 63.158 0.00 0.00 42.25 2.85
265 270 2.172483 GAGGCGGGTGCTTGAAGAGA 62.172 60.000 0.00 0.00 42.25 3.10
266 271 1.302511 GGCGGGTGCTTGAAGAGAA 60.303 57.895 0.00 0.00 42.25 2.87
267 272 0.889186 GGCGGGTGCTTGAAGAGAAA 60.889 55.000 0.00 0.00 42.25 2.52
268 273 0.951558 GCGGGTGCTTGAAGAGAAAA 59.048 50.000 0.00 0.00 38.39 2.29
269 274 1.336755 GCGGGTGCTTGAAGAGAAAAA 59.663 47.619 0.00 0.00 38.39 1.94
270 275 2.605580 GCGGGTGCTTGAAGAGAAAAAG 60.606 50.000 0.00 0.00 38.39 2.27
271 276 2.618709 CGGGTGCTTGAAGAGAAAAAGT 59.381 45.455 0.00 0.00 0.00 2.66
272 277 3.813166 CGGGTGCTTGAAGAGAAAAAGTA 59.187 43.478 0.00 0.00 0.00 2.24
273 278 4.455877 CGGGTGCTTGAAGAGAAAAAGTAT 59.544 41.667 0.00 0.00 0.00 2.12
274 279 5.617751 CGGGTGCTTGAAGAGAAAAAGTATG 60.618 44.000 0.00 0.00 0.00 2.39
275 280 5.335976 GGGTGCTTGAAGAGAAAAAGTATGG 60.336 44.000 0.00 0.00 0.00 2.74
276 281 5.241728 GGTGCTTGAAGAGAAAAAGTATGGT 59.758 40.000 0.00 0.00 0.00 3.55
277 282 6.374578 GTGCTTGAAGAGAAAAAGTATGGTC 58.625 40.000 0.00 0.00 0.00 4.02
278 283 5.473504 TGCTTGAAGAGAAAAAGTATGGTCC 59.526 40.000 0.00 0.00 0.00 4.46
279 284 5.390991 GCTTGAAGAGAAAAAGTATGGTCCG 60.391 44.000 0.00 0.00 0.00 4.79
280 285 4.575885 TGAAGAGAAAAAGTATGGTCCGG 58.424 43.478 0.00 0.00 0.00 5.14
281 286 4.041198 TGAAGAGAAAAAGTATGGTCCGGT 59.959 41.667 0.00 0.00 0.00 5.28
282 287 3.939066 AGAGAAAAAGTATGGTCCGGTG 58.061 45.455 0.00 0.00 0.00 4.94
283 288 3.581332 AGAGAAAAAGTATGGTCCGGTGA 59.419 43.478 0.00 0.00 0.00 4.02
284 289 3.671716 AGAAAAAGTATGGTCCGGTGAC 58.328 45.455 0.00 0.00 40.98 3.67
285 290 3.071892 AGAAAAAGTATGGTCCGGTGACA 59.928 43.478 0.00 0.00 43.65 3.58
286 291 3.495434 AAAAGTATGGTCCGGTGACAA 57.505 42.857 0.00 0.00 43.65 3.18
287 292 3.495434 AAAGTATGGTCCGGTGACAAA 57.505 42.857 0.00 0.00 43.65 2.83
288 293 3.495434 AAGTATGGTCCGGTGACAAAA 57.505 42.857 0.00 0.00 43.65 2.44
289 294 3.053831 AGTATGGTCCGGTGACAAAAG 57.946 47.619 0.00 0.00 43.65 2.27
290 295 1.467342 GTATGGTCCGGTGACAAAAGC 59.533 52.381 0.00 0.00 43.65 3.51
291 296 0.110486 ATGGTCCGGTGACAAAAGCT 59.890 50.000 0.00 0.00 43.65 3.74
292 297 0.759959 TGGTCCGGTGACAAAAGCTA 59.240 50.000 0.00 0.00 43.65 3.32
293 298 1.141254 TGGTCCGGTGACAAAAGCTAA 59.859 47.619 0.00 0.00 43.65 3.09
294 299 2.223745 GGTCCGGTGACAAAAGCTAAA 58.776 47.619 0.00 0.00 43.65 1.85
295 300 2.619646 GGTCCGGTGACAAAAGCTAAAA 59.380 45.455 0.00 0.00 43.65 1.52
296 301 3.067040 GGTCCGGTGACAAAAGCTAAAAA 59.933 43.478 0.00 0.00 43.65 1.94
297 302 4.287720 GTCCGGTGACAAAAGCTAAAAAG 58.712 43.478 0.00 0.00 41.37 2.27
298 303 3.316868 TCCGGTGACAAAAGCTAAAAAGG 59.683 43.478 0.00 0.00 0.00 3.11
299 304 3.067601 CCGGTGACAAAAGCTAAAAAGGT 59.932 43.478 0.00 0.00 0.00 3.50
300 305 4.440940 CCGGTGACAAAAGCTAAAAAGGTT 60.441 41.667 0.00 0.00 0.00 3.50
301 306 4.502645 CGGTGACAAAAGCTAAAAAGGTTG 59.497 41.667 0.00 0.00 0.00 3.77
302 307 5.656480 GGTGACAAAAGCTAAAAAGGTTGA 58.344 37.500 0.00 0.00 0.00 3.18
303 308 6.103330 GGTGACAAAAGCTAAAAAGGTTGAA 58.897 36.000 0.00 0.00 0.00 2.69
304 309 6.255670 GGTGACAAAAGCTAAAAAGGTTGAAG 59.744 38.462 0.00 0.00 0.00 3.02
305 310 6.811665 GTGACAAAAGCTAAAAAGGTTGAAGT 59.188 34.615 0.00 0.00 0.00 3.01
306 311 6.811170 TGACAAAAGCTAAAAAGGTTGAAGTG 59.189 34.615 0.00 0.00 0.00 3.16
307 312 6.930731 ACAAAAGCTAAAAAGGTTGAAGTGA 58.069 32.000 0.00 0.00 0.00 3.41
308 313 7.382898 ACAAAAGCTAAAAAGGTTGAAGTGAA 58.617 30.769 0.00 0.00 0.00 3.18
309 314 7.875554 ACAAAAGCTAAAAAGGTTGAAGTGAAA 59.124 29.630 0.00 0.00 0.00 2.69
310 315 8.716909 CAAAAGCTAAAAAGGTTGAAGTGAAAA 58.283 29.630 0.00 0.00 0.00 2.29
311 316 8.479313 AAAGCTAAAAAGGTTGAAGTGAAAAG 57.521 30.769 0.00 0.00 0.00 2.27
312 317 7.170393 AGCTAAAAAGGTTGAAGTGAAAAGT 57.830 32.000 0.00 0.00 0.00 2.66
313 318 8.288689 AGCTAAAAAGGTTGAAGTGAAAAGTA 57.711 30.769 0.00 0.00 0.00 2.24
314 319 8.406297 AGCTAAAAAGGTTGAAGTGAAAAGTAG 58.594 33.333 0.00 0.00 0.00 2.57
315 320 8.403236 GCTAAAAAGGTTGAAGTGAAAAGTAGA 58.597 33.333 0.00 0.00 0.00 2.59
316 321 9.937175 CTAAAAAGGTTGAAGTGAAAAGTAGAG 57.063 33.333 0.00 0.00 0.00 2.43
317 322 8.575649 AAAAAGGTTGAAGTGAAAAGTAGAGA 57.424 30.769 0.00 0.00 0.00 3.10
318 323 8.753497 AAAAGGTTGAAGTGAAAAGTAGAGAT 57.247 30.769 0.00 0.00 0.00 2.75
319 324 7.736447 AAGGTTGAAGTGAAAAGTAGAGATG 57.264 36.000 0.00 0.00 0.00 2.90
320 325 5.703130 AGGTTGAAGTGAAAAGTAGAGATGC 59.297 40.000 0.00 0.00 0.00 3.91
321 326 5.470098 GGTTGAAGTGAAAAGTAGAGATGCA 59.530 40.000 0.00 0.00 0.00 3.96
322 327 6.150140 GGTTGAAGTGAAAAGTAGAGATGCAT 59.850 38.462 0.00 0.00 0.00 3.96
323 328 6.732531 TGAAGTGAAAAGTAGAGATGCATG 57.267 37.500 2.46 0.00 0.00 4.06
324 329 6.233434 TGAAGTGAAAAGTAGAGATGCATGT 58.767 36.000 2.46 0.00 0.00 3.21
325 330 6.148315 TGAAGTGAAAAGTAGAGATGCATGTG 59.852 38.462 2.46 0.00 0.00 3.21
326 331 5.555017 AGTGAAAAGTAGAGATGCATGTGT 58.445 37.500 2.46 0.00 0.00 3.72
327 332 6.701340 AGTGAAAAGTAGAGATGCATGTGTA 58.299 36.000 2.46 0.00 0.00 2.90
328 333 6.591834 AGTGAAAAGTAGAGATGCATGTGTAC 59.408 38.462 19.88 19.88 0.00 2.90
329 334 6.591834 GTGAAAAGTAGAGATGCATGTGTACT 59.408 38.462 23.22 23.22 32.62 2.73
330 335 7.759886 GTGAAAAGTAGAGATGCATGTGTACTA 59.240 37.037 27.25 13.62 30.49 1.82
331 336 7.976175 TGAAAAGTAGAGATGCATGTGTACTAG 59.024 37.037 27.25 0.00 30.49 2.57
332 337 7.646548 AAAGTAGAGATGCATGTGTACTAGA 57.353 36.000 27.25 0.00 30.49 2.43
333 338 6.875948 AGTAGAGATGCATGTGTACTAGAG 57.124 41.667 26.28 0.00 30.07 2.43
334 339 6.361433 AGTAGAGATGCATGTGTACTAGAGT 58.639 40.000 26.28 7.72 30.07 3.24
335 340 5.766150 AGAGATGCATGTGTACTAGAGTC 57.234 43.478 2.46 0.00 0.00 3.36
336 341 5.445069 AGAGATGCATGTGTACTAGAGTCT 58.555 41.667 2.46 0.00 0.00 3.24
337 342 5.890985 AGAGATGCATGTGTACTAGAGTCTT 59.109 40.000 2.46 0.00 0.00 3.01
338 343 6.379703 AGAGATGCATGTGTACTAGAGTCTTT 59.620 38.462 2.46 0.00 0.00 2.52
339 344 7.558081 AGAGATGCATGTGTACTAGAGTCTTTA 59.442 37.037 2.46 0.00 0.00 1.85
340 345 8.243961 AGATGCATGTGTACTAGAGTCTTTAT 57.756 34.615 2.46 0.00 0.00 1.40
341 346 8.700051 AGATGCATGTGTACTAGAGTCTTTATT 58.300 33.333 2.46 0.00 0.00 1.40
342 347 9.319143 GATGCATGTGTACTAGAGTCTTTATTT 57.681 33.333 2.46 0.00 0.00 1.40
343 348 9.672673 ATGCATGTGTACTAGAGTCTTTATTTT 57.327 29.630 0.00 0.00 0.00 1.82
344 349 9.151471 TGCATGTGTACTAGAGTCTTTATTTTC 57.849 33.333 0.00 0.00 0.00 2.29
345 350 9.372369 GCATGTGTACTAGAGTCTTTATTTTCT 57.628 33.333 0.00 0.00 0.00 2.52
366 371 9.807921 TTTTCTAATTTCTTAATGAGGTCCACT 57.192 29.630 0.00 0.00 0.00 4.00
369 374 9.268282 TCTAATTTCTTAATGAGGTCCACTAGT 57.732 33.333 0.00 0.00 0.00 2.57
370 375 9.319143 CTAATTTCTTAATGAGGTCCACTAGTG 57.681 37.037 16.34 16.34 0.00 2.74
381 386 2.698855 CCACTAGTGGTAGCTTGCAT 57.301 50.000 30.57 0.00 45.53 3.96
382 387 2.991250 CCACTAGTGGTAGCTTGCATT 58.009 47.619 30.57 0.00 45.53 3.56
383 388 2.679837 CCACTAGTGGTAGCTTGCATTG 59.320 50.000 30.57 3.32 45.53 2.82
384 389 3.599343 CACTAGTGGTAGCTTGCATTGA 58.401 45.455 15.49 0.00 0.00 2.57
385 390 3.620374 CACTAGTGGTAGCTTGCATTGAG 59.380 47.826 15.49 0.00 0.00 3.02
386 391 2.119801 AGTGGTAGCTTGCATTGAGG 57.880 50.000 0.00 0.00 0.00 3.86
387 392 1.630369 AGTGGTAGCTTGCATTGAGGA 59.370 47.619 0.00 0.00 0.00 3.71
388 393 2.012673 GTGGTAGCTTGCATTGAGGAG 58.987 52.381 0.00 0.00 0.00 3.69
389 394 1.908619 TGGTAGCTTGCATTGAGGAGA 59.091 47.619 0.00 0.00 0.00 3.71
390 395 2.305635 TGGTAGCTTGCATTGAGGAGAA 59.694 45.455 0.00 0.00 0.00 2.87
391 396 3.244875 TGGTAGCTTGCATTGAGGAGAAA 60.245 43.478 0.00 0.00 0.00 2.52
392 397 3.758554 GGTAGCTTGCATTGAGGAGAAAA 59.241 43.478 0.00 0.00 0.00 2.29
393 398 4.218417 GGTAGCTTGCATTGAGGAGAAAAA 59.782 41.667 0.00 0.00 0.00 1.94
417 422 9.869757 AAAATAAATGTAGGTGCCTCAAATTAC 57.130 29.630 0.00 0.00 0.00 1.89
418 423 8.823220 AATAAATGTAGGTGCCTCAAATTACT 57.177 30.769 0.00 0.00 0.00 2.24
419 424 8.823220 ATAAATGTAGGTGCCTCAAATTACTT 57.177 30.769 0.00 0.00 0.00 2.24
420 425 7.539034 AAATGTAGGTGCCTCAAATTACTTT 57.461 32.000 0.00 0.00 0.00 2.66
421 426 7.539034 AATGTAGGTGCCTCAAATTACTTTT 57.461 32.000 0.00 0.00 0.00 2.27
422 427 6.969993 TGTAGGTGCCTCAAATTACTTTTT 57.030 33.333 0.00 0.00 0.00 1.94
423 428 6.744112 TGTAGGTGCCTCAAATTACTTTTTG 58.256 36.000 0.00 0.00 37.83 2.44
424 429 5.869649 AGGTGCCTCAAATTACTTTTTGT 57.130 34.783 0.00 0.00 37.73 2.83
425 430 5.842907 AGGTGCCTCAAATTACTTTTTGTC 58.157 37.500 0.00 0.00 37.73 3.18
426 431 5.362430 AGGTGCCTCAAATTACTTTTTGTCA 59.638 36.000 0.00 0.00 37.73 3.58
427 432 6.041979 AGGTGCCTCAAATTACTTTTTGTCAT 59.958 34.615 0.00 0.00 37.73 3.06
428 433 6.146021 GGTGCCTCAAATTACTTTTTGTCATG 59.854 38.462 0.00 0.00 37.73 3.07
429 434 6.922957 GTGCCTCAAATTACTTTTTGTCATGA 59.077 34.615 0.00 0.00 37.73 3.07
430 435 7.115378 GTGCCTCAAATTACTTTTTGTCATGAG 59.885 37.037 0.00 0.00 37.73 2.90
431 436 6.587608 GCCTCAAATTACTTTTTGTCATGAGG 59.412 38.462 12.43 12.43 37.73 3.86
432 437 6.587608 CCTCAAATTACTTTTTGTCATGAGGC 59.412 38.462 0.00 0.00 37.73 4.70
433 438 7.048629 TCAAATTACTTTTTGTCATGAGGCA 57.951 32.000 0.00 0.00 37.73 4.75
434 439 7.669427 TCAAATTACTTTTTGTCATGAGGCAT 58.331 30.769 0.00 0.00 37.73 4.40
435 440 8.801299 TCAAATTACTTTTTGTCATGAGGCATA 58.199 29.630 0.00 0.00 37.73 3.14
436 441 9.590451 CAAATTACTTTTTGTCATGAGGCATAT 57.410 29.630 0.00 0.00 32.99 1.78
437 442 9.590451 AAATTACTTTTTGTCATGAGGCATATG 57.410 29.630 0.00 0.00 0.00 1.78
438 443 7.701539 TTACTTTTTGTCATGAGGCATATGT 57.298 32.000 4.29 0.00 0.00 2.29
439 444 8.800370 TTACTTTTTGTCATGAGGCATATGTA 57.200 30.769 4.29 0.00 0.00 2.29
440 445 7.886629 ACTTTTTGTCATGAGGCATATGTAT 57.113 32.000 4.29 0.00 0.00 2.29
441 446 7.934457 ACTTTTTGTCATGAGGCATATGTATC 58.066 34.615 4.29 3.65 0.00 2.24
442 447 6.882610 TTTTGTCATGAGGCATATGTATCC 57.117 37.500 4.29 0.00 0.00 2.59
443 448 5.565455 TTGTCATGAGGCATATGTATCCA 57.435 39.130 4.29 0.00 0.00 3.41
444 449 5.767277 TGTCATGAGGCATATGTATCCAT 57.233 39.130 4.29 1.04 34.97 3.41
445 450 6.872585 TGTCATGAGGCATATGTATCCATA 57.127 37.500 4.29 0.00 37.92 2.74
446 451 7.441903 TGTCATGAGGCATATGTATCCATAT 57.558 36.000 4.29 0.00 43.54 1.78
457 462 4.451891 TGTATCCATATGCCACCATTGT 57.548 40.909 0.00 0.00 32.85 2.71
458 463 5.574970 TGTATCCATATGCCACCATTGTA 57.425 39.130 0.00 0.00 32.85 2.41
459 464 5.312895 TGTATCCATATGCCACCATTGTAC 58.687 41.667 0.00 0.00 32.85 2.90
460 465 2.844946 TCCATATGCCACCATTGTACG 58.155 47.619 0.00 0.00 32.85 3.67
461 466 2.171659 TCCATATGCCACCATTGTACGT 59.828 45.455 0.00 0.00 32.85 3.57
462 467 2.290367 CCATATGCCACCATTGTACGTG 59.710 50.000 0.00 0.00 32.85 4.49
463 468 1.374560 TATGCCACCATTGTACGTGC 58.625 50.000 0.00 0.00 32.85 5.34
464 469 1.312371 ATGCCACCATTGTACGTGCC 61.312 55.000 0.00 0.00 0.00 5.01
539 544 4.844420 GCTGCTAGCACCACCTAG 57.156 61.111 14.93 3.13 41.89 3.02
540 545 1.901085 GCTGCTAGCACCACCTAGT 59.099 57.895 14.93 0.00 41.89 2.57
541 546 0.460987 GCTGCTAGCACCACCTAGTG 60.461 60.000 14.93 1.50 41.89 2.74
563 568 1.365633 GTGCAGCCTATCTCTCCCG 59.634 63.158 0.00 0.00 0.00 5.14
664 931 1.194781 TTCCAGGAGCTCTGTGTCCC 61.195 60.000 14.64 0.00 41.83 4.46
671 938 3.402681 CTCTGTGTCCCCCGCCAT 61.403 66.667 0.00 0.00 0.00 4.40
782 1075 6.591935 TGAAATATCAATAAGCCCTCTCGTT 58.408 36.000 0.00 0.00 30.99 3.85
785 1078 7.881775 AATATCAATAAGCCCTCTCGTTTTT 57.118 32.000 0.00 0.00 0.00 1.94
807 1100 6.737254 TTTTTAGACAAATAAGCCCTCTCG 57.263 37.500 0.00 0.00 0.00 4.04
808 1101 5.416271 TTTAGACAAATAAGCCCTCTCGT 57.584 39.130 0.00 0.00 0.00 4.18
809 1102 3.252974 AGACAAATAAGCCCTCTCGTG 57.747 47.619 0.00 0.00 0.00 4.35
810 1103 2.567615 AGACAAATAAGCCCTCTCGTGT 59.432 45.455 0.00 0.00 0.00 4.49
811 1104 3.008049 AGACAAATAAGCCCTCTCGTGTT 59.992 43.478 0.00 0.00 0.00 3.32
812 1105 4.222145 AGACAAATAAGCCCTCTCGTGTTA 59.778 41.667 0.00 0.00 0.00 2.41
813 1106 4.504858 ACAAATAAGCCCTCTCGTGTTAG 58.495 43.478 0.00 0.00 0.00 2.34
814 1107 3.821421 AATAAGCCCTCTCGTGTTAGG 57.179 47.619 0.00 0.00 0.00 2.69
815 1108 0.822164 TAAGCCCTCTCGTGTTAGGC 59.178 55.000 6.96 6.96 44.20 3.93
816 1109 1.900545 AAGCCCTCTCGTGTTAGGCC 61.901 60.000 0.00 0.00 45.00 5.19
817 1110 2.359967 GCCCTCTCGTGTTAGGCCT 61.360 63.158 11.78 11.78 37.66 5.19
898 1194 1.139520 GCAAGCCAATAAGCCCACG 59.860 57.895 0.00 0.00 0.00 4.94
900 1196 0.734889 CAAGCCAATAAGCCCACGAG 59.265 55.000 0.00 0.00 0.00 4.18
924 1220 1.477700 GAAGCCCAATACATGCAGCAA 59.522 47.619 0.00 0.00 31.24 3.91
939 1235 0.039035 AGCAAACCCAAGCCCGAATA 59.961 50.000 0.00 0.00 0.00 1.75
1060 1364 1.609210 TCGGCATCTCCACCTGACA 60.609 57.895 0.00 0.00 34.01 3.58
1064 1368 1.975327 CATCTCCACCTGACACCGT 59.025 57.895 0.00 0.00 0.00 4.83
1227 1531 0.798776 GATCCAGCAACACCAACTCG 59.201 55.000 0.00 0.00 0.00 4.18
1287 1591 3.312828 CGCATCAAGATACTACTCAGCC 58.687 50.000 0.00 0.00 0.00 4.85
1461 1773 4.494091 CCTAATTCTCAGGGAGCTTTGA 57.506 45.455 0.00 0.00 0.00 2.69
1472 1784 3.265479 AGGGAGCTTTGATTTGCTAGAGT 59.735 43.478 0.00 0.00 39.91 3.24
1495 1807 2.535984 CTGATCGCGACCTACATTGTTC 59.464 50.000 12.93 0.68 0.00 3.18
1497 1809 2.273370 TCGCGACCTACATTGTTCTC 57.727 50.000 3.71 0.00 0.00 2.87
1503 1815 4.213482 GCGACCTACATTGTTCTCTTTTGT 59.787 41.667 0.00 0.00 0.00 2.83
1504 1816 5.277828 GCGACCTACATTGTTCTCTTTTGTT 60.278 40.000 0.00 0.00 0.00 2.83
1505 1817 6.725246 CGACCTACATTGTTCTCTTTTGTTT 58.275 36.000 0.00 0.00 0.00 2.83
1506 1818 7.519328 GCGACCTACATTGTTCTCTTTTGTTTA 60.519 37.037 0.00 0.00 0.00 2.01
1518 1830 5.600484 TCTCTTTTGTTTATTTGGGGCAGAA 59.400 36.000 0.00 0.00 0.00 3.02
1609 2128 3.807071 GCTCTACTCTGCTTGATTTAGCC 59.193 47.826 0.00 0.00 40.49 3.93
1627 2160 6.814954 TTAGCCTCTGTCAATATTTCCTCT 57.185 37.500 0.00 0.00 0.00 3.69
1768 2688 8.413229 AGTGACAACTACTTTATTTGTGCAAAT 58.587 29.630 13.68 13.68 38.53 2.32
1834 2754 2.058125 TAACAGAACAAGGCCGCCCA 62.058 55.000 5.55 0.00 0.00 5.36
1835 2755 2.597217 CAGAACAAGGCCGCCCAA 60.597 61.111 5.55 0.00 0.00 4.12
1837 2757 1.903404 AGAACAAGGCCGCCCAAAG 60.903 57.895 5.55 0.00 0.00 2.77
1859 2779 2.486592 CCCCAAACTAAAACAGTAGGCG 59.513 50.000 0.00 0.00 36.04 5.52
1865 2805 3.207778 ACTAAAACAGTAGGCGTTTGCA 58.792 40.909 0.00 0.00 38.27 4.08
1913 2885 9.837681 TTAGGGTAATATGATGGAGATGTTCTA 57.162 33.333 0.00 0.00 0.00 2.10
1963 2935 8.086522 GCAATCTTCATGCAATCCACTAATTAT 58.913 33.333 0.00 0.00 43.29 1.28
1982 2954 5.932619 TTATCTCTGTCCGGAATTTCTCA 57.067 39.130 5.23 0.00 0.00 3.27
2089 3068 6.974932 AGAGCAATACTAGAAATGTGTGTG 57.025 37.500 0.00 0.00 0.00 3.82
2205 3184 4.096532 CAGATCTAGACGTTTGCTACTCCA 59.903 45.833 0.00 0.00 0.00 3.86
2296 3275 0.107848 GATGTGTACCCAAGGACCCG 60.108 60.000 0.00 0.00 0.00 5.28
2736 3750 7.651027 ACTGAATTATCCCCTGATTCAAAAG 57.349 36.000 0.00 0.00 38.82 2.27
2772 3786 4.097892 GGTTGGTCGCTGATGGATTAATTT 59.902 41.667 0.00 0.00 0.00 1.82
2820 3853 3.949113 GTCTTGTAGGTACTAGAGCTGCT 59.051 47.826 0.00 0.00 44.14 4.24
2880 3913 4.339530 GGATCTTAATTTCTGGCCTTGGTC 59.660 45.833 3.32 0.00 0.00 4.02
2957 3990 3.323115 GGATGCATGTGACCTATCTGAGA 59.677 47.826 2.46 0.00 0.00 3.27
2966 4000 6.401394 TGTGACCTATCTGAGAATGTTCTTG 58.599 40.000 0.00 0.00 37.73 3.02
2975 4009 8.641498 ATCTGAGAATGTTCTTGTTTGGTAAT 57.359 30.769 0.00 0.00 37.73 1.89
3033 4070 1.335506 GGAGAAGAGGATCGACGATGC 60.336 57.143 20.34 20.34 42.67 3.91
3091 4135 7.596749 GCTACATGCTACTACTTCTTTTTCA 57.403 36.000 0.00 0.00 38.95 2.69
3092 4136 7.680062 GCTACATGCTACTACTTCTTTTTCAG 58.320 38.462 0.00 0.00 38.95 3.02
3093 4137 6.487689 ACATGCTACTACTTCTTTTTCAGC 57.512 37.500 0.00 0.00 0.00 4.26
3094 4138 6.234177 ACATGCTACTACTTCTTTTTCAGCT 58.766 36.000 0.00 0.00 0.00 4.24
3095 4139 7.386851 ACATGCTACTACTTCTTTTTCAGCTA 58.613 34.615 0.00 0.00 0.00 3.32
3096 4140 7.332182 ACATGCTACTACTTCTTTTTCAGCTAC 59.668 37.037 0.00 0.00 0.00 3.58
3097 4141 6.994221 TGCTACTACTTCTTTTTCAGCTACT 58.006 36.000 0.00 0.00 0.00 2.57
3098 4142 8.118976 TGCTACTACTTCTTTTTCAGCTACTA 57.881 34.615 0.00 0.00 0.00 1.82
3099 4143 8.027771 TGCTACTACTTCTTTTTCAGCTACTAC 58.972 37.037 0.00 0.00 0.00 2.73
3100 4144 8.245491 GCTACTACTTCTTTTTCAGCTACTACT 58.755 37.037 0.00 0.00 0.00 2.57
3101 4145 9.777575 CTACTACTTCTTTTTCAGCTACTACTC 57.222 37.037 0.00 0.00 0.00 2.59
3102 4146 7.604549 ACTACTTCTTTTTCAGCTACTACTCC 58.395 38.462 0.00 0.00 0.00 3.85
3103 4147 5.795972 ACTTCTTTTTCAGCTACTACTCCC 58.204 41.667 0.00 0.00 0.00 4.30
3104 4148 5.544562 ACTTCTTTTTCAGCTACTACTCCCT 59.455 40.000 0.00 0.00 0.00 4.20
3105 4149 5.662674 TCTTTTTCAGCTACTACTCCCTC 57.337 43.478 0.00 0.00 0.00 4.30
3106 4150 4.466726 TCTTTTTCAGCTACTACTCCCTCC 59.533 45.833 0.00 0.00 0.00 4.30
3107 4151 2.054232 TTCAGCTACTACTCCCTCCG 57.946 55.000 0.00 0.00 0.00 4.63
3108 4152 0.917533 TCAGCTACTACTCCCTCCGT 59.082 55.000 0.00 0.00 0.00 4.69
3109 4153 1.284198 TCAGCTACTACTCCCTCCGTT 59.716 52.381 0.00 0.00 0.00 4.44
3110 4154 1.677052 CAGCTACTACTCCCTCCGTTC 59.323 57.143 0.00 0.00 0.00 3.95
3111 4155 1.565288 AGCTACTACTCCCTCCGTTCT 59.435 52.381 0.00 0.00 0.00 3.01
3112 4156 2.776536 AGCTACTACTCCCTCCGTTCTA 59.223 50.000 0.00 0.00 0.00 2.10
3113 4157 3.201708 AGCTACTACTCCCTCCGTTCTAA 59.798 47.826 0.00 0.00 0.00 2.10
3114 4158 3.950395 GCTACTACTCCCTCCGTTCTAAA 59.050 47.826 0.00 0.00 0.00 1.85
3115 4159 4.400567 GCTACTACTCCCTCCGTTCTAAAA 59.599 45.833 0.00 0.00 0.00 1.52
3116 4160 5.068855 GCTACTACTCCCTCCGTTCTAAAAT 59.931 44.000 0.00 0.00 0.00 1.82
3117 4161 6.264067 GCTACTACTCCCTCCGTTCTAAAATA 59.736 42.308 0.00 0.00 0.00 1.40
3118 4162 6.712179 ACTACTCCCTCCGTTCTAAAATAG 57.288 41.667 0.00 0.00 0.00 1.73
3119 4163 6.430007 ACTACTCCCTCCGTTCTAAAATAGA 58.570 40.000 0.00 0.00 0.00 1.98
3120 4164 7.068061 ACTACTCCCTCCGTTCTAAAATAGAT 58.932 38.462 0.00 0.00 34.22 1.98
3121 4165 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
3122 4166 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
3123 4167 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
3124 4168 5.897824 TCCCTCCGTTCTAAAATAGATGACT 59.102 40.000 0.00 0.00 34.22 3.41
3125 4169 6.040616 TCCCTCCGTTCTAAAATAGATGACTC 59.959 42.308 0.00 0.00 34.22 3.36
3126 4170 6.183360 CCCTCCGTTCTAAAATAGATGACTCA 60.183 42.308 0.00 0.00 34.22 3.41
3127 4171 7.265673 CCTCCGTTCTAAAATAGATGACTCAA 58.734 38.462 0.00 0.00 34.22 3.02
3128 4172 7.222999 CCTCCGTTCTAAAATAGATGACTCAAC 59.777 40.741 0.00 0.00 34.22 3.18
3129 4173 7.837863 TCCGTTCTAAAATAGATGACTCAACT 58.162 34.615 0.00 0.00 34.22 3.16
3130 4174 8.311836 TCCGTTCTAAAATAGATGACTCAACTT 58.688 33.333 0.00 0.00 34.22 2.66
3131 4175 8.936864 CCGTTCTAAAATAGATGACTCAACTTT 58.063 33.333 0.00 0.00 34.22 2.66
3132 4176 9.746711 CGTTCTAAAATAGATGACTCAACTTTG 57.253 33.333 0.00 0.00 34.22 2.77
3139 4183 8.934507 AATAGATGACTCAACTTTGTACTAGC 57.065 34.615 0.00 0.00 0.00 3.42
3140 4184 6.597832 AGATGACTCAACTTTGTACTAGCT 57.402 37.500 0.00 0.00 0.00 3.32
3141 4185 6.998802 AGATGACTCAACTTTGTACTAGCTT 58.001 36.000 0.00 0.00 0.00 3.74
3142 4186 6.870965 AGATGACTCAACTTTGTACTAGCTTG 59.129 38.462 0.00 0.00 0.00 4.01
3143 4187 5.297547 TGACTCAACTTTGTACTAGCTTGG 58.702 41.667 0.00 0.00 0.00 3.61
3144 4188 5.069914 TGACTCAACTTTGTACTAGCTTGGA 59.930 40.000 0.00 0.00 0.00 3.53
3145 4189 5.925509 ACTCAACTTTGTACTAGCTTGGAA 58.074 37.500 0.00 0.00 0.00 3.53
3146 4190 5.758784 ACTCAACTTTGTACTAGCTTGGAAC 59.241 40.000 0.00 0.00 0.00 3.62
3147 4191 4.748102 TCAACTTTGTACTAGCTTGGAACG 59.252 41.667 0.00 0.00 0.00 3.95
3148 4192 3.660865 ACTTTGTACTAGCTTGGAACGG 58.339 45.455 0.00 0.00 0.00 4.44
3149 4193 3.322828 ACTTTGTACTAGCTTGGAACGGA 59.677 43.478 0.00 0.00 0.00 4.69
3150 4194 3.587797 TTGTACTAGCTTGGAACGGAG 57.412 47.619 0.00 0.00 0.00 4.63
3151 4195 1.822990 TGTACTAGCTTGGAACGGAGG 59.177 52.381 0.00 0.00 0.00 4.30
3152 4196 1.136500 GTACTAGCTTGGAACGGAGGG 59.864 57.143 0.00 0.00 0.00 4.30
3153 4197 0.252103 ACTAGCTTGGAACGGAGGGA 60.252 55.000 0.00 0.00 0.00 4.20
3154 4198 0.461961 CTAGCTTGGAACGGAGGGAG 59.538 60.000 0.00 0.00 0.00 4.30
3155 4199 0.252103 TAGCTTGGAACGGAGGGAGT 60.252 55.000 0.00 0.00 0.00 3.85
3156 4200 0.252103 AGCTTGGAACGGAGGGAGTA 60.252 55.000 0.00 0.00 0.00 2.59
3209 4253 5.731591 TGAATATATGAGAGCCAGCATGAG 58.268 41.667 0.00 0.00 39.69 2.90
3227 4271 6.726258 CATGAGTGCTTGATGTGTAAGTAA 57.274 37.500 0.00 0.00 0.00 2.24
3228 4272 6.537566 CATGAGTGCTTGATGTGTAAGTAAC 58.462 40.000 0.00 0.00 0.00 2.50
3229 4273 4.994852 TGAGTGCTTGATGTGTAAGTAACC 59.005 41.667 0.00 0.00 0.00 2.85
3260 4304 9.093970 TGTAAGTAACCGAATCTGATTATGTTG 57.906 33.333 19.34 5.44 0.00 3.33
3265 4309 5.245531 ACCGAATCTGATTATGTTGTGTGT 58.754 37.500 2.28 0.00 0.00 3.72
3283 4327 4.684242 GTGTGTGTGACAATCGATTCACTA 59.316 41.667 23.77 14.11 42.31 2.74
3286 4330 4.688879 TGTGTGACAATCGATTCACTAACC 59.311 41.667 23.77 13.39 42.31 2.85
3288 4332 4.688879 TGTGACAATCGATTCACTAACCAC 59.311 41.667 23.77 16.03 42.31 4.16
3458 4516 4.459089 GCAGGGAGTCAGGGACGC 62.459 72.222 0.00 0.00 37.67 5.19
3471 4529 4.409218 GACGCGCACTCGTACCCA 62.409 66.667 5.73 0.00 43.42 4.51
3472 4530 4.712425 ACGCGCACTCGTACCCAC 62.712 66.667 5.73 0.00 41.36 4.61
3473 4531 4.710695 CGCGCACTCGTACCCACA 62.711 66.667 8.75 0.00 38.14 4.17
3477 4535 0.938713 CGCACTCGTACCCACAAAAA 59.061 50.000 0.00 0.00 0.00 1.94
3516 4579 2.232756 ATGTCCCGGCAAAACAAAAC 57.767 45.000 0.00 0.00 0.00 2.43
3520 4583 2.350192 GTCCCGGCAAAACAAAACAAAG 59.650 45.455 0.00 0.00 0.00 2.77
3546 4609 1.816863 TTCTGGACAGTGGGACTCGC 61.817 60.000 0.00 0.00 0.00 5.03
3551 4614 1.594331 GACAGTGGGACTCGCTTTTT 58.406 50.000 0.00 0.00 33.21 1.94
3576 4639 0.804364 TGATCAACAGGCATTCGTGC 59.196 50.000 0.00 0.00 0.00 5.34
3581 4644 3.725459 CAGGCATTCGTGCGTGCA 61.725 61.111 9.70 0.00 42.42 4.57
3594 4657 2.037136 CGTGCAGCCTTCCTTCCTG 61.037 63.158 0.00 0.00 0.00 3.86
3599 4662 2.124942 GCCTTCCTTCCTGCTCCG 60.125 66.667 0.00 0.00 0.00 4.63
3603 4666 0.671781 CTTCCTTCCTGCTCCGTGTG 60.672 60.000 0.00 0.00 0.00 3.82
3616 4679 1.157870 CCGTGTGAACAGAAGGCGTT 61.158 55.000 0.00 0.00 0.00 4.84
3618 4681 1.594518 CGTGTGAACAGAAGGCGTTTG 60.595 52.381 0.00 0.00 0.00 2.93
3644 4714 1.001974 TGCTGCAGAACACTAACCGAT 59.998 47.619 20.43 0.00 0.00 4.18
3663 4733 1.601197 CGAGGGGAGATCCGATCGT 60.601 63.158 15.09 0.00 39.26 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 134 1.338960 TGCCTTGCTGAATCGACATGA 60.339 47.619 0.00 0.00 0.00 3.07
147 152 2.880268 TGAGGCTATGCATTGTACATGC 59.120 45.455 3.54 17.91 44.76 4.06
148 153 4.023450 CCTTGAGGCTATGCATTGTACATG 60.023 45.833 3.54 7.24 0.00 3.21
149 154 4.139786 CCTTGAGGCTATGCATTGTACAT 58.860 43.478 3.54 0.00 0.00 2.29
150 155 3.054434 ACCTTGAGGCTATGCATTGTACA 60.054 43.478 3.54 2.41 39.32 2.90
151 156 3.313526 CACCTTGAGGCTATGCATTGTAC 59.686 47.826 3.54 0.42 39.32 2.90
152 157 3.199727 TCACCTTGAGGCTATGCATTGTA 59.800 43.478 3.54 0.00 39.32 2.41
153 158 2.025981 TCACCTTGAGGCTATGCATTGT 60.026 45.455 3.54 0.00 39.32 2.71
154 159 2.646930 TCACCTTGAGGCTATGCATTG 58.353 47.619 3.54 3.55 39.32 2.82
155 160 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
156 161 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
157 162 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
176 181 2.256591 CCTACATGGCATGCGAGGC 61.257 63.158 26.96 0.00 32.09 4.70
177 182 0.035881 ATCCTACATGGCATGCGAGG 59.964 55.000 30.04 30.04 37.80 4.63
178 183 1.436600 GATCCTACATGGCATGCGAG 58.563 55.000 26.70 22.01 35.26 5.03
179 184 0.319813 CGATCCTACATGGCATGCGA 60.320 55.000 26.70 19.03 35.26 5.10
180 185 1.293963 CCGATCCTACATGGCATGCG 61.294 60.000 26.70 19.33 35.26 4.73
181 186 0.035317 TCCGATCCTACATGGCATGC 59.965 55.000 26.70 9.90 35.26 4.06
182 187 2.775911 ATCCGATCCTACATGGCATG 57.224 50.000 25.31 25.31 35.26 4.06
183 188 4.033009 TCATATCCGATCCTACATGGCAT 58.967 43.478 0.00 0.00 35.26 4.40
184 189 3.195610 GTCATATCCGATCCTACATGGCA 59.804 47.826 0.00 0.00 35.26 4.92
185 190 3.735208 CGTCATATCCGATCCTACATGGC 60.735 52.174 0.00 0.00 35.26 4.40
186 191 3.444034 ACGTCATATCCGATCCTACATGG 59.556 47.826 0.00 0.00 37.10 3.66
187 192 4.703645 ACGTCATATCCGATCCTACATG 57.296 45.455 0.00 0.00 0.00 3.21
188 193 6.433404 ACTTTACGTCATATCCGATCCTACAT 59.567 38.462 0.00 0.00 0.00 2.29
189 194 5.766670 ACTTTACGTCATATCCGATCCTACA 59.233 40.000 0.00 0.00 0.00 2.74
190 195 6.251655 ACTTTACGTCATATCCGATCCTAC 57.748 41.667 0.00 0.00 0.00 3.18
191 196 6.596888 CCTACTTTACGTCATATCCGATCCTA 59.403 42.308 0.00 0.00 0.00 2.94
192 197 5.415077 CCTACTTTACGTCATATCCGATCCT 59.585 44.000 0.00 0.00 0.00 3.24
193 198 5.182760 ACCTACTTTACGTCATATCCGATCC 59.817 44.000 0.00 0.00 0.00 3.36
194 199 6.251655 ACCTACTTTACGTCATATCCGATC 57.748 41.667 0.00 0.00 0.00 3.69
195 200 6.567321 CGAACCTACTTTACGTCATATCCGAT 60.567 42.308 0.00 0.00 0.00 4.18
196 201 5.277490 CGAACCTACTTTACGTCATATCCGA 60.277 44.000 0.00 0.00 0.00 4.55
197 202 4.908156 CGAACCTACTTTACGTCATATCCG 59.092 45.833 0.00 0.00 0.00 4.18
198 203 5.009010 TCCGAACCTACTTTACGTCATATCC 59.991 44.000 0.00 0.00 0.00 2.59
199 204 6.064846 TCCGAACCTACTTTACGTCATATC 57.935 41.667 0.00 0.00 0.00 1.63
200 205 6.645790 ATCCGAACCTACTTTACGTCATAT 57.354 37.500 0.00 0.00 0.00 1.78
201 206 6.205464 CCTATCCGAACCTACTTTACGTCATA 59.795 42.308 0.00 0.00 0.00 2.15
202 207 4.996788 ATCCGAACCTACTTTACGTCAT 57.003 40.909 0.00 0.00 0.00 3.06
203 208 4.336433 CCTATCCGAACCTACTTTACGTCA 59.664 45.833 0.00 0.00 0.00 4.35
204 209 4.261363 CCCTATCCGAACCTACTTTACGTC 60.261 50.000 0.00 0.00 0.00 4.34
205 210 3.633986 CCCTATCCGAACCTACTTTACGT 59.366 47.826 0.00 0.00 0.00 3.57
206 211 3.885297 TCCCTATCCGAACCTACTTTACG 59.115 47.826 0.00 0.00 0.00 3.18
207 212 5.738495 GCTTCCCTATCCGAACCTACTTTAC 60.738 48.000 0.00 0.00 0.00 2.01
208 213 4.343239 GCTTCCCTATCCGAACCTACTTTA 59.657 45.833 0.00 0.00 0.00 1.85
209 214 3.134262 GCTTCCCTATCCGAACCTACTTT 59.866 47.826 0.00 0.00 0.00 2.66
210 215 2.699321 GCTTCCCTATCCGAACCTACTT 59.301 50.000 0.00 0.00 0.00 2.24
211 216 2.317973 GCTTCCCTATCCGAACCTACT 58.682 52.381 0.00 0.00 0.00 2.57
212 217 1.000496 CGCTTCCCTATCCGAACCTAC 60.000 57.143 0.00 0.00 0.00 3.18
213 218 1.325355 CGCTTCCCTATCCGAACCTA 58.675 55.000 0.00 0.00 0.00 3.08
214 219 1.400530 CCGCTTCCCTATCCGAACCT 61.401 60.000 0.00 0.00 0.00 3.50
215 220 1.069258 CCGCTTCCCTATCCGAACC 59.931 63.158 0.00 0.00 0.00 3.62
216 221 1.069258 CCCGCTTCCCTATCCGAAC 59.931 63.158 0.00 0.00 0.00 3.95
217 222 0.471211 ATCCCGCTTCCCTATCCGAA 60.471 55.000 0.00 0.00 0.00 4.30
218 223 0.898789 GATCCCGCTTCCCTATCCGA 60.899 60.000 0.00 0.00 0.00 4.55
219 224 1.592223 GATCCCGCTTCCCTATCCG 59.408 63.158 0.00 0.00 0.00 4.18
220 225 0.545548 AGGATCCCGCTTCCCTATCC 60.546 60.000 8.55 0.00 37.05 2.59
221 226 0.899019 GAGGATCCCGCTTCCCTATC 59.101 60.000 8.55 0.00 33.45 2.08
222 227 0.489567 AGAGGATCCCGCTTCCCTAT 59.510 55.000 8.55 0.00 33.66 2.57
223 228 0.178958 GAGAGGATCCCGCTTCCCTA 60.179 60.000 8.55 0.00 32.83 3.53
224 229 1.458588 GAGAGGATCCCGCTTCCCT 60.459 63.158 8.55 0.00 32.83 4.20
225 230 2.512355 GGAGAGGATCCCGCTTCCC 61.512 68.421 8.55 1.29 43.01 3.97
226 231 3.143338 GGAGAGGATCCCGCTTCC 58.857 66.667 8.55 6.90 43.01 3.46
238 243 3.465403 CACCCGCCTCCTGGAGAG 61.465 72.222 25.18 17.02 42.83 3.20
243 248 3.551496 TTCAAGCACCCGCCTCCTG 62.551 63.158 0.00 0.00 39.83 3.86
244 249 3.249189 TTCAAGCACCCGCCTCCT 61.249 61.111 0.00 0.00 39.83 3.69
245 250 2.747855 CTTCAAGCACCCGCCTCC 60.748 66.667 0.00 0.00 39.83 4.30
246 251 1.743252 CTCTTCAAGCACCCGCCTC 60.743 63.158 0.00 0.00 39.83 4.70
247 252 1.768684 TTCTCTTCAAGCACCCGCCT 61.769 55.000 0.00 0.00 39.83 5.52
248 253 0.889186 TTTCTCTTCAAGCACCCGCC 60.889 55.000 0.00 0.00 39.83 6.13
249 254 0.951558 TTTTCTCTTCAAGCACCCGC 59.048 50.000 0.00 0.00 38.99 6.13
250 255 2.618709 ACTTTTTCTCTTCAAGCACCCG 59.381 45.455 0.00 0.00 0.00 5.28
251 256 5.335976 CCATACTTTTTCTCTTCAAGCACCC 60.336 44.000 0.00 0.00 0.00 4.61
252 257 5.241728 ACCATACTTTTTCTCTTCAAGCACC 59.758 40.000 0.00 0.00 0.00 5.01
253 258 6.319141 ACCATACTTTTTCTCTTCAAGCAC 57.681 37.500 0.00 0.00 0.00 4.40
254 259 5.473504 GGACCATACTTTTTCTCTTCAAGCA 59.526 40.000 0.00 0.00 0.00 3.91
255 260 5.390991 CGGACCATACTTTTTCTCTTCAAGC 60.391 44.000 0.00 0.00 0.00 4.01
256 261 5.122396 CCGGACCATACTTTTTCTCTTCAAG 59.878 44.000 0.00 0.00 0.00 3.02
257 262 5.001232 CCGGACCATACTTTTTCTCTTCAA 58.999 41.667 0.00 0.00 0.00 2.69
258 263 4.041198 ACCGGACCATACTTTTTCTCTTCA 59.959 41.667 9.46 0.00 0.00 3.02
259 264 4.392138 CACCGGACCATACTTTTTCTCTTC 59.608 45.833 9.46 0.00 0.00 2.87
260 265 4.041198 TCACCGGACCATACTTTTTCTCTT 59.959 41.667 9.46 0.00 0.00 2.85
261 266 3.581332 TCACCGGACCATACTTTTTCTCT 59.419 43.478 9.46 0.00 0.00 3.10
262 267 3.683340 GTCACCGGACCATACTTTTTCTC 59.317 47.826 9.46 0.00 38.12 2.87
263 268 3.071892 TGTCACCGGACCATACTTTTTCT 59.928 43.478 9.46 0.00 43.65 2.52
264 269 3.404899 TGTCACCGGACCATACTTTTTC 58.595 45.455 9.46 0.00 43.65 2.29
265 270 3.495434 TGTCACCGGACCATACTTTTT 57.505 42.857 9.46 0.00 43.65 1.94
266 271 3.495434 TTGTCACCGGACCATACTTTT 57.505 42.857 9.46 0.00 43.65 2.27
267 272 3.495434 TTTGTCACCGGACCATACTTT 57.505 42.857 9.46 0.00 43.65 2.66
268 273 3.408634 CTTTTGTCACCGGACCATACTT 58.591 45.455 9.46 0.00 43.65 2.24
269 274 2.874457 GCTTTTGTCACCGGACCATACT 60.874 50.000 9.46 0.00 43.65 2.12
270 275 1.467342 GCTTTTGTCACCGGACCATAC 59.533 52.381 9.46 0.00 43.65 2.39
271 276 1.349688 AGCTTTTGTCACCGGACCATA 59.650 47.619 9.46 0.00 43.65 2.74
272 277 0.110486 AGCTTTTGTCACCGGACCAT 59.890 50.000 9.46 0.00 43.65 3.55
273 278 0.759959 TAGCTTTTGTCACCGGACCA 59.240 50.000 9.46 0.00 43.65 4.02
274 279 1.886886 TTAGCTTTTGTCACCGGACC 58.113 50.000 9.46 0.00 43.65 4.46
275 280 3.974871 TTTTAGCTTTTGTCACCGGAC 57.025 42.857 9.46 0.00 44.57 4.79
276 281 3.316868 CCTTTTTAGCTTTTGTCACCGGA 59.683 43.478 9.46 0.00 0.00 5.14
277 282 3.067601 ACCTTTTTAGCTTTTGTCACCGG 59.932 43.478 0.00 0.00 0.00 5.28
278 283 4.301637 ACCTTTTTAGCTTTTGTCACCG 57.698 40.909 0.00 0.00 0.00 4.94
279 284 5.656480 TCAACCTTTTTAGCTTTTGTCACC 58.344 37.500 0.00 0.00 0.00 4.02
280 285 6.811665 ACTTCAACCTTTTTAGCTTTTGTCAC 59.188 34.615 0.00 0.00 0.00 3.67
281 286 6.811170 CACTTCAACCTTTTTAGCTTTTGTCA 59.189 34.615 0.00 0.00 0.00 3.58
282 287 7.033185 TCACTTCAACCTTTTTAGCTTTTGTC 58.967 34.615 0.00 0.00 0.00 3.18
283 288 6.930731 TCACTTCAACCTTTTTAGCTTTTGT 58.069 32.000 0.00 0.00 0.00 2.83
284 289 7.826260 TTCACTTCAACCTTTTTAGCTTTTG 57.174 32.000 0.00 0.00 0.00 2.44
285 290 8.840833 TTTTCACTTCAACCTTTTTAGCTTTT 57.159 26.923 0.00 0.00 0.00 2.27
286 291 8.094548 ACTTTTCACTTCAACCTTTTTAGCTTT 58.905 29.630 0.00 0.00 0.00 3.51
287 292 7.611770 ACTTTTCACTTCAACCTTTTTAGCTT 58.388 30.769 0.00 0.00 0.00 3.74
288 293 7.170393 ACTTTTCACTTCAACCTTTTTAGCT 57.830 32.000 0.00 0.00 0.00 3.32
289 294 8.403236 TCTACTTTTCACTTCAACCTTTTTAGC 58.597 33.333 0.00 0.00 0.00 3.09
290 295 9.937175 CTCTACTTTTCACTTCAACCTTTTTAG 57.063 33.333 0.00 0.00 0.00 1.85
291 296 9.675464 TCTCTACTTTTCACTTCAACCTTTTTA 57.325 29.630 0.00 0.00 0.00 1.52
292 297 8.575649 TCTCTACTTTTCACTTCAACCTTTTT 57.424 30.769 0.00 0.00 0.00 1.94
293 298 8.624776 CATCTCTACTTTTCACTTCAACCTTTT 58.375 33.333 0.00 0.00 0.00 2.27
294 299 7.255277 GCATCTCTACTTTTCACTTCAACCTTT 60.255 37.037 0.00 0.00 0.00 3.11
295 300 6.205658 GCATCTCTACTTTTCACTTCAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
296 301 5.703130 GCATCTCTACTTTTCACTTCAACCT 59.297 40.000 0.00 0.00 0.00 3.50
297 302 5.470098 TGCATCTCTACTTTTCACTTCAACC 59.530 40.000 0.00 0.00 0.00 3.77
298 303 6.545504 TGCATCTCTACTTTTCACTTCAAC 57.454 37.500 0.00 0.00 0.00 3.18
299 304 6.712095 ACATGCATCTCTACTTTTCACTTCAA 59.288 34.615 0.00 0.00 0.00 2.69
300 305 6.148315 CACATGCATCTCTACTTTTCACTTCA 59.852 38.462 0.00 0.00 0.00 3.02
301 306 6.148480 ACACATGCATCTCTACTTTTCACTTC 59.852 38.462 0.00 0.00 0.00 3.01
302 307 6.000219 ACACATGCATCTCTACTTTTCACTT 59.000 36.000 0.00 0.00 0.00 3.16
303 308 5.555017 ACACATGCATCTCTACTTTTCACT 58.445 37.500 0.00 0.00 0.00 3.41
304 309 5.869753 ACACATGCATCTCTACTTTTCAC 57.130 39.130 0.00 0.00 0.00 3.18
305 310 6.701340 AGTACACATGCATCTCTACTTTTCA 58.299 36.000 0.00 0.00 0.00 2.69
306 311 8.191446 TCTAGTACACATGCATCTCTACTTTTC 58.809 37.037 0.00 0.00 0.00 2.29
307 312 8.067751 TCTAGTACACATGCATCTCTACTTTT 57.932 34.615 0.00 0.00 0.00 2.27
308 313 7.340743 ACTCTAGTACACATGCATCTCTACTTT 59.659 37.037 0.00 0.00 0.00 2.66
309 314 6.831353 ACTCTAGTACACATGCATCTCTACTT 59.169 38.462 0.00 0.00 0.00 2.24
310 315 6.361433 ACTCTAGTACACATGCATCTCTACT 58.639 40.000 0.00 4.19 0.00 2.57
311 316 6.485313 AGACTCTAGTACACATGCATCTCTAC 59.515 42.308 0.00 0.00 0.00 2.59
312 317 6.596621 AGACTCTAGTACACATGCATCTCTA 58.403 40.000 0.00 0.00 0.00 2.43
313 318 5.445069 AGACTCTAGTACACATGCATCTCT 58.555 41.667 0.00 0.00 0.00 3.10
314 319 5.766150 AGACTCTAGTACACATGCATCTC 57.234 43.478 0.00 0.00 0.00 2.75
315 320 6.537453 AAAGACTCTAGTACACATGCATCT 57.463 37.500 0.00 0.00 0.00 2.90
316 321 8.879342 AATAAAGACTCTAGTACACATGCATC 57.121 34.615 0.00 0.00 0.00 3.91
317 322 9.672673 AAAATAAAGACTCTAGTACACATGCAT 57.327 29.630 0.00 0.00 0.00 3.96
318 323 9.151471 GAAAATAAAGACTCTAGTACACATGCA 57.849 33.333 0.00 0.00 0.00 3.96
319 324 9.372369 AGAAAATAAAGACTCTAGTACACATGC 57.628 33.333 0.00 0.00 0.00 4.06
340 345 9.807921 AGTGGACCTCATTAAGAAATTAGAAAA 57.192 29.630 0.00 0.00 0.00 2.29
343 348 9.268282 ACTAGTGGACCTCATTAAGAAATTAGA 57.732 33.333 0.00 0.00 0.00 2.10
344 349 9.319143 CACTAGTGGACCTCATTAAGAAATTAG 57.681 37.037 15.49 0.00 0.00 1.73
363 368 3.599343 TCAATGCAAGCTACCACTAGTG 58.401 45.455 16.34 16.34 0.00 2.74
364 369 3.369892 CCTCAATGCAAGCTACCACTAGT 60.370 47.826 0.00 0.00 0.00 2.57
365 370 3.118629 TCCTCAATGCAAGCTACCACTAG 60.119 47.826 0.00 0.00 0.00 2.57
366 371 2.837591 TCCTCAATGCAAGCTACCACTA 59.162 45.455 0.00 0.00 0.00 2.74
367 372 1.630369 TCCTCAATGCAAGCTACCACT 59.370 47.619 0.00 0.00 0.00 4.00
368 373 2.012673 CTCCTCAATGCAAGCTACCAC 58.987 52.381 0.00 0.00 0.00 4.16
369 374 1.908619 TCTCCTCAATGCAAGCTACCA 59.091 47.619 0.00 0.00 0.00 3.25
370 375 2.698855 TCTCCTCAATGCAAGCTACC 57.301 50.000 0.00 0.00 0.00 3.18
371 376 5.376854 TTTTTCTCCTCAATGCAAGCTAC 57.623 39.130 0.00 0.00 0.00 3.58
391 396 9.869757 GTAATTTGAGGCACCTACATTTATTTT 57.130 29.630 0.00 0.00 0.00 1.82
392 397 9.255029 AGTAATTTGAGGCACCTACATTTATTT 57.745 29.630 0.00 0.00 0.00 1.40
393 398 8.823220 AGTAATTTGAGGCACCTACATTTATT 57.177 30.769 0.00 0.00 0.00 1.40
394 399 8.823220 AAGTAATTTGAGGCACCTACATTTAT 57.177 30.769 0.00 0.00 0.00 1.40
395 400 8.644374 AAAGTAATTTGAGGCACCTACATTTA 57.356 30.769 0.00 0.00 0.00 1.40
396 401 7.539034 AAAGTAATTTGAGGCACCTACATTT 57.461 32.000 0.00 0.00 0.00 2.32
397 402 7.539034 AAAAGTAATTTGAGGCACCTACATT 57.461 32.000 0.00 0.00 0.00 2.71
398 403 7.015195 ACAAAAAGTAATTTGAGGCACCTACAT 59.985 33.333 6.76 0.00 41.73 2.29
399 404 6.322712 ACAAAAAGTAATTTGAGGCACCTACA 59.677 34.615 6.76 0.00 41.73 2.74
400 405 6.745116 ACAAAAAGTAATTTGAGGCACCTAC 58.255 36.000 6.76 0.00 41.73 3.18
401 406 6.547880 TGACAAAAAGTAATTTGAGGCACCTA 59.452 34.615 6.76 0.00 41.73 3.08
402 407 5.362430 TGACAAAAAGTAATTTGAGGCACCT 59.638 36.000 6.76 0.00 41.73 4.00
403 408 5.596845 TGACAAAAAGTAATTTGAGGCACC 58.403 37.500 6.76 0.00 41.73 5.01
404 409 6.922957 TCATGACAAAAAGTAATTTGAGGCAC 59.077 34.615 6.76 0.00 41.73 5.01
405 410 7.048629 TCATGACAAAAAGTAATTTGAGGCA 57.951 32.000 6.76 0.00 41.73 4.75
406 411 6.587608 CCTCATGACAAAAAGTAATTTGAGGC 59.412 38.462 6.76 0.00 41.73 4.70
407 412 6.587608 GCCTCATGACAAAAAGTAATTTGAGG 59.412 38.462 11.42 11.42 41.73 3.86
408 413 7.147312 TGCCTCATGACAAAAAGTAATTTGAG 58.853 34.615 6.76 0.00 41.73 3.02
409 414 7.048629 TGCCTCATGACAAAAAGTAATTTGA 57.951 32.000 6.76 0.00 41.73 2.69
410 415 7.894376 ATGCCTCATGACAAAAAGTAATTTG 57.106 32.000 0.00 0.00 44.11 2.32
411 416 9.590451 CATATGCCTCATGACAAAAAGTAATTT 57.410 29.630 0.00 0.00 0.00 1.82
412 417 8.752187 ACATATGCCTCATGACAAAAAGTAATT 58.248 29.630 1.58 0.00 0.00 1.40
413 418 8.297470 ACATATGCCTCATGACAAAAAGTAAT 57.703 30.769 1.58 0.00 0.00 1.89
414 419 7.701539 ACATATGCCTCATGACAAAAAGTAA 57.298 32.000 1.58 0.00 0.00 2.24
415 420 8.978874 ATACATATGCCTCATGACAAAAAGTA 57.021 30.769 1.58 0.00 0.00 2.24
416 421 7.013655 GGATACATATGCCTCATGACAAAAAGT 59.986 37.037 1.58 0.00 0.00 2.66
417 422 7.013559 TGGATACATATGCCTCATGACAAAAAG 59.986 37.037 1.58 0.00 46.17 2.27
418 423 6.832900 TGGATACATATGCCTCATGACAAAAA 59.167 34.615 1.58 0.00 46.17 1.94
419 424 6.363882 TGGATACATATGCCTCATGACAAAA 58.636 36.000 1.58 0.00 46.17 2.44
420 425 5.939447 TGGATACATATGCCTCATGACAAA 58.061 37.500 1.58 0.00 46.17 2.83
421 426 5.565455 TGGATACATATGCCTCATGACAA 57.435 39.130 1.58 0.00 46.17 3.18
437 442 4.391830 CGTACAATGGTGGCATATGGATAC 59.608 45.833 4.56 0.00 0.00 2.24
438 443 4.041075 ACGTACAATGGTGGCATATGGATA 59.959 41.667 4.56 0.00 0.00 2.59
439 444 3.181445 ACGTACAATGGTGGCATATGGAT 60.181 43.478 4.56 0.00 0.00 3.41
440 445 2.171659 ACGTACAATGGTGGCATATGGA 59.828 45.455 4.56 0.00 0.00 3.41
441 446 2.290367 CACGTACAATGGTGGCATATGG 59.710 50.000 4.56 0.00 0.00 2.74
442 447 2.286950 GCACGTACAATGGTGGCATATG 60.287 50.000 0.00 0.00 34.76 1.78
443 448 1.946768 GCACGTACAATGGTGGCATAT 59.053 47.619 0.00 0.00 34.76 1.78
444 449 1.374560 GCACGTACAATGGTGGCATA 58.625 50.000 0.00 0.00 34.76 3.14
445 450 2.179764 GCACGTACAATGGTGGCAT 58.820 52.632 0.00 0.00 34.76 4.40
446 451 3.661911 GCACGTACAATGGTGGCA 58.338 55.556 0.00 0.00 34.76 4.92
448 453 0.608035 AAGGGCACGTACAATGGTGG 60.608 55.000 0.00 0.00 34.76 4.61
449 454 2.006888 CTAAGGGCACGTACAATGGTG 58.993 52.381 0.00 0.00 37.22 4.17
450 455 1.903860 TCTAAGGGCACGTACAATGGT 59.096 47.619 0.00 0.00 0.00 3.55
451 456 2.684001 TCTAAGGGCACGTACAATGG 57.316 50.000 0.00 0.00 0.00 3.16
452 457 2.872245 CCATCTAAGGGCACGTACAATG 59.128 50.000 0.00 0.00 0.00 2.82
453 458 2.769663 TCCATCTAAGGGCACGTACAAT 59.230 45.455 0.00 0.00 0.00 2.71
454 459 2.181125 TCCATCTAAGGGCACGTACAA 58.819 47.619 0.00 0.00 0.00 2.41
455 460 1.855295 TCCATCTAAGGGCACGTACA 58.145 50.000 0.00 0.00 0.00 2.90
456 461 2.934553 GTTTCCATCTAAGGGCACGTAC 59.065 50.000 0.00 0.00 0.00 3.67
457 462 2.568062 TGTTTCCATCTAAGGGCACGTA 59.432 45.455 0.00 0.00 0.00 3.57
458 463 1.349688 TGTTTCCATCTAAGGGCACGT 59.650 47.619 0.00 0.00 0.00 4.49
459 464 2.107950 TGTTTCCATCTAAGGGCACG 57.892 50.000 0.00 0.00 0.00 5.34
460 465 2.164422 GCTTGTTTCCATCTAAGGGCAC 59.836 50.000 0.00 0.00 0.00 5.01
461 466 2.446435 GCTTGTTTCCATCTAAGGGCA 58.554 47.619 0.00 0.00 0.00 5.36
462 467 1.401905 CGCTTGTTTCCATCTAAGGGC 59.598 52.381 0.00 0.00 0.00 5.19
463 468 1.401905 GCGCTTGTTTCCATCTAAGGG 59.598 52.381 0.00 0.00 36.52 3.95
464 469 2.083774 TGCGCTTGTTTCCATCTAAGG 58.916 47.619 9.73 0.00 0.00 2.69
482 487 2.267324 GTGGAGCCAGAGAGGTGC 59.733 66.667 0.00 0.00 40.61 5.01
512 517 2.946947 GCTAGCAGCAAGGTCCAAA 58.053 52.632 10.63 0.00 41.89 3.28
544 549 1.751563 GGGAGAGATAGGCTGCACC 59.248 63.158 0.50 0.00 39.61 5.01
730 997 1.518903 GGGCTTTGTCACAGAGTGCC 61.519 60.000 0.00 1.00 38.28 5.01
785 1078 5.642063 CACGAGAGGGCTTATTTGTCTAAAA 59.358 40.000 0.00 0.00 0.00 1.52
786 1079 5.175859 CACGAGAGGGCTTATTTGTCTAAA 58.824 41.667 0.00 0.00 0.00 1.85
787 1080 4.222145 ACACGAGAGGGCTTATTTGTCTAA 59.778 41.667 0.00 0.00 38.93 2.10
788 1081 3.767673 ACACGAGAGGGCTTATTTGTCTA 59.232 43.478 0.00 0.00 38.93 2.59
789 1082 2.567615 ACACGAGAGGGCTTATTTGTCT 59.432 45.455 0.00 0.00 38.93 3.41
790 1083 2.973945 ACACGAGAGGGCTTATTTGTC 58.026 47.619 0.00 0.00 38.93 3.18
791 1084 3.418684 AACACGAGAGGGCTTATTTGT 57.581 42.857 0.00 0.00 38.93 2.83
792 1085 3.871594 CCTAACACGAGAGGGCTTATTTG 59.128 47.826 0.00 0.00 38.93 2.32
793 1086 3.681874 GCCTAACACGAGAGGGCTTATTT 60.682 47.826 0.00 0.00 38.93 1.40
794 1087 2.158943 GCCTAACACGAGAGGGCTTATT 60.159 50.000 0.00 0.00 38.93 1.40
795 1088 1.413077 GCCTAACACGAGAGGGCTTAT 59.587 52.381 0.00 0.00 38.93 1.73
796 1089 0.822164 GCCTAACACGAGAGGGCTTA 59.178 55.000 0.00 0.00 38.93 3.09
797 1090 1.597461 GCCTAACACGAGAGGGCTT 59.403 57.895 0.00 0.00 38.93 4.35
798 1091 3.300013 GCCTAACACGAGAGGGCT 58.700 61.111 0.00 0.00 38.93 5.19
800 1093 0.613777 AAAGGCCTAACACGAGAGGG 59.386 55.000 5.16 0.00 43.28 4.30
801 1094 2.474410 AAAAGGCCTAACACGAGAGG 57.526 50.000 5.16 0.00 35.78 3.69
802 1095 3.433615 CAGAAAAAGGCCTAACACGAGAG 59.566 47.826 5.16 0.00 0.00 3.20
803 1096 3.399330 CAGAAAAAGGCCTAACACGAGA 58.601 45.455 5.16 0.00 0.00 4.04
804 1097 2.095718 GCAGAAAAAGGCCTAACACGAG 60.096 50.000 5.16 0.00 0.00 4.18
805 1098 1.877443 GCAGAAAAAGGCCTAACACGA 59.123 47.619 5.16 0.00 0.00 4.35
806 1099 1.880027 AGCAGAAAAAGGCCTAACACG 59.120 47.619 5.16 0.00 0.00 4.49
807 1100 3.149981 AGAGCAGAAAAAGGCCTAACAC 58.850 45.455 5.16 0.00 0.00 3.32
808 1101 3.412386 GAGAGCAGAAAAAGGCCTAACA 58.588 45.455 5.16 0.00 0.00 2.41
809 1102 2.750166 GGAGAGCAGAAAAAGGCCTAAC 59.250 50.000 5.16 0.00 0.00 2.34
810 1103 2.644798 AGGAGAGCAGAAAAAGGCCTAA 59.355 45.455 5.16 0.00 0.00 2.69
811 1104 2.269940 AGGAGAGCAGAAAAAGGCCTA 58.730 47.619 5.16 0.00 0.00 3.93
812 1105 1.071434 AGGAGAGCAGAAAAAGGCCT 58.929 50.000 0.00 0.00 0.00 5.19
813 1106 1.916506 AAGGAGAGCAGAAAAAGGCC 58.083 50.000 0.00 0.00 0.00 5.19
814 1107 3.571828 AGAAAAGGAGAGCAGAAAAAGGC 59.428 43.478 0.00 0.00 0.00 4.35
815 1108 5.781210 AAGAAAAGGAGAGCAGAAAAAGG 57.219 39.130 0.00 0.00 0.00 3.11
816 1109 6.799512 TCAAAGAAAAGGAGAGCAGAAAAAG 58.200 36.000 0.00 0.00 0.00 2.27
817 1110 6.773976 TCAAAGAAAAGGAGAGCAGAAAAA 57.226 33.333 0.00 0.00 0.00 1.94
898 1194 4.199310 TGCATGTATTGGGCTTCTTACTC 58.801 43.478 0.00 0.00 0.00 2.59
900 1196 3.243201 GCTGCATGTATTGGGCTTCTTAC 60.243 47.826 0.00 0.00 0.00 2.34
939 1235 0.187117 TGATGGAGAGAGATCGGCCT 59.813 55.000 0.00 0.00 0.00 5.19
1060 1364 4.719369 GAAGCGCGAGACCACGGT 62.719 66.667 12.10 0.00 42.60 4.83
1064 1368 2.048222 CCAAGAAGCGCGAGACCA 60.048 61.111 12.10 0.00 0.00 4.02
1243 1547 5.348724 CGGAATGAAAGACTCAATTCGAGAA 59.651 40.000 10.61 0.00 45.45 2.87
1244 1548 4.864806 CGGAATGAAAGACTCAATTCGAGA 59.135 41.667 10.61 0.00 45.45 4.04
1255 1559 4.889832 ATCTTGATGCGGAATGAAAGAC 57.110 40.909 0.00 0.00 0.00 3.01
1287 1591 3.103447 TCTGATTCGAGCTGGCTAATG 57.897 47.619 0.00 0.00 0.00 1.90
1461 1773 3.119291 CGCGATCAGAACTCTAGCAAAT 58.881 45.455 0.00 0.00 0.00 2.32
1472 1784 2.165641 ACAATGTAGGTCGCGATCAGAA 59.834 45.455 23.39 6.23 0.00 3.02
1495 1807 5.467035 TCTGCCCCAAATAAACAAAAGAG 57.533 39.130 0.00 0.00 0.00 2.85
1497 1809 5.363939 TGTTCTGCCCCAAATAAACAAAAG 58.636 37.500 0.00 0.00 0.00 2.27
1503 1815 3.307339 GCCATTGTTCTGCCCCAAATAAA 60.307 43.478 0.00 0.00 0.00 1.40
1504 1816 2.235898 GCCATTGTTCTGCCCCAAATAA 59.764 45.455 0.00 0.00 0.00 1.40
1505 1817 1.830477 GCCATTGTTCTGCCCCAAATA 59.170 47.619 0.00 0.00 0.00 1.40
1506 1818 0.614812 GCCATTGTTCTGCCCCAAAT 59.385 50.000 0.00 0.00 0.00 2.32
1518 1830 6.839124 TTCATTTAGATTGACTGCCATTGT 57.161 33.333 0.00 0.00 0.00 2.71
1585 2103 3.988976 AAATCAAGCAGAGTAGAGCCA 57.011 42.857 0.00 0.00 0.00 4.75
1609 2128 7.234371 TCCATAGGAGAGGAAATATTGACAGAG 59.766 40.741 0.00 0.00 0.00 3.35
1768 2688 4.261572 GCAGGAGCTGTGTTGTTTCAATTA 60.262 41.667 0.00 0.00 37.91 1.40
1834 2754 4.587262 CCTACTGTTTTAGTTTGGGGCTTT 59.413 41.667 0.00 0.00 40.89 3.51
1835 2755 4.149598 CCTACTGTTTTAGTTTGGGGCTT 58.850 43.478 0.00 0.00 40.89 4.35
1837 2757 2.230508 GCCTACTGTTTTAGTTTGGGGC 59.769 50.000 0.00 0.00 40.89 5.80
1840 2760 4.823790 AACGCCTACTGTTTTAGTTTGG 57.176 40.909 0.00 0.00 40.89 3.28
1841 2761 4.439776 GCAAACGCCTACTGTTTTAGTTTG 59.560 41.667 18.40 18.40 45.40 2.93
1859 2779 9.123709 TGATCGTATTAATTTCAGTTTGCAAAC 57.876 29.630 30.63 30.63 39.17 2.93
1913 2885 9.755122 TGCACTATAGGTCTTATCACATAGTAT 57.245 33.333 4.43 0.00 30.21 2.12
1926 2898 5.163269 TGCATGAAGATTGCACTATAGGTCT 60.163 40.000 4.43 0.00 44.73 3.85
1928 2900 5.039920 TGCATGAAGATTGCACTATAGGT 57.960 39.130 4.43 0.00 44.73 3.08
1963 2935 4.826274 AATGAGAAATTCCGGACAGAGA 57.174 40.909 1.83 0.00 0.00 3.10
2225 3204 7.042791 CCAAGCTACAACAATTAACAAACTTGG 60.043 37.037 0.00 0.00 42.14 3.61
2267 3246 2.039746 TGGGTACACATCTTCCTTGGTG 59.960 50.000 0.00 0.00 37.29 4.17
2296 3275 1.740025 GTATCTTGGCAGGTGACTTGC 59.260 52.381 11.57 11.57 40.21 4.01
2530 3524 2.317230 CGAAGCCGTTTCAACCAGT 58.683 52.632 0.00 0.00 35.43 4.00
2603 3597 1.403780 CCTTTGCTGCAGCCAATCTTC 60.404 52.381 34.64 6.50 41.18 2.87
2772 3786 0.104671 GCAGCCAGGAAGCAAAAACA 59.895 50.000 0.00 0.00 34.23 2.83
2820 3853 0.395586 AGCTTGTGTGTGGCCTGAAA 60.396 50.000 3.32 0.00 0.00 2.69
2957 3990 7.537596 TGGATGATTACCAAACAAGAACATT 57.462 32.000 0.00 0.00 34.25 2.71
2966 4000 7.925993 TCGAAATACATGGATGATTACCAAAC 58.074 34.615 0.00 0.00 40.93 2.93
2975 4009 6.260714 CACCATCTTTCGAAATACATGGATGA 59.739 38.462 31.22 17.07 35.67 2.92
3081 4125 6.043854 AGGGAGTAGTAGCTGAAAAAGAAG 57.956 41.667 0.00 0.00 0.00 2.85
3082 4126 5.046520 GGAGGGAGTAGTAGCTGAAAAAGAA 60.047 44.000 0.00 0.00 0.00 2.52
3083 4127 4.466726 GGAGGGAGTAGTAGCTGAAAAAGA 59.533 45.833 0.00 0.00 0.00 2.52
3084 4128 4.678309 CGGAGGGAGTAGTAGCTGAAAAAG 60.678 50.000 0.00 0.00 0.00 2.27
3085 4129 3.194968 CGGAGGGAGTAGTAGCTGAAAAA 59.805 47.826 0.00 0.00 0.00 1.94
3086 4130 2.758979 CGGAGGGAGTAGTAGCTGAAAA 59.241 50.000 0.00 0.00 0.00 2.29
3087 4131 2.291411 ACGGAGGGAGTAGTAGCTGAAA 60.291 50.000 0.00 0.00 0.00 2.69
3088 4132 1.284198 ACGGAGGGAGTAGTAGCTGAA 59.716 52.381 0.00 0.00 0.00 3.02
3089 4133 0.917533 ACGGAGGGAGTAGTAGCTGA 59.082 55.000 0.00 0.00 0.00 4.26
3090 4134 1.677052 GAACGGAGGGAGTAGTAGCTG 59.323 57.143 0.00 0.00 0.00 4.24
3091 4135 1.565288 AGAACGGAGGGAGTAGTAGCT 59.435 52.381 0.00 0.00 0.00 3.32
3092 4136 2.055684 AGAACGGAGGGAGTAGTAGC 57.944 55.000 0.00 0.00 0.00 3.58
3093 4137 6.712179 ATTTTAGAACGGAGGGAGTAGTAG 57.288 41.667 0.00 0.00 0.00 2.57
3094 4138 7.577303 TCTATTTTAGAACGGAGGGAGTAGTA 58.423 38.462 0.00 0.00 0.00 1.82
3095 4139 6.430007 TCTATTTTAGAACGGAGGGAGTAGT 58.570 40.000 0.00 0.00 0.00 2.73
3096 4140 6.956202 TCTATTTTAGAACGGAGGGAGTAG 57.044 41.667 0.00 0.00 0.00 2.57
3097 4141 7.014038 GTCATCTATTTTAGAACGGAGGGAGTA 59.986 40.741 0.00 0.00 38.50 2.59
3098 4142 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
3099 4143 6.041069 AGTCATCTATTTTAGAACGGAGGGAG 59.959 42.308 0.00 0.00 38.50 4.30
3100 4144 5.897824 AGTCATCTATTTTAGAACGGAGGGA 59.102 40.000 0.00 0.00 38.50 4.20
3101 4145 6.163135 AGTCATCTATTTTAGAACGGAGGG 57.837 41.667 0.00 0.00 38.50 4.30
3102 4146 6.806751 TGAGTCATCTATTTTAGAACGGAGG 58.193 40.000 0.00 0.00 38.50 4.30
3103 4147 7.976734 AGTTGAGTCATCTATTTTAGAACGGAG 59.023 37.037 1.70 0.00 38.50 4.63
3104 4148 7.837863 AGTTGAGTCATCTATTTTAGAACGGA 58.162 34.615 1.70 0.00 38.50 4.69
3105 4149 8.480643 AAGTTGAGTCATCTATTTTAGAACGG 57.519 34.615 4.14 0.00 38.50 4.44
3106 4150 9.746711 CAAAGTTGAGTCATCTATTTTAGAACG 57.253 33.333 4.14 0.00 38.50 3.95
3113 4157 9.372369 GCTAGTACAAAGTTGAGTCATCTATTT 57.628 33.333 4.14 0.00 0.00 1.40
3114 4158 8.754080 AGCTAGTACAAAGTTGAGTCATCTATT 58.246 33.333 4.14 0.00 0.00 1.73
3115 4159 8.299990 AGCTAGTACAAAGTTGAGTCATCTAT 57.700 34.615 4.14 0.00 0.00 1.98
3116 4160 7.704578 AGCTAGTACAAAGTTGAGTCATCTA 57.295 36.000 4.14 0.00 0.00 1.98
3117 4161 6.597832 AGCTAGTACAAAGTTGAGTCATCT 57.402 37.500 0.00 0.00 0.00 2.90
3118 4162 6.091441 CCAAGCTAGTACAAAGTTGAGTCATC 59.909 42.308 0.00 0.00 0.00 2.92
3119 4163 5.934625 CCAAGCTAGTACAAAGTTGAGTCAT 59.065 40.000 0.00 0.00 0.00 3.06
3120 4164 5.069914 TCCAAGCTAGTACAAAGTTGAGTCA 59.930 40.000 0.00 0.00 0.00 3.41
3121 4165 5.539048 TCCAAGCTAGTACAAAGTTGAGTC 58.461 41.667 0.00 0.00 0.00 3.36
3122 4166 5.546621 TCCAAGCTAGTACAAAGTTGAGT 57.453 39.130 0.00 0.00 0.00 3.41
3123 4167 5.107453 CGTTCCAAGCTAGTACAAAGTTGAG 60.107 44.000 0.00 0.00 0.00 3.02
3124 4168 4.748102 CGTTCCAAGCTAGTACAAAGTTGA 59.252 41.667 0.00 0.00 0.00 3.18
3125 4169 4.084013 CCGTTCCAAGCTAGTACAAAGTTG 60.084 45.833 0.00 0.75 0.00 3.16
3126 4170 4.062991 CCGTTCCAAGCTAGTACAAAGTT 58.937 43.478 0.00 0.00 0.00 2.66
3127 4171 3.322828 TCCGTTCCAAGCTAGTACAAAGT 59.677 43.478 0.00 0.00 0.00 2.66
3128 4172 3.921677 TCCGTTCCAAGCTAGTACAAAG 58.078 45.455 0.00 0.00 0.00 2.77
3129 4173 3.306502 CCTCCGTTCCAAGCTAGTACAAA 60.307 47.826 0.00 0.00 0.00 2.83
3130 4174 2.232941 CCTCCGTTCCAAGCTAGTACAA 59.767 50.000 0.00 0.00 0.00 2.41
3131 4175 1.822990 CCTCCGTTCCAAGCTAGTACA 59.177 52.381 0.00 0.00 0.00 2.90
3132 4176 1.136500 CCCTCCGTTCCAAGCTAGTAC 59.864 57.143 0.00 0.00 0.00 2.73
3133 4177 1.006281 TCCCTCCGTTCCAAGCTAGTA 59.994 52.381 0.00 0.00 0.00 1.82
3134 4178 0.252103 TCCCTCCGTTCCAAGCTAGT 60.252 55.000 0.00 0.00 0.00 2.57
3135 4179 0.461961 CTCCCTCCGTTCCAAGCTAG 59.538 60.000 0.00 0.00 0.00 3.42
3136 4180 0.252103 ACTCCCTCCGTTCCAAGCTA 60.252 55.000 0.00 0.00 0.00 3.32
3137 4181 0.252103 TACTCCCTCCGTTCCAAGCT 60.252 55.000 0.00 0.00 0.00 3.74
3138 4182 0.108281 GTACTCCCTCCGTTCCAAGC 60.108 60.000 0.00 0.00 0.00 4.01
3139 4183 1.558233 AGTACTCCCTCCGTTCCAAG 58.442 55.000 0.00 0.00 0.00 3.61
3140 4184 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
3141 4185 2.042162 AGTAAGTACTCCCTCCGTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
3142 4186 2.732763 AGTAAGTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
3143 4187 4.335037 CACTAGTAAGTACTCCCTCCGTTC 59.665 50.000 0.00 0.00 37.73 3.95
3144 4188 4.268359 CACTAGTAAGTACTCCCTCCGTT 58.732 47.826 0.00 0.00 37.73 4.44
3145 4189 3.883669 CACTAGTAAGTACTCCCTCCGT 58.116 50.000 0.00 0.00 37.73 4.69
3146 4190 2.617774 GCACTAGTAAGTACTCCCTCCG 59.382 54.545 0.00 0.00 37.73 4.63
3147 4191 2.957680 GGCACTAGTAAGTACTCCCTCC 59.042 54.545 0.00 0.00 37.73 4.30
3148 4192 3.629087 TGGCACTAGTAAGTACTCCCTC 58.371 50.000 0.00 0.00 37.73 4.30
3149 4193 3.752359 TGGCACTAGTAAGTACTCCCT 57.248 47.619 0.00 0.00 37.73 4.20
3150 4194 4.216708 AGATGGCACTAGTAAGTACTCCC 58.783 47.826 0.00 0.00 37.73 4.30
3151 4195 6.943718 AGATAGATGGCACTAGTAAGTACTCC 59.056 42.308 0.00 0.00 37.73 3.85
3152 4196 7.574217 GCAGATAGATGGCACTAGTAAGTACTC 60.574 44.444 0.00 0.00 37.73 2.59
3153 4197 6.207810 GCAGATAGATGGCACTAGTAAGTACT 59.792 42.308 0.00 0.00 40.24 2.73
3154 4198 6.383415 GCAGATAGATGGCACTAGTAAGTAC 58.617 44.000 0.00 0.00 33.48 2.73
3155 4199 5.477291 GGCAGATAGATGGCACTAGTAAGTA 59.523 44.000 0.00 0.00 44.71 2.24
3156 4200 4.282195 GGCAGATAGATGGCACTAGTAAGT 59.718 45.833 0.00 0.00 44.71 2.24
3209 4253 3.991773 TCGGTTACTTACACATCAAGCAC 59.008 43.478 0.00 0.00 0.00 4.40
3212 4256 5.637810 ACACATCGGTTACTTACACATCAAG 59.362 40.000 0.00 0.00 0.00 3.02
3216 4260 6.694447 ACTTACACATCGGTTACTTACACAT 58.306 36.000 0.00 0.00 0.00 3.21
3217 4261 6.088016 ACTTACACATCGGTTACTTACACA 57.912 37.500 0.00 0.00 0.00 3.72
3218 4262 7.062255 GGTTACTTACACATCGGTTACTTACAC 59.938 40.741 0.00 0.00 0.00 2.90
3220 4264 6.251376 CGGTTACTTACACATCGGTTACTTAC 59.749 42.308 0.00 0.00 0.00 2.34
3221 4265 6.150307 TCGGTTACTTACACATCGGTTACTTA 59.850 38.462 0.00 0.00 0.00 2.24
3222 4266 5.048083 TCGGTTACTTACACATCGGTTACTT 60.048 40.000 0.00 0.00 0.00 2.24
3223 4267 4.458989 TCGGTTACTTACACATCGGTTACT 59.541 41.667 0.00 0.00 0.00 2.24
3224 4268 4.732784 TCGGTTACTTACACATCGGTTAC 58.267 43.478 0.00 0.00 0.00 2.50
3225 4269 5.384063 TTCGGTTACTTACACATCGGTTA 57.616 39.130 0.00 0.00 0.00 2.85
3226 4270 3.940209 TCGGTTACTTACACATCGGTT 57.060 42.857 0.00 0.00 0.00 4.44
3227 4271 3.940209 TTCGGTTACTTACACATCGGT 57.060 42.857 0.00 0.00 0.00 4.69
3228 4272 4.503007 CAGATTCGGTTACTTACACATCGG 59.497 45.833 0.00 0.00 0.00 4.18
3229 4273 5.337554 TCAGATTCGGTTACTTACACATCG 58.662 41.667 0.00 0.00 0.00 3.84
3260 4304 3.494626 AGTGAATCGATTGTCACACACAC 59.505 43.478 24.85 18.59 45.40 3.82
3265 4309 4.688879 GTGGTTAGTGAATCGATTGTCACA 59.311 41.667 24.85 11.82 45.40 3.58
3283 4327 4.908601 TCACACCATAATCTCAGTGGTT 57.091 40.909 0.00 0.00 43.44 3.67
3286 4330 4.449131 AGCATCACACCATAATCTCAGTG 58.551 43.478 0.00 0.00 36.30 3.66
3288 4332 5.121105 TGAAGCATCACACCATAATCTCAG 58.879 41.667 0.00 0.00 0.00 3.35
3338 4384 2.365582 TGCTCATCTGCACGTACTCTA 58.634 47.619 0.00 0.00 38.12 2.43
3341 4387 2.680312 ATTGCTCATCTGCACGTACT 57.320 45.000 0.00 0.00 43.20 2.73
3342 4388 5.920840 TCTAATATTGCTCATCTGCACGTAC 59.079 40.000 0.00 0.00 43.20 3.67
3344 4390 4.948847 TCTAATATTGCTCATCTGCACGT 58.051 39.130 0.00 0.00 43.20 4.49
3345 4391 5.670588 GCATCTAATATTGCTCATCTGCACG 60.671 44.000 0.00 0.00 43.20 5.34
3372 4430 7.278203 CAGATATAAGCATAATCACCAGCTGAG 59.722 40.741 17.39 8.04 37.41 3.35
3406 4464 3.444742 TCTCGGTACACATGTTAATCGGT 59.555 43.478 9.35 0.50 0.00 4.69
3458 4516 0.938713 TTTTTGTGGGTACGAGTGCG 59.061 50.000 0.00 0.00 44.79 5.34
3494 4552 1.115467 TTGTTTTGCCGGGACATTGT 58.885 45.000 2.18 0.00 0.00 2.71
3497 4555 1.482593 TGTTTTGTTTTGCCGGGACAT 59.517 42.857 2.18 0.00 0.00 3.06
3501 4559 1.063321 GCTTTGTTTTGTTTTGCCGGG 59.937 47.619 2.18 0.00 0.00 5.73
3516 4579 4.107622 CACTGTCCAGAAACTTTGCTTTG 58.892 43.478 0.40 0.00 0.00 2.77
3520 4583 1.338020 CCCACTGTCCAGAAACTTTGC 59.662 52.381 0.40 0.00 0.00 3.68
3551 4614 4.278170 ACGAATGCCTGTTGATCAAGAAAA 59.722 37.500 8.80 0.00 0.00 2.29
3576 4639 2.037136 CAGGAAGGAAGGCTGCACG 61.037 63.158 0.50 0.00 0.00 5.34
3581 4644 2.664081 CGGAGCAGGAAGGAAGGCT 61.664 63.158 0.00 0.00 39.75 4.58
3594 4657 1.569479 GCCTTCTGTTCACACGGAGC 61.569 60.000 0.00 0.00 39.59 4.70
3599 4662 1.859998 GCAAACGCCTTCTGTTCACAC 60.860 52.381 0.00 0.00 0.00 3.82
3603 4666 4.944249 GGCAAACGCCTTCTGTTC 57.056 55.556 0.00 0.00 46.85 3.18
3618 4681 3.286751 TGTTCTGCAGCAACCGGC 61.287 61.111 9.47 0.00 45.30 6.13
3644 4714 1.302591 CGATCGGATCTCCCCTCGA 60.303 63.158 15.50 0.00 38.16 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.