Multiple sequence alignment - TraesCS5B01G150700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G150700 chr5B 100.000 4516 0 0 1 4516 278449967 278445452 0.000000e+00 8340.0
1 TraesCS5B01G150700 chr5B 89.264 326 31 4 4193 4516 518233442 518233765 5.440000e-109 405.0
2 TraesCS5B01G150700 chr5B 91.124 169 9 5 1791 1958 417342316 417342479 1.630000e-54 224.0
3 TraesCS5B01G150700 chr5B 86.154 65 2 3 3896 3953 132606098 132606162 3.770000e-06 63.9
4 TraesCS5B01G150700 chr5D 93.681 3909 147 38 1 3860 245190397 245186540 0.000000e+00 5758.0
5 TraesCS5B01G150700 chr5D 87.847 288 32 3 4196 4482 387962491 387962776 7.240000e-88 335.0
6 TraesCS5B01G150700 chr5D 86.364 198 18 6 3951 4147 245186537 245186348 1.650000e-49 207.0
7 TraesCS5B01G150700 chr5D 88.542 96 4 3 3862 3950 134782205 134782110 4.780000e-20 110.0
8 TraesCS5B01G150700 chr5D 84.848 99 4 7 3862 3951 332584392 332584296 6.220000e-14 89.8
9 TraesCS5B01G150700 chr5A 95.160 2004 66 8 1868 3860 329225188 329223205 0.000000e+00 3134.0
10 TraesCS5B01G150700 chr5A 90.946 1723 91 24 1 1681 329226986 329225287 0.000000e+00 2257.0
11 TraesCS5B01G150700 chr5A 90.547 201 10 6 3954 4147 329223199 329223001 1.610000e-64 257.0
12 TraesCS5B01G150700 chr2A 92.473 837 38 7 772 1590 277333293 277334122 0.000000e+00 1173.0
13 TraesCS5B01G150700 chr2A 90.087 343 18 8 201 538 277332966 277333297 8.970000e-117 431.0
14 TraesCS5B01G150700 chr2A 86.306 314 24 14 1645 1956 277334131 277334427 1.570000e-84 324.0
15 TraesCS5B01G150700 chr7D 93.400 803 32 16 1157 1958 99932192 99932974 0.000000e+00 1170.0
16 TraesCS5B01G150700 chr7D 91.878 394 16 3 201 589 99931812 99932194 1.850000e-148 536.0
17 TraesCS5B01G150700 chr7D 91.892 74 6 0 3862 3935 490900690 490900617 2.220000e-18 104.0
18 TraesCS5B01G150700 chr7D 90.909 77 4 1 3862 3935 237270711 237270787 2.870000e-17 100.0
19 TraesCS5B01G150700 chr7D 85.567 97 7 3 3862 3951 395073765 395073669 1.340000e-15 95.3
20 TraesCS5B01G150700 chr7D 82.828 99 6 8 3862 3951 563665356 563665260 1.350000e-10 78.7
21 TraesCS5B01G150700 chr3D 93.035 804 36 15 1157 1958 528821303 528822088 0.000000e+00 1157.0
22 TraesCS5B01G150700 chr3D 94.258 209 7 2 201 404 528820614 528820822 9.430000e-82 315.0
23 TraesCS5B01G150700 chr3D 82.831 332 39 11 4197 4516 523394126 523393801 9.560000e-72 281.0
24 TraesCS5B01G150700 chr3D 96.403 139 5 0 451 589 528821167 528821305 3.510000e-56 230.0
25 TraesCS5B01G150700 chr3D 90.361 83 5 2 3856 3935 360046456 360046538 6.180000e-19 106.0
26 TraesCS5B01G150700 chr6B 89.164 323 31 3 4196 4515 48686056 48685735 2.530000e-107 399.0
27 TraesCS5B01G150700 chr6B 91.124 169 9 5 1791 1958 668978273 668978436 1.630000e-54 224.0
28 TraesCS5B01G150700 chr6D 87.421 318 38 2 4193 4510 422948383 422948698 9.230000e-97 364.0
29 TraesCS5B01G150700 chr2D 85.759 316 39 4 4205 4516 425248201 425248514 3.370000e-86 329.0
30 TraesCS5B01G150700 chr4D 84.545 330 45 5 4189 4515 182065788 182065462 5.640000e-84 322.0
31 TraesCS5B01G150700 chr3B 84.830 323 43 4 4198 4516 807547999 807547679 2.030000e-83 320.0
32 TraesCS5B01G150700 chr3B 84.810 316 38 9 4193 4502 113459900 113460211 4.390000e-80 309.0
33 TraesCS5B01G150700 chr7B 91.908 173 8 5 1791 1962 137025236 137025403 2.100000e-58 237.0
34 TraesCS5B01G150700 chr7B 90.909 77 4 1 3862 3935 304527180 304527256 2.870000e-17 100.0
35 TraesCS5B01G150700 chr1D 87.629 97 5 2 3862 3951 37527050 37526954 6.180000e-19 106.0
36 TraesCS5B01G150700 chr2B 90.909 77 4 1 3862 3935 9735851 9735927 2.870000e-17 100.0
37 TraesCS5B01G150700 chr4B 83.000 100 10 3 3862 3954 612262102 612262003 2.900000e-12 84.2
38 TraesCS5B01G150700 chr4B 86.486 74 7 2 3865 3935 296860298 296860371 1.350000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G150700 chr5B 278445452 278449967 4515 True 8340.000000 8340 100.000000 1 4516 1 chr5B.!!$R1 4515
1 TraesCS5B01G150700 chr5D 245186348 245190397 4049 True 2982.500000 5758 90.022500 1 4147 2 chr5D.!!$R3 4146
2 TraesCS5B01G150700 chr5A 329223001 329226986 3985 True 1882.666667 3134 92.217667 1 4147 3 chr5A.!!$R1 4146
3 TraesCS5B01G150700 chr2A 277332966 277334427 1461 False 642.666667 1173 89.622000 201 1956 3 chr2A.!!$F1 1755
4 TraesCS5B01G150700 chr7D 99931812 99932974 1162 False 853.000000 1170 92.639000 201 1958 2 chr7D.!!$F2 1757
5 TraesCS5B01G150700 chr3D 528820614 528822088 1474 False 567.333333 1157 94.565333 201 1958 3 chr3D.!!$F2 1757

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
665 992 0.037303 AATGGCTGGTGTGACTCTGG 59.963 55.0 0.0 0.0 0.00 3.86 F
697 1029 0.110295 TGGTGTGGTCTGGTGGATTG 59.890 55.0 0.0 0.0 0.00 2.67 F
2270 2696 0.316689 GAAACAGGTTCAACGCCACG 60.317 55.0 0.0 0.0 36.15 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 2920 0.457443 CAGTGTGCCTCGATCAGCTA 59.543 55.0 0.00 0.0 0.00 3.32 R
2564 2990 1.523758 GGTTGTCGCTGTTGGATTCT 58.476 50.0 0.00 0.0 0.00 2.40 R
4226 4677 0.098728 GAAACCACAATCGCCGGATG 59.901 55.0 5.05 0.0 31.83 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 5.308825 TCTGTCAGAAAAGAGGTGGAAATC 58.691 41.667 0.00 0.00 0.00 2.17
53 55 5.890985 TGTCAGAAAAGAGGTGGAAATCAAA 59.109 36.000 0.00 0.00 0.00 2.69
101 103 0.687920 TGGTGTTTGCCACTCGGATA 59.312 50.000 0.00 0.00 43.94 2.59
174 176 8.868522 AAGTTAATTCATTCAGGAAGATCACA 57.131 30.769 0.00 0.00 0.00 3.58
233 241 4.693283 AGACGTGTTGACTGATCAGAAAA 58.307 39.130 29.27 18.25 35.83 2.29
268 276 6.771749 AGTAGTAGACGGCACTAACAGATAAT 59.228 38.462 0.00 0.00 30.54 1.28
351 366 4.143263 CGTACCAGTTAAGGTTGTTTAGCG 60.143 45.833 0.00 0.00 43.08 4.26
443 461 1.077212 CACATTCAGGGGGCCTCTG 60.077 63.158 28.21 28.21 0.00 3.35
448 466 2.041265 CAGGGGGCCTCTGTACCT 59.959 66.667 25.90 8.21 0.00 3.08
592 919 0.794981 GTGACACACGCAAACGCAAA 60.795 50.000 0.00 0.00 45.53 3.68
642 969 0.827507 CTGGGCTAGCTCCTCCTCTC 60.828 65.000 13.26 0.00 0.00 3.20
663 990 1.059098 TGAATGGCTGGTGTGACTCT 58.941 50.000 0.00 0.00 0.00 3.24
664 991 1.271001 TGAATGGCTGGTGTGACTCTG 60.271 52.381 0.00 0.00 0.00 3.35
665 992 0.037303 AATGGCTGGTGTGACTCTGG 59.963 55.000 0.00 0.00 0.00 3.86
666 993 1.130054 ATGGCTGGTGTGACTCTGGT 61.130 55.000 0.00 0.00 0.00 4.00
667 994 0.471022 TGGCTGGTGTGACTCTGGTA 60.471 55.000 0.00 0.00 0.00 3.25
668 995 0.905357 GGCTGGTGTGACTCTGGTAT 59.095 55.000 0.00 0.00 0.00 2.73
669 996 1.406069 GGCTGGTGTGACTCTGGTATG 60.406 57.143 0.00 0.00 0.00 2.39
670 997 1.406069 GCTGGTGTGACTCTGGTATGG 60.406 57.143 0.00 0.00 0.00 2.74
671 998 1.902508 CTGGTGTGACTCTGGTATGGT 59.097 52.381 0.00 0.00 0.00 3.55
672 999 1.623311 TGGTGTGACTCTGGTATGGTG 59.377 52.381 0.00 0.00 0.00 4.17
697 1029 0.110295 TGGTGTGGTCTGGTGGATTG 59.890 55.000 0.00 0.00 0.00 2.67
704 1036 2.290896 TGGTCTGGTGGATTGGATTGAC 60.291 50.000 0.00 0.00 0.00 3.18
826 1162 0.805322 GAGTGAGCATGAGCCTGACG 60.805 60.000 0.00 0.00 43.56 4.35
876 1212 5.684550 GGGTAGACCAAACTTACAAACAG 57.315 43.478 0.21 0.00 39.85 3.16
880 1216 4.013728 AGACCAAACTTACAAACAGCACA 58.986 39.130 0.00 0.00 0.00 4.57
888 1224 0.581529 ACAAACAGCACACATCGTCG 59.418 50.000 0.00 0.00 0.00 5.12
900 1252 1.070821 CATCGTCGCTTCTCTTGCAA 58.929 50.000 0.00 0.00 0.00 4.08
940 1298 4.581824 CCAACCTGCTGCACATTCTTATAT 59.418 41.667 0.00 0.00 0.00 0.86
942 1300 3.567164 ACCTGCTGCACATTCTTATATGC 59.433 43.478 0.00 0.00 38.59 3.14
956 1314 6.268825 TCTTATATGCCCGAGTTAGCTTAG 57.731 41.667 0.00 0.00 0.00 2.18
958 1316 6.492429 TCTTATATGCCCGAGTTAGCTTAGAA 59.508 38.462 0.00 0.00 0.00 2.10
968 1326 5.423886 GAGTTAGCTTAGAAGAGGTTGCAT 58.576 41.667 0.00 0.00 0.00 3.96
983 1341 3.818787 CATTGCAGGCAGGCGGTC 61.819 66.667 0.00 0.00 36.28 4.79
984 1342 4.349503 ATTGCAGGCAGGCGGTCA 62.350 61.111 0.00 0.00 36.28 4.02
1323 1687 2.046892 CAGGAGGTGAAGGTGGCG 60.047 66.667 0.00 0.00 0.00 5.69
1419 1783 1.150536 GTGCAACTGGTCCTTGGGA 59.849 57.895 0.00 0.00 0.00 4.37
1438 1802 1.067749 CGGTGGGTGTACGACAACA 59.932 57.895 5.60 0.00 37.60 3.33
1592 1956 7.657336 AGGTATGTCTGGTTTTGTTACATTTG 58.343 34.615 0.00 0.00 33.15 2.32
1625 1989 9.155975 TGCATGTTTCTCTAGAAAGAATAGTTC 57.844 33.333 5.41 0.00 43.82 3.01
1666 2036 3.569701 AGCTCGGTTTTGTTCATTCATGT 59.430 39.130 0.00 0.00 0.00 3.21
1674 2044 6.534793 GGTTTTGTTCATTCATGTCAACAACT 59.465 34.615 11.27 0.00 38.22 3.16
1677 2048 8.854979 TTTGTTCATTCATGTCAACAACTAAG 57.145 30.769 11.27 0.00 38.22 2.18
1688 2059 4.676924 GTCAACAACTAAGAAATGCAGCAC 59.323 41.667 0.00 0.00 0.00 4.40
1743 2114 2.627515 ACATGCTCTGTCAGTGTTGT 57.372 45.000 0.00 3.72 29.94 3.32
1787 2158 4.981812 TGGGGAGTAAAAGGAAAGAGTTC 58.018 43.478 0.00 0.00 0.00 3.01
1789 2160 5.004448 GGGGAGTAAAAGGAAAGAGTTCTG 58.996 45.833 0.00 0.00 33.92 3.02
1799 2177 9.981460 AAAAGGAAAGAGTTCTGTGGAATATAT 57.019 29.630 0.00 0.00 33.92 0.86
1855 2253 6.543465 TGAAACCAAGGATGCATGATAAGTAG 59.457 38.462 2.46 0.00 0.00 2.57
1928 2350 0.889186 GAACCAGAGGGCAGCGAAAA 60.889 55.000 0.00 0.00 37.90 2.29
2044 2470 1.742761 CATCCAGTCATTCACGCCTT 58.257 50.000 0.00 0.00 0.00 4.35
2075 2501 6.580041 GTCAAAGTGTCAATAGCATTTGTGAG 59.420 38.462 0.00 0.00 0.00 3.51
2138 2564 7.082602 GCCAGAAAATAGTGATATGATTGCTG 58.917 38.462 0.00 0.00 0.00 4.41
2140 2566 8.288208 CCAGAAAATAGTGATATGATTGCTGTC 58.712 37.037 0.00 0.00 0.00 3.51
2161 2587 0.397941 CTCTGCTCCCCAAAGACACA 59.602 55.000 0.00 0.00 0.00 3.72
2162 2588 0.843309 TCTGCTCCCCAAAGACACAA 59.157 50.000 0.00 0.00 0.00 3.33
2163 2589 1.214175 TCTGCTCCCCAAAGACACAAA 59.786 47.619 0.00 0.00 0.00 2.83
2164 2590 1.610522 CTGCTCCCCAAAGACACAAAG 59.389 52.381 0.00 0.00 0.00 2.77
2165 2591 0.961753 GCTCCCCAAAGACACAAAGG 59.038 55.000 0.00 0.00 0.00 3.11
2166 2592 1.478654 GCTCCCCAAAGACACAAAGGA 60.479 52.381 0.00 0.00 0.00 3.36
2167 2593 2.944129 CTCCCCAAAGACACAAAGGAA 58.056 47.619 0.00 0.00 0.00 3.36
2168 2594 2.623416 CTCCCCAAAGACACAAAGGAAC 59.377 50.000 0.00 0.00 0.00 3.62
2169 2595 2.024846 TCCCCAAAGACACAAAGGAACA 60.025 45.455 0.00 0.00 0.00 3.18
2170 2596 2.100749 CCCCAAAGACACAAAGGAACAC 59.899 50.000 0.00 0.00 0.00 3.32
2178 2604 4.956075 AGACACAAAGGAACACAAAGGAAT 59.044 37.500 0.00 0.00 0.00 3.01
2270 2696 0.316689 GAAACAGGTTCAACGCCACG 60.317 55.000 0.00 0.00 36.15 4.94
2328 2754 1.683790 CGTCGGCGACTCAATCAACC 61.684 60.000 33.90 7.57 41.33 3.77
2494 2920 7.736893 AGAAGTAAGGTATGACACTTTCTGTT 58.263 34.615 0.00 0.00 31.57 3.16
2564 2990 0.750546 ACTGGTCGCCGCTGATACTA 60.751 55.000 0.00 0.00 0.00 1.82
2749 3175 8.395633 GGTCATGTAAGTACATCATTTTACACC 58.604 37.037 0.85 1.10 44.57 4.16
2751 3177 6.971527 TGTAAGTACATCATTTTACACCCG 57.028 37.500 0.00 0.00 32.71 5.28
2821 3247 8.299570 ACAAGTTGATAAAGTTTTGGATGCTAG 58.700 33.333 10.54 0.00 0.00 3.42
2885 3318 4.387598 AGCTAGCATGATGAACATCTTCC 58.612 43.478 18.83 0.88 38.60 3.46
2888 3321 2.512896 AGCATGATGAACATCTTCCCCT 59.487 45.455 14.50 3.88 38.60 4.79
2902 3335 1.754234 CCCCTTGTGCAGGTATGGC 60.754 63.158 0.00 0.00 42.02 4.40
2983 3416 4.330944 TGCTCTCAAGAAACTAACCGAA 57.669 40.909 0.00 0.00 0.00 4.30
3013 3446 1.593793 GCGAACGTCAACAACAAGACC 60.594 52.381 0.00 0.00 0.00 3.85
3072 3505 3.691498 GGTGAGACCAAAAACTGAAACG 58.309 45.455 0.00 0.00 38.42 3.60
3082 3515 6.086222 CCAAAAACTGAAACGTATCCATCAG 58.914 40.000 11.36 11.36 43.79 2.90
3100 3533 1.944024 CAGCCGTTAAACCTGACAACA 59.056 47.619 0.00 0.00 0.00 3.33
3107 3540 5.204833 CGTTAAACCTGACAACATGACAAG 58.795 41.667 0.00 0.00 0.00 3.16
3683 4121 5.488341 TGTAAAGAGCCAAGGAAGTGTATC 58.512 41.667 0.00 0.00 0.00 2.24
3686 4124 3.445008 AGAGCCAAGGAAGTGTATCTGA 58.555 45.455 0.00 0.00 0.00 3.27
3687 4125 3.450457 AGAGCCAAGGAAGTGTATCTGAG 59.550 47.826 0.00 0.00 0.00 3.35
3688 4126 3.445008 AGCCAAGGAAGTGTATCTGAGA 58.555 45.455 0.00 0.00 0.00 3.27
3689 4127 3.196685 AGCCAAGGAAGTGTATCTGAGAC 59.803 47.826 0.00 0.00 0.00 3.36
3700 4138 7.144234 AGTGTATCTGAGACAGTACTCCTAT 57.856 40.000 10.83 0.00 36.22 2.57
3795 4233 1.690352 ACACCGTGTTTGGCTACTAGT 59.310 47.619 0.00 0.00 0.00 2.57
3806 4244 5.664294 TTGGCTACTAGTGAAACGGAATA 57.336 39.130 5.39 0.00 45.86 1.75
3865 4309 1.047801 AAACCCATGTTTGGCACTCC 58.952 50.000 0.00 0.00 42.97 3.85
3866 4310 0.831711 AACCCATGTTTGGCACTCCC 60.832 55.000 0.00 0.00 42.15 4.30
3867 4311 1.077265 CCCATGTTTGGCACTCCCT 59.923 57.895 0.00 0.00 42.15 4.20
3868 4312 0.967380 CCCATGTTTGGCACTCCCTC 60.967 60.000 0.00 0.00 42.15 4.30
3869 4313 0.967380 CCATGTTTGGCACTCCCTCC 60.967 60.000 0.00 0.00 35.85 4.30
3870 4314 1.002134 ATGTTTGGCACTCCCTCCG 60.002 57.895 0.00 0.00 0.00 4.63
3871 4315 1.779061 ATGTTTGGCACTCCCTCCGT 61.779 55.000 0.00 0.00 0.00 4.69
3872 4316 1.671379 GTTTGGCACTCCCTCCGTC 60.671 63.158 0.00 0.00 0.00 4.79
3873 4317 1.841556 TTTGGCACTCCCTCCGTCT 60.842 57.895 0.00 0.00 0.00 4.18
3874 4318 1.415672 TTTGGCACTCCCTCCGTCTT 61.416 55.000 0.00 0.00 0.00 3.01
3875 4319 0.543410 TTGGCACTCCCTCCGTCTTA 60.543 55.000 0.00 0.00 0.00 2.10
3876 4320 0.543410 TGGCACTCCCTCCGTCTTAA 60.543 55.000 0.00 0.00 0.00 1.85
3877 4321 0.611714 GGCACTCCCTCCGTCTTAAA 59.388 55.000 0.00 0.00 0.00 1.52
3878 4322 1.002773 GGCACTCCCTCCGTCTTAAAA 59.997 52.381 0.00 0.00 0.00 1.52
3879 4323 2.355818 GGCACTCCCTCCGTCTTAAAAT 60.356 50.000 0.00 0.00 0.00 1.82
3880 4324 3.118519 GGCACTCCCTCCGTCTTAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
3881 4325 4.510571 GCACTCCCTCCGTCTTAAAATAA 58.489 43.478 0.00 0.00 0.00 1.40
3882 4326 4.571176 GCACTCCCTCCGTCTTAAAATAAG 59.429 45.833 0.00 0.00 0.00 1.73
3883 4327 5.731591 CACTCCCTCCGTCTTAAAATAAGT 58.268 41.667 0.00 0.00 0.00 2.24
3884 4328 5.581085 CACTCCCTCCGTCTTAAAATAAGTG 59.419 44.000 0.00 0.00 0.00 3.16
3885 4329 5.247792 ACTCCCTCCGTCTTAAAATAAGTGT 59.752 40.000 0.00 0.00 0.00 3.55
3886 4330 5.727434 TCCCTCCGTCTTAAAATAAGTGTC 58.273 41.667 0.00 0.00 0.00 3.67
3887 4331 5.482878 TCCCTCCGTCTTAAAATAAGTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
3888 4332 5.811100 CCCTCCGTCTTAAAATAAGTGTCTC 59.189 44.000 0.00 0.00 0.00 3.36
3889 4333 6.395629 CCTCCGTCTTAAAATAAGTGTCTCA 58.604 40.000 0.00 0.00 0.00 3.27
3890 4334 6.872020 CCTCCGTCTTAAAATAAGTGTCTCAA 59.128 38.462 0.00 0.00 0.00 3.02
3891 4335 7.148623 CCTCCGTCTTAAAATAAGTGTCTCAAC 60.149 40.741 0.00 0.00 0.00 3.18
3892 4336 6.647895 TCCGTCTTAAAATAAGTGTCTCAACC 59.352 38.462 0.00 0.00 0.00 3.77
3893 4337 6.649557 CCGTCTTAAAATAAGTGTCTCAACCT 59.350 38.462 0.00 0.00 0.00 3.50
3894 4338 7.172703 CCGTCTTAAAATAAGTGTCTCAACCTT 59.827 37.037 0.00 0.00 0.00 3.50
3895 4339 8.009974 CGTCTTAAAATAAGTGTCTCAACCTTG 58.990 37.037 0.00 0.00 0.00 3.61
3896 4340 8.837389 GTCTTAAAATAAGTGTCTCAACCTTGT 58.163 33.333 0.00 0.00 0.00 3.16
3899 4343 9.841295 TTAAAATAAGTGTCTCAACCTTGTACT 57.159 29.630 0.00 0.00 0.00 2.73
3901 4345 9.841295 AAAATAAGTGTCTCAACCTTGTACTAA 57.159 29.630 0.00 0.00 0.00 2.24
3902 4346 8.828688 AATAAGTGTCTCAACCTTGTACTAAC 57.171 34.615 0.00 0.00 0.00 2.34
3903 4347 6.481434 AAGTGTCTCAACCTTGTACTAACT 57.519 37.500 0.00 0.00 0.00 2.24
3904 4348 6.481434 AGTGTCTCAACCTTGTACTAACTT 57.519 37.500 0.00 0.00 0.00 2.66
3905 4349 6.885922 AGTGTCTCAACCTTGTACTAACTTT 58.114 36.000 0.00 0.00 0.00 2.66
3906 4350 8.015185 AGTGTCTCAACCTTGTACTAACTTTA 57.985 34.615 0.00 0.00 0.00 1.85
3907 4351 7.924947 AGTGTCTCAACCTTGTACTAACTTTAC 59.075 37.037 0.00 0.00 0.00 2.01
3908 4352 7.707893 GTGTCTCAACCTTGTACTAACTTTACA 59.292 37.037 0.00 0.00 0.00 2.41
3909 4353 8.259411 TGTCTCAACCTTGTACTAACTTTACAA 58.741 33.333 0.00 0.00 37.15 2.41
3910 4354 9.101655 GTCTCAACCTTGTACTAACTTTACAAA 57.898 33.333 0.00 0.00 38.62 2.83
3911 4355 9.321562 TCTCAACCTTGTACTAACTTTACAAAG 57.678 33.333 0.13 0.13 38.62 2.77
3930 4374 9.616156 TTACAAAGTTGTATTAAGGTTGAGACA 57.384 29.630 4.79 0.00 42.66 3.41
3931 4375 7.927048 ACAAAGTTGTATTAAGGTTGAGACAC 58.073 34.615 0.00 0.00 40.16 3.67
3932 4376 7.773690 ACAAAGTTGTATTAAGGTTGAGACACT 59.226 33.333 0.00 0.00 40.16 3.55
3933 4377 8.621286 CAAAGTTGTATTAAGGTTGAGACACTT 58.379 33.333 0.00 0.00 0.00 3.16
3934 4378 9.841295 AAAGTTGTATTAAGGTTGAGACACTTA 57.159 29.630 0.00 0.00 0.00 2.24
3935 4379 9.841295 AAGTTGTATTAAGGTTGAGACACTTAA 57.159 29.630 0.00 0.00 39.95 1.85
3936 4380 9.841295 AGTTGTATTAAGGTTGAGACACTTAAA 57.159 29.630 0.00 0.00 39.34 1.52
3939 4383 9.485206 TGTATTAAGGTTGAGACACTTAAAGAC 57.515 33.333 0.00 0.00 39.34 3.01
3940 4384 7.653767 ATTAAGGTTGAGACACTTAAAGACG 57.346 36.000 0.00 0.00 39.34 4.18
3941 4385 3.991367 AGGTTGAGACACTTAAAGACGG 58.009 45.455 0.00 0.00 0.00 4.79
3942 4386 3.640029 AGGTTGAGACACTTAAAGACGGA 59.360 43.478 0.00 0.00 0.00 4.69
3943 4387 3.988517 GGTTGAGACACTTAAAGACGGAG 59.011 47.826 0.00 0.00 0.00 4.63
3944 4388 3.936372 TGAGACACTTAAAGACGGAGG 57.064 47.619 0.00 0.00 0.00 4.30
3945 4389 2.561419 TGAGACACTTAAAGACGGAGGG 59.439 50.000 0.00 0.00 0.00 4.30
3946 4390 2.824341 GAGACACTTAAAGACGGAGGGA 59.176 50.000 0.00 0.00 0.00 4.20
3949 4393 3.760684 GACACTTAAAGACGGAGGGAGTA 59.239 47.826 0.00 0.00 0.00 2.59
4034 4479 7.361286 GGGATTAGTGAGTGAAAAGCTTTACTG 60.361 40.741 17.34 0.00 31.86 2.74
4082 4533 0.463620 TTTTTGGGTGTGGCAAGAGC 59.536 50.000 0.00 0.00 41.10 4.09
4133 4584 2.026729 TCCAGCAATGTTATGTCCGGAA 60.027 45.455 5.23 0.00 0.00 4.30
4147 4598 4.340617 TGTCCGGAAATAAAGCCAATCTT 58.659 39.130 5.23 0.00 36.34 2.40
4148 4599 4.770010 TGTCCGGAAATAAAGCCAATCTTT 59.230 37.500 5.23 0.00 46.17 2.52
4149 4600 5.245075 TGTCCGGAAATAAAGCCAATCTTTT 59.755 36.000 5.23 0.00 42.06 2.27
4150 4601 6.163476 GTCCGGAAATAAAGCCAATCTTTTT 58.837 36.000 5.23 0.00 42.06 1.94
4173 4624 5.705609 TTCTTTGAGGGTTGAAATACAGC 57.294 39.130 0.00 0.00 0.00 4.40
4174 4625 4.985538 TCTTTGAGGGTTGAAATACAGCT 58.014 39.130 0.00 0.00 0.00 4.24
4175 4626 6.121776 TCTTTGAGGGTTGAAATACAGCTA 57.878 37.500 0.00 0.00 0.00 3.32
4176 4627 6.539173 TCTTTGAGGGTTGAAATACAGCTAA 58.461 36.000 0.00 0.00 0.00 3.09
4177 4628 7.175104 TCTTTGAGGGTTGAAATACAGCTAAT 58.825 34.615 0.00 0.00 0.00 1.73
4178 4629 7.336931 TCTTTGAGGGTTGAAATACAGCTAATC 59.663 37.037 0.00 0.00 0.00 1.75
4179 4630 6.313519 TGAGGGTTGAAATACAGCTAATCT 57.686 37.500 0.00 0.00 0.00 2.40
4181 4632 6.070251 TGAGGGTTGAAATACAGCTAATCTGA 60.070 38.462 0.00 0.00 45.72 3.27
4182 4633 6.904626 AGGGTTGAAATACAGCTAATCTGAT 58.095 36.000 0.00 0.00 45.72 2.90
4183 4634 7.349598 AGGGTTGAAATACAGCTAATCTGATT 58.650 34.615 8.14 8.14 45.72 2.57
4184 4635 8.494433 AGGGTTGAAATACAGCTAATCTGATTA 58.506 33.333 9.58 9.58 45.72 1.75
4185 4636 8.560374 GGGTTGAAATACAGCTAATCTGATTAC 58.440 37.037 6.01 4.45 45.72 1.89
4186 4637 8.560374 GGTTGAAATACAGCTAATCTGATTACC 58.440 37.037 6.01 0.68 45.72 2.85
4187 4638 8.560374 GTTGAAATACAGCTAATCTGATTACCC 58.440 37.037 6.01 1.51 45.72 3.69
4188 4639 8.034313 TGAAATACAGCTAATCTGATTACCCT 57.966 34.615 6.01 3.60 45.72 4.34
4189 4640 7.933577 TGAAATACAGCTAATCTGATTACCCTG 59.066 37.037 20.69 20.69 45.72 4.45
4190 4641 4.696479 ACAGCTAATCTGATTACCCTGG 57.304 45.455 23.43 11.21 45.72 4.45
4191 4642 4.298626 ACAGCTAATCTGATTACCCTGGA 58.701 43.478 23.43 3.63 45.72 3.86
4192 4643 4.101741 ACAGCTAATCTGATTACCCTGGAC 59.898 45.833 23.43 8.08 45.72 4.02
4193 4644 4.346418 CAGCTAATCTGATTACCCTGGACT 59.654 45.833 17.44 5.68 45.72 3.85
4194 4645 5.540337 CAGCTAATCTGATTACCCTGGACTA 59.460 44.000 17.44 0.00 45.72 2.59
4195 4646 6.042093 CAGCTAATCTGATTACCCTGGACTAA 59.958 42.308 17.44 0.00 45.72 2.24
4196 4647 6.268847 AGCTAATCTGATTACCCTGGACTAAG 59.731 42.308 6.01 0.00 0.00 2.18
4197 4648 6.267928 GCTAATCTGATTACCCTGGACTAAGA 59.732 42.308 6.01 0.00 0.00 2.10
4198 4649 6.739331 AATCTGATTACCCTGGACTAAGAG 57.261 41.667 0.00 0.00 0.00 2.85
4199 4650 3.961408 TCTGATTACCCTGGACTAAGAGC 59.039 47.826 0.00 0.00 0.00 4.09
4200 4651 3.706594 CTGATTACCCTGGACTAAGAGCA 59.293 47.826 0.00 0.00 0.00 4.26
4201 4652 4.298626 TGATTACCCTGGACTAAGAGCAT 58.701 43.478 0.00 0.00 0.00 3.79
4202 4653 4.345257 TGATTACCCTGGACTAAGAGCATC 59.655 45.833 0.00 0.00 0.00 3.91
4214 4665 2.950877 GAGCATCTCCACTCGTTCG 58.049 57.895 0.00 0.00 0.00 3.95
4215 4666 0.526524 GAGCATCTCCACTCGTTCGG 60.527 60.000 0.00 0.00 0.00 4.30
4216 4667 2.167861 GCATCTCCACTCGTTCGGC 61.168 63.158 0.00 0.00 0.00 5.54
4217 4668 1.519455 CATCTCCACTCGTTCGGCC 60.519 63.158 0.00 0.00 0.00 6.13
4218 4669 1.982395 ATCTCCACTCGTTCGGCCA 60.982 57.895 2.24 0.00 0.00 5.36
4219 4670 2.227089 ATCTCCACTCGTTCGGCCAC 62.227 60.000 2.24 0.00 0.00 5.01
4220 4671 3.934391 CTCCACTCGTTCGGCCACC 62.934 68.421 2.24 0.00 0.00 4.61
4222 4673 4.308458 CACTCGTTCGGCCACCCA 62.308 66.667 2.24 0.00 0.00 4.51
4223 4674 4.003788 ACTCGTTCGGCCACCCAG 62.004 66.667 2.24 0.00 0.00 4.45
4242 4693 2.824041 GCATCCGGCGATTGTGGT 60.824 61.111 9.30 0.00 0.00 4.16
4243 4694 2.406616 GCATCCGGCGATTGTGGTT 61.407 57.895 9.30 0.00 0.00 3.67
4244 4695 1.933115 GCATCCGGCGATTGTGGTTT 61.933 55.000 9.30 0.00 0.00 3.27
4245 4696 0.098728 CATCCGGCGATTGTGGTTTC 59.901 55.000 9.30 0.00 0.00 2.78
4246 4697 1.366111 ATCCGGCGATTGTGGTTTCG 61.366 55.000 9.30 0.00 38.37 3.46
4251 4702 3.835686 CGATTGTGGTTTCGCACAA 57.164 47.368 8.45 8.45 44.10 3.33
4252 4703 1.673760 CGATTGTGGTTTCGCACAAG 58.326 50.000 11.15 0.00 43.37 3.16
4253 4704 1.408422 GATTGTGGTTTCGCACAAGC 58.592 50.000 11.15 8.76 43.37 4.01
4289 4740 2.190578 CTGGGGGCGATCCAGTTC 59.809 66.667 10.70 0.00 44.97 3.01
4290 4741 3.406595 CTGGGGGCGATCCAGTTCC 62.407 68.421 10.70 0.00 44.97 3.62
4291 4742 4.191015 GGGGGCGATCCAGTTCCC 62.191 72.222 0.00 0.00 37.22 3.97
4292 4743 3.407967 GGGGCGATCCAGTTCCCA 61.408 66.667 0.00 0.00 40.53 4.37
4293 4744 2.190578 GGGCGATCCAGTTCCCAG 59.809 66.667 0.00 0.00 38.62 4.45
4294 4745 2.514824 GGCGATCCAGTTCCCAGC 60.515 66.667 0.00 0.00 0.00 4.85
4295 4746 2.514824 GCGATCCAGTTCCCAGCC 60.515 66.667 0.00 0.00 0.00 4.85
4296 4747 3.036429 GCGATCCAGTTCCCAGCCT 62.036 63.158 0.00 0.00 0.00 4.58
4297 4748 1.144936 CGATCCAGTTCCCAGCCTC 59.855 63.158 0.00 0.00 0.00 4.70
4298 4749 1.144936 GATCCAGTTCCCAGCCTCG 59.855 63.158 0.00 0.00 0.00 4.63
4299 4750 1.613630 ATCCAGTTCCCAGCCTCGT 60.614 57.895 0.00 0.00 0.00 4.18
4300 4751 1.617947 ATCCAGTTCCCAGCCTCGTC 61.618 60.000 0.00 0.00 0.00 4.20
4301 4752 2.266055 CAGTTCCCAGCCTCGTCC 59.734 66.667 0.00 0.00 0.00 4.79
4302 4753 2.120718 AGTTCCCAGCCTCGTCCT 59.879 61.111 0.00 0.00 0.00 3.85
4303 4754 1.985116 AGTTCCCAGCCTCGTCCTC 60.985 63.158 0.00 0.00 0.00 3.71
4304 4755 2.119611 TTCCCAGCCTCGTCCTCA 59.880 61.111 0.00 0.00 0.00 3.86
4305 4756 1.984570 TTCCCAGCCTCGTCCTCAG 60.985 63.158 0.00 0.00 0.00 3.35
4306 4757 2.363018 CCCAGCCTCGTCCTCAGA 60.363 66.667 0.00 0.00 0.00 3.27
4307 4758 1.760086 CCCAGCCTCGTCCTCAGAT 60.760 63.158 0.00 0.00 0.00 2.90
4308 4759 1.333636 CCCAGCCTCGTCCTCAGATT 61.334 60.000 0.00 0.00 0.00 2.40
4309 4760 0.539051 CCAGCCTCGTCCTCAGATTT 59.461 55.000 0.00 0.00 0.00 2.17
4310 4761 1.472376 CCAGCCTCGTCCTCAGATTTC 60.472 57.143 0.00 0.00 0.00 2.17
4311 4762 0.457851 AGCCTCGTCCTCAGATTTCG 59.542 55.000 0.00 0.00 0.00 3.46
4312 4763 0.528684 GCCTCGTCCTCAGATTTCGG 60.529 60.000 0.00 0.00 0.00 4.30
4313 4764 0.528684 CCTCGTCCTCAGATTTCGGC 60.529 60.000 0.00 0.00 0.00 5.54
4314 4765 0.528684 CTCGTCCTCAGATTTCGGCC 60.529 60.000 0.00 0.00 0.00 6.13
4315 4766 1.521681 CGTCCTCAGATTTCGGCCC 60.522 63.158 0.00 0.00 0.00 5.80
4316 4767 1.153147 GTCCTCAGATTTCGGCCCC 60.153 63.158 0.00 0.00 0.00 5.80
4317 4768 1.615124 TCCTCAGATTTCGGCCCCA 60.615 57.895 0.00 0.00 0.00 4.96
4318 4769 1.204786 TCCTCAGATTTCGGCCCCAA 61.205 55.000 0.00 0.00 0.00 4.12
4319 4770 0.749454 CCTCAGATTTCGGCCCCAAG 60.749 60.000 0.00 0.00 0.00 3.61
4320 4771 0.253044 CTCAGATTTCGGCCCCAAGA 59.747 55.000 0.00 0.00 0.00 3.02
4321 4772 0.035439 TCAGATTTCGGCCCCAAGAC 60.035 55.000 0.00 0.00 0.00 3.01
4322 4773 1.078426 AGATTTCGGCCCCAAGACG 60.078 57.895 0.00 0.00 0.00 4.18
4323 4774 2.750237 ATTTCGGCCCCAAGACGC 60.750 61.111 0.00 0.00 0.00 5.19
4328 4779 4.849310 GGCCCCAAGACGCGCATA 62.849 66.667 5.73 0.00 0.00 3.14
4329 4780 2.822255 GCCCCAAGACGCGCATAA 60.822 61.111 5.73 0.00 0.00 1.90
4330 4781 2.823829 GCCCCAAGACGCGCATAAG 61.824 63.158 5.73 0.00 0.00 1.73
4331 4782 1.449601 CCCCAAGACGCGCATAAGT 60.450 57.895 5.73 0.00 0.00 2.24
4332 4783 1.024579 CCCCAAGACGCGCATAAGTT 61.025 55.000 5.73 0.00 0.00 2.66
4333 4784 0.373716 CCCAAGACGCGCATAAGTTC 59.626 55.000 5.73 0.00 0.00 3.01
4334 4785 1.075542 CCAAGACGCGCATAAGTTCA 58.924 50.000 5.73 0.00 0.00 3.18
4335 4786 1.463056 CCAAGACGCGCATAAGTTCAA 59.537 47.619 5.73 0.00 0.00 2.69
4336 4787 2.095969 CCAAGACGCGCATAAGTTCAAA 60.096 45.455 5.73 0.00 0.00 2.69
4337 4788 3.426159 CCAAGACGCGCATAAGTTCAAAT 60.426 43.478 5.73 0.00 0.00 2.32
4338 4789 4.158384 CAAGACGCGCATAAGTTCAAATT 58.842 39.130 5.73 0.00 0.00 1.82
4339 4790 4.419522 AGACGCGCATAAGTTCAAATTT 57.580 36.364 5.73 0.00 0.00 1.82
4340 4791 4.158384 AGACGCGCATAAGTTCAAATTTG 58.842 39.130 12.15 12.15 0.00 2.32
4341 4792 2.661195 ACGCGCATAAGTTCAAATTTGC 59.339 40.909 13.54 0.46 0.00 3.68
4342 4793 2.027926 CGCGCATAAGTTCAAATTTGCC 59.972 45.455 13.54 6.45 0.00 4.52
4343 4794 2.992543 GCGCATAAGTTCAAATTTGCCA 59.007 40.909 13.54 0.00 0.00 4.92
4344 4795 3.618150 GCGCATAAGTTCAAATTTGCCAT 59.382 39.130 13.54 2.47 0.00 4.40
4345 4796 4.093261 GCGCATAAGTTCAAATTTGCCATT 59.907 37.500 13.54 9.47 0.00 3.16
4346 4797 5.390779 GCGCATAAGTTCAAATTTGCCATTT 60.391 36.000 13.54 7.96 0.00 2.32
4347 4798 6.242829 CGCATAAGTTCAAATTTGCCATTTC 58.757 36.000 13.54 0.72 0.00 2.17
4348 4799 6.091169 CGCATAAGTTCAAATTTGCCATTTCT 59.909 34.615 13.54 2.82 0.00 2.52
4349 4800 7.458677 GCATAAGTTCAAATTTGCCATTTCTC 58.541 34.615 13.54 0.00 0.00 2.87
4350 4801 7.669098 CATAAGTTCAAATTTGCCATTTCTCG 58.331 34.615 13.54 0.00 0.00 4.04
4351 4802 3.989817 AGTTCAAATTTGCCATTTCTCGC 59.010 39.130 13.54 0.00 0.00 5.03
4352 4803 3.940209 TCAAATTTGCCATTTCTCGCT 57.060 38.095 13.54 0.00 0.00 4.93
4353 4804 5.048083 AGTTCAAATTTGCCATTTCTCGCTA 60.048 36.000 13.54 0.00 0.00 4.26
4354 4805 4.732784 TCAAATTTGCCATTTCTCGCTAC 58.267 39.130 13.54 0.00 0.00 3.58
4355 4806 4.217334 TCAAATTTGCCATTTCTCGCTACA 59.783 37.500 13.54 0.00 0.00 2.74
4356 4807 4.782019 AATTTGCCATTTCTCGCTACAA 57.218 36.364 0.00 0.00 0.00 2.41
4357 4808 4.782019 ATTTGCCATTTCTCGCTACAAA 57.218 36.364 0.00 0.00 0.00 2.83
4358 4809 4.576216 TTTGCCATTTCTCGCTACAAAA 57.424 36.364 0.00 0.00 0.00 2.44
4359 4810 4.576216 TTGCCATTTCTCGCTACAAAAA 57.424 36.364 0.00 0.00 0.00 1.94
4381 4832 2.785258 GCCACAAGTTCGGCGATC 59.215 61.111 11.76 10.67 38.82 3.69
4382 4833 2.032634 GCCACAAGTTCGGCGATCA 61.033 57.895 19.04 0.00 38.82 2.92
4383 4834 1.573829 GCCACAAGTTCGGCGATCAA 61.574 55.000 19.04 0.00 38.82 2.57
4384 4835 0.165944 CCACAAGTTCGGCGATCAAC 59.834 55.000 19.04 11.12 0.00 3.18
4385 4836 0.179250 CACAAGTTCGGCGATCAACG 60.179 55.000 19.04 9.57 45.66 4.10
4386 4837 1.289109 ACAAGTTCGGCGATCAACGG 61.289 55.000 19.04 10.95 42.83 4.44
4393 4844 4.166011 GCGATCAACGGCTGCCAC 62.166 66.667 20.29 1.59 42.83 5.01
4394 4845 2.741985 CGATCAACGGCTGCCACA 60.742 61.111 20.29 0.00 38.46 4.17
4395 4846 2.324330 CGATCAACGGCTGCCACAA 61.324 57.895 20.29 0.69 38.46 3.33
4396 4847 1.851021 CGATCAACGGCTGCCACAAA 61.851 55.000 20.29 1.09 38.46 2.83
4397 4848 0.313672 GATCAACGGCTGCCACAAAA 59.686 50.000 20.29 0.00 0.00 2.44
4398 4849 0.314935 ATCAACGGCTGCCACAAAAG 59.685 50.000 20.29 3.29 0.00 2.27
4399 4850 1.034838 TCAACGGCTGCCACAAAAGT 61.035 50.000 20.29 4.00 0.00 2.66
4400 4851 0.179113 CAACGGCTGCCACAAAAGTT 60.179 50.000 20.29 10.38 0.00 2.66
4401 4852 0.534873 AACGGCTGCCACAAAAGTTT 59.465 45.000 20.29 0.00 0.00 2.66
4402 4853 0.179113 ACGGCTGCCACAAAAGTTTG 60.179 50.000 20.29 2.22 43.62 2.93
4403 4854 0.875474 CGGCTGCCACAAAAGTTTGG 60.875 55.000 20.29 0.00 42.34 3.28
4409 4860 2.791383 CCACAAAAGTTTGGCGATCA 57.209 45.000 8.55 0.00 42.34 2.92
4410 4861 2.393764 CCACAAAAGTTTGGCGATCAC 58.606 47.619 8.55 0.00 42.34 3.06
4411 4862 2.393764 CACAAAAGTTTGGCGATCACC 58.606 47.619 8.55 0.00 42.34 4.02
4412 4863 2.028130 ACAAAAGTTTGGCGATCACCA 58.972 42.857 0.00 0.00 42.34 4.17
4413 4864 2.627699 ACAAAAGTTTGGCGATCACCAT 59.372 40.909 2.64 0.00 42.34 3.55
4414 4865 3.069443 ACAAAAGTTTGGCGATCACCATT 59.931 39.130 2.64 0.00 42.34 3.16
4415 4866 4.279671 ACAAAAGTTTGGCGATCACCATTA 59.720 37.500 2.64 0.00 42.34 1.90
4416 4867 5.047377 ACAAAAGTTTGGCGATCACCATTAT 60.047 36.000 2.64 0.00 42.34 1.28
4417 4868 6.151985 ACAAAAGTTTGGCGATCACCATTATA 59.848 34.615 2.64 0.00 42.34 0.98
4418 4869 6.377327 AAAGTTTGGCGATCACCATTATAG 57.623 37.500 2.64 0.00 40.13 1.31
4419 4870 5.036117 AGTTTGGCGATCACCATTATAGT 57.964 39.130 2.64 0.00 40.13 2.12
4420 4871 5.437060 AGTTTGGCGATCACCATTATAGTT 58.563 37.500 2.64 0.00 40.13 2.24
4421 4872 5.527582 AGTTTGGCGATCACCATTATAGTTC 59.472 40.000 2.64 0.00 40.13 3.01
4422 4873 3.649073 TGGCGATCACCATTATAGTTCG 58.351 45.455 0.00 0.00 33.75 3.95
4423 4874 2.993899 GGCGATCACCATTATAGTTCGG 59.006 50.000 0.00 0.00 0.00 4.30
4424 4875 2.412089 GCGATCACCATTATAGTTCGGC 59.588 50.000 0.00 0.00 0.00 5.54
4425 4876 2.661675 CGATCACCATTATAGTTCGGCG 59.338 50.000 0.00 0.00 0.00 6.46
4426 4877 3.610821 CGATCACCATTATAGTTCGGCGA 60.611 47.826 4.99 4.99 0.00 5.54
4427 4878 4.495422 GATCACCATTATAGTTCGGCGAT 58.505 43.478 11.76 0.00 0.00 4.58
4428 4879 3.909430 TCACCATTATAGTTCGGCGATC 58.091 45.455 11.76 10.67 0.00 3.69
4429 4880 3.319689 TCACCATTATAGTTCGGCGATCA 59.680 43.478 19.04 4.52 0.00 2.92
4430 4881 4.055360 CACCATTATAGTTCGGCGATCAA 58.945 43.478 19.04 6.26 0.00 2.57
4431 4882 4.509970 CACCATTATAGTTCGGCGATCAAA 59.490 41.667 19.04 10.75 0.00 2.69
4432 4883 4.510340 ACCATTATAGTTCGGCGATCAAAC 59.490 41.667 19.04 10.75 0.00 2.93
4433 4884 4.509970 CCATTATAGTTCGGCGATCAAACA 59.490 41.667 19.04 0.00 0.00 2.83
4434 4885 5.179368 CCATTATAGTTCGGCGATCAAACAT 59.821 40.000 19.04 9.30 0.00 2.71
4435 4886 6.367695 CCATTATAGTTCGGCGATCAAACATA 59.632 38.462 19.04 8.49 0.00 2.29
4436 4887 6.758593 TTATAGTTCGGCGATCAAACATAC 57.241 37.500 19.04 8.23 0.00 2.39
4437 4888 3.247006 AGTTCGGCGATCAAACATACT 57.753 42.857 19.04 10.39 0.00 2.12
4438 4889 3.187700 AGTTCGGCGATCAAACATACTC 58.812 45.455 19.04 0.00 0.00 2.59
4439 4890 1.835121 TCGGCGATCAAACATACTCG 58.165 50.000 4.99 0.00 0.00 4.18
4440 4891 1.402613 TCGGCGATCAAACATACTCGA 59.597 47.619 4.99 0.00 33.07 4.04
4441 4892 2.159352 TCGGCGATCAAACATACTCGAA 60.159 45.455 4.99 0.00 33.07 3.71
4442 4893 2.601314 CGGCGATCAAACATACTCGAAA 59.399 45.455 0.00 0.00 33.07 3.46
4443 4894 3.301835 CGGCGATCAAACATACTCGAAAG 60.302 47.826 0.00 0.00 33.07 2.62
4444 4895 3.617263 GGCGATCAAACATACTCGAAAGT 59.383 43.478 0.00 0.00 39.66 2.66
4445 4896 4.092968 GGCGATCAAACATACTCGAAAGTT 59.907 41.667 0.00 0.00 36.92 2.66
4446 4897 5.248834 GCGATCAAACATACTCGAAAGTTC 58.751 41.667 0.00 0.00 36.92 3.01
4456 4907 3.810148 CGAAAGTTCGGCGTTCAAA 57.190 47.368 6.85 0.00 46.30 2.69
4457 4908 2.093972 CGAAAGTTCGGCGTTCAAAA 57.906 45.000 6.85 0.00 46.30 2.44
4458 4909 2.034076 CGAAAGTTCGGCGTTCAAAAG 58.966 47.619 6.85 0.00 46.30 2.27
4459 4910 2.381589 GAAAGTTCGGCGTTCAAAAGG 58.618 47.619 6.85 0.00 35.97 3.11
4460 4911 1.670791 AAGTTCGGCGTTCAAAAGGA 58.329 45.000 6.85 0.00 0.00 3.36
4461 4912 1.670791 AGTTCGGCGTTCAAAAGGAA 58.329 45.000 6.85 0.00 0.00 3.36
4462 4913 1.602377 AGTTCGGCGTTCAAAAGGAAG 59.398 47.619 6.85 0.00 35.82 3.46
4463 4914 0.948678 TTCGGCGTTCAAAAGGAAGG 59.051 50.000 6.85 0.00 42.78 3.46
4464 4915 0.107081 TCGGCGTTCAAAAGGAAGGA 59.893 50.000 6.85 0.00 42.57 3.36
4465 4916 0.237498 CGGCGTTCAAAAGGAAGGAC 59.763 55.000 0.00 0.00 44.24 3.85
4466 4917 0.237498 GGCGTTCAAAAGGAAGGACG 59.763 55.000 0.00 0.00 42.57 4.79
4467 4918 0.385598 GCGTTCAAAAGGAAGGACGC 60.386 55.000 2.28 2.28 42.57 5.19
4468 4919 0.110823 CGTTCAAAAGGAAGGACGCG 60.111 55.000 3.53 3.53 42.57 6.01
4469 4920 0.385598 GTTCAAAAGGAAGGACGCGC 60.386 55.000 5.73 0.00 35.82 6.86
4470 4921 0.816018 TTCAAAAGGAAGGACGCGCA 60.816 50.000 5.73 0.00 0.00 6.09
4471 4922 1.207593 CAAAAGGAAGGACGCGCAG 59.792 57.895 5.73 2.42 0.00 5.18
4472 4923 1.966451 AAAAGGAAGGACGCGCAGG 60.966 57.895 5.73 0.00 0.00 4.85
4473 4924 2.391724 AAAAGGAAGGACGCGCAGGA 62.392 55.000 5.73 0.00 0.00 3.86
4474 4925 2.391724 AAAGGAAGGACGCGCAGGAA 62.392 55.000 5.73 0.00 0.00 3.36
4475 4926 2.358247 GGAAGGACGCGCAGGAAA 60.358 61.111 5.73 0.00 0.00 3.13
4476 4927 2.677979 GGAAGGACGCGCAGGAAAC 61.678 63.158 5.73 0.00 0.00 2.78
4477 4928 3.011760 GAAGGACGCGCAGGAAACG 62.012 63.158 5.73 0.00 0.00 3.60
4485 4936 2.712077 CGCAGGAAACGCATCAAAC 58.288 52.632 0.00 0.00 0.00 2.93
4486 4937 1.059657 CGCAGGAAACGCATCAAACG 61.060 55.000 0.00 0.00 0.00 3.60
4487 4938 0.237235 GCAGGAAACGCATCAAACGA 59.763 50.000 0.00 0.00 0.00 3.85
4488 4939 1.950472 CAGGAAACGCATCAAACGAC 58.050 50.000 0.00 0.00 0.00 4.34
4489 4940 0.511221 AGGAAACGCATCAAACGACG 59.489 50.000 0.00 0.00 0.00 5.12
4490 4941 0.452122 GGAAACGCATCAAACGACGG 60.452 55.000 0.00 0.00 0.00 4.79
4491 4942 1.058057 GAAACGCATCAAACGACGGC 61.058 55.000 0.00 0.00 0.00 5.68
4492 4943 1.777030 AAACGCATCAAACGACGGCA 61.777 50.000 0.00 0.00 0.00 5.69
4493 4944 2.096406 CGCATCAAACGACGGCAG 59.904 61.111 0.00 0.00 0.00 4.85
4494 4945 2.480555 GCATCAAACGACGGCAGG 59.519 61.111 0.00 0.00 0.00 4.85
4495 4946 2.480555 CATCAAACGACGGCAGGC 59.519 61.111 0.00 0.00 0.00 4.85
4496 4947 2.034879 CATCAAACGACGGCAGGCT 61.035 57.895 0.00 0.00 0.00 4.58
4497 4948 1.741770 ATCAAACGACGGCAGGCTC 60.742 57.895 0.00 0.00 0.00 4.70
4498 4949 3.423154 CAAACGACGGCAGGCTCC 61.423 66.667 0.00 0.00 0.00 4.70
4499 4950 3.626924 AAACGACGGCAGGCTCCT 61.627 61.111 0.00 0.00 0.00 3.69
4500 4951 3.591254 AAACGACGGCAGGCTCCTC 62.591 63.158 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.466827 TGACAGAAGTAGCCGGACATATA 58.533 43.478 5.05 0.00 0.00 0.86
101 103 2.096248 ACGGTGGTGTGTTGTCAATTT 58.904 42.857 0.00 0.00 0.00 1.82
166 168 3.610114 GCATGCGTCAAAGTTGTGATCTT 60.610 43.478 0.00 0.00 0.00 2.40
174 176 3.111536 GCATGCATGCGTCAAAGTT 57.888 47.368 33.99 0.00 44.67 2.66
194 196 3.338839 CGTCTTAACGTGTGTTTGTGTG 58.661 45.455 0.00 0.00 43.94 3.82
195 197 3.644805 CGTCTTAACGTGTGTTTGTGT 57.355 42.857 0.00 0.00 43.94 3.72
316 324 2.279582 CTGGTACGGTCACATCACTC 57.720 55.000 0.00 0.00 0.00 3.51
443 461 1.318576 AGTGCAAAAGCCACAGGTAC 58.681 50.000 0.00 0.00 35.69 3.34
448 466 1.691196 AAGCTAGTGCAAAAGCCACA 58.309 45.000 15.89 0.00 42.74 4.17
461 788 9.331282 ACCTAATTAGCATTCAAAGTAAGCTAG 57.669 33.333 6.99 0.00 38.81 3.42
469 796 7.121168 TGTTCCTCACCTAATTAGCATTCAAAG 59.879 37.037 6.99 0.00 0.00 2.77
471 798 6.480763 TGTTCCTCACCTAATTAGCATTCAA 58.519 36.000 6.99 0.00 0.00 2.69
626 953 1.039856 CAAGAGAGGAGGAGCTAGCC 58.960 60.000 12.13 2.59 0.00 3.93
642 969 1.808945 GAGTCACACCAGCCATTCAAG 59.191 52.381 0.00 0.00 0.00 3.02
663 990 0.109532 CACCACACCACACCATACCA 59.890 55.000 0.00 0.00 0.00 3.25
664 991 0.109723 ACACCACACCACACCATACC 59.890 55.000 0.00 0.00 0.00 2.73
665 992 1.234821 CACACCACACCACACCATAC 58.765 55.000 0.00 0.00 0.00 2.39
666 993 0.109532 CCACACCACACCACACCATA 59.890 55.000 0.00 0.00 0.00 2.74
667 994 1.152777 CCACACCACACCACACCAT 60.153 57.895 0.00 0.00 0.00 3.55
668 995 2.273776 CCACACCACACCACACCA 59.726 61.111 0.00 0.00 0.00 4.17
669 996 1.822186 GACCACACCACACCACACC 60.822 63.158 0.00 0.00 0.00 4.16
670 997 1.095228 CAGACCACACCACACCACAC 61.095 60.000 0.00 0.00 0.00 3.82
671 998 1.223211 CAGACCACACCACACCACA 59.777 57.895 0.00 0.00 0.00 4.17
672 999 1.525995 CCAGACCACACCACACCAC 60.526 63.158 0.00 0.00 0.00 4.16
697 1029 1.079503 GCCGACACTTCTGTCAATCC 58.920 55.000 2.02 0.00 46.47 3.01
704 1036 0.249868 TTCTGGTGCCGACACTTCTG 60.250 55.000 0.81 0.00 46.57 3.02
826 1162 9.178427 GCTCTGAATTTGCAGATGATTTTATAC 57.822 33.333 0.00 0.00 43.43 1.47
876 1212 0.734253 AGAGAAGCGACGATGTGTGC 60.734 55.000 0.00 0.00 0.00 4.57
880 1216 0.038251 TGCAAGAGAAGCGACGATGT 60.038 50.000 0.00 0.00 33.85 3.06
888 1224 4.298744 AGTTTGAAGTTGCAAGAGAAGC 57.701 40.909 0.00 0.00 0.00 3.86
940 1298 2.427453 CTCTTCTAAGCTAACTCGGGCA 59.573 50.000 0.00 0.00 0.00 5.36
942 1300 3.025262 ACCTCTTCTAAGCTAACTCGGG 58.975 50.000 0.00 0.00 0.00 5.14
956 1314 0.108945 GCCTGCAATGCAACCTCTTC 60.109 55.000 9.92 0.00 38.41 2.87
958 1316 1.228644 TGCCTGCAATGCAACCTCT 60.229 52.632 9.92 0.00 38.41 3.69
983 1341 0.105593 CATCGATCACCCTGTCCCTG 59.894 60.000 0.00 0.00 0.00 4.45
984 1342 0.032117 TCATCGATCACCCTGTCCCT 60.032 55.000 0.00 0.00 0.00 4.20
985 1343 1.051812 ATCATCGATCACCCTGTCCC 58.948 55.000 0.00 0.00 0.00 4.46
986 1344 1.688735 TCATCATCGATCACCCTGTCC 59.311 52.381 0.00 0.00 0.00 4.02
987 1345 3.006217 TCATCATCATCGATCACCCTGTC 59.994 47.826 0.00 0.00 0.00 3.51
988 1346 2.967887 TCATCATCATCGATCACCCTGT 59.032 45.455 0.00 0.00 0.00 4.00
1414 1778 2.870119 CGTACACCCACCGTCCCAA 61.870 63.158 0.00 0.00 0.00 4.12
1419 1783 1.067916 GTTGTCGTACACCCACCGT 59.932 57.895 0.00 0.00 0.00 4.83
1438 1802 2.760385 GTAGAGCGGCTGGGAGGT 60.760 66.667 7.50 0.00 0.00 3.85
1592 1956 7.011763 TCTTTCTAGAGAAACATGCATGTATGC 59.988 37.037 31.55 22.05 44.69 3.14
1625 1989 4.636249 AGCTAGAAAACCACTCTCAACTG 58.364 43.478 0.00 0.00 0.00 3.16
1666 2036 4.554526 CGTGCTGCATTTCTTAGTTGTTGA 60.555 41.667 5.27 0.00 0.00 3.18
1688 2059 5.231568 GTGCAGTACTATGTAGTTTTAGGCG 59.768 44.000 0.00 0.00 37.73 5.52
1743 2114 7.870445 CCCCAAGAGTTCAATTTCGAAATTTTA 59.130 33.333 28.91 18.93 36.52 1.52
1799 2177 7.182060 AGACCAAGCTAAGATTTTAATTCCCA 58.818 34.615 0.00 0.00 0.00 4.37
1855 2253 9.006839 TCTCATATATGATTTGTTCCATTGCTC 57.993 33.333 15.71 0.00 36.02 4.26
1905 2327 2.435586 CTGCCCTCTGGTTCAGCG 60.436 66.667 0.00 0.00 0.00 5.18
2044 2470 5.606505 TGCTATTGACACTTTGACAGTACA 58.393 37.500 0.00 0.00 32.76 2.90
2138 2564 1.201429 TCTTTGGGGAGCAGAGGGAC 61.201 60.000 0.00 0.00 0.00 4.46
2140 2566 1.301293 GTCTTTGGGGAGCAGAGGG 59.699 63.158 0.00 0.00 0.00 4.30
2161 2587 7.610580 TCCATTAATTCCTTTGTGTTCCTTT 57.389 32.000 0.00 0.00 0.00 3.11
2162 2588 7.797121 ATCCATTAATTCCTTTGTGTTCCTT 57.203 32.000 0.00 0.00 0.00 3.36
2163 2589 8.116026 ACTATCCATTAATTCCTTTGTGTTCCT 58.884 33.333 0.00 0.00 0.00 3.36
2164 2590 8.190784 CACTATCCATTAATTCCTTTGTGTTCC 58.809 37.037 0.00 0.00 0.00 3.62
2165 2591 8.956426 TCACTATCCATTAATTCCTTTGTGTTC 58.044 33.333 0.00 0.00 0.00 3.18
2166 2592 8.877864 TCACTATCCATTAATTCCTTTGTGTT 57.122 30.769 0.00 0.00 0.00 3.32
2167 2593 8.877864 TTCACTATCCATTAATTCCTTTGTGT 57.122 30.769 0.00 0.00 0.00 3.72
2168 2594 9.793252 CTTTCACTATCCATTAATTCCTTTGTG 57.207 33.333 0.00 0.00 0.00 3.33
2169 2595 9.753674 TCTTTCACTATCCATTAATTCCTTTGT 57.246 29.630 0.00 0.00 0.00 2.83
2479 2905 6.036470 CGATCAGCTAACAGAAAGTGTCATA 58.964 40.000 0.00 0.00 39.03 2.15
2483 2909 4.489810 CTCGATCAGCTAACAGAAAGTGT 58.510 43.478 0.00 0.00 43.24 3.55
2494 2920 0.457443 CAGTGTGCCTCGATCAGCTA 59.543 55.000 0.00 0.00 0.00 3.32
2564 2990 1.523758 GGTTGTCGCTGTTGGATTCT 58.476 50.000 0.00 0.00 0.00 2.40
2749 3175 0.929615 CTTTTGTTGGCAAGCAACGG 59.070 50.000 0.00 0.85 35.82 4.44
2751 3177 2.307934 TCCTTTTGTTGGCAAGCAAC 57.692 45.000 0.00 0.00 35.82 4.17
2821 3247 6.661805 TGTTACTAATTCCAAATCCCAGTTCC 59.338 38.462 0.00 0.00 0.00 3.62
2888 3321 2.492881 CAAATGAGCCATACCTGCACAA 59.507 45.455 0.00 0.00 33.15 3.33
2902 3335 3.284617 TGCATCACCATCCTCAAATGAG 58.715 45.455 3.37 3.37 41.71 2.90
2983 3416 3.310860 GACGTTCGCTCCCACCCAT 62.311 63.158 0.00 0.00 0.00 4.00
3013 3446 3.063997 ACGAGCCTGCGAAATAGATTTTG 59.936 43.478 0.00 0.00 34.89 2.44
3072 3505 3.560068 CAGGTTTAACGGCTGATGGATAC 59.440 47.826 0.00 0.00 0.00 2.24
3082 3515 2.550606 TCATGTTGTCAGGTTTAACGGC 59.449 45.455 0.00 0.00 0.00 5.68
3100 3533 9.979578 TTGTAAATTTAATCTGTTGCTTGTCAT 57.020 25.926 0.00 0.00 0.00 3.06
3135 3568 8.686334 AGTTTGTTTATGTGTGAGAAGATTGTT 58.314 29.630 0.00 0.00 0.00 2.83
3293 3726 1.073897 GCCTTTCTGCTCCAGTGGT 59.926 57.895 9.54 0.00 32.61 4.16
3470 3903 3.372795 GAAGTGGTTCCACACGTCA 57.627 52.632 21.71 0.00 45.26 4.35
3683 4121 4.527944 TCCACATAGGAGTACTGTCTCAG 58.472 47.826 0.00 0.00 43.07 3.35
3700 4138 4.540099 ACATCTCCTTAATCCCTTTCCACA 59.460 41.667 0.00 0.00 0.00 4.17
3795 4233 2.101750 TCGCCTAGCATATTCCGTTTCA 59.898 45.455 0.00 0.00 0.00 2.69
3806 4244 2.498167 CCAAGCTTAATCGCCTAGCAT 58.502 47.619 0.00 0.00 37.37 3.79
3859 4303 2.467566 TTTTAAGACGGAGGGAGTGC 57.532 50.000 0.00 0.00 0.00 4.40
3860 4304 5.581085 CACTTATTTTAAGACGGAGGGAGTG 59.419 44.000 1.47 0.00 0.00 3.51
3861 4305 5.247792 ACACTTATTTTAAGACGGAGGGAGT 59.752 40.000 1.47 0.00 0.00 3.85
3862 4306 5.731591 ACACTTATTTTAAGACGGAGGGAG 58.268 41.667 1.47 0.00 0.00 4.30
3863 4307 5.482878 AGACACTTATTTTAAGACGGAGGGA 59.517 40.000 1.47 0.00 0.00 4.20
3864 4308 5.731591 AGACACTTATTTTAAGACGGAGGG 58.268 41.667 1.47 0.00 0.00 4.30
3865 4309 6.395629 TGAGACACTTATTTTAAGACGGAGG 58.604 40.000 1.47 0.00 0.00 4.30
3866 4310 7.148623 GGTTGAGACACTTATTTTAAGACGGAG 60.149 40.741 1.47 0.00 0.00 4.63
3867 4311 6.647895 GGTTGAGACACTTATTTTAAGACGGA 59.352 38.462 1.47 0.00 0.00 4.69
3868 4312 6.649557 AGGTTGAGACACTTATTTTAAGACGG 59.350 38.462 1.47 0.00 0.00 4.79
3869 4313 7.653767 AGGTTGAGACACTTATTTTAAGACG 57.346 36.000 1.47 0.00 0.00 4.18
3870 4314 8.837389 ACAAGGTTGAGACACTTATTTTAAGAC 58.163 33.333 0.00 0.00 0.00 3.01
3871 4315 8.974060 ACAAGGTTGAGACACTTATTTTAAGA 57.026 30.769 0.00 0.00 0.00 2.10
3873 4317 9.841295 AGTACAAGGTTGAGACACTTATTTTAA 57.159 29.630 0.00 0.00 0.00 1.52
3875 4319 9.841295 TTAGTACAAGGTTGAGACACTTATTTT 57.159 29.630 0.00 0.00 0.00 1.82
3876 4320 9.269453 GTTAGTACAAGGTTGAGACACTTATTT 57.731 33.333 0.00 0.00 0.00 1.40
3877 4321 8.648693 AGTTAGTACAAGGTTGAGACACTTATT 58.351 33.333 0.00 0.00 0.00 1.40
3878 4322 8.191534 AGTTAGTACAAGGTTGAGACACTTAT 57.808 34.615 0.00 0.00 0.00 1.73
3879 4323 7.592885 AGTTAGTACAAGGTTGAGACACTTA 57.407 36.000 0.00 0.00 0.00 2.24
3880 4324 6.481434 AGTTAGTACAAGGTTGAGACACTT 57.519 37.500 0.00 0.00 0.00 3.16
3881 4325 6.481434 AAGTTAGTACAAGGTTGAGACACT 57.519 37.500 0.00 0.00 0.00 3.55
3882 4326 7.707893 TGTAAAGTTAGTACAAGGTTGAGACAC 59.292 37.037 0.00 0.00 0.00 3.67
3883 4327 7.784037 TGTAAAGTTAGTACAAGGTTGAGACA 58.216 34.615 0.00 0.00 0.00 3.41
3884 4328 8.652810 TTGTAAAGTTAGTACAAGGTTGAGAC 57.347 34.615 0.00 0.00 36.71 3.36
3885 4329 9.321562 CTTTGTAAAGTTAGTACAAGGTTGAGA 57.678 33.333 0.00 0.00 41.26 3.27
3886 4330 9.106070 ACTTTGTAAAGTTAGTACAAGGTTGAG 57.894 33.333 8.60 3.41 44.61 3.02
3904 4348 9.616156 TGTCTCAACCTTAATACAACTTTGTAA 57.384 29.630 5.94 0.00 45.74 2.41
3905 4349 9.048446 GTGTCTCAACCTTAATACAACTTTGTA 57.952 33.333 4.34 4.34 46.55 2.41
3906 4350 7.773690 AGTGTCTCAACCTTAATACAACTTTGT 59.226 33.333 0.00 0.00 44.86 2.83
3907 4351 8.154649 AGTGTCTCAACCTTAATACAACTTTG 57.845 34.615 0.00 0.00 0.00 2.77
3908 4352 8.747538 AAGTGTCTCAACCTTAATACAACTTT 57.252 30.769 0.00 0.00 0.00 2.66
3909 4353 9.841295 TTAAGTGTCTCAACCTTAATACAACTT 57.159 29.630 0.00 0.00 30.16 2.66
3910 4354 9.841295 TTTAAGTGTCTCAACCTTAATACAACT 57.159 29.630 0.00 0.00 32.78 3.16
3913 4357 9.485206 GTCTTTAAGTGTCTCAACCTTAATACA 57.515 33.333 0.00 0.00 32.78 2.29
3914 4358 8.645487 CGTCTTTAAGTGTCTCAACCTTAATAC 58.355 37.037 0.00 0.00 32.78 1.89
3915 4359 7.816031 CCGTCTTTAAGTGTCTCAACCTTAATA 59.184 37.037 0.00 0.00 32.78 0.98
3916 4360 6.649557 CCGTCTTTAAGTGTCTCAACCTTAAT 59.350 38.462 0.00 0.00 32.78 1.40
3917 4361 5.987347 CCGTCTTTAAGTGTCTCAACCTTAA 59.013 40.000 0.00 0.00 31.75 1.85
3918 4362 5.302568 TCCGTCTTTAAGTGTCTCAACCTTA 59.697 40.000 0.00 0.00 0.00 2.69
3919 4363 4.100498 TCCGTCTTTAAGTGTCTCAACCTT 59.900 41.667 0.00 0.00 0.00 3.50
3920 4364 3.640029 TCCGTCTTTAAGTGTCTCAACCT 59.360 43.478 0.00 0.00 0.00 3.50
3921 4365 3.986277 TCCGTCTTTAAGTGTCTCAACC 58.014 45.455 0.00 0.00 0.00 3.77
3922 4366 3.988517 CCTCCGTCTTTAAGTGTCTCAAC 59.011 47.826 0.00 0.00 0.00 3.18
3923 4367 3.006537 CCCTCCGTCTTTAAGTGTCTCAA 59.993 47.826 0.00 0.00 0.00 3.02
3924 4368 2.561419 CCCTCCGTCTTTAAGTGTCTCA 59.439 50.000 0.00 0.00 0.00 3.27
3925 4369 2.824341 TCCCTCCGTCTTTAAGTGTCTC 59.176 50.000 0.00 0.00 0.00 3.36
3926 4370 2.826725 CTCCCTCCGTCTTTAAGTGTCT 59.173 50.000 0.00 0.00 0.00 3.41
3927 4371 2.561858 ACTCCCTCCGTCTTTAAGTGTC 59.438 50.000 0.00 0.00 0.00 3.67
3928 4372 2.606378 ACTCCCTCCGTCTTTAAGTGT 58.394 47.619 0.00 0.00 0.00 3.55
3929 4373 4.159879 ACATACTCCCTCCGTCTTTAAGTG 59.840 45.833 0.00 0.00 0.00 3.16
3930 4374 4.159879 CACATACTCCCTCCGTCTTTAAGT 59.840 45.833 0.00 0.00 0.00 2.24
3931 4375 4.441634 CCACATACTCCCTCCGTCTTTAAG 60.442 50.000 0.00 0.00 0.00 1.85
3932 4376 3.449737 CCACATACTCCCTCCGTCTTTAA 59.550 47.826 0.00 0.00 0.00 1.52
3933 4377 3.028850 CCACATACTCCCTCCGTCTTTA 58.971 50.000 0.00 0.00 0.00 1.85
3934 4378 1.831736 CCACATACTCCCTCCGTCTTT 59.168 52.381 0.00 0.00 0.00 2.52
3935 4379 1.273098 ACCACATACTCCCTCCGTCTT 60.273 52.381 0.00 0.00 0.00 3.01
3936 4380 0.335361 ACCACATACTCCCTCCGTCT 59.665 55.000 0.00 0.00 0.00 4.18
3937 4381 0.460311 CACCACATACTCCCTCCGTC 59.540 60.000 0.00 0.00 0.00 4.79
3938 4382 0.976073 CCACCACATACTCCCTCCGT 60.976 60.000 0.00 0.00 0.00 4.69
3939 4383 1.686325 CCCACCACATACTCCCTCCG 61.686 65.000 0.00 0.00 0.00 4.63
3940 4384 0.326238 TCCCACCACATACTCCCTCC 60.326 60.000 0.00 0.00 0.00 4.30
3941 4385 1.580059 TTCCCACCACATACTCCCTC 58.420 55.000 0.00 0.00 0.00 4.30
3942 4386 2.286935 ATTCCCACCACATACTCCCT 57.713 50.000 0.00 0.00 0.00 4.20
3943 4387 3.458487 ACTAATTCCCACCACATACTCCC 59.542 47.826 0.00 0.00 0.00 4.30
3944 4388 4.163458 TCACTAATTCCCACCACATACTCC 59.837 45.833 0.00 0.00 0.00 3.85
3945 4389 5.353394 TCACTAATTCCCACCACATACTC 57.647 43.478 0.00 0.00 0.00 2.59
3946 4390 5.191722 ACATCACTAATTCCCACCACATACT 59.808 40.000 0.00 0.00 0.00 2.12
3949 4393 4.018506 TCACATCACTAATTCCCACCACAT 60.019 41.667 0.00 0.00 0.00 3.21
4068 4514 0.610232 AATCAGCTCTTGCCACACCC 60.610 55.000 0.00 0.00 40.80 4.61
4148 4599 6.983890 GCTGTATTTCAACCCTCAAAGAAAAA 59.016 34.615 0.00 0.00 34.13 1.94
4149 4600 6.323739 AGCTGTATTTCAACCCTCAAAGAAAA 59.676 34.615 0.00 0.00 34.13 2.29
4150 4601 5.833131 AGCTGTATTTCAACCCTCAAAGAAA 59.167 36.000 0.00 0.00 34.83 2.52
4151 4602 5.385198 AGCTGTATTTCAACCCTCAAAGAA 58.615 37.500 0.00 0.00 0.00 2.52
4152 4603 4.985538 AGCTGTATTTCAACCCTCAAAGA 58.014 39.130 0.00 0.00 0.00 2.52
4153 4604 6.817765 TTAGCTGTATTTCAACCCTCAAAG 57.182 37.500 0.00 0.00 0.00 2.77
4154 4605 7.121168 CAGATTAGCTGTATTTCAACCCTCAAA 59.879 37.037 0.00 0.00 39.85 2.69
4155 4606 6.599244 CAGATTAGCTGTATTTCAACCCTCAA 59.401 38.462 0.00 0.00 39.85 3.02
4156 4607 6.070251 TCAGATTAGCTGTATTTCAACCCTCA 60.070 38.462 0.00 0.00 45.14 3.86
4157 4608 6.349300 TCAGATTAGCTGTATTTCAACCCTC 58.651 40.000 0.00 0.00 45.14 4.30
4158 4609 6.313519 TCAGATTAGCTGTATTTCAACCCT 57.686 37.500 0.00 0.00 45.14 4.34
4159 4610 7.573968 AATCAGATTAGCTGTATTTCAACCC 57.426 36.000 0.00 0.00 45.14 4.11
4160 4611 8.560374 GGTAATCAGATTAGCTGTATTTCAACC 58.440 37.037 20.68 6.21 45.14 3.77
4161 4612 8.560374 GGGTAATCAGATTAGCTGTATTTCAAC 58.440 37.037 24.88 7.08 45.14 3.18
4162 4613 8.494433 AGGGTAATCAGATTAGCTGTATTTCAA 58.506 33.333 24.88 0.00 45.14 2.69
4163 4614 7.933577 CAGGGTAATCAGATTAGCTGTATTTCA 59.066 37.037 24.88 0.00 45.14 2.69
4164 4615 7.389053 CCAGGGTAATCAGATTAGCTGTATTTC 59.611 40.741 24.88 11.46 45.14 2.17
4165 4616 7.072454 TCCAGGGTAATCAGATTAGCTGTATTT 59.928 37.037 24.88 7.74 45.14 1.40
4166 4617 6.558775 TCCAGGGTAATCAGATTAGCTGTATT 59.441 38.462 24.88 9.05 45.14 1.89
4167 4618 6.014156 GTCCAGGGTAATCAGATTAGCTGTAT 60.014 42.308 24.88 11.19 45.14 2.29
4168 4619 5.304614 GTCCAGGGTAATCAGATTAGCTGTA 59.695 44.000 24.88 10.76 45.14 2.74
4169 4620 4.101741 GTCCAGGGTAATCAGATTAGCTGT 59.898 45.833 24.88 14.09 45.14 4.40
4170 4621 4.346418 AGTCCAGGGTAATCAGATTAGCTG 59.654 45.833 24.88 20.37 46.31 4.24
4171 4622 4.561752 AGTCCAGGGTAATCAGATTAGCT 58.438 43.478 24.88 12.83 41.61 3.32
4172 4623 4.965200 AGTCCAGGGTAATCAGATTAGC 57.035 45.455 20.05 20.05 41.28 3.09
4173 4624 7.524698 GCTCTTAGTCCAGGGTAATCAGATTAG 60.525 44.444 2.83 0.00 0.00 1.73
4174 4625 6.267928 GCTCTTAGTCCAGGGTAATCAGATTA 59.732 42.308 0.00 0.00 0.00 1.75
4175 4626 5.071115 GCTCTTAGTCCAGGGTAATCAGATT 59.929 44.000 0.20 0.20 0.00 2.40
4176 4627 4.591072 GCTCTTAGTCCAGGGTAATCAGAT 59.409 45.833 0.00 0.00 0.00 2.90
4177 4628 3.961408 GCTCTTAGTCCAGGGTAATCAGA 59.039 47.826 0.00 0.00 0.00 3.27
4178 4629 3.706594 TGCTCTTAGTCCAGGGTAATCAG 59.293 47.826 0.00 0.00 0.00 2.90
4179 4630 3.719871 TGCTCTTAGTCCAGGGTAATCA 58.280 45.455 0.00 0.00 0.00 2.57
4180 4631 4.591072 AGATGCTCTTAGTCCAGGGTAATC 59.409 45.833 0.00 0.00 0.00 1.75
4181 4632 4.561752 AGATGCTCTTAGTCCAGGGTAAT 58.438 43.478 0.00 0.00 0.00 1.89
4182 4633 3.961408 GAGATGCTCTTAGTCCAGGGTAA 59.039 47.826 0.00 0.00 0.00 2.85
4183 4634 3.567397 GAGATGCTCTTAGTCCAGGGTA 58.433 50.000 0.00 0.00 0.00 3.69
4184 4635 2.393646 GAGATGCTCTTAGTCCAGGGT 58.606 52.381 0.00 0.00 0.00 4.34
4185 4636 1.691434 GGAGATGCTCTTAGTCCAGGG 59.309 57.143 0.00 0.00 0.00 4.45
4186 4637 2.102252 GTGGAGATGCTCTTAGTCCAGG 59.898 54.545 0.00 0.00 37.98 4.45
4187 4638 3.030291 AGTGGAGATGCTCTTAGTCCAG 58.970 50.000 0.00 0.00 37.98 3.86
4188 4639 3.027412 GAGTGGAGATGCTCTTAGTCCA 58.973 50.000 0.00 0.00 34.86 4.02
4189 4640 2.034053 CGAGTGGAGATGCTCTTAGTCC 59.966 54.545 0.00 0.00 0.00 3.85
4190 4641 2.685897 ACGAGTGGAGATGCTCTTAGTC 59.314 50.000 0.00 0.00 0.00 2.59
4191 4642 2.729194 ACGAGTGGAGATGCTCTTAGT 58.271 47.619 0.00 0.00 0.00 2.24
4192 4643 3.701241 GAACGAGTGGAGATGCTCTTAG 58.299 50.000 0.00 0.00 0.00 2.18
4193 4644 2.097629 CGAACGAGTGGAGATGCTCTTA 59.902 50.000 0.00 0.00 0.00 2.10
4194 4645 1.135257 CGAACGAGTGGAGATGCTCTT 60.135 52.381 0.00 0.00 0.00 2.85
4195 4646 0.453793 CGAACGAGTGGAGATGCTCT 59.546 55.000 0.00 0.00 0.00 4.09
4196 4647 0.526524 CCGAACGAGTGGAGATGCTC 60.527 60.000 0.00 0.00 0.00 4.26
4197 4648 1.513158 CCGAACGAGTGGAGATGCT 59.487 57.895 0.00 0.00 0.00 3.79
4198 4649 2.167861 GCCGAACGAGTGGAGATGC 61.168 63.158 0.00 0.00 0.00 3.91
4199 4650 1.519455 GGCCGAACGAGTGGAGATG 60.519 63.158 0.00 0.00 0.00 2.90
4200 4651 1.982395 TGGCCGAACGAGTGGAGAT 60.982 57.895 0.00 0.00 0.00 2.75
4201 4652 2.599281 TGGCCGAACGAGTGGAGA 60.599 61.111 0.00 0.00 0.00 3.71
4202 4653 2.432628 GTGGCCGAACGAGTGGAG 60.433 66.667 0.00 0.00 0.00 3.86
4203 4654 3.998672 GGTGGCCGAACGAGTGGA 61.999 66.667 0.00 0.00 0.00 4.02
4205 4656 4.308458 TGGGTGGCCGAACGAGTG 62.308 66.667 0.00 0.00 0.00 3.51
4206 4657 4.003788 CTGGGTGGCCGAACGAGT 62.004 66.667 0.00 0.00 0.00 4.18
4225 4676 1.933115 AAACCACAATCGCCGGATGC 61.933 55.000 5.05 0.00 31.83 3.91
4226 4677 0.098728 GAAACCACAATCGCCGGATG 59.901 55.000 5.05 0.00 31.83 3.51
4227 4678 1.366111 CGAAACCACAATCGCCGGAT 61.366 55.000 5.05 0.00 31.71 4.18
4228 4679 2.030401 CGAAACCACAATCGCCGGA 61.030 57.895 5.05 0.00 31.71 5.14
4229 4680 2.478746 CGAAACCACAATCGCCGG 59.521 61.111 0.00 0.00 31.71 6.13
4247 4698 3.829272 AAAGGCGCTTGCGCTTGTG 62.829 57.895 33.22 9.21 40.46 3.33
4248 4699 2.627510 AAAAAGGCGCTTGCGCTTGT 62.628 50.000 33.22 22.43 40.46 3.16
4249 4700 1.950630 AAAAAGGCGCTTGCGCTTG 60.951 52.632 33.22 1.85 40.46 4.01
4250 4701 1.950630 CAAAAAGGCGCTTGCGCTT 60.951 52.632 33.22 26.46 40.46 4.68
4251 4702 2.355009 CAAAAAGGCGCTTGCGCT 60.355 55.556 33.22 19.65 40.46 5.92
4252 4703 3.405533 CCAAAAAGGCGCTTGCGC 61.406 61.111 28.67 28.67 40.46 6.09
4261 4712 2.607442 CCCCCAGGGCCAAAAAGG 60.607 66.667 6.18 0.00 35.35 3.11
4273 4724 3.407967 GGAACTGGATCGCCCCCA 61.408 66.667 0.00 0.00 0.00 4.96
4274 4725 4.191015 GGGAACTGGATCGCCCCC 62.191 72.222 0.00 0.00 34.39 5.40
4275 4726 3.406595 CTGGGAACTGGATCGCCCC 62.407 68.421 0.00 0.00 39.93 5.80
4276 4727 2.190578 CTGGGAACTGGATCGCCC 59.809 66.667 0.00 0.00 41.08 6.13
4277 4728 2.514824 GCTGGGAACTGGATCGCC 60.515 66.667 0.00 0.00 0.00 5.54
4278 4729 2.514824 GGCTGGGAACTGGATCGC 60.515 66.667 0.00 0.00 0.00 4.58
4279 4730 1.144936 GAGGCTGGGAACTGGATCG 59.855 63.158 0.00 0.00 0.00 3.69
4280 4731 1.144936 CGAGGCTGGGAACTGGATC 59.855 63.158 0.00 0.00 0.00 3.36
4281 4732 1.613630 ACGAGGCTGGGAACTGGAT 60.614 57.895 0.51 0.00 0.00 3.41
4282 4733 2.203788 ACGAGGCTGGGAACTGGA 60.204 61.111 0.51 0.00 0.00 3.86
4283 4734 2.266055 GACGAGGCTGGGAACTGG 59.734 66.667 0.51 0.00 0.00 4.00
4284 4735 2.232298 GAGGACGAGGCTGGGAACTG 62.232 65.000 0.51 0.00 0.00 3.16
4285 4736 1.985116 GAGGACGAGGCTGGGAACT 60.985 63.158 0.51 0.00 0.00 3.01
4286 4737 2.232298 CTGAGGACGAGGCTGGGAAC 62.232 65.000 0.51 0.00 0.00 3.62
4287 4738 1.984570 CTGAGGACGAGGCTGGGAA 60.985 63.158 0.51 0.00 0.00 3.97
4288 4739 2.230189 ATCTGAGGACGAGGCTGGGA 62.230 60.000 0.51 0.00 0.00 4.37
4289 4740 1.333636 AATCTGAGGACGAGGCTGGG 61.334 60.000 0.51 0.00 0.00 4.45
4290 4741 0.539051 AAATCTGAGGACGAGGCTGG 59.461 55.000 0.00 0.00 0.00 4.85
4291 4742 1.800655 CGAAATCTGAGGACGAGGCTG 60.801 57.143 0.00 0.00 0.00 4.85
4292 4743 0.457851 CGAAATCTGAGGACGAGGCT 59.542 55.000 0.00 0.00 0.00 4.58
4293 4744 0.528684 CCGAAATCTGAGGACGAGGC 60.529 60.000 0.00 0.00 0.00 4.70
4294 4745 0.528684 GCCGAAATCTGAGGACGAGG 60.529 60.000 0.00 0.00 0.00 4.63
4295 4746 0.528684 GGCCGAAATCTGAGGACGAG 60.529 60.000 0.00 0.00 0.00 4.18
4296 4747 1.515954 GGCCGAAATCTGAGGACGA 59.484 57.895 0.00 0.00 0.00 4.20
4297 4748 1.521681 GGGCCGAAATCTGAGGACG 60.522 63.158 0.00 0.00 32.67 4.79
4298 4749 1.153147 GGGGCCGAAATCTGAGGAC 60.153 63.158 0.00 0.00 0.00 3.85
4299 4750 1.204786 TTGGGGCCGAAATCTGAGGA 61.205 55.000 0.00 0.00 0.00 3.71
4300 4751 0.749454 CTTGGGGCCGAAATCTGAGG 60.749 60.000 1.68 0.00 0.00 3.86
4301 4752 0.253044 TCTTGGGGCCGAAATCTGAG 59.747 55.000 1.68 0.00 0.00 3.35
4302 4753 0.035439 GTCTTGGGGCCGAAATCTGA 60.035 55.000 1.68 0.00 0.00 3.27
4303 4754 1.369091 CGTCTTGGGGCCGAAATCTG 61.369 60.000 1.68 0.00 0.00 2.90
4304 4755 1.078426 CGTCTTGGGGCCGAAATCT 60.078 57.895 1.68 0.00 0.00 2.40
4305 4756 2.761195 GCGTCTTGGGGCCGAAATC 61.761 63.158 1.68 0.00 0.00 2.17
4306 4757 2.750237 GCGTCTTGGGGCCGAAAT 60.750 61.111 1.68 0.00 0.00 2.17
4311 4762 4.849310 TATGCGCGTCTTGGGGCC 62.849 66.667 4.79 0.00 44.43 5.80
4312 4763 2.822255 TTATGCGCGTCTTGGGGC 60.822 61.111 4.79 0.00 45.18 5.80
4313 4764 1.024579 AACTTATGCGCGTCTTGGGG 61.025 55.000 4.79 0.00 0.00 4.96
4314 4765 0.373716 GAACTTATGCGCGTCTTGGG 59.626 55.000 4.79 0.00 0.00 4.12
4315 4766 1.075542 TGAACTTATGCGCGTCTTGG 58.924 50.000 4.79 0.00 0.00 3.61
4316 4767 2.873170 TTGAACTTATGCGCGTCTTG 57.127 45.000 4.79 0.00 0.00 3.02
4317 4768 4.419522 AATTTGAACTTATGCGCGTCTT 57.580 36.364 4.79 0.00 0.00 3.01
4318 4769 4.158384 CAAATTTGAACTTATGCGCGTCT 58.842 39.130 13.08 0.00 0.00 4.18
4319 4770 3.241333 GCAAATTTGAACTTATGCGCGTC 60.241 43.478 22.31 0.00 0.00 5.19
4320 4771 2.661195 GCAAATTTGAACTTATGCGCGT 59.339 40.909 22.31 7.55 0.00 6.01
4321 4772 2.027926 GGCAAATTTGAACTTATGCGCG 59.972 45.455 22.31 0.00 34.73 6.86
4322 4773 2.992543 TGGCAAATTTGAACTTATGCGC 59.007 40.909 22.31 0.00 34.73 6.09
4323 4774 5.783100 AATGGCAAATTTGAACTTATGCG 57.217 34.783 22.31 0.00 34.73 4.73
4324 4775 7.368480 AGAAATGGCAAATTTGAACTTATGC 57.632 32.000 22.31 4.10 0.00 3.14
4325 4776 7.669098 CGAGAAATGGCAAATTTGAACTTATG 58.331 34.615 22.31 0.00 0.00 1.90
4326 4777 6.311200 GCGAGAAATGGCAAATTTGAACTTAT 59.689 34.615 22.31 6.05 0.00 1.73
4327 4778 5.633182 GCGAGAAATGGCAAATTTGAACTTA 59.367 36.000 22.31 2.92 0.00 2.24
4328 4779 4.448732 GCGAGAAATGGCAAATTTGAACTT 59.551 37.500 22.31 8.41 0.00 2.66
4329 4780 3.989817 GCGAGAAATGGCAAATTTGAACT 59.010 39.130 22.31 9.90 0.00 3.01
4330 4781 3.989817 AGCGAGAAATGGCAAATTTGAAC 59.010 39.130 22.31 13.46 0.00 3.18
4331 4782 4.255833 AGCGAGAAATGGCAAATTTGAA 57.744 36.364 22.31 9.27 0.00 2.69
4332 4783 3.940209 AGCGAGAAATGGCAAATTTGA 57.060 38.095 22.31 1.94 0.00 2.69
4333 4784 4.484236 TGTAGCGAGAAATGGCAAATTTG 58.516 39.130 14.03 14.03 0.00 2.32
4334 4785 4.782019 TGTAGCGAGAAATGGCAAATTT 57.218 36.364 0.00 0.00 0.00 1.82
4335 4786 4.782019 TTGTAGCGAGAAATGGCAAATT 57.218 36.364 0.00 0.00 0.00 1.82
4336 4787 4.782019 TTTGTAGCGAGAAATGGCAAAT 57.218 36.364 0.00 0.00 0.00 2.32
4337 4788 4.576216 TTTTGTAGCGAGAAATGGCAAA 57.424 36.364 0.00 0.00 0.00 3.68
4338 4789 4.576216 TTTTTGTAGCGAGAAATGGCAA 57.424 36.364 0.00 0.00 0.00 4.52
4365 4816 0.165944 GTTGATCGCCGAACTTGTGG 59.834 55.000 0.00 0.00 0.00 4.17
4366 4817 0.179250 CGTTGATCGCCGAACTTGTG 60.179 55.000 0.00 0.00 0.00 3.33
4367 4818 1.289109 CCGTTGATCGCCGAACTTGT 61.289 55.000 5.50 0.00 38.35 3.16
4368 4819 1.419922 CCGTTGATCGCCGAACTTG 59.580 57.895 5.50 0.00 38.35 3.16
4369 4820 2.388232 GCCGTTGATCGCCGAACTT 61.388 57.895 5.50 0.00 38.35 2.66
4370 4821 2.813908 GCCGTTGATCGCCGAACT 60.814 61.111 5.50 0.00 38.35 3.01
4371 4822 2.813908 AGCCGTTGATCGCCGAAC 60.814 61.111 5.50 0.00 38.35 3.95
4372 4823 2.813474 CAGCCGTTGATCGCCGAA 60.813 61.111 5.50 0.00 38.35 4.30
4376 4827 4.166011 GTGGCAGCCGTTGATCGC 62.166 66.667 7.03 0.00 38.35 4.58
4377 4828 1.851021 TTTGTGGCAGCCGTTGATCG 61.851 55.000 7.03 0.00 39.52 3.69
4378 4829 0.313672 TTTTGTGGCAGCCGTTGATC 59.686 50.000 7.03 0.00 0.00 2.92
4379 4830 0.314935 CTTTTGTGGCAGCCGTTGAT 59.685 50.000 7.03 0.00 0.00 2.57
4380 4831 1.034838 ACTTTTGTGGCAGCCGTTGA 61.035 50.000 7.03 0.00 0.00 3.18
4381 4832 0.179113 AACTTTTGTGGCAGCCGTTG 60.179 50.000 7.03 0.00 0.00 4.10
4382 4833 0.534873 AAACTTTTGTGGCAGCCGTT 59.465 45.000 7.03 0.12 0.00 4.44
4383 4834 0.179113 CAAACTTTTGTGGCAGCCGT 60.179 50.000 7.03 0.00 33.59 5.68
4384 4835 0.875474 CCAAACTTTTGTGGCAGCCG 60.875 55.000 7.03 0.00 36.45 5.52
4385 4836 2.990642 CCAAACTTTTGTGGCAGCC 58.009 52.632 3.66 3.66 36.45 4.85
4390 4841 2.393764 GTGATCGCCAAACTTTTGTGG 58.606 47.619 0.00 0.00 36.45 4.17
4391 4842 2.223688 TGGTGATCGCCAAACTTTTGTG 60.224 45.455 25.67 0.00 36.45 3.33
4392 4843 2.028130 TGGTGATCGCCAAACTTTTGT 58.972 42.857 25.67 0.00 36.45 2.83
4393 4844 2.791383 TGGTGATCGCCAAACTTTTG 57.209 45.000 25.67 0.00 35.25 2.44
4394 4845 5.659440 ATAATGGTGATCGCCAAACTTTT 57.341 34.783 30.71 21.38 42.48 2.27
4395 4846 5.885912 ACTATAATGGTGATCGCCAAACTTT 59.114 36.000 30.71 21.73 42.48 2.66
4396 4847 5.437060 ACTATAATGGTGATCGCCAAACTT 58.563 37.500 30.71 22.06 42.48 2.66
4397 4848 5.036117 ACTATAATGGTGATCGCCAAACT 57.964 39.130 30.71 19.78 42.48 2.66
4398 4849 5.558273 CGAACTATAATGGTGATCGCCAAAC 60.558 44.000 30.71 14.25 42.48 2.93
4399 4850 4.509970 CGAACTATAATGGTGATCGCCAAA 59.490 41.667 30.71 21.68 42.48 3.28
4400 4851 4.055360 CGAACTATAATGGTGATCGCCAA 58.945 43.478 30.71 16.75 42.48 4.52
4401 4852 3.554129 CCGAACTATAATGGTGATCGCCA 60.554 47.826 29.37 29.37 43.48 5.69
4402 4853 2.993899 CCGAACTATAATGGTGATCGCC 59.006 50.000 18.84 18.84 0.00 5.54
4403 4854 2.412089 GCCGAACTATAATGGTGATCGC 59.588 50.000 0.00 0.00 0.00 4.58
4404 4855 2.661675 CGCCGAACTATAATGGTGATCG 59.338 50.000 0.00 0.00 33.86 3.69
4405 4856 3.909430 TCGCCGAACTATAATGGTGATC 58.091 45.455 0.00 0.00 36.16 2.92
4406 4857 4.537135 ATCGCCGAACTATAATGGTGAT 57.463 40.909 0.00 0.54 44.21 3.06
4407 4858 3.319689 TGATCGCCGAACTATAATGGTGA 59.680 43.478 0.00 0.00 44.37 4.02
4408 4859 3.649073 TGATCGCCGAACTATAATGGTG 58.351 45.455 0.00 0.00 0.00 4.17
4409 4860 4.330944 TTGATCGCCGAACTATAATGGT 57.669 40.909 0.00 0.00 0.00 3.55
4410 4861 4.509970 TGTTTGATCGCCGAACTATAATGG 59.490 41.667 0.00 0.00 39.42 3.16
4411 4862 5.651172 TGTTTGATCGCCGAACTATAATG 57.349 39.130 0.00 0.00 39.42 1.90
4412 4863 7.152645 AGTATGTTTGATCGCCGAACTATAAT 58.847 34.615 0.00 0.00 39.42 1.28
4413 4864 6.509656 AGTATGTTTGATCGCCGAACTATAA 58.490 36.000 0.00 0.00 39.42 0.98
4414 4865 6.080648 AGTATGTTTGATCGCCGAACTATA 57.919 37.500 0.00 4.07 39.42 1.31
4415 4866 4.945246 AGTATGTTTGATCGCCGAACTAT 58.055 39.130 0.00 4.72 39.42 2.12
4416 4867 4.357142 GAGTATGTTTGATCGCCGAACTA 58.643 43.478 0.00 0.00 39.42 2.24
4417 4868 3.187700 GAGTATGTTTGATCGCCGAACT 58.812 45.455 0.00 0.00 39.42 3.01
4418 4869 2.034842 CGAGTATGTTTGATCGCCGAAC 60.035 50.000 0.00 0.00 39.19 3.95
4419 4870 2.159352 TCGAGTATGTTTGATCGCCGAA 60.159 45.455 0.00 0.00 35.23 4.30
4420 4871 1.402613 TCGAGTATGTTTGATCGCCGA 59.597 47.619 0.00 0.00 35.23 5.54
4421 4872 1.835121 TCGAGTATGTTTGATCGCCG 58.165 50.000 0.00 0.00 35.23 6.46
4422 4873 3.617263 ACTTTCGAGTATGTTTGATCGCC 59.383 43.478 0.00 0.00 35.23 5.54
4423 4874 4.842139 ACTTTCGAGTATGTTTGATCGC 57.158 40.909 0.00 0.00 35.23 4.58
4439 4890 2.032426 TCCTTTTGAACGCCGAACTTTC 59.968 45.455 0.00 0.00 0.00 2.62
4440 4891 2.018515 TCCTTTTGAACGCCGAACTTT 58.981 42.857 0.00 0.00 0.00 2.66
4441 4892 1.670791 TCCTTTTGAACGCCGAACTT 58.329 45.000 0.00 0.00 0.00 2.66
4442 4893 1.602377 CTTCCTTTTGAACGCCGAACT 59.398 47.619 0.00 0.00 0.00 3.01
4443 4894 1.334689 CCTTCCTTTTGAACGCCGAAC 60.335 52.381 0.00 0.00 0.00 3.95
4444 4895 0.948678 CCTTCCTTTTGAACGCCGAA 59.051 50.000 0.00 0.00 0.00 4.30
4445 4896 0.107081 TCCTTCCTTTTGAACGCCGA 59.893 50.000 0.00 0.00 0.00 5.54
4446 4897 0.237498 GTCCTTCCTTTTGAACGCCG 59.763 55.000 0.00 0.00 0.00 6.46
4447 4898 0.237498 CGTCCTTCCTTTTGAACGCC 59.763 55.000 0.00 0.00 0.00 5.68
4448 4899 0.385598 GCGTCCTTCCTTTTGAACGC 60.386 55.000 1.78 1.78 38.33 4.84
4449 4900 0.110823 CGCGTCCTTCCTTTTGAACG 60.111 55.000 0.00 0.00 0.00 3.95
4450 4901 0.385598 GCGCGTCCTTCCTTTTGAAC 60.386 55.000 8.43 0.00 0.00 3.18
4451 4902 0.816018 TGCGCGTCCTTCCTTTTGAA 60.816 50.000 8.43 0.00 0.00 2.69
4452 4903 1.227704 TGCGCGTCCTTCCTTTTGA 60.228 52.632 8.43 0.00 0.00 2.69
4453 4904 1.207593 CTGCGCGTCCTTCCTTTTG 59.792 57.895 8.43 0.00 0.00 2.44
4454 4905 1.966451 CCTGCGCGTCCTTCCTTTT 60.966 57.895 8.43 0.00 0.00 2.27
4455 4906 2.358737 CCTGCGCGTCCTTCCTTT 60.359 61.111 8.43 0.00 0.00 3.11
4456 4907 2.391724 TTTCCTGCGCGTCCTTCCTT 62.392 55.000 8.43 0.00 0.00 3.36
4457 4908 2.879233 TTTCCTGCGCGTCCTTCCT 61.879 57.895 8.43 0.00 0.00 3.36
4458 4909 2.358247 TTTCCTGCGCGTCCTTCC 60.358 61.111 8.43 0.00 0.00 3.46
4459 4910 2.861006 GTTTCCTGCGCGTCCTTC 59.139 61.111 8.43 0.00 0.00 3.46
4460 4911 3.041940 CGTTTCCTGCGCGTCCTT 61.042 61.111 8.43 0.00 0.00 3.36
4467 4918 1.059657 CGTTTGATGCGTTTCCTGCG 61.060 55.000 0.00 0.00 34.24 5.18
4468 4919 0.237235 TCGTTTGATGCGTTTCCTGC 59.763 50.000 0.00 0.00 0.00 4.85
4469 4920 1.721489 CGTCGTTTGATGCGTTTCCTG 60.721 52.381 0.00 0.00 0.00 3.86
4470 4921 0.511221 CGTCGTTTGATGCGTTTCCT 59.489 50.000 0.00 0.00 0.00 3.36
4471 4922 0.452122 CCGTCGTTTGATGCGTTTCC 60.452 55.000 0.00 0.00 0.00 3.13
4472 4923 1.058057 GCCGTCGTTTGATGCGTTTC 61.058 55.000 0.00 0.00 0.00 2.78
4473 4924 1.082366 GCCGTCGTTTGATGCGTTT 60.082 52.632 0.00 0.00 0.00 3.60
4474 4925 2.170260 CTGCCGTCGTTTGATGCGTT 62.170 55.000 0.00 0.00 0.00 4.84
4475 4926 2.663520 TGCCGTCGTTTGATGCGT 60.664 55.556 0.00 0.00 0.00 5.24
4476 4927 2.096406 CTGCCGTCGTTTGATGCG 59.904 61.111 0.00 0.00 0.00 4.73
4477 4928 2.480555 CCTGCCGTCGTTTGATGC 59.519 61.111 0.00 0.00 0.00 3.91
4478 4929 1.970917 GAGCCTGCCGTCGTTTGATG 61.971 60.000 0.00 0.00 0.00 3.07
4479 4930 1.741770 GAGCCTGCCGTCGTTTGAT 60.742 57.895 0.00 0.00 0.00 2.57
4480 4931 2.357034 GAGCCTGCCGTCGTTTGA 60.357 61.111 0.00 0.00 0.00 2.69
4481 4932 3.423154 GGAGCCTGCCGTCGTTTG 61.423 66.667 0.00 0.00 0.00 2.93
4482 4933 3.591254 GAGGAGCCTGCCGTCGTTT 62.591 63.158 0.00 0.00 0.00 3.60
4483 4934 4.070552 GAGGAGCCTGCCGTCGTT 62.071 66.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.