Multiple sequence alignment - TraesCS5B01G149900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G149900 chr5B 100.000 6931 0 0 1 6931 278018615 278011685 0.000000e+00 12800.0
1 TraesCS5B01G149900 chr5B 85.124 121 12 6 3515 3634 89258078 89258193 1.220000e-22 119.0
2 TraesCS5B01G149900 chr5D 94.570 2652 80 16 4316 6931 244626615 244623992 0.000000e+00 4041.0
3 TraesCS5B01G149900 chr5D 90.024 1684 56 42 171 1792 244629521 244627888 0.000000e+00 2076.0
4 TraesCS5B01G149900 chr5D 92.381 840 51 6 1883 2710 244627827 244626989 0.000000e+00 1184.0
5 TraesCS5B01G149900 chr5D 92.201 359 18 5 3627 3982 244626997 244626646 3.730000e-137 499.0
6 TraesCS5B01G149900 chr5D 91.223 319 25 2 3996 4314 337582592 337582907 1.380000e-116 431.0
7 TraesCS5B01G149900 chr5D 83.721 215 27 5 1507 1717 28881833 28881623 5.480000e-46 196.0
8 TraesCS5B01G149900 chr5D 93.204 103 4 1 6649 6751 250069717 250069618 1.560000e-31 148.0
9 TraesCS5B01G149900 chr5D 85.841 113 12 3 3515 3625 41828660 41828770 4.390000e-22 117.0
10 TraesCS5B01G149900 chr5A 89.038 2764 169 54 30 2713 328812097 328809388 0.000000e+00 3302.0
11 TraesCS5B01G149900 chr5A 96.054 1419 44 5 4684 6102 328808509 328807103 0.000000e+00 2300.0
12 TraesCS5B01G149900 chr5A 97.671 730 11 3 6204 6931 328805250 328804525 0.000000e+00 1249.0
13 TraesCS5B01G149900 chr5A 89.572 374 18 5 4316 4683 328809032 328808674 8.200000e-124 455.0
14 TraesCS5B01G149900 chr5A 92.744 317 14 4 3630 3941 328809393 328809081 3.810000e-122 449.0
15 TraesCS5B01G149900 chr5A 84.651 215 25 5 1507 1717 19541872 19541662 2.530000e-49 207.0
16 TraesCS5B01G149900 chr5A 91.346 104 8 1 6654 6756 698639725 698639622 2.610000e-29 141.0
17 TraesCS5B01G149900 chr4B 99.348 920 5 1 2708 3626 161880354 161879435 0.000000e+00 1664.0
18 TraesCS5B01G149900 chr4B 85.047 214 28 4 1507 1718 412107941 412107730 1.510000e-51 215.0
19 TraesCS5B01G149900 chr1B 95.756 919 33 4 2710 3627 604911443 604912356 0.000000e+00 1476.0
20 TraesCS5B01G149900 chr1B 91.277 321 22 5 3996 4315 357540554 357540239 3.840000e-117 433.0
21 TraesCS5B01G149900 chr7B 91.241 411 23 12 2708 3114 87205159 87204758 1.310000e-151 547.0
22 TraesCS5B01G149900 chr7B 90.154 325 28 3 3995 4318 270897083 270897404 2.990000e-113 420.0
23 TraesCS5B01G149900 chr7B 83.297 461 39 17 3116 3561 87200477 87200040 2.340000e-104 390.0
24 TraesCS5B01G149900 chr7B 82.278 158 20 7 3474 3626 675025575 675025729 5.640000e-26 130.0
25 TraesCS5B01G149900 chr3B 79.940 663 105 18 5278 5929 597546513 597547158 4.900000e-126 462.0
26 TraesCS5B01G149900 chr3B 90.549 328 26 4 3989 4315 89056769 89057092 4.970000e-116 429.0
27 TraesCS5B01G149900 chr3B 90.654 321 27 2 3995 4315 646823267 646823584 2.310000e-114 424.0
28 TraesCS5B01G149900 chr3B 84.375 160 21 4 3469 3626 699099439 699099282 3.350000e-33 154.0
29 TraesCS5B01G149900 chr3B 82.443 131 21 2 4729 4858 597545843 597545972 5.680000e-21 113.0
30 TraesCS5B01G149900 chr3D 79.789 663 106 18 5278 5929 454747108 454747753 2.280000e-124 457.0
31 TraesCS5B01G149900 chr3D 90.244 328 28 3 3993 4320 165375174 165375497 6.430000e-115 425.0
32 TraesCS5B01G149900 chr3D 81.679 131 22 2 4729 4858 454746434 454746563 2.640000e-19 108.0
33 TraesCS5B01G149900 chr3A 79.758 662 108 17 5278 5929 596795384 596796029 2.280000e-124 457.0
34 TraesCS5B01G149900 chr3A 82.443 131 21 2 4729 4858 596794708 596794837 5.680000e-21 113.0
35 TraesCS5B01G149900 chr7A 92.212 321 22 2 3995 4315 433429898 433430215 1.060000e-122 451.0
36 TraesCS5B01G149900 chr7A 77.333 225 39 11 3416 3634 89607118 89606900 9.440000e-24 122.0
37 TraesCS5B01G149900 chr2B 91.358 324 24 3 3995 4318 284487110 284487429 2.290000e-119 440.0
38 TraesCS5B01G149900 chr2B 86.842 114 10 5 3515 3626 547049513 547049403 9.440000e-24 122.0
39 TraesCS5B01G149900 chr4D 90.625 320 27 2 3996 4315 34816256 34816572 8.310000e-114 422.0
40 TraesCS5B01G149900 chr4D 84.579 214 29 4 1507 1718 334118573 334118362 7.040000e-50 209.0
41 TraesCS5B01G149900 chr4D 78.700 277 53 4 4885 5158 334117682 334117409 5.520000e-41 180.0
42 TraesCS5B01G149900 chr4D 87.931 58 7 0 2710 2767 64764745 64764802 1.250000e-07 69.4
43 TraesCS5B01G149900 chr4A 84.579 214 29 4 1507 1718 139545394 139545605 7.040000e-50 209.0
44 TraesCS5B01G149900 chr4A 78.909 275 56 2 4885 5158 139546228 139546501 1.190000e-42 185.0
45 TraesCS5B01G149900 chr6A 96.591 88 3 0 6651 6738 610350227 610350314 5.600000e-31 147.0
46 TraesCS5B01G149900 chr2D 95.556 90 4 0 6654 6743 331544148 331544237 2.010000e-30 145.0
47 TraesCS5B01G149900 chr2D 92.929 99 6 1 6644 6741 15192977 15192879 7.250000e-30 143.0
48 TraesCS5B01G149900 chr6D 92.079 101 6 2 6638 6738 59623161 59623259 2.610000e-29 141.0
49 TraesCS5B01G149900 chr6D 75.897 195 43 3 5630 5822 452497514 452497322 5.720000e-16 97.1
50 TraesCS5B01G149900 chr1A 87.826 115 11 2 6638 6752 427520483 427520594 1.570000e-26 132.0
51 TraesCS5B01G149900 chr7D 86.555 119 13 2 3515 3632 210084251 210084135 2.030000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G149900 chr5B 278011685 278018615 6930 True 12800.0 12800 100.0000 1 6931 1 chr5B.!!$R1 6930
1 TraesCS5B01G149900 chr5D 244623992 244629521 5529 True 1950.0 4041 92.2940 171 6931 4 chr5D.!!$R3 6760
2 TraesCS5B01G149900 chr5A 328804525 328812097 7572 True 1551.0 3302 93.0158 30 6931 5 chr5A.!!$R3 6901
3 TraesCS5B01G149900 chr4B 161879435 161880354 919 True 1664.0 1664 99.3480 2708 3626 1 chr4B.!!$R1 918
4 TraesCS5B01G149900 chr1B 604911443 604912356 913 False 1476.0 1476 95.7560 2710 3627 1 chr1B.!!$F1 917
5 TraesCS5B01G149900 chr3B 597545843 597547158 1315 False 287.5 462 81.1915 4729 5929 2 chr3B.!!$F3 1200
6 TraesCS5B01G149900 chr3D 454746434 454747753 1319 False 282.5 457 80.7340 4729 5929 2 chr3D.!!$F2 1200
7 TraesCS5B01G149900 chr3A 596794708 596796029 1321 False 285.0 457 81.1005 4729 5929 2 chr3A.!!$F1 1200

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
498 516 0.620410 TATGTGGGAGTGGGAGTGGG 60.620 60.000 0.00 0.00 0.00 4.61 F
858 886 1.613836 AGAAGCAGAGTTGGCCAAAG 58.386 50.000 22.47 11.77 0.00 2.77 F
1986 2121 0.034767 AGTGCACAGCATAGCATGGT 60.035 50.000 21.04 1.62 43.44 3.55 F
1992 2127 1.146930 AGCATAGCATGGTCGGTGG 59.853 57.895 0.00 0.00 35.90 4.61 F
2522 2684 1.270625 TGCTTACCCCAGAGTCAAACG 60.271 52.381 0.00 0.00 0.00 3.60 F
3811 3979 1.833630 TCCATGTCTAGTTGGCTCAGG 59.166 52.381 0.00 0.00 32.80 3.86 F
4171 4345 0.256752 ATCTAGTGGCCAAGCATGCA 59.743 50.000 21.98 0.00 0.00 3.96 F
5157 5614 0.172578 CACCGCCATCTTCGACTACA 59.827 55.000 0.00 0.00 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1841 1940 0.028242 TAAGTGCAACAACGCAACCG 59.972 50.000 0.00 0.00 45.14 4.44 R
2626 2789 0.106167 TGCTCCGTGGTAGCTATCCT 60.106 55.000 0.44 0.00 40.73 3.24 R
3628 3796 2.027285 TGCACATGTTTCCTAGCTAGCA 60.027 45.455 18.83 8.18 0.00 3.49 R
3629 3797 2.632377 TGCACATGTTTCCTAGCTAGC 58.368 47.619 15.74 6.62 0.00 3.42 R
4152 4326 0.256752 TGCATGCTTGGCCACTAGAT 59.743 50.000 20.33 0.00 0.00 1.98 R
4976 5433 0.822164 GCTTAAGGTAGGAGGCGTCA 59.178 55.000 8.91 0.00 0.00 4.35 R
5720 6207 1.078426 CCTCATTGGTGGGTCGTCC 60.078 63.158 0.00 0.00 0.00 4.79 R
6387 8628 1.619654 TTTGTGGCTTGACCCATCTG 58.380 50.000 0.00 0.00 37.20 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.030075 TGTGCATCACATCTATGTTATTTGG 57.970 36.000 0.00 0.00 39.62 3.28
65 66 7.134815 GTGCATCACATCTATGTTATTTGGTC 58.865 38.462 0.00 0.00 39.39 4.02
85 88 5.054477 GGTCAAGTAGTACAAGCAACAGAA 58.946 41.667 2.52 0.00 0.00 3.02
105 108 6.892456 ACAGAAGAAGACCATCTAGATGTACA 59.108 38.462 27.03 0.00 37.11 2.90
106 109 7.563188 ACAGAAGAAGACCATCTAGATGTACAT 59.437 37.037 27.03 8.43 37.11 2.29
107 110 8.420222 CAGAAGAAGACCATCTAGATGTACATT 58.580 37.037 27.03 17.16 37.11 2.71
109 112 8.954950 AAGAAGACCATCTAGATGTACATTTG 57.045 34.615 27.03 14.59 37.11 2.32
110 113 8.311395 AGAAGACCATCTAGATGTACATTTGA 57.689 34.615 27.03 9.02 37.11 2.69
169 178 6.156519 CAGTATCCAAAAACTTTAAGGCACC 58.843 40.000 0.00 0.00 0.00 5.01
236 253 1.274447 AGCACCCACGGTTAACTAGTC 59.726 52.381 5.42 0.00 31.02 2.59
455 473 7.939784 ACGAAAGCTAAGGATCCTTTTAATT 57.060 32.000 31.45 20.39 37.47 1.40
462 480 8.870116 AGCTAAGGATCCTTTTAATTGTTGTTT 58.130 29.630 31.45 5.17 37.47 2.83
497 515 0.833287 CTATGTGGGAGTGGGAGTGG 59.167 60.000 0.00 0.00 0.00 4.00
498 516 0.620410 TATGTGGGAGTGGGAGTGGG 60.620 60.000 0.00 0.00 0.00 4.61
499 517 2.203938 GTGGGAGTGGGAGTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
500 518 2.122729 TGGGAGTGGGAGTGGGAG 59.877 66.667 0.00 0.00 0.00 4.30
501 519 2.122954 GGGAGTGGGAGTGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
502 520 2.294078 GGGAGTGGGAGTGGGAGTG 61.294 68.421 0.00 0.00 0.00 3.51
503 521 2.294078 GGAGTGGGAGTGGGAGTGG 61.294 68.421 0.00 0.00 0.00 4.00
504 522 2.203998 AGTGGGAGTGGGAGTGGG 60.204 66.667 0.00 0.00 0.00 4.61
505 523 2.203938 GTGGGAGTGGGAGTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
506 524 2.122729 TGGGAGTGGGAGTGGGAG 59.877 66.667 0.00 0.00 0.00 4.30
507 525 2.122954 GGGAGTGGGAGTGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
508 526 2.294078 GGGAGTGGGAGTGGGAGTG 61.294 68.421 0.00 0.00 0.00 3.51
556 574 3.949754 CAGCATAATTGGAAGGAAGCTCA 59.050 43.478 0.00 0.00 0.00 4.26
560 578 2.125773 ATTGGAAGGAAGCTCAGCAG 57.874 50.000 0.00 0.00 0.00 4.24
596 614 8.861033 TGATTAATAATGCAGATGAAAGCAAC 57.139 30.769 0.00 0.00 44.88 4.17
597 615 7.922278 TGATTAATAATGCAGATGAAAGCAACC 59.078 33.333 0.00 0.00 44.88 3.77
598 616 5.927281 AATAATGCAGATGAAAGCAACCT 57.073 34.783 0.00 0.00 44.88 3.50
668 696 5.051173 GCAGAGATCGTTATCACAGTCAATG 60.051 44.000 0.00 0.00 34.28 2.82
718 746 4.156477 AGGGTAGCTCTTATGATGGAGTC 58.844 47.826 0.00 0.00 32.67 3.36
727 755 5.446860 TCTTATGATGGAGTCGAGTAGGTT 58.553 41.667 0.00 0.00 0.00 3.50
738 766 4.712337 AGTCGAGTAGGTTTCATCATCCTT 59.288 41.667 0.00 0.00 33.34 3.36
739 767 4.806247 GTCGAGTAGGTTTCATCATCCTTG 59.194 45.833 0.00 0.00 33.34 3.61
740 768 4.709886 TCGAGTAGGTTTCATCATCCTTGA 59.290 41.667 0.00 0.00 36.00 3.02
858 886 1.613836 AGAAGCAGAGTTGGCCAAAG 58.386 50.000 22.47 11.77 0.00 2.77
864 892 2.030451 GCAGAGTTGGCCAAAGAGAAAG 60.030 50.000 22.47 7.88 0.00 2.62
866 894 3.885297 CAGAGTTGGCCAAAGAGAAAGAA 59.115 43.478 22.47 0.00 0.00 2.52
867 895 4.339247 CAGAGTTGGCCAAAGAGAAAGAAA 59.661 41.667 22.47 0.00 0.00 2.52
868 896 4.956075 AGAGTTGGCCAAAGAGAAAGAAAA 59.044 37.500 22.47 0.00 0.00 2.29
869 897 5.422012 AGAGTTGGCCAAAGAGAAAGAAAAA 59.578 36.000 22.47 0.00 0.00 1.94
927 963 5.423704 TGGTCATTTAGATCAACCGGTTA 57.576 39.130 21.79 9.22 33.46 2.85
941 977 3.985008 ACCGGTTATTTTGCTTTCCAAC 58.015 40.909 0.00 0.00 31.97 3.77
942 978 2.983803 CCGGTTATTTTGCTTTCCAACG 59.016 45.455 0.00 0.00 31.97 4.10
1080 1151 2.989840 GGTCAGAATGTCGAGTTCAGTG 59.010 50.000 11.72 4.17 37.40 3.66
1082 1153 4.321008 GGTCAGAATGTCGAGTTCAGTGTA 60.321 45.833 11.72 0.00 37.40 2.90
1131 1202 2.126467 GCTATTCTTCTCTGCTGCTCG 58.874 52.381 0.00 0.00 0.00 5.03
1220 1291 3.972133 TCCCTTGTTGATGCAGATTCAT 58.028 40.909 0.00 0.00 0.00 2.57
1228 1299 5.127356 TGTTGATGCAGATTCATTAATGGCA 59.873 36.000 15.36 15.50 36.79 4.92
1234 1309 4.202080 GCAGATTCATTAATGGCAGCTCAA 60.202 41.667 15.36 1.10 0.00 3.02
1733 1829 3.277211 TTCGACTTCCACGGCGAGG 62.277 63.158 17.68 17.68 34.01 4.63
1778 1877 2.303163 ACGCACCAACGCAGATTATA 57.697 45.000 0.00 0.00 36.19 0.98
1788 1887 5.279708 CCAACGCAGATTATATTCCTCTCCT 60.280 44.000 0.00 0.00 0.00 3.69
1792 1891 6.183361 ACGCAGATTATATTCCTCTCCTTGTT 60.183 38.462 0.00 0.00 0.00 2.83
1793 1892 6.367422 CGCAGATTATATTCCTCTCCTTGTTC 59.633 42.308 0.00 0.00 0.00 3.18
1794 1893 6.652900 GCAGATTATATTCCTCTCCTTGTTCC 59.347 42.308 0.00 0.00 0.00 3.62
1795 1894 7.690301 GCAGATTATATTCCTCTCCTTGTTCCA 60.690 40.741 0.00 0.00 0.00 3.53
1796 1895 8.381636 CAGATTATATTCCTCTCCTTGTTCCAT 58.618 37.037 0.00 0.00 0.00 3.41
1797 1896 9.621239 AGATTATATTCCTCTCCTTGTTCCATA 57.379 33.333 0.00 0.00 0.00 2.74
1798 1897 9.883142 GATTATATTCCTCTCCTTGTTCCATAG 57.117 37.037 0.00 0.00 0.00 2.23
1799 1898 9.621239 ATTATATTCCTCTCCTTGTTCCATAGA 57.379 33.333 0.00 0.00 0.00 1.98
1800 1899 9.621239 TTATATTCCTCTCCTTGTTCCATAGAT 57.379 33.333 0.00 0.00 0.00 1.98
1801 1900 6.838401 ATTCCTCTCCTTGTTCCATAGATT 57.162 37.500 0.00 0.00 0.00 2.40
1802 1901 7.937700 ATTCCTCTCCTTGTTCCATAGATTA 57.062 36.000 0.00 0.00 0.00 1.75
1803 1902 7.937700 TTCCTCTCCTTGTTCCATAGATTAT 57.062 36.000 0.00 0.00 0.00 1.28
1804 1903 7.937700 TCCTCTCCTTGTTCCATAGATTATT 57.062 36.000 0.00 0.00 0.00 1.40
1805 1904 8.337118 TCCTCTCCTTGTTCCATAGATTATTT 57.663 34.615 0.00 0.00 0.00 1.40
1806 1905 8.781951 TCCTCTCCTTGTTCCATAGATTATTTT 58.218 33.333 0.00 0.00 0.00 1.82
1807 1906 9.061435 CCTCTCCTTGTTCCATAGATTATTTTC 57.939 37.037 0.00 0.00 0.00 2.29
1808 1907 8.980481 TCTCCTTGTTCCATAGATTATTTTCC 57.020 34.615 0.00 0.00 0.00 3.13
1809 1908 8.781951 TCTCCTTGTTCCATAGATTATTTTCCT 58.218 33.333 0.00 0.00 0.00 3.36
1810 1909 8.980481 TCCTTGTTCCATAGATTATTTTCCTC 57.020 34.615 0.00 0.00 0.00 3.71
1811 1910 8.781951 TCCTTGTTCCATAGATTATTTTCCTCT 58.218 33.333 0.00 0.00 0.00 3.69
1812 1911 9.061435 CCTTGTTCCATAGATTATTTTCCTCTC 57.939 37.037 0.00 0.00 0.00 3.20
1813 1912 8.980481 TTGTTCCATAGATTATTTTCCTCTCC 57.020 34.615 0.00 0.00 0.00 3.71
1814 1913 8.337118 TGTTCCATAGATTATTTTCCTCTCCT 57.663 34.615 0.00 0.00 0.00 3.69
1815 1914 8.781951 TGTTCCATAGATTATTTTCCTCTCCTT 58.218 33.333 0.00 0.00 0.00 3.36
1816 1915 9.061435 GTTCCATAGATTATTTTCCTCTCCTTG 57.939 37.037 0.00 0.00 0.00 3.61
1817 1916 8.337118 TCCATAGATTATTTTCCTCTCCTTGT 57.663 34.615 0.00 0.00 0.00 3.16
1818 1917 8.781951 TCCATAGATTATTTTCCTCTCCTTGTT 58.218 33.333 0.00 0.00 0.00 2.83
1830 1929 5.424252 TCCTCTCCTTGTTCCATTAATACGT 59.576 40.000 0.00 0.00 0.00 3.57
1831 1930 6.070424 TCCTCTCCTTGTTCCATTAATACGTT 60.070 38.462 0.00 0.00 0.00 3.99
1832 1931 6.037172 CCTCTCCTTGTTCCATTAATACGTTG 59.963 42.308 0.00 0.00 0.00 4.10
1833 1932 6.469410 TCTCCTTGTTCCATTAATACGTTGT 58.531 36.000 0.00 0.00 0.00 3.32
1834 1933 6.938030 TCTCCTTGTTCCATTAATACGTTGTT 59.062 34.615 0.00 0.00 0.00 2.83
1841 1940 9.021863 TGTTCCATTAATACGTTGTTGTTTTTC 57.978 29.630 0.00 0.00 0.00 2.29
1842 1941 7.839438 TCCATTAATACGTTGTTGTTTTTCG 57.161 32.000 0.00 0.00 0.00 3.46
1843 1942 6.856938 TCCATTAATACGTTGTTGTTTTTCGG 59.143 34.615 0.00 0.00 0.00 4.30
1914 2047 2.426522 AGCTTTCATTTCACTAGCGCA 58.573 42.857 11.47 0.00 36.96 6.09
1986 2121 0.034767 AGTGCACAGCATAGCATGGT 60.035 50.000 21.04 1.62 43.44 3.55
1989 2124 1.779025 GCACAGCATAGCATGGTCGG 61.779 60.000 0.00 0.00 39.29 4.79
1992 2127 1.146930 AGCATAGCATGGTCGGTGG 59.853 57.895 0.00 0.00 35.90 4.61
2071 2227 3.578282 TGAAGACTACTGTGGCATGAAGA 59.422 43.478 0.00 0.00 0.00 2.87
2089 2245 5.361427 TGAAGAACCGACTTAATGTGAACA 58.639 37.500 0.00 0.00 0.00 3.18
2122 2279 5.245531 ACGATTTCTTCATACACACATGGT 58.754 37.500 0.00 0.00 0.00 3.55
2130 2287 8.267620 TCTTCATACACACATGGTAAATTCTG 57.732 34.615 0.00 0.00 0.00 3.02
2141 2298 5.606348 TGGTAAATTCTGGCAAACAAAGT 57.394 34.783 0.00 0.00 0.00 2.66
2142 2299 5.355596 TGGTAAATTCTGGCAAACAAAGTG 58.644 37.500 0.00 0.00 0.00 3.16
2204 2362 8.129496 TGACATATTCCCGATAGCATAAGTTA 57.871 34.615 0.00 0.00 0.00 2.24
2206 2364 8.135382 ACATATTCCCGATAGCATAAGTTACT 57.865 34.615 0.00 0.00 0.00 2.24
2239 2398 6.597672 ACGTATGTTTTATCATGCTCCTTCAA 59.402 34.615 0.00 0.00 0.00 2.69
2243 2402 5.183713 TGTTTTATCATGCTCCTTCAACTGG 59.816 40.000 0.00 0.00 0.00 4.00
2522 2684 1.270625 TGCTTACCCCAGAGTCAAACG 60.271 52.381 0.00 0.00 0.00 3.60
2620 2783 3.256383 TGCATGACCCATGACAAAGAAAG 59.744 43.478 10.77 0.00 43.81 2.62
3633 3801 4.943252 CCCGCCCCTGCATGCTAG 62.943 72.222 20.33 13.98 37.32 3.42
3676 3844 4.982241 ATCTCACTCTTGGTCTTGGAAA 57.018 40.909 0.00 0.00 0.00 3.13
3718 3886 8.498054 TTCAGCCTTAAGAAATTCAGATACTG 57.502 34.615 3.36 0.00 0.00 2.74
3807 3975 4.307032 AATGTTCCATGTCTAGTTGGCT 57.693 40.909 0.00 0.00 32.80 4.75
3808 3976 3.334583 TGTTCCATGTCTAGTTGGCTC 57.665 47.619 0.00 2.42 32.80 4.70
3811 3979 1.833630 TCCATGTCTAGTTGGCTCAGG 59.166 52.381 0.00 0.00 32.80 3.86
3925 4098 5.815222 CGGGTTTGAAAGAAAAATCTTTGGT 59.185 36.000 8.44 0.00 39.74 3.67
3991 4165 8.108551 TGTTGTCATGTCATTTATGATCAACA 57.891 30.769 19.68 19.68 43.72 3.33
4004 4178 9.965902 ATTTATGATCAACATAATACTCCCTCC 57.034 33.333 0.00 0.00 46.52 4.30
4005 4179 8.742125 TTATGATCAACATAATACTCCCTCCT 57.258 34.615 0.00 0.00 43.73 3.69
4007 4181 7.451731 TGATCAACATAATACTCCCTCCTTT 57.548 36.000 0.00 0.00 0.00 3.11
4008 4182 7.509546 TGATCAACATAATACTCCCTCCTTTC 58.490 38.462 0.00 0.00 0.00 2.62
4010 4184 6.889198 TCAACATAATACTCCCTCCTTTCTG 58.111 40.000 0.00 0.00 0.00 3.02
4011 4185 5.896073 ACATAATACTCCCTCCTTTCTGG 57.104 43.478 0.00 0.00 37.10 3.86
4012 4186 5.289510 ACATAATACTCCCTCCTTTCTGGT 58.710 41.667 0.00 0.00 37.07 4.00
4013 4187 5.731678 ACATAATACTCCCTCCTTTCTGGTT 59.268 40.000 0.00 0.00 37.07 3.67
4014 4188 6.217693 ACATAATACTCCCTCCTTTCTGGTTT 59.782 38.462 0.00 0.00 37.07 3.27
4015 4189 7.404980 ACATAATACTCCCTCCTTTCTGGTTTA 59.595 37.037 0.00 0.00 37.07 2.01
4016 4190 6.910259 AATACTCCCTCCTTTCTGGTTTAT 57.090 37.500 0.00 0.00 37.07 1.40
4017 4191 9.684702 ATAATACTCCCTCCTTTCTGGTTTATA 57.315 33.333 0.00 0.00 37.07 0.98
4018 4192 5.959583 ACTCCCTCCTTTCTGGTTTATAG 57.040 43.478 0.00 0.00 37.07 1.31
4019 4193 4.722279 ACTCCCTCCTTTCTGGTTTATAGG 59.278 45.833 0.00 0.00 37.07 2.57
4020 4194 4.045022 TCCCTCCTTTCTGGTTTATAGGG 58.955 47.826 0.00 0.00 43.08 3.53
4021 4195 3.786450 CCCTCCTTTCTGGTTTATAGGGT 59.214 47.826 0.00 0.00 39.14 4.34
4022 4196 4.229812 CCCTCCTTTCTGGTTTATAGGGTT 59.770 45.833 0.00 0.00 39.14 4.11
4023 4197 5.281558 CCCTCCTTTCTGGTTTATAGGGTTT 60.282 44.000 0.00 0.00 39.14 3.27
4024 4198 6.069264 CCCTCCTTTCTGGTTTATAGGGTTTA 60.069 42.308 0.00 0.00 39.14 2.01
4025 4199 7.367459 CCCTCCTTTCTGGTTTATAGGGTTTAT 60.367 40.741 0.00 0.00 39.14 1.40
4026 4200 8.059461 CCTCCTTTCTGGTTTATAGGGTTTATT 58.941 37.037 0.00 0.00 37.07 1.40
4027 4201 9.475620 CTCCTTTCTGGTTTATAGGGTTTATTT 57.524 33.333 0.00 0.00 37.07 1.40
4028 4202 9.470399 TCCTTTCTGGTTTATAGGGTTTATTTC 57.530 33.333 0.00 0.00 37.07 2.17
4029 4203 9.250246 CCTTTCTGGTTTATAGGGTTTATTTCA 57.750 33.333 0.00 0.00 0.00 2.69
4032 4206 9.816787 TTCTGGTTTATAGGGTTTATTTCAACT 57.183 29.630 0.00 0.00 0.00 3.16
4033 4207 9.816787 TCTGGTTTATAGGGTTTATTTCAACTT 57.183 29.630 0.00 0.00 0.00 2.66
4066 4240 9.775854 TTTTTCAATTTAAATGGCTCATCTTCA 57.224 25.926 0.39 0.00 0.00 3.02
4067 4241 9.947433 TTTTCAATTTAAATGGCTCATCTTCAT 57.053 25.926 0.39 0.00 0.00 2.57
4068 4242 9.590451 TTTCAATTTAAATGGCTCATCTTCATC 57.410 29.630 0.39 0.00 0.00 2.92
4069 4243 8.529424 TCAATTTAAATGGCTCATCTTCATCT 57.471 30.769 0.39 0.00 0.00 2.90
4070 4244 8.627403 TCAATTTAAATGGCTCATCTTCATCTC 58.373 33.333 0.39 0.00 0.00 2.75
4071 4245 8.410912 CAATTTAAATGGCTCATCTTCATCTCA 58.589 33.333 0.39 0.00 0.00 3.27
4072 4246 8.707796 ATTTAAATGGCTCATCTTCATCTCAT 57.292 30.769 0.00 0.00 0.00 2.90
4073 4247 8.529424 TTTAAATGGCTCATCTTCATCTCATT 57.471 30.769 0.00 0.00 0.00 2.57
4074 4248 8.529424 TTAAATGGCTCATCTTCATCTCATTT 57.471 30.769 0.00 0.00 37.37 2.32
4075 4249 7.419711 AAATGGCTCATCTTCATCTCATTTT 57.580 32.000 0.00 0.00 31.98 1.82
4076 4250 7.419711 AATGGCTCATCTTCATCTCATTTTT 57.580 32.000 0.00 0.00 0.00 1.94
4077 4251 8.529424 AATGGCTCATCTTCATCTCATTTTTA 57.471 30.769 0.00 0.00 0.00 1.52
4078 4252 7.563888 TGGCTCATCTTCATCTCATTTTTAG 57.436 36.000 0.00 0.00 0.00 1.85
4079 4253 7.114754 TGGCTCATCTTCATCTCATTTTTAGT 58.885 34.615 0.00 0.00 0.00 2.24
4080 4254 7.613022 TGGCTCATCTTCATCTCATTTTTAGTT 59.387 33.333 0.00 0.00 0.00 2.24
4081 4255 8.465201 GGCTCATCTTCATCTCATTTTTAGTTT 58.535 33.333 0.00 0.00 0.00 2.66
4082 4256 9.852091 GCTCATCTTCATCTCATTTTTAGTTTT 57.148 29.630 0.00 0.00 0.00 2.43
4090 4264 9.248291 TCATCTCATTTTTAGTTTTTGAAGTGC 57.752 29.630 0.00 0.00 0.00 4.40
4091 4265 9.033481 CATCTCATTTTTAGTTTTTGAAGTGCA 57.967 29.630 0.00 0.00 0.00 4.57
4092 4266 9.768662 ATCTCATTTTTAGTTTTTGAAGTGCAT 57.231 25.926 0.00 0.00 0.00 3.96
4093 4267 9.598517 TCTCATTTTTAGTTTTTGAAGTGCATT 57.401 25.926 0.00 0.00 0.00 3.56
4103 4277 9.288124 AGTTTTTGAAGTGCATTAAATTTTTGC 57.712 25.926 15.27 15.27 36.91 3.68
4104 4278 9.070149 GTTTTTGAAGTGCATTAAATTTTTGCA 57.930 25.926 19.00 19.00 43.63 4.08
4105 4279 9.798994 TTTTTGAAGTGCATTAAATTTTTGCAT 57.201 22.222 23.21 13.48 46.90 3.96
4106 4280 8.783999 TTTGAAGTGCATTAAATTTTTGCATG 57.216 26.923 23.21 11.29 46.90 4.06
4107 4281 6.372185 TGAAGTGCATTAAATTTTTGCATGC 58.628 32.000 23.21 11.82 46.90 4.06
4108 4282 5.943706 AGTGCATTAAATTTTTGCATGCA 57.056 30.435 18.46 18.46 46.90 3.96
4109 4283 6.315091 AGTGCATTAAATTTTTGCATGCAA 57.685 29.167 28.80 28.80 46.90 4.08
4110 4284 6.375377 AGTGCATTAAATTTTTGCATGCAAG 58.625 32.000 30.25 17.64 46.90 4.01
4111 4285 6.205076 AGTGCATTAAATTTTTGCATGCAAGA 59.795 30.769 30.25 24.77 46.90 3.02
4112 4286 6.856938 GTGCATTAAATTTTTGCATGCAAGAA 59.143 30.769 31.20 31.20 46.90 2.52
4113 4287 7.539366 GTGCATTAAATTTTTGCATGCAAGAAT 59.461 29.630 32.40 32.40 46.90 2.40
4114 4288 8.082852 TGCATTAAATTTTTGCATGCAAGAATT 58.917 25.926 37.18 37.18 46.00 2.17
4115 4289 9.557338 GCATTAAATTTTTGCATGCAAGAATTA 57.443 25.926 39.94 31.72 44.47 1.40
4121 4295 9.465985 AATTTTTGCATGCAAGAATTAAAAAGG 57.534 25.926 39.53 0.00 43.88 3.11
4122 4296 7.798596 TTTTGCATGCAAGAATTAAAAAGGA 57.201 28.000 30.25 10.57 37.24 3.36
4123 4297 7.798596 TTTGCATGCAAGAATTAAAAAGGAA 57.201 28.000 30.25 10.13 37.24 3.36
4124 4298 6.783892 TGCATGCAAGAATTAAAAAGGAAC 57.216 33.333 20.30 0.00 0.00 3.62
4125 4299 6.286758 TGCATGCAAGAATTAAAAAGGAACA 58.713 32.000 20.30 0.00 0.00 3.18
4126 4300 6.202570 TGCATGCAAGAATTAAAAAGGAACAC 59.797 34.615 20.30 0.00 0.00 3.32
4127 4301 6.202570 GCATGCAAGAATTAAAAAGGAACACA 59.797 34.615 14.21 0.00 0.00 3.72
4128 4302 7.566709 CATGCAAGAATTAAAAAGGAACACAC 58.433 34.615 0.00 0.00 0.00 3.82
4129 4303 6.872920 TGCAAGAATTAAAAAGGAACACACT 58.127 32.000 0.00 0.00 0.00 3.55
4130 4304 8.001881 TGCAAGAATTAAAAAGGAACACACTA 57.998 30.769 0.00 0.00 0.00 2.74
4131 4305 8.470805 TGCAAGAATTAAAAAGGAACACACTAA 58.529 29.630 0.00 0.00 0.00 2.24
4132 4306 9.476202 GCAAGAATTAAAAAGGAACACACTAAT 57.524 29.630 0.00 0.00 0.00 1.73
4134 4308 9.476202 AAGAATTAAAAAGGAACACACTAATGC 57.524 29.630 0.00 0.00 0.00 3.56
4135 4309 8.637986 AGAATTAAAAAGGAACACACTAATGCA 58.362 29.630 0.00 0.00 0.00 3.96
4136 4310 9.423061 GAATTAAAAAGGAACACACTAATGCAT 57.577 29.630 0.00 0.00 0.00 3.96
4137 4311 8.761575 ATTAAAAAGGAACACACTAATGCATG 57.238 30.769 0.00 0.00 0.00 4.06
4138 4312 5.789643 AAAAGGAACACACTAATGCATGT 57.210 34.783 0.00 0.00 0.00 3.21
4139 4313 6.892658 AAAAGGAACACACTAATGCATGTA 57.107 33.333 0.00 0.00 0.00 2.29
4140 4314 6.892658 AAAGGAACACACTAATGCATGTAA 57.107 33.333 0.00 0.00 0.00 2.41
4141 4315 7.466746 AAAGGAACACACTAATGCATGTAAT 57.533 32.000 0.00 0.00 0.00 1.89
4160 4334 9.254133 CATGTAATGTTTCTACTCATCTAGTGG 57.746 37.037 0.00 0.00 40.20 4.00
4161 4335 7.265673 TGTAATGTTTCTACTCATCTAGTGGC 58.734 38.462 0.00 0.00 39.39 5.01
4162 4336 4.737855 TGTTTCTACTCATCTAGTGGCC 57.262 45.455 0.00 0.00 39.39 5.36
4163 4337 4.093743 TGTTTCTACTCATCTAGTGGCCA 58.906 43.478 0.00 0.00 39.39 5.36
4164 4338 4.530553 TGTTTCTACTCATCTAGTGGCCAA 59.469 41.667 7.24 0.00 39.39 4.52
4165 4339 5.112686 GTTTCTACTCATCTAGTGGCCAAG 58.887 45.833 7.24 1.33 39.39 3.61
4166 4340 2.695666 TCTACTCATCTAGTGGCCAAGC 59.304 50.000 7.24 0.00 39.39 4.01
4167 4341 1.279496 ACTCATCTAGTGGCCAAGCA 58.721 50.000 7.24 0.00 36.93 3.91
4168 4342 1.842562 ACTCATCTAGTGGCCAAGCAT 59.157 47.619 7.24 0.00 36.93 3.79
4169 4343 2.219458 CTCATCTAGTGGCCAAGCATG 58.781 52.381 7.24 7.98 0.00 4.06
4170 4344 0.666913 CATCTAGTGGCCAAGCATGC 59.333 55.000 7.24 10.51 0.00 4.06
4171 4345 0.256752 ATCTAGTGGCCAAGCATGCA 59.743 50.000 21.98 0.00 0.00 3.96
4172 4346 0.256752 TCTAGTGGCCAAGCATGCAT 59.743 50.000 21.98 4.57 0.00 3.96
4173 4347 0.384309 CTAGTGGCCAAGCATGCATG 59.616 55.000 22.70 22.70 0.00 4.06
4198 4372 8.655092 TGCACTGCAATTAACTTAAATTAATGC 58.345 29.630 0.00 8.92 35.42 3.56
4199 4373 8.655092 GCACTGCAATTAACTTAAATTAATGCA 58.345 29.630 17.40 17.40 36.86 3.96
4215 4389 9.715121 AAATTAATGCATGAGTTGAATTTGAGT 57.285 25.926 0.00 0.00 35.12 3.41
4218 4392 7.458409 AATGCATGAGTTGAATTTGAGTAGT 57.542 32.000 0.00 0.00 28.14 2.73
4219 4393 6.882610 TGCATGAGTTGAATTTGAGTAGTT 57.117 33.333 0.00 0.00 0.00 2.24
4220 4394 7.275888 TGCATGAGTTGAATTTGAGTAGTTT 57.724 32.000 0.00 0.00 0.00 2.66
4221 4395 7.715657 TGCATGAGTTGAATTTGAGTAGTTTT 58.284 30.769 0.00 0.00 0.00 2.43
4222 4396 7.648908 TGCATGAGTTGAATTTGAGTAGTTTTG 59.351 33.333 0.00 0.00 0.00 2.44
4223 4397 7.649306 GCATGAGTTGAATTTGAGTAGTTTTGT 59.351 33.333 0.00 0.00 0.00 2.83
4226 4400 9.391006 TGAGTTGAATTTGAGTAGTTTTGTAGT 57.609 29.630 0.00 0.00 0.00 2.73
4253 4427 7.862274 AATATGAGATACATTCCTCCACTCA 57.138 36.000 0.00 0.00 40.07 3.41
4254 4428 5.543507 ATGAGATACATTCCTCCACTCAC 57.456 43.478 0.00 0.00 35.45 3.51
4255 4429 4.352893 TGAGATACATTCCTCCACTCACA 58.647 43.478 0.00 0.00 0.00 3.58
4256 4430 4.777366 TGAGATACATTCCTCCACTCACAA 59.223 41.667 0.00 0.00 0.00 3.33
4257 4431 5.248248 TGAGATACATTCCTCCACTCACAAA 59.752 40.000 0.00 0.00 0.00 2.83
4258 4432 6.126863 AGATACATTCCTCCACTCACAAAA 57.873 37.500 0.00 0.00 0.00 2.44
4259 4433 6.725364 AGATACATTCCTCCACTCACAAAAT 58.275 36.000 0.00 0.00 0.00 1.82
4260 4434 7.861629 AGATACATTCCTCCACTCACAAAATA 58.138 34.615 0.00 0.00 0.00 1.40
4261 4435 8.497745 AGATACATTCCTCCACTCACAAAATAT 58.502 33.333 0.00 0.00 0.00 1.28
4262 4436 8.682936 ATACATTCCTCCACTCACAAAATATC 57.317 34.615 0.00 0.00 0.00 1.63
4263 4437 6.725364 ACATTCCTCCACTCACAAAATATCT 58.275 36.000 0.00 0.00 0.00 1.98
4264 4438 7.177878 ACATTCCTCCACTCACAAAATATCTT 58.822 34.615 0.00 0.00 0.00 2.40
4265 4439 7.121759 ACATTCCTCCACTCACAAAATATCTTG 59.878 37.037 0.00 0.00 0.00 3.02
4266 4440 5.500234 TCCTCCACTCACAAAATATCTTGG 58.500 41.667 0.00 0.00 0.00 3.61
4267 4441 5.014123 TCCTCCACTCACAAAATATCTTGGT 59.986 40.000 0.00 0.00 0.00 3.67
4268 4442 5.711976 CCTCCACTCACAAAATATCTTGGTT 59.288 40.000 0.00 0.00 0.00 3.67
4269 4443 6.349611 CCTCCACTCACAAAATATCTTGGTTG 60.350 42.308 0.00 0.00 0.00 3.77
4270 4444 6.303054 TCCACTCACAAAATATCTTGGTTGA 58.697 36.000 0.00 0.00 0.00 3.18
4271 4445 6.947733 TCCACTCACAAAATATCTTGGTTGAT 59.052 34.615 0.00 0.00 0.00 2.57
4272 4446 7.031372 CCACTCACAAAATATCTTGGTTGATG 58.969 38.462 0.00 0.00 0.00 3.07
4273 4447 7.094248 CCACTCACAAAATATCTTGGTTGATGA 60.094 37.037 0.00 0.00 0.00 2.92
4274 4448 7.966753 CACTCACAAAATATCTTGGTTGATGAG 59.033 37.037 5.30 5.30 36.41 2.90
4275 4449 7.884877 ACTCACAAAATATCTTGGTTGATGAGA 59.115 33.333 11.33 0.00 35.30 3.27
4276 4450 8.812513 TCACAAAATATCTTGGTTGATGAGAT 57.187 30.769 0.00 0.00 34.67 2.75
4277 4451 9.246670 TCACAAAATATCTTGGTTGATGAGATT 57.753 29.630 0.00 0.00 32.68 2.40
4278 4452 9.865321 CACAAAATATCTTGGTTGATGAGATTT 57.135 29.630 0.00 0.00 33.37 2.17
4287 4461 9.519191 TCTTGGTTGATGAGATTTAAGATTTGA 57.481 29.630 0.00 0.00 0.00 2.69
4289 4463 9.912634 TTGGTTGATGAGATTTAAGATTTGAAC 57.087 29.630 0.00 0.00 0.00 3.18
4290 4464 8.522830 TGGTTGATGAGATTTAAGATTTGAACC 58.477 33.333 0.00 0.00 0.00 3.62
4291 4465 7.976175 GGTTGATGAGATTTAAGATTTGAACCC 59.024 37.037 0.00 0.00 0.00 4.11
4292 4466 8.743714 GTTGATGAGATTTAAGATTTGAACCCT 58.256 33.333 0.00 0.00 0.00 4.34
4293 4467 9.973661 TTGATGAGATTTAAGATTTGAACCCTA 57.026 29.630 0.00 0.00 0.00 3.53
4300 4474 9.946165 GATTTAAGATTTGAACCCTATAAACCG 57.054 33.333 0.00 0.00 0.00 4.44
4301 4475 9.689501 ATTTAAGATTTGAACCCTATAAACCGA 57.310 29.630 0.00 0.00 0.00 4.69
4302 4476 9.517868 TTTAAGATTTGAACCCTATAAACCGAA 57.482 29.630 0.00 0.00 0.00 4.30
4303 4477 9.517868 TTAAGATTTGAACCCTATAAACCGAAA 57.482 29.630 0.00 0.00 0.00 3.46
4304 4478 8.411991 AAGATTTGAACCCTATAAACCGAAAA 57.588 30.769 0.00 0.00 0.00 2.29
4305 4479 8.051901 AGATTTGAACCCTATAAACCGAAAAG 57.948 34.615 0.00 0.00 0.00 2.27
4307 4481 5.502089 TGAACCCTATAAACCGAAAAGGA 57.498 39.130 0.00 0.00 45.00 3.36
4308 4482 5.493809 TGAACCCTATAAACCGAAAAGGAG 58.506 41.667 0.00 0.00 45.00 3.69
4309 4483 4.498894 ACCCTATAAACCGAAAAGGAGG 57.501 45.455 0.00 0.00 45.00 4.30
4310 4484 3.816994 CCCTATAAACCGAAAAGGAGGG 58.183 50.000 0.00 0.00 45.00 4.30
4311 4485 3.457012 CCCTATAAACCGAAAAGGAGGGA 59.543 47.826 0.00 0.00 46.86 4.20
4312 4486 4.444449 CCCTATAAACCGAAAAGGAGGGAG 60.444 50.000 0.00 0.00 46.86 4.30
4313 4487 4.163649 CCTATAAACCGAAAAGGAGGGAGT 59.836 45.833 0.00 0.00 45.00 3.85
4314 4488 5.364735 CCTATAAACCGAAAAGGAGGGAGTA 59.635 44.000 0.00 0.00 45.00 2.59
4327 4501 3.432890 GGAGGGAGTAGCATTCAAGAAGG 60.433 52.174 0.00 0.00 0.00 3.46
4329 4503 2.239907 GGGAGTAGCATTCAAGAAGGGT 59.760 50.000 4.57 4.57 36.72 4.34
4342 4516 1.587043 GAAGGGTTCCCTGAAAGCGC 61.587 60.000 11.50 0.00 36.42 5.92
4365 4539 4.982295 CGAGTCCGTAATTGCATAGATTCA 59.018 41.667 0.00 0.00 0.00 2.57
4464 4642 2.356913 CGTGTGTGGCCGACATGA 60.357 61.111 18.10 4.18 36.78 3.07
4483 4662 7.088589 ACATGAAACAATAGGCTAACATGTC 57.911 36.000 0.00 7.50 41.66 3.06
4489 4668 5.914033 ACAATAGGCTAACATGTCGTACAT 58.086 37.500 0.00 0.00 39.91 2.29
4501 4680 5.294306 ACATGTCGTACATCATGCCTAAAAG 59.706 40.000 20.14 2.94 43.34 2.27
4580 4760 3.273434 TCAGCTGTTCAATATGTGGAGC 58.727 45.455 14.67 0.00 0.00 4.70
4683 4863 7.682890 AGGAAGAGCTAGATAGATAGTACTCCT 59.317 40.741 0.00 0.33 0.00 3.69
4684 4864 8.984855 GGAAGAGCTAGATAGATAGTACTCCTA 58.015 40.741 0.00 2.89 0.00 2.94
4797 5141 4.641645 CCGGTGCAGCTCCCAACA 62.642 66.667 14.92 0.00 0.00 3.33
4991 5448 2.711922 CGCTGACGCCTCCTACCTT 61.712 63.158 0.00 0.00 0.00 3.50
5066 5523 1.300620 CGTCACTTTCGACCAGCCA 60.301 57.895 0.00 0.00 31.91 4.75
5069 5526 1.227823 CACTTTCGACCAGCCACCA 60.228 57.895 0.00 0.00 0.00 4.17
5157 5614 0.172578 CACCGCCATCTTCGACTACA 59.827 55.000 0.00 0.00 0.00 2.74
5162 5619 0.179137 CCATCTTCGACTACAGCGCA 60.179 55.000 11.47 0.00 0.00 6.09
5432 5919 1.135094 CCATCCTCCAGGCACACTAT 58.865 55.000 0.00 0.00 34.44 2.12
5507 5994 0.318360 CGGTGCAGTTCGACTACACA 60.318 55.000 15.57 1.40 42.77 3.72
5720 6207 0.738389 ACACCGCAAAGTTCAACCTG 59.262 50.000 0.00 0.00 0.00 4.00
5890 6377 0.313672 GATGGAGTAGGAGAGCTGCG 59.686 60.000 0.00 0.00 0.00 5.18
5943 6430 6.017687 GCCAATTTGCTGAAGAAATCAAAGTT 60.018 34.615 0.00 0.00 37.67 2.66
5944 6431 7.349711 CCAATTTGCTGAAGAAATCAAAGTTG 58.650 34.615 0.00 0.00 37.67 3.16
5945 6432 7.011669 CCAATTTGCTGAAGAAATCAAAGTTGT 59.988 33.333 0.00 0.00 37.67 3.32
5946 6433 8.392612 CAATTTGCTGAAGAAATCAAAGTTGTT 58.607 29.630 0.00 0.00 37.67 2.83
5947 6434 6.890663 TTGCTGAAGAAATCAAAGTTGTTG 57.109 33.333 0.00 0.00 37.67 3.33
5948 6435 5.964758 TGCTGAAGAAATCAAAGTTGTTGT 58.035 33.333 0.00 0.00 37.67 3.32
5949 6436 6.397272 TGCTGAAGAAATCAAAGTTGTTGTT 58.603 32.000 0.00 0.00 37.67 2.83
5950 6437 6.873076 TGCTGAAGAAATCAAAGTTGTTGTTT 59.127 30.769 0.00 0.00 37.67 2.83
5951 6438 7.387397 TGCTGAAGAAATCAAAGTTGTTGTTTT 59.613 29.630 0.00 0.00 37.67 2.43
6035 6522 5.352016 TGCCGCGTTCTAGTTATTTACATTT 59.648 36.000 4.92 0.00 0.00 2.32
6152 8148 2.104281 TCCTGCATCATGAGATCCAGTG 59.896 50.000 0.09 0.00 38.19 3.66
6177 8173 8.812972 TGGTACACTGAAATCAATCTTAGTAGT 58.187 33.333 0.00 0.00 0.00 2.73
6180 8176 7.390027 ACACTGAAATCAATCTTAGTAGTGCT 58.610 34.615 0.00 0.00 37.19 4.40
6247 8488 1.348064 AGGAGAAATGGTGTCGGTCA 58.652 50.000 0.00 0.00 0.00 4.02
6270 8511 4.226168 AGCAAAAAGATCTACCTGGCTACT 59.774 41.667 0.00 0.00 0.00 2.57
6271 8512 5.425539 AGCAAAAAGATCTACCTGGCTACTA 59.574 40.000 0.00 0.00 0.00 1.82
6272 8513 5.755861 GCAAAAAGATCTACCTGGCTACTAG 59.244 44.000 0.00 0.00 0.00 2.57
6359 8600 1.672356 ACAGGGCACGACTGCATTC 60.672 57.895 0.11 0.00 46.28 2.67
6387 8628 1.673665 CCAGGCTCCACAGACTTGC 60.674 63.158 0.00 0.00 34.70 4.01
6663 8906 4.410228 CCATCAAGAAAGATACTCCCTCCA 59.590 45.833 0.00 0.00 0.00 3.86
6767 9010 8.553696 GTCAAGAAAGAAATTTGCATCACAATT 58.446 29.630 0.00 0.00 38.31 2.32
6783 9026 5.886609 TCACAATTTTCCTAGTTCCCATCA 58.113 37.500 0.00 0.00 0.00 3.07
6888 9131 4.437820 GTCTTGCGTTTCATGTTCTTTGAC 59.562 41.667 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.890629 ACATCAGCAAATACTTAGTGATCTAAA 57.109 29.630 0.00 0.00 35.98 1.85
16 17 9.317936 CACATCAGCAAATACTTAGTGATCTAA 57.682 33.333 0.00 0.00 35.25 2.10
17 18 7.439356 GCACATCAGCAAATACTTAGTGATCTA 59.561 37.037 0.00 0.00 0.00 1.98
18 19 6.259608 GCACATCAGCAAATACTTAGTGATCT 59.740 38.462 0.00 0.00 0.00 2.75
19 20 6.037500 TGCACATCAGCAAATACTTAGTGATC 59.962 38.462 0.00 0.00 42.46 2.92
20 21 5.882000 TGCACATCAGCAAATACTTAGTGAT 59.118 36.000 0.00 0.00 42.46 3.06
21 22 5.244755 TGCACATCAGCAAATACTTAGTGA 58.755 37.500 0.00 0.00 42.46 3.41
22 23 5.550232 TGCACATCAGCAAATACTTAGTG 57.450 39.130 0.00 0.00 42.46 2.74
54 55 6.993308 TGCTTGTACTACTTGACCAAATAACA 59.007 34.615 0.00 0.00 0.00 2.41
55 56 7.429636 TGCTTGTACTACTTGACCAAATAAC 57.570 36.000 0.00 0.00 0.00 1.89
56 57 7.499563 TGTTGCTTGTACTACTTGACCAAATAA 59.500 33.333 0.00 0.00 0.00 1.40
58 59 5.825679 TGTTGCTTGTACTACTTGACCAAAT 59.174 36.000 0.00 0.00 0.00 2.32
61 62 4.100344 TCTGTTGCTTGTACTACTTGACCA 59.900 41.667 0.00 0.00 0.00 4.02
62 63 4.628074 TCTGTTGCTTGTACTACTTGACC 58.372 43.478 0.00 0.00 0.00 4.02
63 64 5.983720 TCTTCTGTTGCTTGTACTACTTGAC 59.016 40.000 0.00 0.00 0.00 3.18
65 66 6.701841 TCTTCTTCTGTTGCTTGTACTACTTG 59.298 38.462 0.00 0.00 0.00 3.16
85 88 8.200792 GTCAAATGTACATCTAGATGGTCTTCT 58.799 37.037 31.19 15.19 42.91 2.85
105 108 5.305128 ACCATTGTCATTTGTGAGGTCAAAT 59.695 36.000 0.00 0.00 45.23 2.32
106 109 4.648762 ACCATTGTCATTTGTGAGGTCAAA 59.351 37.500 0.00 0.00 40.74 2.69
107 110 4.214310 ACCATTGTCATTTGTGAGGTCAA 58.786 39.130 0.00 0.00 0.00 3.18
109 112 3.820467 TGACCATTGTCATTTGTGAGGTC 59.180 43.478 0.00 0.00 46.40 3.85
110 113 3.831323 TGACCATTGTCATTTGTGAGGT 58.169 40.909 0.00 0.00 46.40 3.85
122 131 9.077885 ACTGTAAATTCATAACTTGACCATTGT 57.922 29.630 0.00 0.00 32.84 2.71
144 153 6.239204 GGTGCCTTAAAGTTTTTGGATACTGT 60.239 38.462 9.81 0.00 37.61 3.55
158 167 2.035632 TGTTGGGTTGGTGCCTTAAAG 58.964 47.619 0.00 0.00 0.00 1.85
161 170 1.063567 AGTTGTTGGGTTGGTGCCTTA 60.064 47.619 0.00 0.00 0.00 2.69
162 171 0.325203 AGTTGTTGGGTTGGTGCCTT 60.325 50.000 0.00 0.00 0.00 4.35
169 178 0.754957 TGGCAGGAGTTGTTGGGTTG 60.755 55.000 0.00 0.00 0.00 3.77
236 253 4.990257 TGGCGTAACTAGCTAACTAACTG 58.010 43.478 0.00 0.00 34.52 3.16
254 271 3.635433 CATCCATGCTTTTCTGGCG 57.365 52.632 0.00 0.00 32.30 5.69
455 473 2.223782 ACGTCGCCACTAGTAAACAACA 60.224 45.455 0.00 0.00 0.00 3.33
462 480 3.557185 CACATAGTACGTCGCCACTAGTA 59.443 47.826 11.57 0.00 31.10 1.82
464 482 2.286831 CCACATAGTACGTCGCCACTAG 60.287 54.545 11.57 0.00 31.10 2.57
469 487 0.030369 CTCCCACATAGTACGTCGCC 59.970 60.000 0.00 0.00 0.00 5.54
497 515 1.536662 AGTCCCACACTCCCACTCC 60.537 63.158 0.00 0.00 0.00 3.85
498 516 1.674057 CAGTCCCACACTCCCACTC 59.326 63.158 0.00 0.00 30.26 3.51
499 517 1.843376 CCAGTCCCACACTCCCACT 60.843 63.158 0.00 0.00 30.26 4.00
500 518 2.147387 ACCAGTCCCACACTCCCAC 61.147 63.158 0.00 0.00 30.26 4.61
501 519 2.146724 CACCAGTCCCACACTCCCA 61.147 63.158 0.00 0.00 30.26 4.37
502 520 2.750350 CACCAGTCCCACACTCCC 59.250 66.667 0.00 0.00 30.26 4.30
503 521 2.750350 CCACCAGTCCCACACTCC 59.250 66.667 0.00 0.00 30.26 3.85
504 522 2.032681 GCCACCAGTCCCACACTC 59.967 66.667 0.00 0.00 30.26 3.51
505 523 2.448542 AGCCACCAGTCCCACACT 60.449 61.111 0.00 0.00 34.67 3.55
506 524 2.032681 GAGCCACCAGTCCCACAC 59.967 66.667 0.00 0.00 0.00 3.82
507 525 3.249189 GGAGCCACCAGTCCCACA 61.249 66.667 0.00 0.00 38.79 4.17
508 526 3.249189 TGGAGCCACCAGTCCCAC 61.249 66.667 0.00 0.00 44.64 4.61
596 614 0.457851 CGGTTGTGAGCTAGAGGAGG 59.542 60.000 0.00 0.00 0.00 4.30
597 615 0.179124 GCGGTTGTGAGCTAGAGGAG 60.179 60.000 0.00 0.00 0.00 3.69
598 616 1.605058 GGCGGTTGTGAGCTAGAGGA 61.605 60.000 0.00 0.00 0.00 3.71
668 696 1.142748 AGCTAGCGATGAGTGCCAC 59.857 57.895 9.55 0.00 0.00 5.01
718 746 5.011090 TCAAGGATGATGAAACCTACTCG 57.989 43.478 0.00 0.00 33.34 4.18
738 766 4.431416 TCACAAGTTAAGCCTTTCCTCA 57.569 40.909 0.00 0.00 0.00 3.86
739 767 4.156739 CCATCACAAGTTAAGCCTTTCCTC 59.843 45.833 0.00 0.00 0.00 3.71
740 768 4.082125 CCATCACAAGTTAAGCCTTTCCT 58.918 43.478 0.00 0.00 0.00 3.36
868 896 9.946165 GCTCAAACAAACAGTACTAGTAATTTT 57.054 29.630 3.61 0.00 0.00 1.82
869 897 9.116067 TGCTCAAACAAACAGTACTAGTAATTT 57.884 29.630 3.61 3.46 0.00 1.82
870 898 8.671384 TGCTCAAACAAACAGTACTAGTAATT 57.329 30.769 3.61 0.00 0.00 1.40
871 899 8.671384 TTGCTCAAACAAACAGTACTAGTAAT 57.329 30.769 3.61 0.00 0.00 1.89
872 900 8.671384 ATTGCTCAAACAAACAGTACTAGTAA 57.329 30.769 3.61 0.00 32.27 2.24
873 901 8.671384 AATTGCTCAAACAAACAGTACTAGTA 57.329 30.769 0.00 0.00 32.27 1.82
874 902 7.568199 AATTGCTCAAACAAACAGTACTAGT 57.432 32.000 0.00 0.00 32.27 2.57
875 903 8.856490 AAAATTGCTCAAACAAACAGTACTAG 57.144 30.769 0.00 0.00 32.27 2.57
877 905 9.083080 GTTAAAATTGCTCAAACAAACAGTACT 57.917 29.630 0.00 0.00 32.27 2.73
878 906 8.865001 TGTTAAAATTGCTCAAACAAACAGTAC 58.135 29.630 0.00 0.00 32.27 2.73
884 912 7.550551 TGACCATGTTAAAATTGCTCAAACAAA 59.449 29.630 0.00 0.00 34.08 2.83
886 914 6.577103 TGACCATGTTAAAATTGCTCAAACA 58.423 32.000 0.00 0.00 34.81 2.83
927 963 2.209273 GTTGGCGTTGGAAAGCAAAAT 58.791 42.857 0.00 0.00 34.54 1.82
941 977 0.738389 ACTTGTTTCTGTGGTTGGCG 59.262 50.000 0.00 0.00 0.00 5.69
942 978 1.202405 CCACTTGTTTCTGTGGTTGGC 60.202 52.381 4.18 0.00 46.18 4.52
1037 1108 2.686835 ACTGCTCTGCTCCCTCCC 60.687 66.667 0.00 0.00 0.00 4.30
1065 1136 3.056749 GGGAGTACACTGAACTCGACATT 60.057 47.826 0.00 0.00 43.55 2.71
1080 1151 0.173708 CAAGGAGCGACAGGGAGTAC 59.826 60.000 0.00 0.00 0.00 2.73
1082 1153 2.286523 CCAAGGAGCGACAGGGAGT 61.287 63.158 0.00 0.00 0.00 3.85
1220 1291 5.981088 TCAGAATTTTGAGCTGCCATTAA 57.019 34.783 0.00 0.00 0.00 1.40
1228 1299 4.401519 CACCATCCATCAGAATTTTGAGCT 59.598 41.667 4.85 0.00 0.00 4.09
1234 1309 4.221262 CACCAACACCATCCATCAGAATTT 59.779 41.667 0.00 0.00 0.00 1.82
1464 1544 4.707934 TCCATTAGCATGCAATATCATGGG 59.292 41.667 21.98 12.67 42.97 4.00
1465 1545 5.891451 CTCCATTAGCATGCAATATCATGG 58.109 41.667 21.98 18.94 42.97 3.66
1733 1829 2.592861 GAGCATGATGGGGGCGAC 60.593 66.667 0.00 0.00 0.00 5.19
1765 1864 5.788450 AGGAGAGGAATATAATCTGCGTTG 58.212 41.667 0.00 0.00 36.61 4.10
1766 1865 6.183361 ACAAGGAGAGGAATATAATCTGCGTT 60.183 38.462 0.00 0.00 36.61 4.84
1792 1891 8.337118 ACAAGGAGAGGAAAATAATCTATGGA 57.663 34.615 0.00 0.00 0.00 3.41
1793 1892 8.986929 AACAAGGAGAGGAAAATAATCTATGG 57.013 34.615 0.00 0.00 0.00 2.74
1794 1893 9.061435 GGAACAAGGAGAGGAAAATAATCTATG 57.939 37.037 0.00 0.00 0.00 2.23
1795 1894 8.781951 TGGAACAAGGAGAGGAAAATAATCTAT 58.218 33.333 0.00 0.00 31.92 1.98
1796 1895 8.158025 TGGAACAAGGAGAGGAAAATAATCTA 57.842 34.615 0.00 0.00 31.92 1.98
1797 1896 7.032598 TGGAACAAGGAGAGGAAAATAATCT 57.967 36.000 0.00 0.00 31.92 2.40
1816 1915 8.202697 CGAAAAACAACAACGTATTAATGGAAC 58.797 33.333 0.00 0.00 0.00 3.62
1817 1916 7.378995 CCGAAAAACAACAACGTATTAATGGAA 59.621 33.333 0.00 0.00 0.00 3.53
1818 1917 6.856938 CCGAAAAACAACAACGTATTAATGGA 59.143 34.615 0.00 0.00 0.00 3.41
1830 1929 2.349297 ACGCAACCGAAAAACAACAA 57.651 40.000 0.00 0.00 38.29 2.83
1831 1930 1.986378 CAACGCAACCGAAAAACAACA 59.014 42.857 0.00 0.00 38.29 3.33
1832 1931 1.987074 ACAACGCAACCGAAAAACAAC 59.013 42.857 0.00 0.00 38.29 3.32
1833 1932 2.349297 ACAACGCAACCGAAAAACAA 57.651 40.000 0.00 0.00 38.29 2.83
1834 1933 1.986378 CAACAACGCAACCGAAAAACA 59.014 42.857 0.00 0.00 38.29 2.83
1841 1940 0.028242 TAAGTGCAACAACGCAACCG 59.972 50.000 0.00 0.00 45.14 4.44
1842 1941 1.849829 GTTAAGTGCAACAACGCAACC 59.150 47.619 0.00 0.00 45.14 3.77
1843 1942 2.520979 TGTTAAGTGCAACAACGCAAC 58.479 42.857 0.00 0.00 45.14 4.17
1870 1969 1.330521 CCCTTCGTTTCATATGGTGCG 59.669 52.381 2.13 5.27 0.00 5.34
1989 2124 1.136336 GTCAAACGCAGAATCGACCAC 60.136 52.381 0.00 0.00 0.00 4.16
1992 2127 3.545308 CGTCAAACGCAGAATCGAC 57.455 52.632 0.00 0.00 33.65 4.20
2023 2158 1.425412 AGAATACGACACACGCCAAC 58.575 50.000 0.00 0.00 46.94 3.77
2099 2256 5.245531 ACCATGTGTGTATGAAGAAATCGT 58.754 37.500 0.00 0.00 0.00 3.73
2141 2298 8.029522 TGAACACAATAACTTTTGCAGTAAACA 58.970 29.630 0.00 0.00 32.94 2.83
2142 2299 8.318167 GTGAACACAATAACTTTTGCAGTAAAC 58.682 33.333 0.00 0.00 32.94 2.01
2158 2316 6.096705 TGTCAATTCCTTCAAGTGAACACAAT 59.903 34.615 7.68 0.00 40.68 2.71
2195 2353 8.866956 ACATACGTTCTTTACAGTAACTTATGC 58.133 33.333 0.00 0.00 38.17 3.14
2206 2364 8.941977 AGCATGATAAAACATACGTTCTTTACA 58.058 29.630 0.00 0.00 32.91 2.41
2239 2398 1.084370 GCTATTCAGCGAACGCCAGT 61.084 55.000 15.44 2.73 43.17 4.00
2261 2420 3.691609 CACTGCCTATTTCAAGAAGGGTC 59.308 47.826 0.00 0.00 0.00 4.46
2264 2423 4.201990 GCATCACTGCCTATTTCAAGAAGG 60.202 45.833 0.00 0.00 42.88 3.46
2473 2635 2.353803 CCAACAACCAACCAACCGAAAA 60.354 45.455 0.00 0.00 0.00 2.29
2551 2713 6.854892 AGACCGACGTGATAGTATAAATTTCG 59.145 38.462 0.00 0.00 0.00 3.46
2626 2789 0.106167 TGCTCCGTGGTAGCTATCCT 60.106 55.000 0.44 0.00 40.73 3.24
2639 2805 1.089112 TGCACAATGATCTTGCTCCG 58.911 50.000 9.53 0.00 37.16 4.63
2666 2832 7.548097 TGAGTAAAGAAGGATCTCACATACAC 58.452 38.462 0.00 0.00 33.77 2.90
3627 3795 3.209410 GCACATGTTTCCTAGCTAGCAT 58.791 45.455 18.83 10.16 0.00 3.79
3628 3796 2.027285 TGCACATGTTTCCTAGCTAGCA 60.027 45.455 18.83 8.18 0.00 3.49
3629 3797 2.632377 TGCACATGTTTCCTAGCTAGC 58.368 47.619 15.74 6.62 0.00 3.42
3632 3800 8.766476 AGATATATATGCACATGTTTCCTAGCT 58.234 33.333 0.00 0.00 0.00 3.32
3633 3801 8.954950 AGATATATATGCACATGTTTCCTAGC 57.045 34.615 0.00 0.00 0.00 3.42
3683 3851 4.569943 TCTTAAGGCTGAAGCAAGTAGTG 58.430 43.478 6.75 0.00 44.36 2.74
3684 3852 4.891992 TCTTAAGGCTGAAGCAAGTAGT 57.108 40.909 6.75 0.00 44.36 2.73
3685 3853 6.749923 ATTTCTTAAGGCTGAAGCAAGTAG 57.250 37.500 6.75 0.00 44.36 2.57
3718 3886 2.700722 AAGCTAGCTAGAAAGGTGCC 57.299 50.000 25.15 3.82 34.60 5.01
3766 3934 6.754193 ACATTTTCATGATGATGCATGCATA 58.246 32.000 32.27 17.85 44.08 3.14
3807 3975 8.262601 TGAGGAAATAATGTATAAGAGCCTGA 57.737 34.615 0.00 0.00 0.00 3.86
3808 3976 8.908786 TTGAGGAAATAATGTATAAGAGCCTG 57.091 34.615 0.00 0.00 0.00 4.85
3984 4157 7.659390 CAGAAAGGAGGGAGTATTATGTTGATC 59.341 40.741 0.00 0.00 0.00 2.92
3985 4158 7.420680 CCAGAAAGGAGGGAGTATTATGTTGAT 60.421 40.741 0.00 0.00 41.22 2.57
3991 4165 6.910259 AAACCAGAAAGGAGGGAGTATTAT 57.090 37.500 0.00 0.00 41.22 1.28
3997 4171 4.103311 CCCTATAAACCAGAAAGGAGGGAG 59.897 50.000 0.00 0.00 45.41 4.30
3998 4172 4.045022 CCCTATAAACCAGAAAGGAGGGA 58.955 47.826 0.00 0.00 45.41 4.20
4000 4174 5.452341 AACCCTATAAACCAGAAAGGAGG 57.548 43.478 0.00 0.00 41.22 4.30
4001 4175 9.475620 AAATAAACCCTATAAACCAGAAAGGAG 57.524 33.333 0.00 0.00 41.22 3.69
4002 4176 9.470399 GAAATAAACCCTATAAACCAGAAAGGA 57.530 33.333 0.00 0.00 41.22 3.36
4003 4177 9.250246 TGAAATAAACCCTATAAACCAGAAAGG 57.750 33.333 0.00 0.00 45.67 3.11
4007 4181 9.816787 AAGTTGAAATAAACCCTATAAACCAGA 57.183 29.630 0.00 0.00 0.00 3.86
4040 4214 9.775854 TGAAGATGAGCCATTTAAATTGAAAAA 57.224 25.926 3.53 0.00 0.00 1.94
4041 4215 9.947433 ATGAAGATGAGCCATTTAAATTGAAAA 57.053 25.926 3.53 0.00 0.00 2.29
4042 4216 9.590451 GATGAAGATGAGCCATTTAAATTGAAA 57.410 29.630 3.53 0.00 0.00 2.69
4043 4217 8.974238 AGATGAAGATGAGCCATTTAAATTGAA 58.026 29.630 3.53 0.00 0.00 2.69
4044 4218 8.529424 AGATGAAGATGAGCCATTTAAATTGA 57.471 30.769 3.53 0.00 0.00 2.57
4045 4219 8.410912 TGAGATGAAGATGAGCCATTTAAATTG 58.589 33.333 0.00 0.00 0.00 2.32
4046 4220 8.529424 TGAGATGAAGATGAGCCATTTAAATT 57.471 30.769 0.00 0.00 0.00 1.82
4047 4221 8.707796 ATGAGATGAAGATGAGCCATTTAAAT 57.292 30.769 0.00 0.00 0.00 1.40
4048 4222 8.529424 AATGAGATGAAGATGAGCCATTTAAA 57.471 30.769 0.00 0.00 0.00 1.52
4049 4223 8.529424 AAATGAGATGAAGATGAGCCATTTAA 57.471 30.769 0.00 0.00 33.05 1.52
4050 4224 8.529424 AAAATGAGATGAAGATGAGCCATTTA 57.471 30.769 0.00 0.00 33.50 1.40
4051 4225 7.419711 AAAATGAGATGAAGATGAGCCATTT 57.580 32.000 0.00 0.00 35.34 2.32
4052 4226 7.419711 AAAAATGAGATGAAGATGAGCCATT 57.580 32.000 0.00 0.00 0.00 3.16
4053 4227 7.778853 ACTAAAAATGAGATGAAGATGAGCCAT 59.221 33.333 0.00 0.00 0.00 4.40
4054 4228 7.114754 ACTAAAAATGAGATGAAGATGAGCCA 58.885 34.615 0.00 0.00 0.00 4.75
4055 4229 7.565323 ACTAAAAATGAGATGAAGATGAGCC 57.435 36.000 0.00 0.00 0.00 4.70
4056 4230 9.852091 AAAACTAAAAATGAGATGAAGATGAGC 57.148 29.630 0.00 0.00 0.00 4.26
4064 4238 9.248291 GCACTTCAAAAACTAAAAATGAGATGA 57.752 29.630 0.00 0.00 0.00 2.92
4065 4239 9.033481 TGCACTTCAAAAACTAAAAATGAGATG 57.967 29.630 0.00 0.00 0.00 2.90
4066 4240 9.768662 ATGCACTTCAAAAACTAAAAATGAGAT 57.231 25.926 0.00 0.00 0.00 2.75
4067 4241 9.598517 AATGCACTTCAAAAACTAAAAATGAGA 57.401 25.926 0.00 0.00 0.00 3.27
4077 4251 9.288124 GCAAAAATTTAATGCACTTCAAAAACT 57.712 25.926 18.82 0.00 39.81 2.66
4078 4252 9.070149 TGCAAAAATTTAATGCACTTCAAAAAC 57.930 25.926 21.26 0.00 44.52 2.43
4089 4263 8.455598 AATTCTTGCATGCAAAAATTTAATGC 57.544 26.923 30.14 17.54 34.17 3.56
4095 4269 9.465985 CCTTTTTAATTCTTGCATGCAAAAATT 57.534 25.926 34.73 34.73 39.19 1.82
4096 4270 8.848182 TCCTTTTTAATTCTTGCATGCAAAAAT 58.152 25.926 31.37 27.20 35.33 1.82
4097 4271 8.218338 TCCTTTTTAATTCTTGCATGCAAAAA 57.782 26.923 31.37 26.21 35.33 1.94
4098 4272 7.798596 TCCTTTTTAATTCTTGCATGCAAAA 57.201 28.000 31.37 25.81 35.33 2.44
4099 4273 7.281774 TGTTCCTTTTTAATTCTTGCATGCAAA 59.718 29.630 31.37 19.79 35.33 3.68
4100 4274 6.765036 TGTTCCTTTTTAATTCTTGCATGCAA 59.235 30.769 30.12 30.12 0.00 4.08
4101 4275 6.202570 GTGTTCCTTTTTAATTCTTGCATGCA 59.797 34.615 18.46 18.46 0.00 3.96
4102 4276 6.202570 TGTGTTCCTTTTTAATTCTTGCATGC 59.797 34.615 11.82 11.82 0.00 4.06
4103 4277 7.439056 AGTGTGTTCCTTTTTAATTCTTGCATG 59.561 33.333 0.00 0.00 0.00 4.06
4104 4278 7.500141 AGTGTGTTCCTTTTTAATTCTTGCAT 58.500 30.769 0.00 0.00 0.00 3.96
4105 4279 6.872920 AGTGTGTTCCTTTTTAATTCTTGCA 58.127 32.000 0.00 0.00 0.00 4.08
4106 4280 8.865590 TTAGTGTGTTCCTTTTTAATTCTTGC 57.134 30.769 0.00 0.00 0.00 4.01
4108 4282 9.476202 GCATTAGTGTGTTCCTTTTTAATTCTT 57.524 29.630 0.00 0.00 0.00 2.52
4109 4283 8.637986 TGCATTAGTGTGTTCCTTTTTAATTCT 58.362 29.630 0.00 0.00 0.00 2.40
4110 4284 8.810652 TGCATTAGTGTGTTCCTTTTTAATTC 57.189 30.769 0.00 0.00 0.00 2.17
4111 4285 9.206870 CATGCATTAGTGTGTTCCTTTTTAATT 57.793 29.630 0.00 0.00 0.00 1.40
4112 4286 8.367156 ACATGCATTAGTGTGTTCCTTTTTAAT 58.633 29.630 0.00 0.00 0.00 1.40
4113 4287 7.721402 ACATGCATTAGTGTGTTCCTTTTTAA 58.279 30.769 0.00 0.00 0.00 1.52
4114 4288 7.283625 ACATGCATTAGTGTGTTCCTTTTTA 57.716 32.000 0.00 0.00 0.00 1.52
4115 4289 6.160576 ACATGCATTAGTGTGTTCCTTTTT 57.839 33.333 0.00 0.00 0.00 1.94
4116 4290 5.789643 ACATGCATTAGTGTGTTCCTTTT 57.210 34.783 0.00 0.00 0.00 2.27
4117 4291 6.892658 TTACATGCATTAGTGTGTTCCTTT 57.107 33.333 0.00 0.00 0.00 3.11
4118 4292 6.434028 ACATTACATGCATTAGTGTGTTCCTT 59.566 34.615 0.00 0.00 0.00 3.36
4119 4293 5.945784 ACATTACATGCATTAGTGTGTTCCT 59.054 36.000 0.00 0.00 0.00 3.36
4120 4294 6.194796 ACATTACATGCATTAGTGTGTTCC 57.805 37.500 0.00 0.00 0.00 3.62
4121 4295 8.023128 AGAAACATTACATGCATTAGTGTGTTC 58.977 33.333 16.16 16.63 31.37 3.18
4122 4296 7.885297 AGAAACATTACATGCATTAGTGTGTT 58.115 30.769 13.60 13.17 32.83 3.32
4123 4297 7.452880 AGAAACATTACATGCATTAGTGTGT 57.547 32.000 13.60 10.29 0.00 3.72
4124 4298 8.668353 AGTAGAAACATTACATGCATTAGTGTG 58.332 33.333 13.60 9.01 0.00 3.82
4125 4299 8.792830 AGTAGAAACATTACATGCATTAGTGT 57.207 30.769 0.00 4.05 0.00 3.55
4126 4300 8.882736 TGAGTAGAAACATTACATGCATTAGTG 58.117 33.333 0.00 3.43 0.00 2.74
4127 4301 9.618890 ATGAGTAGAAACATTACATGCATTAGT 57.381 29.630 0.00 0.00 0.00 2.24
4129 4303 9.836864 AGATGAGTAGAAACATTACATGCATTA 57.163 29.630 0.00 0.00 0.00 1.90
4130 4304 8.743085 AGATGAGTAGAAACATTACATGCATT 57.257 30.769 0.00 0.00 0.00 3.56
4131 4305 9.486497 CTAGATGAGTAGAAACATTACATGCAT 57.514 33.333 0.00 0.00 0.00 3.96
4132 4306 8.478066 ACTAGATGAGTAGAAACATTACATGCA 58.522 33.333 0.00 0.00 36.27 3.96
4133 4307 8.759641 CACTAGATGAGTAGAAACATTACATGC 58.240 37.037 0.00 0.00 35.64 4.06
4134 4308 9.254133 CCACTAGATGAGTAGAAACATTACATG 57.746 37.037 0.00 0.00 35.64 3.21
4135 4309 7.928706 GCCACTAGATGAGTAGAAACATTACAT 59.071 37.037 0.00 0.00 35.64 2.29
4136 4310 7.265673 GCCACTAGATGAGTAGAAACATTACA 58.734 38.462 0.00 0.00 35.64 2.41
4137 4311 6.702282 GGCCACTAGATGAGTAGAAACATTAC 59.298 42.308 0.00 0.00 35.64 1.89
4138 4312 6.382859 TGGCCACTAGATGAGTAGAAACATTA 59.617 38.462 0.00 0.00 35.64 1.90
4139 4313 5.189736 TGGCCACTAGATGAGTAGAAACATT 59.810 40.000 0.00 0.00 35.64 2.71
4140 4314 4.716784 TGGCCACTAGATGAGTAGAAACAT 59.283 41.667 0.00 0.00 35.64 2.71
4141 4315 4.093743 TGGCCACTAGATGAGTAGAAACA 58.906 43.478 0.00 0.00 35.64 2.83
4142 4316 4.737855 TGGCCACTAGATGAGTAGAAAC 57.262 45.455 0.00 0.00 35.64 2.78
4143 4317 4.383118 GCTTGGCCACTAGATGAGTAGAAA 60.383 45.833 3.88 0.00 35.64 2.52
4144 4318 3.133003 GCTTGGCCACTAGATGAGTAGAA 59.867 47.826 3.88 0.00 35.64 2.10
4145 4319 2.695666 GCTTGGCCACTAGATGAGTAGA 59.304 50.000 3.88 0.00 35.64 2.59
4146 4320 2.432146 TGCTTGGCCACTAGATGAGTAG 59.568 50.000 3.88 0.00 35.64 2.57
4147 4321 2.466846 TGCTTGGCCACTAGATGAGTA 58.533 47.619 3.88 0.00 35.64 2.59
4148 4322 1.279496 TGCTTGGCCACTAGATGAGT 58.721 50.000 3.88 0.00 39.82 3.41
4149 4323 2.219458 CATGCTTGGCCACTAGATGAG 58.781 52.381 3.88 0.00 0.00 2.90
4150 4324 1.748244 GCATGCTTGGCCACTAGATGA 60.748 52.381 3.88 0.00 0.00 2.92
4151 4325 0.666913 GCATGCTTGGCCACTAGATG 59.333 55.000 3.88 6.90 0.00 2.90
4152 4326 0.256752 TGCATGCTTGGCCACTAGAT 59.743 50.000 20.33 0.00 0.00 1.98
4153 4327 0.256752 ATGCATGCTTGGCCACTAGA 59.743 50.000 20.33 0.00 0.00 2.43
4154 4328 0.384309 CATGCATGCTTGGCCACTAG 59.616 55.000 22.49 1.27 0.00 2.57
4155 4329 2.495809 CATGCATGCTTGGCCACTA 58.504 52.632 22.49 0.00 0.00 2.74
4156 4330 3.294750 CATGCATGCTTGGCCACT 58.705 55.556 22.49 0.00 0.00 4.00
4172 4346 8.655092 GCATTAATTTAAGTTAATTGCAGTGCA 58.345 29.630 15.37 15.37 33.24 4.57
4173 4347 8.655092 TGCATTAATTTAAGTTAATTGCAGTGC 58.345 29.630 21.97 18.06 35.58 4.40
4189 4363 9.715121 ACTCAAATTCAACTCATGCATTAATTT 57.285 25.926 0.00 0.74 0.00 1.82
4192 4366 9.013229 ACTACTCAAATTCAACTCATGCATTAA 57.987 29.630 0.00 0.00 0.00 1.40
4193 4367 8.565896 ACTACTCAAATTCAACTCATGCATTA 57.434 30.769 0.00 0.00 0.00 1.90
4194 4368 7.458409 ACTACTCAAATTCAACTCATGCATT 57.542 32.000 0.00 0.00 0.00 3.56
4195 4369 7.458409 AACTACTCAAATTCAACTCATGCAT 57.542 32.000 0.00 0.00 0.00 3.96
4196 4370 6.882610 AACTACTCAAATTCAACTCATGCA 57.117 33.333 0.00 0.00 0.00 3.96
4197 4371 7.649306 ACAAAACTACTCAAATTCAACTCATGC 59.351 33.333 0.00 0.00 0.00 4.06
4200 4374 9.391006 ACTACAAAACTACTCAAATTCAACTCA 57.609 29.630 0.00 0.00 0.00 3.41
4227 4401 8.717717 TGAGTGGAGGAATGTATCTCATATTTT 58.282 33.333 0.00 0.00 35.48 1.82
4228 4402 8.153550 GTGAGTGGAGGAATGTATCTCATATTT 58.846 37.037 0.00 0.00 35.48 1.40
4229 4403 7.290948 TGTGAGTGGAGGAATGTATCTCATATT 59.709 37.037 0.00 0.00 35.48 1.28
4230 4404 6.784473 TGTGAGTGGAGGAATGTATCTCATAT 59.216 38.462 0.00 0.00 35.48 1.78
4231 4405 6.136155 TGTGAGTGGAGGAATGTATCTCATA 58.864 40.000 0.00 0.00 35.48 2.15
4232 4406 4.964897 TGTGAGTGGAGGAATGTATCTCAT 59.035 41.667 0.00 0.00 38.57 2.90
4233 4407 4.352893 TGTGAGTGGAGGAATGTATCTCA 58.647 43.478 0.00 0.00 0.00 3.27
4234 4408 5.344743 TTGTGAGTGGAGGAATGTATCTC 57.655 43.478 0.00 0.00 0.00 2.75
4235 4409 5.762179 TTTGTGAGTGGAGGAATGTATCT 57.238 39.130 0.00 0.00 0.00 1.98
4236 4410 8.682936 ATATTTTGTGAGTGGAGGAATGTATC 57.317 34.615 0.00 0.00 0.00 2.24
4237 4411 8.497745 AGATATTTTGTGAGTGGAGGAATGTAT 58.502 33.333 0.00 0.00 0.00 2.29
4238 4412 7.861629 AGATATTTTGTGAGTGGAGGAATGTA 58.138 34.615 0.00 0.00 0.00 2.29
4239 4413 6.725364 AGATATTTTGTGAGTGGAGGAATGT 58.275 36.000 0.00 0.00 0.00 2.71
4240 4414 7.415989 CCAAGATATTTTGTGAGTGGAGGAATG 60.416 40.741 5.36 0.00 0.00 2.67
4241 4415 6.604795 CCAAGATATTTTGTGAGTGGAGGAAT 59.395 38.462 5.36 0.00 0.00 3.01
4242 4416 5.945784 CCAAGATATTTTGTGAGTGGAGGAA 59.054 40.000 5.36 0.00 0.00 3.36
4243 4417 5.014123 ACCAAGATATTTTGTGAGTGGAGGA 59.986 40.000 5.36 0.00 0.00 3.71
4244 4418 5.256474 ACCAAGATATTTTGTGAGTGGAGG 58.744 41.667 5.36 0.00 0.00 4.30
4245 4419 6.430925 TCAACCAAGATATTTTGTGAGTGGAG 59.569 38.462 5.36 0.00 0.00 3.86
4246 4420 6.303054 TCAACCAAGATATTTTGTGAGTGGA 58.697 36.000 5.36 0.00 0.00 4.02
4247 4421 6.573664 TCAACCAAGATATTTTGTGAGTGG 57.426 37.500 5.36 0.00 0.00 4.00
4248 4422 7.819644 TCATCAACCAAGATATTTTGTGAGTG 58.180 34.615 5.36 4.83 0.00 3.51
4249 4423 7.884877 TCTCATCAACCAAGATATTTTGTGAGT 59.115 33.333 16.51 3.32 33.54 3.41
4250 4424 8.272545 TCTCATCAACCAAGATATTTTGTGAG 57.727 34.615 13.28 13.28 33.33 3.51
4251 4425 8.812513 ATCTCATCAACCAAGATATTTTGTGA 57.187 30.769 5.36 4.02 0.00 3.58
4252 4426 9.865321 AAATCTCATCAACCAAGATATTTTGTG 57.135 29.630 5.36 0.00 0.00 3.33
4261 4435 9.519191 TCAAATCTTAAATCTCATCAACCAAGA 57.481 29.630 0.00 0.00 0.00 3.02
4263 4437 9.912634 GTTCAAATCTTAAATCTCATCAACCAA 57.087 29.630 0.00 0.00 0.00 3.67
4264 4438 8.522830 GGTTCAAATCTTAAATCTCATCAACCA 58.477 33.333 0.00 0.00 0.00 3.67
4265 4439 7.976175 GGGTTCAAATCTTAAATCTCATCAACC 59.024 37.037 0.00 0.00 0.00 3.77
4266 4440 8.743714 AGGGTTCAAATCTTAAATCTCATCAAC 58.256 33.333 0.00 0.00 0.00 3.18
4267 4441 8.884124 AGGGTTCAAATCTTAAATCTCATCAA 57.116 30.769 0.00 0.00 0.00 2.57
4274 4448 9.946165 CGGTTTATAGGGTTCAAATCTTAAATC 57.054 33.333 0.00 0.00 0.00 2.17
4275 4449 9.689501 TCGGTTTATAGGGTTCAAATCTTAAAT 57.310 29.630 0.00 0.00 0.00 1.40
4276 4450 9.517868 TTCGGTTTATAGGGTTCAAATCTTAAA 57.482 29.630 0.00 0.00 0.00 1.52
4277 4451 9.517868 TTTCGGTTTATAGGGTTCAAATCTTAA 57.482 29.630 0.00 0.00 0.00 1.85
4278 4452 9.517868 TTTTCGGTTTATAGGGTTCAAATCTTA 57.482 29.630 0.00 0.00 0.00 2.10
4279 4453 8.411991 TTTTCGGTTTATAGGGTTCAAATCTT 57.588 30.769 0.00 0.00 0.00 2.40
4280 4454 7.122204 CCTTTTCGGTTTATAGGGTTCAAATCT 59.878 37.037 0.00 0.00 0.00 2.40
4281 4455 7.121611 TCCTTTTCGGTTTATAGGGTTCAAATC 59.878 37.037 0.00 0.00 0.00 2.17
4282 4456 6.949463 TCCTTTTCGGTTTATAGGGTTCAAAT 59.051 34.615 0.00 0.00 0.00 2.32
4283 4457 6.305411 TCCTTTTCGGTTTATAGGGTTCAAA 58.695 36.000 0.00 0.00 0.00 2.69
4284 4458 5.878627 TCCTTTTCGGTTTATAGGGTTCAA 58.121 37.500 0.00 0.00 0.00 2.69
4285 4459 5.493809 CTCCTTTTCGGTTTATAGGGTTCA 58.506 41.667 0.00 0.00 0.00 3.18
4286 4460 4.880120 CCTCCTTTTCGGTTTATAGGGTTC 59.120 45.833 0.00 0.00 0.00 3.62
4287 4461 4.324797 CCCTCCTTTTCGGTTTATAGGGTT 60.325 45.833 0.00 0.00 37.23 4.11
4288 4462 3.201487 CCCTCCTTTTCGGTTTATAGGGT 59.799 47.826 0.00 0.00 37.23 4.34
4289 4463 3.457012 TCCCTCCTTTTCGGTTTATAGGG 59.543 47.826 0.00 0.00 41.33 3.53
4290 4464 4.163649 ACTCCCTCCTTTTCGGTTTATAGG 59.836 45.833 0.00 0.00 0.00 2.57
4291 4465 5.354842 ACTCCCTCCTTTTCGGTTTATAG 57.645 43.478 0.00 0.00 0.00 1.31
4292 4466 5.163374 GCTACTCCCTCCTTTTCGGTTTATA 60.163 44.000 0.00 0.00 0.00 0.98
4293 4467 4.383880 GCTACTCCCTCCTTTTCGGTTTAT 60.384 45.833 0.00 0.00 0.00 1.40
4294 4468 3.055602 GCTACTCCCTCCTTTTCGGTTTA 60.056 47.826 0.00 0.00 0.00 2.01
4295 4469 2.290134 GCTACTCCCTCCTTTTCGGTTT 60.290 50.000 0.00 0.00 0.00 3.27
4296 4470 1.278413 GCTACTCCCTCCTTTTCGGTT 59.722 52.381 0.00 0.00 0.00 4.44
4297 4471 0.903236 GCTACTCCCTCCTTTTCGGT 59.097 55.000 0.00 0.00 0.00 4.69
4298 4472 0.902531 TGCTACTCCCTCCTTTTCGG 59.097 55.000 0.00 0.00 0.00 4.30
4299 4473 2.990066 ATGCTACTCCCTCCTTTTCG 57.010 50.000 0.00 0.00 0.00 3.46
4300 4474 4.222124 TGAATGCTACTCCCTCCTTTTC 57.778 45.455 0.00 0.00 0.00 2.29
4301 4475 4.289672 TCTTGAATGCTACTCCCTCCTTTT 59.710 41.667 0.00 0.00 0.00 2.27
4302 4476 3.846588 TCTTGAATGCTACTCCCTCCTTT 59.153 43.478 0.00 0.00 0.00 3.11
4303 4477 3.454858 TCTTGAATGCTACTCCCTCCTT 58.545 45.455 0.00 0.00 0.00 3.36
4304 4478 3.121929 TCTTGAATGCTACTCCCTCCT 57.878 47.619 0.00 0.00 0.00 3.69
4305 4479 3.432890 CCTTCTTGAATGCTACTCCCTCC 60.433 52.174 0.00 0.00 0.00 4.30
4306 4480 3.432890 CCCTTCTTGAATGCTACTCCCTC 60.433 52.174 0.00 0.00 0.00 4.30
4307 4481 2.507471 CCCTTCTTGAATGCTACTCCCT 59.493 50.000 0.00 0.00 0.00 4.20
4308 4482 2.239907 ACCCTTCTTGAATGCTACTCCC 59.760 50.000 0.00 0.00 0.00 4.30
4309 4483 3.636153 ACCCTTCTTGAATGCTACTCC 57.364 47.619 0.00 0.00 0.00 3.85
4310 4484 3.942115 GGAACCCTTCTTGAATGCTACTC 59.058 47.826 0.00 0.00 0.00 2.59
4311 4485 3.956744 GGAACCCTTCTTGAATGCTACT 58.043 45.455 0.00 0.00 0.00 2.57
4329 4503 1.374252 GACTCGCGCTTTCAGGGAA 60.374 57.895 5.56 0.00 0.00 3.97
4342 4516 4.982295 TGAATCTATGCAATTACGGACTCG 59.018 41.667 0.00 0.00 43.02 4.18
4365 4539 8.798859 ATGCAATTAGAGACTCTGTTTATTGT 57.201 30.769 15.55 3.10 0.00 2.71
4405 4583 8.262227 ACAGCCAAATCATGAAATAAATGACAT 58.738 29.630 0.00 0.00 36.89 3.06
4435 4613 1.606668 CCACACACGCAACAACCTAAT 59.393 47.619 0.00 0.00 0.00 1.73
4464 4642 6.167685 TGTACGACATGTTAGCCTATTGTTT 58.832 36.000 0.00 0.00 0.00 2.83
4483 4662 5.794687 TGTTCTTTTAGGCATGATGTACG 57.205 39.130 0.00 0.00 0.00 3.67
4489 4668 4.406456 ACCACATGTTCTTTTAGGCATGA 58.594 39.130 9.89 0.00 40.61 3.07
4501 4680 2.086869 AGCATGCTGTACCACATGTTC 58.913 47.619 21.98 9.52 44.43 3.18
4539 4719 6.041979 AGCTGAAAATGCTAAAAGGGAAAAGA 59.958 34.615 0.00 0.00 39.21 2.52
4580 4760 4.079970 TCATATAGGAGGAAGGCGTACTG 58.920 47.826 0.00 0.00 0.00 2.74
4658 4838 7.858498 AGGAGTACTATCTATCTAGCTCTTCC 58.142 42.308 0.00 0.00 0.00 3.46
4797 5141 2.815308 GGTGATGGCGTCGGAGAT 59.185 61.111 1.67 0.00 40.67 2.75
4976 5433 0.822164 GCTTAAGGTAGGAGGCGTCA 59.178 55.000 8.91 0.00 0.00 4.35
5069 5526 2.832201 GCGAGGTAGTACCGGCCT 60.832 66.667 21.23 0.00 44.90 5.19
5462 5949 3.384532 GCGGGGAAGTCGGTGGTA 61.385 66.667 0.00 0.00 0.00 3.25
5507 5994 2.816958 CGGCTCACATTCTGCGCT 60.817 61.111 9.73 0.00 0.00 5.92
5720 6207 1.078426 CCTCATTGGTGGGTCGTCC 60.078 63.158 0.00 0.00 0.00 4.79
6058 6545 9.424319 TCTGACTGAAAAGTATCTGAATTACAC 57.576 33.333 0.00 0.00 0.00 2.90
6152 8148 9.088512 CACTACTAAGATTGATTTCAGTGTACC 57.911 37.037 0.00 0.00 0.00 3.34
6175 8171 9.838339 AATGATAGCTGTACTTTATTTAGCACT 57.162 29.630 0.00 0.00 36.87 4.40
6193 8408 2.618709 GTGGCTGGTGGTAAATGATAGC 59.381 50.000 0.00 0.00 0.00 2.97
6247 8488 3.728385 AGCCAGGTAGATCTTTTTGCT 57.272 42.857 0.00 0.40 0.00 3.91
6270 8511 7.649533 TTATTGTACAGCTAGCCAAGTACTA 57.350 36.000 28.14 24.30 38.09 1.82
6271 8512 6.540438 TTATTGTACAGCTAGCCAAGTACT 57.460 37.500 28.14 18.63 38.09 2.73
6272 8513 5.234543 GCTTATTGTACAGCTAGCCAAGTAC 59.765 44.000 24.59 24.59 37.82 2.73
6359 8600 2.290260 TGTGGAGCCTGGAGTTATGTTG 60.290 50.000 0.00 0.00 0.00 3.33
6387 8628 1.619654 TTTGTGGCTTGACCCATCTG 58.380 50.000 0.00 0.00 37.20 2.90
6767 9010 3.660669 AGGGTTTGATGGGAACTAGGAAA 59.339 43.478 0.00 0.00 0.00 3.13
6783 9026 6.265304 AGAGGTGAGTAGAATAGAAGGGTTT 58.735 40.000 0.00 0.00 0.00 3.27
6888 9131 5.978919 TGTAGTTTTGATGCAAAAGAAGCAG 59.021 36.000 5.64 0.00 46.36 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.