Multiple sequence alignment - TraesCS5B01G153200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G153200 chr5B 100.000 7498 0 0 1 7498 282394524 282387027 0.000000e+00 13847.0
1 TraesCS5B01G153200 chr5B 91.603 262 18 2 6888 7145 548927411 548927672 7.150000e-95 359.0
2 TraesCS5B01G153200 chr5B 75.779 706 164 5 6792 7491 672842231 672842935 4.310000e-92 350.0
3 TraesCS5B01G153200 chr5B 100.000 128 0 0 3350 3477 282391050 282390923 3.500000e-58 237.0
4 TraesCS5B01G153200 chr5B 100.000 128 0 0 3475 3602 282391175 282391048 3.500000e-58 237.0
5 TraesCS5B01G153200 chr5B 92.958 142 6 3 2411 2549 223686735 223686595 3.550000e-48 204.0
6 TraesCS5B01G153200 chr5D 95.311 3583 126 23 3947 7498 249791486 249787915 0.000000e+00 5648.0
7 TraesCS5B01G153200 chr5D 91.650 2443 108 42 1 2413 249795102 249792726 0.000000e+00 3293.0
8 TraesCS5B01G153200 chr5D 94.196 982 18 7 2527 3477 249792727 249791754 0.000000e+00 1461.0
9 TraesCS5B01G153200 chr5D 93.523 386 15 8 3475 3852 249791881 249791498 3.930000e-157 566.0
10 TraesCS5B01G153200 chr5A 94.459 2743 136 5 3947 6679 332300115 332297379 0.000000e+00 4209.0
11 TraesCS5B01G153200 chr5A 90.363 2449 135 49 1 2413 332304108 332301725 0.000000e+00 3121.0
12 TraesCS5B01G153200 chr5A 87.865 651 19 12 2527 3145 332301696 332301074 0.000000e+00 710.0
13 TraesCS5B01G153200 chr5A 87.263 581 14 10 2701 3249 332301550 332300998 6.430000e-170 608.0
14 TraesCS5B01G153200 chr5A 92.228 386 19 6 3475 3852 332300509 332300127 3.080000e-148 536.0
15 TraesCS5B01G153200 chr5A 96.983 232 7 0 3246 3477 332300613 332300382 2.540000e-104 390.0
16 TraesCS5B01G153200 chr7B 91.582 1081 73 9 1211 2291 665725129 665726191 0.000000e+00 1476.0
17 TraesCS5B01G153200 chr7B 82.389 494 80 5 6845 7332 164105156 164104664 2.500000e-114 424.0
18 TraesCS5B01G153200 chr7B 75.672 707 163 7 6792 7491 678852447 678853151 2.000000e-90 344.0
19 TraesCS5B01G153200 chr7B 97.436 78 2 0 3871 3948 562993085 562993162 4.720000e-27 134.0
20 TraesCS5B01G153200 chr6B 90.386 1113 62 7 1211 2291 18590884 18591983 0.000000e+00 1421.0
21 TraesCS5B01G153200 chr6B 90.081 494 43 1 1215 1702 719100573 719101066 2.950000e-178 636.0
22 TraesCS5B01G153200 chr6B 90.787 445 41 0 1847 2291 719101052 719101496 5.010000e-166 595.0
23 TraesCS5B01G153200 chr6B 92.308 91 6 1 3871 3961 36138915 36139004 2.200000e-25 128.0
24 TraesCS5B01G153200 chr6B 100.000 28 0 0 3851 3878 475582037 475582064 1.400000e-02 52.8
25 TraesCS5B01G153200 chr4A 78.093 2360 418 64 4010 6325 459634522 459632218 0.000000e+00 1402.0
26 TraesCS5B01G153200 chr4A 88.428 1132 109 15 1204 2332 459637242 459636130 0.000000e+00 1345.0
27 TraesCS5B01G153200 chr4A 96.923 130 2 2 2408 2535 252658835 252658964 4.560000e-52 217.0
28 TraesCS5B01G153200 chr4A 94.118 85 4 1 3871 3955 666944602 666944685 2.200000e-25 128.0
29 TraesCS5B01G153200 chr4B 78.105 2343 420 62 4010 6315 178847338 178849624 0.000000e+00 1399.0
30 TraesCS5B01G153200 chr4B 88.500 1113 116 10 1220 2329 178844664 178845767 0.000000e+00 1336.0
31 TraesCS5B01G153200 chr4D 88.722 1135 115 10 1198 2329 116813525 116814649 0.000000e+00 1375.0
32 TraesCS5B01G153200 chr4D 77.849 2343 421 66 4010 6315 116816052 116818333 0.000000e+00 1362.0
33 TraesCS5B01G153200 chr4D 90.593 776 55 5 6740 7498 51903925 51904699 0.000000e+00 1013.0
34 TraesCS5B01G153200 chr1D 90.556 773 56 4 6743 7498 462862038 462861266 0.000000e+00 1007.0
35 TraesCS5B01G153200 chr3A 85.832 607 73 6 6898 7498 51407754 51407155 3.820000e-177 632.0
36 TraesCS5B01G153200 chr3D 83.461 393 49 9 6740 7117 608386870 608387261 1.200000e-92 351.0
37 TraesCS5B01G153200 chr2B 99.180 122 1 0 2408 2529 788660355 788660476 3.520000e-53 220.0
38 TraesCS5B01G153200 chr2B 97.600 125 3 0 2405 2529 510590396 510590520 1.640000e-51 215.0
39 TraesCS5B01G153200 chr2B 94.853 136 6 1 2399 2533 653633482 653633347 2.120000e-50 211.0
40 TraesCS5B01G153200 chr6A 100.000 118 0 0 2412 2529 601207225 601207342 1.270000e-52 219.0
41 TraesCS5B01G153200 chr3B 97.638 127 3 0 2409 2535 600907269 600907143 1.270000e-52 219.0
42 TraesCS5B01G153200 chr3B 98.347 121 2 0 2411 2531 111681154 111681034 5.890000e-51 213.0
43 TraesCS5B01G153200 chr7A 96.850 127 4 0 2403 2529 236349304 236349178 5.890000e-51 213.0
44 TraesCS5B01G153200 chr7D 85.271 129 19 0 1362 1490 109374493 109374621 4.720000e-27 134.0
45 TraesCS5B01G153200 chr6D 97.436 78 2 0 3871 3948 808224 808301 4.720000e-27 134.0
46 TraesCS5B01G153200 chr2D 96.296 81 3 0 3871 3951 98693578 98693498 4.720000e-27 134.0
47 TraesCS5B01G153200 chr2D 95.294 85 3 1 3871 3954 382198231 382198147 4.720000e-27 134.0
48 TraesCS5B01G153200 chr1B 95.181 83 4 0 3871 3953 662491676 662491758 1.700000e-26 132.0
49 TraesCS5B01G153200 chr1A 94.253 87 3 2 3871 3956 432202655 432202740 1.700000e-26 132.0
50 TraesCS5B01G153200 chr1A 93.258 89 4 2 3871 3958 447120723 447120636 6.110000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G153200 chr5B 282387027 282394524 7497 True 4773.666667 13847 100.000000 1 7498 3 chr5B.!!$R2 7497
1 TraesCS5B01G153200 chr5B 672842231 672842935 704 False 350.000000 350 75.779000 6792 7491 1 chr5B.!!$F2 699
2 TraesCS5B01G153200 chr5D 249787915 249795102 7187 True 2742.000000 5648 93.670000 1 7498 4 chr5D.!!$R1 7497
3 TraesCS5B01G153200 chr5A 332297379 332304108 6729 True 1595.666667 4209 91.526833 1 6679 6 chr5A.!!$R1 6678
4 TraesCS5B01G153200 chr7B 665725129 665726191 1062 False 1476.000000 1476 91.582000 1211 2291 1 chr7B.!!$F2 1080
5 TraesCS5B01G153200 chr7B 678852447 678853151 704 False 344.000000 344 75.672000 6792 7491 1 chr7B.!!$F3 699
6 TraesCS5B01G153200 chr6B 18590884 18591983 1099 False 1421.000000 1421 90.386000 1211 2291 1 chr6B.!!$F1 1080
7 TraesCS5B01G153200 chr6B 719100573 719101496 923 False 615.500000 636 90.434000 1215 2291 2 chr6B.!!$F4 1076
8 TraesCS5B01G153200 chr4A 459632218 459637242 5024 True 1373.500000 1402 83.260500 1204 6325 2 chr4A.!!$R1 5121
9 TraesCS5B01G153200 chr4B 178844664 178849624 4960 False 1367.500000 1399 83.302500 1220 6315 2 chr4B.!!$F1 5095
10 TraesCS5B01G153200 chr4D 116813525 116818333 4808 False 1368.500000 1375 83.285500 1198 6315 2 chr4D.!!$F2 5117
11 TraesCS5B01G153200 chr4D 51903925 51904699 774 False 1013.000000 1013 90.593000 6740 7498 1 chr4D.!!$F1 758
12 TraesCS5B01G153200 chr1D 462861266 462862038 772 True 1007.000000 1007 90.556000 6743 7498 1 chr1D.!!$R1 755
13 TraesCS5B01G153200 chr3A 51407155 51407754 599 True 632.000000 632 85.832000 6898 7498 1 chr3A.!!$R1 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
348 358 0.027586 ACAAATATCTTTCGGCGCGC 59.972 50.000 25.94 25.94 0.00 6.86 F
881 916 0.034380 ACTGCCTCTACCGCTAGACA 60.034 55.000 0.00 0.00 0.00 3.41 F
2429 2558 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13 F
2433 2562 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 F
2524 2653 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
3867 4817 0.240945 CCGTCACAATCCAAACAGCC 59.759 55.000 0.00 0.00 0.00 4.85 F
3870 4820 0.482446 TCACAATCCAAACAGCCCCT 59.518 50.000 0.00 0.00 0.00 4.79 F
4521 5473 0.539051 AGGAAGCCAGAGGATCAACG 59.461 55.000 0.00 0.00 37.82 4.10 F
4606 5558 1.416401 TCTGAGCAAAGGTTCCGAGTT 59.584 47.619 0.00 0.00 0.00 3.01 F
6086 7068 0.321653 AACTGGCCAACGACATCCTC 60.322 55.000 7.01 0.00 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1164 1229 0.465097 CTGGCTGGCTGGGATTACTG 60.465 60.000 2.00 0.00 0.00 2.74 R
2414 2543 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
3930 4880 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28 R
3931 4881 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12 R
3932 4882 0.324091 GAACTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37 R
5509 6467 1.699083 TGTCCTGAATGAGGCAGTCAA 59.301 47.619 0.00 0.00 42.47 3.18 R
5788 6755 2.301346 CAGAAGCCTGAAGTTTGGTGT 58.699 47.619 0.00 0.00 43.02 4.16 R
6086 7068 0.389948 GTACGTTGCTCAGGTCCTGG 60.390 60.000 19.11 10.61 31.51 4.45 R
6108 7090 2.270205 CGAGGCCAGGATGTTGCT 59.730 61.111 5.01 0.00 0.00 3.91 R
6893 7900 0.960364 TTTCTCTCACGCATTGCCCC 60.960 55.000 2.41 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 4.687901 TGTCCACATCGATATGGATTGT 57.312 40.909 27.27 4.07 46.55 2.71
51 53 4.379652 TGTCCACATCGATATGGATTGTG 58.620 43.478 27.27 16.21 46.55 3.33
76 78 5.690857 GCACACCGTATAAGATTCTAAGTCC 59.309 44.000 0.00 0.00 0.00 3.85
162 169 1.142870 AGCCCACTGTAAGCACAAAGA 59.857 47.619 4.34 0.00 37.60 2.52
228 235 8.347004 TGTACATTGCTTTCCATCATTAAAGA 57.653 30.769 0.00 0.00 35.19 2.52
281 291 7.065803 ACTCATATGAGGAACACATTAAAACCG 59.934 37.037 31.19 6.11 46.13 4.44
283 293 7.608376 TCATATGAGGAACACATTAAAACCGAA 59.392 33.333 0.00 0.00 40.71 4.30
305 315 1.580942 CATGTGTGGCTGGAAACGG 59.419 57.895 0.00 0.00 40.79 4.44
318 328 3.031736 TGGAAACGGGGAACAAATCAAA 58.968 40.909 0.00 0.00 0.00 2.69
348 358 0.027586 ACAAATATCTTTCGGCGCGC 59.972 50.000 25.94 25.94 0.00 6.86
352 362 1.498865 ATATCTTTCGGCGCGCCTTG 61.499 55.000 43.60 30.97 0.00 3.61
379 389 1.141645 CGGGTCGACAACAAAATCGA 58.858 50.000 18.91 0.00 44.68 3.59
425 435 8.018677 ACAATAAACAGAACAATAGACGTCTG 57.981 34.615 28.12 14.76 0.00 3.51
469 479 1.378531 TTCTCAAGCCACACACACAC 58.621 50.000 0.00 0.00 0.00 3.82
471 481 0.378257 CTCAAGCCACACACACACAC 59.622 55.000 0.00 0.00 0.00 3.82
473 483 0.179166 CAAGCCACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
516 526 2.087646 GCTCAAGGTGGATTCCTCAAC 58.912 52.381 3.95 0.00 36.74 3.18
523 533 6.012508 TCAAGGTGGATTCCTCAACTAGAAAT 60.013 38.462 3.95 0.00 36.74 2.17
537 547 6.151648 TCAACTAGAAATGGCTGAAATTCCAG 59.848 38.462 0.00 0.00 35.57 3.86
595 605 6.988622 ATAATTGGTGGTGCAAAAATCATG 57.011 33.333 0.00 0.00 0.00 3.07
618 632 3.118261 GGAGGACCATATGAGCACTTCAA 60.118 47.826 3.65 0.00 36.31 2.69
636 650 4.038271 TCAACAGCTGGGAATTCAAGAT 57.962 40.909 19.93 0.00 0.00 2.40
667 681 1.278699 TGCATGCATCCTGTGACTGTA 59.721 47.619 18.46 0.00 0.00 2.74
695 709 2.751806 GCTTATGCTAGATCCCATTGCC 59.248 50.000 0.00 0.00 36.03 4.52
699 713 1.845791 TGCTAGATCCCATTGCCTTGA 59.154 47.619 0.00 0.00 0.00 3.02
740 759 3.353370 TGATCTCATGCCATTGTGTGA 57.647 42.857 0.00 0.00 0.00 3.58
748 767 5.504853 TCATGCCATTGTGTGAGGTAAATA 58.495 37.500 0.00 0.00 0.00 1.40
769 788 0.813184 AAGGGAACAATCATGCTGCG 59.187 50.000 0.00 0.00 0.00 5.18
809 832 4.700365 CACGACAGAGCACGGCGA 62.700 66.667 16.62 0.00 0.00 5.54
824 847 4.241555 CGAGCGGGGCTTATGGCT 62.242 66.667 2.11 0.00 39.88 4.75
868 903 3.557903 ATCCGCACTTGCACTGCCT 62.558 57.895 9.47 0.00 42.21 4.75
872 907 1.630244 CGCACTTGCACTGCCTCTAC 61.630 60.000 9.47 0.00 42.21 2.59
873 908 1.301677 GCACTTGCACTGCCTCTACC 61.302 60.000 4.44 0.00 41.59 3.18
874 909 1.016130 CACTTGCACTGCCTCTACCG 61.016 60.000 0.00 0.00 0.00 4.02
875 910 2.047274 TTGCACTGCCTCTACCGC 60.047 61.111 0.00 0.00 0.00 5.68
876 911 2.513026 CTTGCACTGCCTCTACCGCT 62.513 60.000 0.00 0.00 0.00 5.52
877 912 1.254975 TTGCACTGCCTCTACCGCTA 61.255 55.000 0.00 0.00 0.00 4.26
878 913 1.066587 GCACTGCCTCTACCGCTAG 59.933 63.158 0.00 0.00 0.00 3.42
879 914 1.384989 GCACTGCCTCTACCGCTAGA 61.385 60.000 0.00 0.00 0.00 2.43
880 915 0.382515 CACTGCCTCTACCGCTAGAC 59.617 60.000 0.00 0.00 0.00 2.59
881 916 0.034380 ACTGCCTCTACCGCTAGACA 60.034 55.000 0.00 0.00 0.00 3.41
882 917 0.665835 CTGCCTCTACCGCTAGACAG 59.334 60.000 0.00 0.00 0.00 3.51
883 918 0.034380 TGCCTCTACCGCTAGACAGT 60.034 55.000 0.00 0.00 0.00 3.55
884 919 1.211212 TGCCTCTACCGCTAGACAGTA 59.789 52.381 0.00 0.00 0.00 2.74
885 920 1.874872 GCCTCTACCGCTAGACAGTAG 59.125 57.143 0.00 0.88 35.79 2.57
886 921 2.485124 GCCTCTACCGCTAGACAGTAGA 60.485 54.545 13.25 13.25 40.03 2.59
978 1035 3.694072 CCGATGCCATAAAAAGAGGAACA 59.306 43.478 0.00 0.00 0.00 3.18
1021 1078 2.299326 AAGCAAGCAATCCACCTTCT 57.701 45.000 0.00 0.00 0.00 2.85
1044 1101 1.893801 CCGAGCCGGTTATTATCCTCT 59.106 52.381 1.90 0.00 42.73 3.69
1049 1106 2.903926 CCGGTTATTATCCTCTCCCCT 58.096 52.381 0.00 0.00 0.00 4.79
1050 1107 3.248888 CCGGTTATTATCCTCTCCCCTT 58.751 50.000 0.00 0.00 0.00 3.95
1051 1108 3.261137 CCGGTTATTATCCTCTCCCCTTC 59.739 52.174 0.00 0.00 0.00 3.46
1052 1109 4.161102 CGGTTATTATCCTCTCCCCTTCT 58.839 47.826 0.00 0.00 0.00 2.85
1053 1110 4.221041 CGGTTATTATCCTCTCCCCTTCTC 59.779 50.000 0.00 0.00 0.00 2.87
1054 1111 5.155905 GGTTATTATCCTCTCCCCTTCTCA 58.844 45.833 0.00 0.00 0.00 3.27
1055 1112 5.012251 GGTTATTATCCTCTCCCCTTCTCAC 59.988 48.000 0.00 0.00 0.00 3.51
1056 1113 2.777459 TATCCTCTCCCCTTCTCACC 57.223 55.000 0.00 0.00 0.00 4.02
1057 1114 1.022903 ATCCTCTCCCCTTCTCACCT 58.977 55.000 0.00 0.00 0.00 4.00
1058 1115 0.041833 TCCTCTCCCCTTCTCACCTG 59.958 60.000 0.00 0.00 0.00 4.00
1059 1116 1.621672 CCTCTCCCCTTCTCACCTGC 61.622 65.000 0.00 0.00 0.00 4.85
1060 1117 0.906756 CTCTCCCCTTCTCACCTGCA 60.907 60.000 0.00 0.00 0.00 4.41
1061 1118 0.473694 TCTCCCCTTCTCACCTGCAA 60.474 55.000 0.00 0.00 0.00 4.08
1062 1119 0.035630 CTCCCCTTCTCACCTGCAAG 60.036 60.000 0.00 0.00 0.00 4.01
1063 1120 1.676967 CCCCTTCTCACCTGCAAGC 60.677 63.158 0.00 0.00 0.00 4.01
1064 1121 2.037136 CCCTTCTCACCTGCAAGCG 61.037 63.158 0.00 0.00 0.00 4.68
1065 1122 1.004560 CCTTCTCACCTGCAAGCGA 60.005 57.895 0.00 0.00 0.00 4.93
1066 1123 0.603707 CCTTCTCACCTGCAAGCGAA 60.604 55.000 0.00 0.00 0.00 4.70
1067 1124 0.795085 CTTCTCACCTGCAAGCGAAG 59.205 55.000 0.00 0.00 0.00 3.79
1100 1157 1.903929 CGATTCTCGCTGTCGTTCG 59.096 57.895 0.00 0.00 36.96 3.95
1101 1158 0.793478 CGATTCTCGCTGTCGTTCGT 60.793 55.000 0.00 0.00 36.96 3.85
1102 1159 0.908505 GATTCTCGCTGTCGTTCGTC 59.091 55.000 0.00 0.00 36.96 4.20
1142 1199 0.599558 GGGGGTTGGTTTTACGCTTC 59.400 55.000 0.00 0.00 0.00 3.86
1162 1227 2.353610 GCCCCATGCCTGGTGAAAG 61.354 63.158 7.30 0.00 41.37 2.62
1172 1237 2.369394 CCTGGTGAAAGGCAGTAATCC 58.631 52.381 0.00 0.00 0.00 3.01
1714 1799 2.733593 GTCGTCAGCCGCGTCTTT 60.734 61.111 4.92 0.00 36.19 2.52
2414 2543 7.201821 GCCCTTTCACTTTTGCACATATATACT 60.202 37.037 0.00 0.00 0.00 2.12
2415 2544 8.345565 CCCTTTCACTTTTGCACATATATACTC 58.654 37.037 0.00 0.00 0.00 2.59
2416 2545 8.345565 CCTTTCACTTTTGCACATATATACTCC 58.654 37.037 0.00 0.00 0.00 3.85
2417 2546 7.801716 TTCACTTTTGCACATATATACTCCC 57.198 36.000 0.00 0.00 0.00 4.30
2419 2548 7.217200 TCACTTTTGCACATATATACTCCCTC 58.783 38.462 0.00 0.00 0.00 4.30
2420 2549 6.428159 CACTTTTGCACATATATACTCCCTCC 59.572 42.308 0.00 0.00 0.00 4.30
2421 2550 4.801330 TTGCACATATATACTCCCTCCG 57.199 45.455 0.00 0.00 0.00 4.63
2423 2552 3.762288 TGCACATATATACTCCCTCCGTC 59.238 47.826 0.00 0.00 0.00 4.79
2424 2553 3.130693 GCACATATATACTCCCTCCGTCC 59.869 52.174 0.00 0.00 0.00 4.79
2425 2554 3.377485 CACATATATACTCCCTCCGTCCG 59.623 52.174 0.00 0.00 0.00 4.79
2426 2555 2.795231 TATATACTCCCTCCGTCCGG 57.205 55.000 0.00 0.00 0.00 5.14
2427 2556 1.070604 ATATACTCCCTCCGTCCGGA 58.929 55.000 0.00 0.00 42.90 5.14
2428 2557 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
2429 2558 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2431 2560 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2432 2561 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2433 2562 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2434 2563 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2435 2564 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2436 2565 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2437 2566 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2440 2569 3.055675 TCCGTCCGGAAATACTTGTCATT 60.056 43.478 5.23 0.00 42.05 2.57
2441 2570 3.063452 CCGTCCGGAAATACTTGTCATTG 59.937 47.826 5.23 0.00 37.50 2.82
2442 2571 3.930229 CGTCCGGAAATACTTGTCATTGA 59.070 43.478 5.23 0.00 0.00 2.57
2443 2572 4.390603 CGTCCGGAAATACTTGTCATTGAA 59.609 41.667 5.23 0.00 0.00 2.69
2444 2573 5.106869 CGTCCGGAAATACTTGTCATTGAAA 60.107 40.000 5.23 0.00 0.00 2.69
2445 2574 6.403200 CGTCCGGAAATACTTGTCATTGAAAT 60.403 38.462 5.23 0.00 0.00 2.17
2446 2575 6.747280 GTCCGGAAATACTTGTCATTGAAATG 59.253 38.462 5.23 0.00 37.75 2.32
2447 2576 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
2448 2577 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
2449 2578 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
2450 2579 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
2451 2580 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
2455 2584 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
2457 2586 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
2458 2587 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
2460 2589 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
2461 2590 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
2492 2621 8.682936 AGTTGTAGATACATCCATTTTCATCC 57.317 34.615 0.00 0.00 35.89 3.51
2493 2622 8.274322 AGTTGTAGATACATCCATTTTCATCCA 58.726 33.333 0.00 0.00 35.89 3.41
2494 2623 9.071276 GTTGTAGATACATCCATTTTCATCCAT 57.929 33.333 0.00 0.00 35.89 3.41
2495 2624 9.645128 TTGTAGATACATCCATTTTCATCCATT 57.355 29.630 0.00 0.00 35.89 3.16
2496 2625 9.645128 TGTAGATACATCCATTTTCATCCATTT 57.355 29.630 0.00 0.00 0.00 2.32
2499 2628 9.204337 AGATACATCCATTTTCATCCATTTTGA 57.796 29.630 0.00 0.00 0.00 2.69
2500 2629 9.991906 GATACATCCATTTTCATCCATTTTGAT 57.008 29.630 0.00 0.00 0.00 2.57
2501 2630 9.772973 ATACATCCATTTTCATCCATTTTGATG 57.227 29.630 0.00 0.00 42.84 3.07
2513 2642 8.469200 TCATCCATTTTGATGACAAGTATTTCC 58.531 33.333 0.00 0.00 44.65 3.13
2514 2643 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
2515 2644 6.035843 CCATTTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
2516 2645 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
2517 2646 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2518 2647 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2519 2648 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2520 2649 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2521 2650 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2522 2651 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2523 2652 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2524 2653 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2525 2654 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2606 2739 4.708421 ACTGGTCTCGGTGCTTAGTTTATA 59.292 41.667 0.00 0.00 0.00 0.98
2657 2819 5.641209 ACTACACGTACGATACTTCTTGTCT 59.359 40.000 24.41 0.00 0.00 3.41
2882 3082 1.073548 TGGTTTTACCTGCCCGGAC 59.926 57.895 0.73 0.00 39.58 4.79
2885 3085 1.092348 GTTTTACCTGCCCGGACATC 58.908 55.000 0.73 0.00 36.31 3.06
2927 3129 5.239744 TGTGTTCATGCTTGTTACCGTATTT 59.760 36.000 0.00 0.00 0.00 1.40
2928 3130 6.427242 TGTGTTCATGCTTGTTACCGTATTTA 59.573 34.615 0.00 0.00 0.00 1.40
2929 3131 7.041303 TGTGTTCATGCTTGTTACCGTATTTAA 60.041 33.333 0.00 0.00 0.00 1.52
2930 3132 7.804129 GTGTTCATGCTTGTTACCGTATTTAAA 59.196 33.333 0.00 0.00 0.00 1.52
3150 3480 0.539669 TCAGAGCCAAGAGTCCACGA 60.540 55.000 0.00 0.00 0.00 4.35
3444 4188 6.615088 TGATAAGTTTTGCTTGCTGATCTTC 58.385 36.000 0.00 0.00 38.05 2.87
3452 4196 4.813027 TGCTTGCTGATCTTCCAAATTTC 58.187 39.130 0.00 0.00 0.00 2.17
3454 4198 5.221481 TGCTTGCTGATCTTCCAAATTTCAA 60.221 36.000 0.00 0.00 0.00 2.69
3455 4199 5.873164 GCTTGCTGATCTTCCAAATTTCAAT 59.127 36.000 0.00 0.00 0.00 2.57
3457 4201 7.412672 GCTTGCTGATCTTCCAAATTTCAATTC 60.413 37.037 0.00 0.00 0.00 2.17
3460 4204 7.039574 TGCTGATCTTCCAAATTTCAATTCTCA 60.040 33.333 0.00 0.00 0.00 3.27
3513 4257 5.808366 TGGGTACTAGCCATATTCTTCAG 57.192 43.478 2.64 0.00 41.50 3.02
3514 4258 5.216622 TGGGTACTAGCCATATTCTTCAGT 58.783 41.667 2.64 0.00 41.50 3.41
3515 4259 6.378745 TGGGTACTAGCCATATTCTTCAGTA 58.621 40.000 2.64 0.00 41.50 2.74
3516 4260 6.842280 TGGGTACTAGCCATATTCTTCAGTAA 59.158 38.462 2.64 0.00 41.50 2.24
3517 4261 7.512746 TGGGTACTAGCCATATTCTTCAGTAAT 59.487 37.037 2.64 0.00 41.50 1.89
3518 4262 8.376270 GGGTACTAGCCATATTCTTCAGTAATT 58.624 37.037 0.00 0.00 35.40 1.40
3519 4263 9.425577 GGTACTAGCCATATTCTTCAGTAATTC 57.574 37.037 0.00 0.00 0.00 2.17
3524 4268 8.230472 AGCCATATTCTTCAGTAATTCTTTGG 57.770 34.615 0.00 0.00 0.00 3.28
3525 4269 6.920210 GCCATATTCTTCAGTAATTCTTTGGC 59.080 38.462 0.00 0.00 36.91 4.52
3526 4270 7.201857 GCCATATTCTTCAGTAATTCTTTGGCT 60.202 37.037 0.00 0.00 40.08 4.75
3527 4271 8.348507 CCATATTCTTCAGTAATTCTTTGGCTC 58.651 37.037 0.00 0.00 0.00 4.70
3528 4272 5.862924 TTCTTCAGTAATTCTTTGGCTCG 57.137 39.130 0.00 0.00 0.00 5.03
3529 4273 3.684788 TCTTCAGTAATTCTTTGGCTCGC 59.315 43.478 0.00 0.00 0.00 5.03
3530 4274 3.334583 TCAGTAATTCTTTGGCTCGCT 57.665 42.857 0.00 0.00 0.00 4.93
3531 4275 3.002791 TCAGTAATTCTTTGGCTCGCTG 58.997 45.455 0.00 0.00 0.00 5.18
3532 4276 2.744202 CAGTAATTCTTTGGCTCGCTGT 59.256 45.455 0.00 0.00 0.00 4.40
3533 4277 3.189287 CAGTAATTCTTTGGCTCGCTGTT 59.811 43.478 0.00 0.00 0.00 3.16
3534 4278 3.821033 AGTAATTCTTTGGCTCGCTGTTT 59.179 39.130 0.00 0.00 0.00 2.83
3535 4279 2.712057 ATTCTTTGGCTCGCTGTTTG 57.288 45.000 0.00 0.00 0.00 2.93
3536 4280 1.388547 TTCTTTGGCTCGCTGTTTGT 58.611 45.000 0.00 0.00 0.00 2.83
3537 4281 1.388547 TCTTTGGCTCGCTGTTTGTT 58.611 45.000 0.00 0.00 0.00 2.83
3538 4282 1.333619 TCTTTGGCTCGCTGTTTGTTC 59.666 47.619 0.00 0.00 0.00 3.18
3539 4283 0.383949 TTTGGCTCGCTGTTTGTTCC 59.616 50.000 0.00 0.00 0.00 3.62
3540 4284 0.465460 TTGGCTCGCTGTTTGTTCCT 60.465 50.000 0.00 0.00 0.00 3.36
3541 4285 0.465460 TGGCTCGCTGTTTGTTCCTT 60.465 50.000 0.00 0.00 0.00 3.36
3542 4286 1.202710 TGGCTCGCTGTTTGTTCCTTA 60.203 47.619 0.00 0.00 0.00 2.69
3543 4287 2.084546 GGCTCGCTGTTTGTTCCTTAT 58.915 47.619 0.00 0.00 0.00 1.73
3544 4288 2.096013 GGCTCGCTGTTTGTTCCTTATC 59.904 50.000 0.00 0.00 0.00 1.75
3545 4289 3.003480 GCTCGCTGTTTGTTCCTTATCT 58.997 45.455 0.00 0.00 0.00 1.98
3546 4290 3.181516 GCTCGCTGTTTGTTCCTTATCTG 60.182 47.826 0.00 0.00 0.00 2.90
3547 4291 4.245660 CTCGCTGTTTGTTCCTTATCTGA 58.754 43.478 0.00 0.00 0.00 3.27
3548 4292 4.832248 TCGCTGTTTGTTCCTTATCTGAT 58.168 39.130 0.00 0.00 0.00 2.90
3549 4293 5.972935 TCGCTGTTTGTTCCTTATCTGATA 58.027 37.500 0.00 0.00 0.00 2.15
3550 4294 6.403049 TCGCTGTTTGTTCCTTATCTGATAA 58.597 36.000 9.58 9.58 0.00 1.75
3551 4295 6.535150 TCGCTGTTTGTTCCTTATCTGATAAG 59.465 38.462 24.18 24.18 41.45 1.73
3552 4296 6.313905 CGCTGTTTGTTCCTTATCTGATAAGT 59.686 38.462 27.09 0.00 40.44 2.24
3553 4297 7.148407 CGCTGTTTGTTCCTTATCTGATAAGTT 60.148 37.037 27.09 0.00 40.44 2.66
3554 4298 8.515414 GCTGTTTGTTCCTTATCTGATAAGTTT 58.485 33.333 27.09 0.00 40.44 2.66
3557 4301 9.129209 GTTTGTTCCTTATCTGATAAGTTTTGC 57.871 33.333 27.09 16.39 40.44 3.68
3558 4302 8.635765 TTGTTCCTTATCTGATAAGTTTTGCT 57.364 30.769 27.09 0.00 40.44 3.91
3559 4303 8.635765 TGTTCCTTATCTGATAAGTTTTGCTT 57.364 30.769 27.09 0.00 40.44 3.91
3560 4304 8.514594 TGTTCCTTATCTGATAAGTTTTGCTTG 58.485 33.333 27.09 14.54 40.44 4.01
3561 4305 7.088589 TCCTTATCTGATAAGTTTTGCTTGC 57.911 36.000 27.09 0.00 40.44 4.01
3562 4306 6.886459 TCCTTATCTGATAAGTTTTGCTTGCT 59.114 34.615 27.09 0.00 40.44 3.91
3563 4307 6.971184 CCTTATCTGATAAGTTTTGCTTGCTG 59.029 38.462 27.09 10.46 40.44 4.41
3564 4308 7.148188 CCTTATCTGATAAGTTTTGCTTGCTGA 60.148 37.037 27.09 0.00 40.44 4.26
3565 4309 6.770746 ATCTGATAAGTTTTGCTTGCTGAT 57.229 33.333 0.00 0.00 38.05 2.90
3566 4310 6.187125 TCTGATAAGTTTTGCTTGCTGATC 57.813 37.500 0.00 0.00 38.05 2.92
3567 4311 5.942236 TCTGATAAGTTTTGCTTGCTGATCT 59.058 36.000 0.00 0.00 38.05 2.75
3568 4312 6.432162 TCTGATAAGTTTTGCTTGCTGATCTT 59.568 34.615 0.00 0.00 38.05 2.40
3569 4313 6.615088 TGATAAGTTTTGCTTGCTGATCTTC 58.385 36.000 0.00 0.00 38.05 2.87
3570 4314 3.930634 AGTTTTGCTTGCTGATCTTCC 57.069 42.857 0.00 0.00 0.00 3.46
3571 4315 3.225104 AGTTTTGCTTGCTGATCTTCCA 58.775 40.909 0.00 0.00 0.00 3.53
3572 4316 3.638160 AGTTTTGCTTGCTGATCTTCCAA 59.362 39.130 0.00 0.00 0.00 3.53
3573 4317 4.099881 AGTTTTGCTTGCTGATCTTCCAAA 59.900 37.500 0.00 0.00 0.00 3.28
3607 4351 7.176165 TCTCATATCATTTGATCCTTTGGATGC 59.824 37.037 3.57 0.00 43.27 3.91
3614 4358 1.672881 GATCCTTTGGATGCTCGTTGG 59.327 52.381 3.57 0.00 43.27 3.77
3626 4370 5.178809 GGATGCTCGTTGGTACATTTATACC 59.821 44.000 0.00 0.00 44.39 2.73
3748 4698 2.818432 ACGAGAAAGAGTTAGGCTTCGA 59.182 45.455 6.47 0.00 0.00 3.71
3749 4699 3.255149 ACGAGAAAGAGTTAGGCTTCGAA 59.745 43.478 6.47 0.00 0.00 3.71
3780 4730 4.499019 GCAAAATTTGTTCTCTGACCGGAA 60.499 41.667 9.46 0.00 0.00 4.30
3796 4746 2.301346 CGGAAATTCTAATGCCCAGCT 58.699 47.619 0.00 0.00 0.00 4.24
3824 4774 9.487442 AAATTGGGGTCATAAATGTATTAGTGT 57.513 29.630 0.00 0.00 0.00 3.55
3844 4794 7.336161 AGTGTTATGACTAGCTGTACCTAAG 57.664 40.000 0.00 0.00 0.00 2.18
3845 4795 6.890814 AGTGTTATGACTAGCTGTACCTAAGT 59.109 38.462 0.00 0.00 0.00 2.24
3847 4797 7.488471 GTGTTATGACTAGCTGTACCTAAGTTG 59.512 40.741 0.00 0.00 0.00 3.16
3848 4798 4.451629 TGACTAGCTGTACCTAAGTTGC 57.548 45.455 0.00 0.00 0.00 4.17
3851 4801 0.974383 AGCTGTACCTAAGTTGCCGT 59.026 50.000 0.00 0.00 0.00 5.68
3852 4802 1.067071 AGCTGTACCTAAGTTGCCGTC 60.067 52.381 0.00 0.00 0.00 4.79
3859 4809 1.737793 CCTAAGTTGCCGTCACAATCC 59.262 52.381 0.00 0.00 0.00 3.01
3866 4816 0.387239 GCCGTCACAATCCAAACAGC 60.387 55.000 0.00 0.00 0.00 4.40
3867 4817 0.240945 CCGTCACAATCCAAACAGCC 59.759 55.000 0.00 0.00 0.00 4.85
3868 4818 0.240945 CGTCACAATCCAAACAGCCC 59.759 55.000 0.00 0.00 0.00 5.19
3869 4819 0.603065 GTCACAATCCAAACAGCCCC 59.397 55.000 0.00 0.00 0.00 5.80
3870 4820 0.482446 TCACAATCCAAACAGCCCCT 59.518 50.000 0.00 0.00 0.00 4.79
3871 4821 1.707989 TCACAATCCAAACAGCCCCTA 59.292 47.619 0.00 0.00 0.00 3.53
3872 4822 2.109128 TCACAATCCAAACAGCCCCTAA 59.891 45.455 0.00 0.00 0.00 2.69
3875 4825 2.493278 CAATCCAAACAGCCCCTAAGTG 59.507 50.000 0.00 0.00 0.00 3.16
3877 4827 1.073284 TCCAAACAGCCCCTAAGTGTC 59.927 52.381 0.00 0.00 0.00 3.67
3878 4828 1.073923 CCAAACAGCCCCTAAGTGTCT 59.926 52.381 0.00 0.00 0.00 3.41
3881 4831 4.394729 CAAACAGCCCCTAAGTGTCTAAA 58.605 43.478 0.00 0.00 0.00 1.85
3882 4832 3.983044 ACAGCCCCTAAGTGTCTAAAG 57.017 47.619 0.00 0.00 0.00 1.85
3883 4833 2.027100 ACAGCCCCTAAGTGTCTAAAGC 60.027 50.000 0.00 0.00 0.00 3.51
3884 4834 2.237392 CAGCCCCTAAGTGTCTAAAGCT 59.763 50.000 0.00 0.00 0.00 3.74
3885 4835 2.913617 AGCCCCTAAGTGTCTAAAGCTT 59.086 45.455 0.00 0.00 0.00 3.74
3887 4837 4.162509 AGCCCCTAAGTGTCTAAAGCTTAG 59.837 45.833 0.00 0.00 40.55 2.18
3889 4839 5.128335 GCCCCTAAGTGTCTAAAGCTTAGTA 59.872 44.000 0.00 0.00 39.74 1.82
3890 4840 6.571605 CCCCTAAGTGTCTAAAGCTTAGTAC 58.428 44.000 0.00 0.00 39.74 2.73
3892 4842 7.310237 CCCCTAAGTGTCTAAAGCTTAGTACAA 60.310 40.741 0.00 0.00 39.74 2.41
3893 4843 7.544915 CCCTAAGTGTCTAAAGCTTAGTACAAC 59.455 40.741 0.00 0.00 39.74 3.32
3895 4845 9.694137 CTAAGTGTCTAAAGCTTAGTACAACTT 57.306 33.333 0.00 8.72 37.78 2.66
3896 4846 8.959705 AAGTGTCTAAAGCTTAGTACAACTTT 57.040 30.769 0.00 1.96 36.40 2.66
3897 4847 8.366671 AGTGTCTAAAGCTTAGTACAACTTTG 57.633 34.615 0.00 0.00 34.39 2.77
3898 4848 7.985752 AGTGTCTAAAGCTTAGTACAACTTTGT 59.014 33.333 0.00 0.00 44.86 2.83
3899 4849 9.252962 GTGTCTAAAGCTTAGTACAACTTTGTA 57.747 33.333 0.00 0.00 42.35 2.41
3936 4886 8.934023 ATAAAGTTGAGACACTTATTTTGGGA 57.066 30.769 0.00 0.00 35.87 4.37
3937 4887 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3938 4888 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
3939 4889 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
3940 4890 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
3941 4891 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3942 4892 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3943 4893 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3944 4894 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3945 4895 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4057 5008 0.598065 GCAGCTTGGTGGAATCGTTT 59.402 50.000 1.97 0.00 0.00 3.60
4058 5009 1.666888 GCAGCTTGGTGGAATCGTTTG 60.667 52.381 1.97 0.00 0.00 2.93
4332 5283 8.021973 TCTTTTGAAACGTTTTTAGTACAGCAA 58.978 29.630 15.89 8.30 0.00 3.91
4337 5288 6.858104 AACGTTTTTAGTACAGCAACAAAC 57.142 33.333 0.00 0.00 0.00 2.93
4340 5291 5.795939 CGTTTTTAGTACAGCAACAAACACA 59.204 36.000 0.00 0.00 0.00 3.72
4341 5292 6.470877 CGTTTTTAGTACAGCAACAAACACAT 59.529 34.615 0.00 0.00 0.00 3.21
4345 5296 2.894763 ACAGCAACAAACACATGCAT 57.105 40.000 0.00 0.00 42.45 3.96
4377 5328 9.296400 GCGTGTTAAATACATGGATAATTTTGT 57.704 29.630 0.00 0.00 42.84 2.83
4521 5473 0.539051 AGGAAGCCAGAGGATCAACG 59.461 55.000 0.00 0.00 37.82 4.10
4550 5502 5.131475 TCCTTACCAGGTATTCCCACATTAC 59.869 44.000 0.00 0.00 41.69 1.89
4606 5558 1.416401 TCTGAGCAAAGGTTCCGAGTT 59.584 47.619 0.00 0.00 0.00 3.01
4830 5785 2.366590 AGCTGCCATGATCGTGAAGATA 59.633 45.455 16.77 0.00 40.26 1.98
5281 6239 2.684843 GCGGCACAAGCAGGAAGAG 61.685 63.158 0.00 0.00 44.61 2.85
5509 6467 6.464222 TCTTCCTCGACAACATTGATAAAGT 58.536 36.000 0.00 0.00 0.00 2.66
5788 6755 2.127651 AAGGTGGTAGTTTCCCCTCA 57.872 50.000 0.00 0.00 31.20 3.86
6023 7005 2.060383 CATCGACAGCCTCCTGGGA 61.060 63.158 0.00 0.00 43.53 4.37
6071 7053 1.741993 CGTTCGACTTTGGCAAACTG 58.258 50.000 8.93 2.96 0.00 3.16
6086 7068 0.321653 AACTGGCCAACGACATCCTC 60.322 55.000 7.01 0.00 0.00 3.71
6108 7090 0.601558 GGACCTGAGCAACGTACTCA 59.398 55.000 17.43 17.43 41.78 3.41
6121 7103 1.373570 GTACTCAGCAACATCCTGGC 58.626 55.000 0.00 0.00 0.00 4.85
6278 7260 2.903855 AAGCACAGCAAGCACGCT 60.904 55.556 0.00 0.00 45.21 5.07
6320 7302 4.314440 GCCTGTGAGGACGGCACA 62.314 66.667 0.00 0.00 43.41 4.57
6511 7498 9.262472 GTTGCGAATTAAATAAGTTGTAGTCTG 57.738 33.333 0.00 0.00 0.00 3.51
6527 7514 3.332919 AGTCTGCACTAGTTGATTGCTG 58.667 45.455 0.00 0.00 37.16 4.41
6529 7516 2.038952 TCTGCACTAGTTGATTGCTGGT 59.961 45.455 0.00 0.00 37.16 4.00
6543 7530 5.357314 TGATTGCTGGTAGTCTACACTAGTC 59.643 44.000 12.08 3.68 35.67 2.59
6546 7533 3.309410 GCTGGTAGTCTACACTAGTCGAC 59.691 52.174 7.70 7.70 39.89 4.20
6552 7539 2.350804 GTCTACACTAGTCGACGATGCA 59.649 50.000 10.46 0.00 31.87 3.96
6553 7540 2.350804 TCTACACTAGTCGACGATGCAC 59.649 50.000 10.46 0.00 0.00 4.57
6554 7541 1.166129 ACACTAGTCGACGATGCACT 58.834 50.000 10.46 0.00 0.00 4.40
6712 7699 6.567050 TGTATTACTAGTAAAAGAGCCCGTG 58.433 40.000 18.88 0.00 0.00 4.94
6723 7710 2.355009 GCCCGTGCTTTGCAACAG 60.355 61.111 0.00 1.22 41.47 3.16
6780 7773 7.129622 CACTTGACGCACTTTATTAACTCAAA 58.870 34.615 0.00 0.00 0.00 2.69
6893 7900 2.613977 CGCCAATCTATTAGCCTCCCTG 60.614 54.545 0.00 0.00 0.00 4.45
6907 7914 3.136123 CCTGGGGCAATGCGTGAG 61.136 66.667 0.00 0.00 0.00 3.51
6962 7970 4.202441 AGCAATCCGTCAAAATAGCAGAT 58.798 39.130 0.00 0.00 0.00 2.90
6963 7971 4.274459 AGCAATCCGTCAAAATAGCAGATC 59.726 41.667 0.00 0.00 0.00 2.75
7032 8044 4.329801 CGAATCTGATTCAACAATCACCGA 59.670 41.667 25.32 0.00 42.99 4.69
7123 8135 2.121948 TGGAGATGAGTTAGCAGCCAT 58.878 47.619 0.00 0.00 0.00 4.40
7128 8140 0.894835 TGAGTTAGCAGCCATGACGA 59.105 50.000 0.00 0.00 0.00 4.20
7137 8149 4.175337 CCATGACGACCCCGCCAT 62.175 66.667 0.00 0.00 39.44 4.40
7149 8161 2.735772 CCGCCATAGCCTCACCACT 61.736 63.158 0.00 0.00 34.57 4.00
7155 8167 2.101582 CCATAGCCTCACCACTACTGTC 59.898 54.545 0.00 0.00 0.00 3.51
7268 8281 6.060788 GCAATATCTTCTCTGGTTCCTTCAT 58.939 40.000 0.00 0.00 0.00 2.57
7292 8305 2.973945 AGTGGCTCGACTGAAATTACC 58.026 47.619 0.00 0.00 0.00 2.85
7334 8347 6.202954 GCGAATGCAGTACTTGTAGGATTAAT 59.797 38.462 0.00 0.00 42.15 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 5.128171 ACTTAGAATCTTATACGGTGTGCCA 59.872 40.000 0.00 0.00 34.09 4.92
51 53 5.598769 ACTTAGAATCTTATACGGTGTGCC 58.401 41.667 0.00 0.00 0.00 5.01
62 64 8.337739 ACTTACAGAGAGGGACTTAGAATCTTA 58.662 37.037 0.00 0.00 41.55 2.10
103 105 1.130373 GACAAGTGGTGTGTGTGTGTG 59.870 52.381 0.00 0.00 41.96 3.82
104 106 1.271108 TGACAAGTGGTGTGTGTGTGT 60.271 47.619 0.00 0.00 41.96 3.72
105 107 1.130373 GTGACAAGTGGTGTGTGTGTG 59.870 52.381 0.00 0.00 41.96 3.82
106 108 1.003118 AGTGACAAGTGGTGTGTGTGT 59.997 47.619 0.00 0.00 41.96 3.72
162 169 7.251321 AGAGAGAATCCACTAGAAATGTTGT 57.749 36.000 0.00 0.00 33.66 3.32
281 291 0.889994 TCCAGCCACACATGCATTTC 59.110 50.000 0.00 0.00 0.00 2.17
283 293 1.001181 GTTTCCAGCCACACATGCATT 59.999 47.619 0.00 0.00 0.00 3.56
305 315 5.221422 TGTGTCTCCAATTTGATTTGTTCCC 60.221 40.000 0.00 0.00 0.00 3.97
318 328 6.094048 CCGAAAGATATTTGTGTGTCTCCAAT 59.906 38.462 0.00 0.00 0.00 3.16
348 358 2.438434 GACCCGTGCCATCCAAGG 60.438 66.667 0.00 0.00 42.06 3.61
352 362 3.599285 TTGTCGACCCGTGCCATCC 62.599 63.158 14.12 0.00 0.00 3.51
355 365 2.871216 TTTGTTGTCGACCCGTGCCA 62.871 55.000 14.12 0.00 0.00 4.92
356 366 1.716826 TTTTGTTGTCGACCCGTGCC 61.717 55.000 14.12 0.00 0.00 5.01
379 389 5.242434 TGTTAGGCTTACATCACATTCGTT 58.758 37.500 1.56 0.00 0.00 3.85
492 502 2.044946 AATCCACCTTGAGCGGGC 60.045 61.111 0.00 0.00 0.00 6.13
512 522 6.009589 TGGAATTTCAGCCATTTCTAGTTGA 58.990 36.000 0.00 0.00 0.00 3.18
516 526 6.521151 AACTGGAATTTCAGCCATTTCTAG 57.479 37.500 14.03 0.00 38.26 2.43
523 533 4.646945 TGTTTGTAACTGGAATTTCAGCCA 59.353 37.500 14.03 5.53 38.26 4.75
537 547 4.612033 GCGGTCCAACTACATGTTTGTAAC 60.612 45.833 2.30 4.32 37.86 2.50
581 591 2.094026 GTCCTCCCATGATTTTTGCACC 60.094 50.000 0.00 0.00 0.00 5.01
595 605 1.428869 AGTGCTCATATGGTCCTCCC 58.571 55.000 2.13 0.00 0.00 4.30
618 632 2.309755 TCCATCTTGAATTCCCAGCTGT 59.690 45.455 13.81 0.00 0.00 4.40
636 650 2.674033 GCATGCACACTGCCTCCA 60.674 61.111 14.21 0.00 44.23 3.86
695 709 0.108207 CCCAGCCCTAGATGCTCAAG 59.892 60.000 3.99 0.00 36.81 3.02
699 713 1.124477 GTAGCCCAGCCCTAGATGCT 61.124 60.000 1.32 1.32 40.41 3.79
709 726 2.424557 CATGAGATCATGTAGCCCAGC 58.575 52.381 13.55 0.00 46.40 4.85
733 752 6.183361 TGTTCCCTTCTATTTACCTCACACAA 60.183 38.462 0.00 0.00 0.00 3.33
734 753 5.308497 TGTTCCCTTCTATTTACCTCACACA 59.692 40.000 0.00 0.00 0.00 3.72
735 754 5.801380 TGTTCCCTTCTATTTACCTCACAC 58.199 41.667 0.00 0.00 0.00 3.82
740 759 6.547510 GCATGATTGTTCCCTTCTATTTACCT 59.452 38.462 0.00 0.00 0.00 3.08
748 767 2.097825 GCAGCATGATTGTTCCCTTCT 58.902 47.619 0.00 0.00 39.69 2.85
769 788 2.524204 CCTCCCCATCCTAGCTGCC 61.524 68.421 0.00 0.00 0.00 4.85
809 832 0.257616 TTTTAGCCATAAGCCCCGCT 59.742 50.000 0.00 0.00 45.47 5.52
817 840 5.672194 AGATTCCTCCTCCTTTTAGCCATAA 59.328 40.000 0.00 0.00 0.00 1.90
818 841 5.227593 AGATTCCTCCTCCTTTTAGCCATA 58.772 41.667 0.00 0.00 0.00 2.74
824 847 5.459505 AGATCGAGATTCCTCCTCCTTTTA 58.540 41.667 0.00 0.00 36.04 1.52
872 907 2.085320 ACTGTGTCTACTGTCTAGCGG 58.915 52.381 0.00 0.00 34.34 5.52
873 908 2.484651 ACACTGTGTCTACTGTCTAGCG 59.515 50.000 7.80 0.00 36.93 4.26
874 909 3.253677 ACACACTGTGTCTACTGTCTAGC 59.746 47.826 11.12 0.00 43.92 3.42
875 910 4.515567 TCACACACTGTGTCTACTGTCTAG 59.484 45.833 12.08 0.00 43.92 2.43
876 911 4.275196 GTCACACACTGTGTCTACTGTCTA 59.725 45.833 12.08 0.00 43.92 2.59
877 912 3.066900 GTCACACACTGTGTCTACTGTCT 59.933 47.826 12.08 0.00 43.92 3.41
878 913 3.372954 GTCACACACTGTGTCTACTGTC 58.627 50.000 12.08 0.00 43.92 3.51
879 914 2.223502 CGTCACACACTGTGTCTACTGT 60.224 50.000 12.08 2.69 43.92 3.55
880 915 2.032924 TCGTCACACACTGTGTCTACTG 59.967 50.000 12.08 2.00 43.92 2.74
881 916 2.290916 CTCGTCACACACTGTGTCTACT 59.709 50.000 12.08 0.00 43.92 2.57
882 917 2.604855 CCTCGTCACACACTGTGTCTAC 60.605 54.545 12.08 11.92 43.92 2.59
883 918 1.607148 CCTCGTCACACACTGTGTCTA 59.393 52.381 12.08 1.00 43.92 2.59
884 919 0.385751 CCTCGTCACACACTGTGTCT 59.614 55.000 12.08 0.00 43.92 3.41
885 920 0.597637 CCCTCGTCACACACTGTGTC 60.598 60.000 12.08 1.61 43.92 3.67
928 963 2.292828 AATTTGGTGGAGTGGAGGTG 57.707 50.000 0.00 0.00 0.00 4.00
929 964 2.490902 GGAAATTTGGTGGAGTGGAGGT 60.491 50.000 0.00 0.00 0.00 3.85
930 965 2.171003 GGAAATTTGGTGGAGTGGAGG 58.829 52.381 0.00 0.00 0.00 4.30
931 966 2.171003 GGGAAATTTGGTGGAGTGGAG 58.829 52.381 0.00 0.00 0.00 3.86
932 967 1.203125 GGGGAAATTTGGTGGAGTGGA 60.203 52.381 0.00 0.00 0.00 4.02
933 968 1.266178 GGGGAAATTTGGTGGAGTGG 58.734 55.000 0.00 0.00 0.00 4.00
937 972 1.203125 GGAGTGGGGAAATTTGGTGGA 60.203 52.381 0.00 0.00 0.00 4.02
978 1035 4.467198 AAACCACGACGGATATCTTCTT 57.533 40.909 2.05 0.00 38.63 2.52
1032 1089 5.012251 GGTGAGAAGGGGAGAGGATAATAAC 59.988 48.000 0.00 0.00 0.00 1.89
1042 1099 0.473694 TTGCAGGTGAGAAGGGGAGA 60.474 55.000 0.00 0.00 0.00 3.71
1044 1101 2.069776 CTTGCAGGTGAGAAGGGGA 58.930 57.895 0.00 0.00 0.00 4.81
1049 1106 1.230635 GCTTCGCTTGCAGGTGAGAA 61.231 55.000 12.14 7.58 0.00 2.87
1050 1107 1.669115 GCTTCGCTTGCAGGTGAGA 60.669 57.895 12.14 3.60 0.00 3.27
1051 1108 2.866028 GCTTCGCTTGCAGGTGAG 59.134 61.111 12.14 8.06 0.00 3.51
1052 1109 3.043713 CGCTTCGCTTGCAGGTGA 61.044 61.111 8.15 8.15 0.00 4.02
1053 1110 4.093952 CCGCTTCGCTTGCAGGTG 62.094 66.667 2.41 2.41 0.00 4.00
1054 1111 3.825160 TTCCGCTTCGCTTGCAGGT 62.825 57.895 0.00 0.00 0.00 4.00
1055 1112 2.128853 TTTTCCGCTTCGCTTGCAGG 62.129 55.000 0.00 0.00 0.00 4.85
1056 1113 0.109597 ATTTTCCGCTTCGCTTGCAG 60.110 50.000 0.00 0.00 0.00 4.41
1057 1114 0.109781 GATTTTCCGCTTCGCTTGCA 60.110 50.000 0.00 0.00 0.00 4.08
1058 1115 0.798389 GGATTTTCCGCTTCGCTTGC 60.798 55.000 0.00 0.00 0.00 4.01
1059 1116 0.179163 GGGATTTTCCGCTTCGCTTG 60.179 55.000 0.00 0.00 37.43 4.01
1060 1117 0.608035 TGGGATTTTCCGCTTCGCTT 60.608 50.000 0.00 0.00 37.43 4.68
1061 1118 0.608035 TTGGGATTTTCCGCTTCGCT 60.608 50.000 0.00 0.00 37.43 4.93
1062 1119 0.179163 CTTGGGATTTTCCGCTTCGC 60.179 55.000 0.00 0.00 37.43 4.70
1063 1120 0.179163 GCTTGGGATTTTCCGCTTCG 60.179 55.000 0.00 0.00 37.43 3.79
1064 1121 0.179163 CGCTTGGGATTTTCCGCTTC 60.179 55.000 0.00 0.00 37.43 3.86
1065 1122 0.608035 TCGCTTGGGATTTTCCGCTT 60.608 50.000 0.00 0.00 37.43 4.68
1066 1123 0.394352 ATCGCTTGGGATTTTCCGCT 60.394 50.000 0.00 0.00 37.43 5.52
1067 1124 0.455815 AATCGCTTGGGATTTTCCGC 59.544 50.000 7.03 0.00 37.43 5.54
1126 1183 3.759550 CGGAAGCGTAAAACCAACC 57.240 52.632 0.00 0.00 0.00 3.77
1154 1219 1.707989 TGGGATTACTGCCTTTCACCA 59.292 47.619 0.00 0.00 33.13 4.17
1164 1229 0.465097 CTGGCTGGCTGGGATTACTG 60.465 60.000 2.00 0.00 0.00 2.74
1166 1231 1.152881 CCTGGCTGGCTGGGATTAC 60.153 63.158 17.79 0.00 0.00 1.89
1169 1234 3.415087 GACCTGGCTGGCTGGGAT 61.415 66.667 26.60 10.46 40.22 3.85
1172 1237 4.729918 GTGGACCTGGCTGGCTGG 62.730 72.222 22.70 22.70 40.22 4.85
2414 2543 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2415 2544 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2416 2545 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2417 2546 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2419 2548 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2420 2549 3.930229 TCAATGACAAGTATTTCCGGACG 59.070 43.478 1.83 0.00 0.00 4.79
2421 2550 5.873179 TTCAATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 0.00 4.79
2423 2552 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
2424 2553 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
2425 2554 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
2429 2558 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
2431 2560 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
2432 2561 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
2434 2563 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
2435 2564 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
2466 2595 9.778741 GGATGAAAATGGATGTATCTACAACTA 57.221 33.333 0.00 0.00 39.99 2.24
2467 2596 8.274322 TGGATGAAAATGGATGTATCTACAACT 58.726 33.333 0.00 0.00 39.99 3.16
2468 2597 8.450578 TGGATGAAAATGGATGTATCTACAAC 57.549 34.615 0.00 0.00 39.99 3.32
2469 2598 9.645128 AATGGATGAAAATGGATGTATCTACAA 57.355 29.630 0.00 0.00 39.99 2.41
2470 2599 9.645128 AAATGGATGAAAATGGATGTATCTACA 57.355 29.630 0.00 0.00 40.98 2.74
2473 2602 9.204337 TCAAAATGGATGAAAATGGATGTATCT 57.796 29.630 0.00 0.00 0.00 1.98
2474 2603 9.991906 ATCAAAATGGATGAAAATGGATGTATC 57.008 29.630 0.00 0.00 0.00 2.24
2475 2604 9.772973 CATCAAAATGGATGAAAATGGATGTAT 57.227 29.630 0.00 0.00 46.00 2.29
2488 2617 7.433131 CGGAAATACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
2489 2618 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
2490 2619 6.127758 CCGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
2491 2620 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
2492 2621 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2493 2622 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2494 2623 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2495 2624 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2496 2625 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2497 2626 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2498 2627 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2499 2628 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2500 2629 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2501 2630 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2502 2631 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2503 2632 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2504 2633 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2505 2634 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2506 2635 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2507 2636 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2508 2637 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2509 2638 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2510 2639 0.466922 GATACTCCCTCCGTCCGGAA 60.467 60.000 5.23 0.00 44.66 4.30
2511 2640 1.150081 GATACTCCCTCCGTCCGGA 59.850 63.158 0.00 0.00 42.90 5.14
2512 2641 0.467659 AAGATACTCCCTCCGTCCGG 60.468 60.000 0.00 0.00 0.00 5.14
2513 2642 1.337387 GAAAGATACTCCCTCCGTCCG 59.663 57.143 0.00 0.00 0.00 4.79
2514 2643 2.385803 TGAAAGATACTCCCTCCGTCC 58.614 52.381 0.00 0.00 0.00 4.79
2515 2644 4.828387 ACTATGAAAGATACTCCCTCCGTC 59.172 45.833 0.00 0.00 0.00 4.79
2516 2645 4.805744 ACTATGAAAGATACTCCCTCCGT 58.194 43.478 0.00 0.00 0.00 4.69
2517 2646 6.896021 TTACTATGAAAGATACTCCCTCCG 57.104 41.667 0.00 0.00 0.00 4.63
2518 2647 8.652290 ACAATTACTATGAAAGATACTCCCTCC 58.348 37.037 0.00 0.00 0.00 4.30
2606 2739 6.995511 TTCGAATTAAGAAACATCCGGATT 57.004 33.333 16.19 0.00 0.00 3.01
2647 2809 6.249951 ACTAGTAGGTCATCAGACAAGAAGT 58.750 40.000 1.45 0.00 46.80 3.01
2657 2819 9.064706 GCATAAACTACTACTAGTAGGTCATCA 57.935 37.037 29.05 13.43 45.06 3.07
2827 3024 5.354513 GGCAGGAGAAAATGGTTCTACTAAC 59.645 44.000 0.53 0.00 37.62 2.34
2882 3082 4.876107 ACATTGACCGCTTAAGTAAGGATG 59.124 41.667 16.82 12.94 33.95 3.51
2885 3085 4.000988 ACACATTGACCGCTTAAGTAAGG 58.999 43.478 4.02 8.11 33.95 2.69
2928 3130 8.015658 GCTTCAGTTTGACGTACTTCATAATTT 58.984 33.333 2.52 0.00 0.00 1.82
2929 3131 7.387948 AGCTTCAGTTTGACGTACTTCATAATT 59.612 33.333 2.52 0.00 0.00 1.40
2930 3132 6.874134 AGCTTCAGTTTGACGTACTTCATAAT 59.126 34.615 2.52 0.00 0.00 1.28
3107 3437 5.838521 ACCAGTACAACCCAAATCATCTTTT 59.161 36.000 0.00 0.00 0.00 2.27
3395 4133 0.383949 GGAACAAACAGCGAGCCAAA 59.616 50.000 0.00 0.00 0.00 3.28
3477 4221 9.702253 TGGCTAGTACCCATCAAATAAAATTAA 57.298 29.630 0.00 0.00 0.00 1.40
3478 4222 9.875708 ATGGCTAGTACCCATCAAATAAAATTA 57.124 29.630 0.00 0.00 38.71 1.40
3479 4223 8.782137 ATGGCTAGTACCCATCAAATAAAATT 57.218 30.769 0.00 0.00 38.71 1.82
3481 4225 9.875708 AATATGGCTAGTACCCATCAAATAAAA 57.124 29.630 5.51 0.00 41.97 1.52
3482 4226 9.515226 GAATATGGCTAGTACCCATCAAATAAA 57.485 33.333 5.51 0.00 41.97 1.40
3483 4227 8.890472 AGAATATGGCTAGTACCCATCAAATAA 58.110 33.333 5.51 0.00 41.97 1.40
3484 4228 8.449423 AGAATATGGCTAGTACCCATCAAATA 57.551 34.615 5.51 0.00 41.97 1.40
3485 4229 7.335127 AGAATATGGCTAGTACCCATCAAAT 57.665 36.000 5.51 0.00 41.97 2.32
3486 4230 6.763715 AGAATATGGCTAGTACCCATCAAA 57.236 37.500 5.51 0.00 41.97 2.69
3487 4231 6.328934 TGAAGAATATGGCTAGTACCCATCAA 59.671 38.462 5.51 0.00 41.97 2.57
3488 4232 5.843969 TGAAGAATATGGCTAGTACCCATCA 59.156 40.000 5.51 0.00 41.97 3.07
3489 4233 6.014156 ACTGAAGAATATGGCTAGTACCCATC 60.014 42.308 5.51 0.00 41.97 3.51
3490 4234 5.846714 ACTGAAGAATATGGCTAGTACCCAT 59.153 40.000 7.23 7.23 44.85 4.00
3491 4235 5.216622 ACTGAAGAATATGGCTAGTACCCA 58.783 41.667 0.00 0.00 36.66 4.51
3492 4236 5.810080 ACTGAAGAATATGGCTAGTACCC 57.190 43.478 0.00 0.00 0.00 3.69
3493 4237 9.425577 GAATTACTGAAGAATATGGCTAGTACC 57.574 37.037 0.00 0.00 0.00 3.34
3498 4242 9.342308 CCAAAGAATTACTGAAGAATATGGCTA 57.658 33.333 0.00 0.00 0.00 3.93
3499 4243 7.201857 GCCAAAGAATTACTGAAGAATATGGCT 60.202 37.037 0.00 0.00 42.75 4.75
3500 4244 6.920210 GCCAAAGAATTACTGAAGAATATGGC 59.080 38.462 0.00 0.00 40.08 4.40
3501 4245 8.230472 AGCCAAAGAATTACTGAAGAATATGG 57.770 34.615 0.00 0.00 0.00 2.74
3502 4246 8.066595 CGAGCCAAAGAATTACTGAAGAATATG 58.933 37.037 0.00 0.00 0.00 1.78
3503 4247 7.254932 GCGAGCCAAAGAATTACTGAAGAATAT 60.255 37.037 0.00 0.00 0.00 1.28
3504 4248 6.037172 GCGAGCCAAAGAATTACTGAAGAATA 59.963 38.462 0.00 0.00 0.00 1.75
3505 4249 5.163713 GCGAGCCAAAGAATTACTGAAGAAT 60.164 40.000 0.00 0.00 0.00 2.40
3506 4250 4.154195 GCGAGCCAAAGAATTACTGAAGAA 59.846 41.667 0.00 0.00 0.00 2.52
3507 4251 3.684788 GCGAGCCAAAGAATTACTGAAGA 59.315 43.478 0.00 0.00 0.00 2.87
3508 4252 3.686726 AGCGAGCCAAAGAATTACTGAAG 59.313 43.478 0.00 0.00 0.00 3.02
3509 4253 3.436704 CAGCGAGCCAAAGAATTACTGAA 59.563 43.478 0.00 0.00 0.00 3.02
3510 4254 3.002791 CAGCGAGCCAAAGAATTACTGA 58.997 45.455 0.00 0.00 0.00 3.41
3511 4255 2.744202 ACAGCGAGCCAAAGAATTACTG 59.256 45.455 0.00 0.00 0.00 2.74
3512 4256 3.059352 ACAGCGAGCCAAAGAATTACT 57.941 42.857 0.00 0.00 0.00 2.24
3513 4257 3.831715 AACAGCGAGCCAAAGAATTAC 57.168 42.857 0.00 0.00 0.00 1.89
3514 4258 3.568007 ACAAACAGCGAGCCAAAGAATTA 59.432 39.130 0.00 0.00 0.00 1.40
3515 4259 2.362077 ACAAACAGCGAGCCAAAGAATT 59.638 40.909 0.00 0.00 0.00 2.17
3516 4260 1.956477 ACAAACAGCGAGCCAAAGAAT 59.044 42.857 0.00 0.00 0.00 2.40
3517 4261 1.388547 ACAAACAGCGAGCCAAAGAA 58.611 45.000 0.00 0.00 0.00 2.52
3518 4262 1.333619 GAACAAACAGCGAGCCAAAGA 59.666 47.619 0.00 0.00 0.00 2.52
3519 4263 1.600413 GGAACAAACAGCGAGCCAAAG 60.600 52.381 0.00 0.00 0.00 2.77
3520 4264 0.383949 GGAACAAACAGCGAGCCAAA 59.616 50.000 0.00 0.00 0.00 3.28
3521 4265 0.465460 AGGAACAAACAGCGAGCCAA 60.465 50.000 0.00 0.00 0.00 4.52
3522 4266 0.465460 AAGGAACAAACAGCGAGCCA 60.465 50.000 0.00 0.00 0.00 4.75
3523 4267 1.519408 TAAGGAACAAACAGCGAGCC 58.481 50.000 0.00 0.00 0.00 4.70
3524 4268 3.003480 AGATAAGGAACAAACAGCGAGC 58.997 45.455 0.00 0.00 0.00 5.03
3525 4269 4.245660 TCAGATAAGGAACAAACAGCGAG 58.754 43.478 0.00 0.00 0.00 5.03
3526 4270 4.265904 TCAGATAAGGAACAAACAGCGA 57.734 40.909 0.00 0.00 0.00 4.93
3527 4271 6.313905 ACTTATCAGATAAGGAACAAACAGCG 59.686 38.462 27.11 5.67 45.05 5.18
3528 4272 7.617041 ACTTATCAGATAAGGAACAAACAGC 57.383 36.000 27.11 0.00 45.05 4.40
3531 4275 9.129209 GCAAAACTTATCAGATAAGGAACAAAC 57.871 33.333 27.11 11.51 45.05 2.93
3532 4276 9.077885 AGCAAAACTTATCAGATAAGGAACAAA 57.922 29.630 27.11 0.00 45.05 2.83
3533 4277 8.635765 AGCAAAACTTATCAGATAAGGAACAA 57.364 30.769 27.11 0.00 45.05 2.83
3534 4278 8.514594 CAAGCAAAACTTATCAGATAAGGAACA 58.485 33.333 27.11 0.00 45.05 3.18
3535 4279 7.486232 GCAAGCAAAACTTATCAGATAAGGAAC 59.514 37.037 27.11 15.03 45.05 3.62
3536 4280 7.394359 AGCAAGCAAAACTTATCAGATAAGGAA 59.606 33.333 27.11 0.00 45.05 3.36
3537 4281 6.886459 AGCAAGCAAAACTTATCAGATAAGGA 59.114 34.615 27.11 0.00 45.05 3.36
3538 4282 6.971184 CAGCAAGCAAAACTTATCAGATAAGG 59.029 38.462 27.11 14.49 45.05 2.69
3539 4283 7.755591 TCAGCAAGCAAAACTTATCAGATAAG 58.244 34.615 23.60 23.60 45.97 1.73
3540 4284 7.686438 TCAGCAAGCAAAACTTATCAGATAA 57.314 32.000 2.77 2.77 36.04 1.75
3541 4285 7.772292 AGATCAGCAAGCAAAACTTATCAGATA 59.228 33.333 0.00 0.00 36.04 1.98
3542 4286 6.602406 AGATCAGCAAGCAAAACTTATCAGAT 59.398 34.615 0.00 0.00 36.04 2.90
3543 4287 5.942236 AGATCAGCAAGCAAAACTTATCAGA 59.058 36.000 0.00 0.00 36.04 3.27
3544 4288 6.192234 AGATCAGCAAGCAAAACTTATCAG 57.808 37.500 0.00 0.00 36.04 2.90
3545 4289 6.349611 GGAAGATCAGCAAGCAAAACTTATCA 60.350 38.462 0.00 0.00 36.04 2.15
3546 4290 6.032717 GGAAGATCAGCAAGCAAAACTTATC 58.967 40.000 0.00 0.00 36.04 1.75
3547 4291 5.477984 TGGAAGATCAGCAAGCAAAACTTAT 59.522 36.000 0.00 0.00 36.04 1.73
3548 4292 4.826733 TGGAAGATCAGCAAGCAAAACTTA 59.173 37.500 0.00 0.00 36.04 2.24
3549 4293 3.638160 TGGAAGATCAGCAAGCAAAACTT 59.362 39.130 0.00 0.00 40.05 2.66
3550 4294 3.225104 TGGAAGATCAGCAAGCAAAACT 58.775 40.909 0.00 0.00 0.00 2.66
3551 4295 3.648339 TGGAAGATCAGCAAGCAAAAC 57.352 42.857 0.00 0.00 0.00 2.43
3552 4296 4.669206 TTTGGAAGATCAGCAAGCAAAA 57.331 36.364 0.00 0.00 0.00 2.44
3553 4297 4.877378 ATTTGGAAGATCAGCAAGCAAA 57.123 36.364 0.00 0.00 0.00 3.68
3554 4298 4.877378 AATTTGGAAGATCAGCAAGCAA 57.123 36.364 0.00 0.00 0.00 3.91
3555 4299 4.281435 TGAAATTTGGAAGATCAGCAAGCA 59.719 37.500 0.00 0.00 0.00 3.91
3556 4300 4.813027 TGAAATTTGGAAGATCAGCAAGC 58.187 39.130 0.00 0.00 0.00 4.01
3557 4301 7.817962 AGAATTGAAATTTGGAAGATCAGCAAG 59.182 33.333 0.00 0.00 0.00 4.01
3558 4302 7.673180 AGAATTGAAATTTGGAAGATCAGCAA 58.327 30.769 0.00 0.00 0.00 3.91
3559 4303 7.039574 TGAGAATTGAAATTTGGAAGATCAGCA 60.040 33.333 0.00 0.00 0.00 4.41
3560 4304 7.318141 TGAGAATTGAAATTTGGAAGATCAGC 58.682 34.615 0.00 0.00 0.00 4.26
3748 4698 6.643770 CAGAGAACAAATTTTGCTGCACTATT 59.356 34.615 0.00 2.01 0.00 1.73
3749 4699 6.016024 TCAGAGAACAAATTTTGCTGCACTAT 60.016 34.615 0.00 0.00 0.00 2.12
3780 4730 6.408434 CCCAATTTTAGCTGGGCATTAGAATT 60.408 38.462 0.00 0.00 45.80 2.17
3824 4774 6.406624 GGCAACTTAGGTACAGCTAGTCATAA 60.407 42.308 0.00 0.00 0.00 1.90
3844 4794 1.066303 TGTTTGGATTGTGACGGCAAC 59.934 47.619 0.00 0.00 0.00 4.17
3845 4795 1.336440 CTGTTTGGATTGTGACGGCAA 59.664 47.619 0.00 0.00 0.00 4.52
3847 4797 0.387239 GCTGTTTGGATTGTGACGGC 60.387 55.000 0.00 0.00 37.25 5.68
3848 4798 0.240945 GGCTGTTTGGATTGTGACGG 59.759 55.000 0.00 0.00 0.00 4.79
3851 4801 0.482446 AGGGGCTGTTTGGATTGTGA 59.518 50.000 0.00 0.00 0.00 3.58
3852 4802 2.214376 TAGGGGCTGTTTGGATTGTG 57.786 50.000 0.00 0.00 0.00 3.33
3859 4809 2.568623 AGACACTTAGGGGCTGTTTG 57.431 50.000 0.00 0.00 0.00 2.93
3866 4816 5.678955 ACTAAGCTTTAGACACTTAGGGG 57.321 43.478 3.20 0.00 44.60 4.79
3867 4817 7.166691 TGTACTAAGCTTTAGACACTTAGGG 57.833 40.000 3.20 0.00 44.60 3.53
3868 4818 8.305317 AGTTGTACTAAGCTTTAGACACTTAGG 58.695 37.037 3.20 0.00 44.60 2.69
3869 4819 9.694137 AAGTTGTACTAAGCTTTAGACACTTAG 57.306 33.333 3.20 7.32 45.40 2.18
3871 4821 8.827677 CAAAGTTGTACTAAGCTTTAGACACTT 58.172 33.333 3.20 9.44 30.98 3.16
3872 4822 7.985752 ACAAAGTTGTACTAAGCTTTAGACACT 59.014 33.333 3.20 4.38 40.16 3.55
3911 4861 8.793592 GTCCCAAAATAAGTGTCTCAACTTTAT 58.206 33.333 0.00 0.00 40.77 1.40
3912 4862 7.041644 CGTCCCAAAATAAGTGTCTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
3913 4863 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3914 4864 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3915 4865 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3916 4866 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3917 4867 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3918 4868 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
3919 4869 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3920 4870 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3921 4871 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3922 4872 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3923 4873 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3924 4874 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3925 4875 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3926 4876 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3927 4877 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3928 4878 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3929 4879 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
3930 4880 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3931 4881 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
3932 4882 0.324091 GAACTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
3933 4883 0.324091 TGAACTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
3934 4884 1.777941 ATGAACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3935 4885 2.496470 ACAATGAACTACTCCCTCCGTC 59.504 50.000 0.00 0.00 0.00 4.79
3936 4886 2.537143 ACAATGAACTACTCCCTCCGT 58.463 47.619 0.00 0.00 0.00 4.69
3937 4887 3.700038 AGTACAATGAACTACTCCCTCCG 59.300 47.826 0.00 0.00 0.00 4.63
3938 4888 5.420409 CAAGTACAATGAACTACTCCCTCC 58.580 45.833 0.00 0.00 0.00 4.30
3939 4889 5.046520 ACCAAGTACAATGAACTACTCCCTC 60.047 44.000 0.00 0.00 0.00 4.30
3940 4890 4.844655 ACCAAGTACAATGAACTACTCCCT 59.155 41.667 0.00 0.00 0.00 4.20
3941 4891 5.046520 AGACCAAGTACAATGAACTACTCCC 60.047 44.000 0.00 0.00 0.00 4.30
3942 4892 5.869888 CAGACCAAGTACAATGAACTACTCC 59.130 44.000 0.00 0.00 0.00 3.85
3943 4893 5.869888 CCAGACCAAGTACAATGAACTACTC 59.130 44.000 0.00 0.00 0.00 2.59
3944 4894 5.794894 CCAGACCAAGTACAATGAACTACT 58.205 41.667 0.00 0.00 0.00 2.57
3945 4895 4.392138 GCCAGACCAAGTACAATGAACTAC 59.608 45.833 0.00 0.00 0.00 2.73
4057 5008 3.020984 GACAAGTCCACCAAAAGGAACA 58.979 45.455 0.00 0.00 36.80 3.18
4058 5009 3.020984 TGACAAGTCCACCAAAAGGAAC 58.979 45.455 0.00 0.00 36.80 3.62
4332 5283 1.870580 GCTGTGCATGCATGTGTTTGT 60.871 47.619 25.64 0.00 0.00 2.83
4337 5288 1.799916 CACGCTGTGCATGCATGTG 60.800 57.895 25.64 25.43 0.00 3.21
4340 5291 0.880441 TTAACACGCTGTGCATGCAT 59.120 45.000 25.64 7.59 36.98 3.96
4341 5292 0.665298 TTTAACACGCTGTGCATGCA 59.335 45.000 18.46 18.46 36.98 3.96
4345 5296 3.120025 CCATGTATTTAACACGCTGTGCA 60.120 43.478 8.31 0.00 42.09 4.57
4377 5328 7.551262 ACTGCACGTTTTTATACCAATGAGATA 59.449 33.333 0.00 0.00 0.00 1.98
4395 5346 2.477863 GCACTGAAGAAAAACTGCACGT 60.478 45.455 0.00 0.00 29.89 4.49
4396 5347 2.111756 GCACTGAAGAAAAACTGCACG 58.888 47.619 0.00 0.00 29.89 5.34
4550 5502 1.670811 GTGTCAACAGGAACACCAGTG 59.329 52.381 0.00 0.00 0.00 3.66
4606 5558 2.781174 ACCTCCCTTTGAAGTGTAACCA 59.219 45.455 0.00 0.00 37.80 3.67
5281 6239 2.548057 TGAAAACTGAACCAGATGTCGC 59.452 45.455 0.45 0.00 35.18 5.19
5509 6467 1.699083 TGTCCTGAATGAGGCAGTCAA 59.301 47.619 0.00 0.00 42.47 3.18
5788 6755 2.301346 CAGAAGCCTGAAGTTTGGTGT 58.699 47.619 0.00 0.00 43.02 4.16
5970 6943 2.885676 CGTTGCTGCTGCTGTCGTT 61.886 57.895 17.00 0.00 40.48 3.85
6023 7005 0.806102 CGATCGCTCCGTCAACCAAT 60.806 55.000 0.26 0.00 0.00 3.16
6071 7053 1.450312 CTGGAGGATGTCGTTGGCC 60.450 63.158 0.00 0.00 0.00 5.36
6086 7068 0.389948 GTACGTTGCTCAGGTCCTGG 60.390 60.000 19.11 10.61 31.51 4.45
6108 7090 2.270205 CGAGGCCAGGATGTTGCT 59.730 61.111 5.01 0.00 0.00 3.91
6527 7514 3.775202 TCGTCGACTAGTGTAGACTACC 58.225 50.000 14.70 2.05 43.53 3.18
6529 7516 3.801050 GCATCGTCGACTAGTGTAGACTA 59.199 47.826 14.70 0.00 43.53 2.59
6552 7539 4.744795 ATTGATCGAAGAAGGCAGTAGT 57.255 40.909 0.00 0.00 43.58 2.73
6630 7617 8.896744 GCAGCACCACATATACAATCATTATAT 58.103 33.333 0.00 0.00 0.00 0.86
6707 7694 2.133742 CTCCTGTTGCAAAGCACGGG 62.134 60.000 0.00 3.90 38.71 5.28
6709 7696 0.662619 TTCTCCTGTTGCAAAGCACG 59.337 50.000 0.00 0.00 38.71 5.34
6734 7721 4.945543 GTGGATTTCCCCTAAATAACGTGT 59.054 41.667 0.00 0.00 37.93 4.49
6735 7722 5.190677 AGTGGATTTCCCCTAAATAACGTG 58.809 41.667 0.00 0.00 37.93 4.49
6737 7724 5.883673 TCAAGTGGATTTCCCCTAAATAACG 59.116 40.000 0.00 0.00 37.93 3.18
6738 7725 6.183360 CGTCAAGTGGATTTCCCCTAAATAAC 60.183 42.308 0.00 0.00 37.93 1.89
6741 7733 4.270008 CGTCAAGTGGATTTCCCCTAAAT 58.730 43.478 0.00 0.00 40.59 1.40
6753 7745 5.302360 AGTTAATAAAGTGCGTCAAGTGGA 58.698 37.500 0.00 0.00 0.00 4.02
6761 7753 8.349983 ACTTTGATTTGAGTTAATAAAGTGCGT 58.650 29.630 0.00 0.00 36.06 5.24
6794 7799 4.214993 TCCCCCTGGGTTTTTATTTTCA 57.785 40.909 12.71 0.00 44.74 2.69
6893 7900 0.960364 TTTCTCTCACGCATTGCCCC 60.960 55.000 2.41 0.00 0.00 5.80
6907 7914 6.212955 GCTCTCTGTATAGGTGATGTTTCTC 58.787 44.000 0.00 0.00 0.00 2.87
6962 7970 4.940654 TGGTGTGATTGAAATATGAAGCGA 59.059 37.500 0.00 0.00 0.00 4.93
6963 7971 5.233957 TGGTGTGATTGAAATATGAAGCG 57.766 39.130 0.00 0.00 0.00 4.68
6967 7979 6.527057 TGCAATGGTGTGATTGAAATATGA 57.473 33.333 0.00 0.00 35.65 2.15
7032 8044 3.593442 TGGAAGACCTTGGTTGTCAAT 57.407 42.857 0.00 0.00 35.15 2.57
7128 8140 3.480133 GTGAGGCTATGGCGGGGT 61.480 66.667 0.00 0.00 39.81 4.95
7137 8149 2.724454 GAGACAGTAGTGGTGAGGCTA 58.276 52.381 1.92 0.00 0.00 3.93
7149 8161 1.813178 CTGCTGTTCTCCGAGACAGTA 59.187 52.381 20.06 16.97 30.96 2.74
7155 8167 2.099431 GCAGCTGCTGTTCTCCGAG 61.099 63.158 31.33 2.55 38.21 4.63
7232 8244 6.383726 AGAGAAGATATTGCAGAAGAACCTCT 59.616 38.462 0.00 0.00 0.00 3.69
7239 8251 5.526846 GGAACCAGAGAAGATATTGCAGAAG 59.473 44.000 0.00 0.00 0.00 2.85
7240 8252 5.190528 AGGAACCAGAGAAGATATTGCAGAA 59.809 40.000 0.00 0.00 0.00 3.02
7244 8256 5.431765 TGAAGGAACCAGAGAAGATATTGC 58.568 41.667 0.00 0.00 0.00 3.56
7245 8257 9.790344 AATATGAAGGAACCAGAGAAGATATTG 57.210 33.333 0.00 0.00 0.00 1.90
7250 8262 7.147655 CCACTAATATGAAGGAACCAGAGAAGA 60.148 40.741 0.00 0.00 0.00 2.87
7268 8281 6.097839 AGGTAATTTCAGTCGAGCCACTAATA 59.902 38.462 0.00 0.00 0.00 0.98
7292 8305 1.202568 TCGCTATCCTGGCAATCACAG 60.203 52.381 0.00 0.00 35.74 3.66
7334 8347 5.261216 AGTTTGTGAAGGGAGAAAAAGTCA 58.739 37.500 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.