Multiple sequence alignment - TraesCS5B01G148700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G148700 chr5B 100.000 3542 0 0 1 3542 276905418 276908959 0.000000e+00 6541
1 TraesCS5B01G148700 chr5B 84.761 1634 240 8 922 2549 276899782 276901412 0.000000e+00 1629
2 TraesCS5B01G148700 chr5A 97.153 2634 68 4 914 3542 327916995 327919626 0.000000e+00 4442
3 TraesCS5B01G148700 chr5A 83.038 1639 249 14 932 2566 327908263 327909876 0.000000e+00 1459
4 TraesCS5B01G148700 chr5A 83.039 737 88 18 1847 2549 327910326 327911059 4.990000e-178 634
5 TraesCS5B01G148700 chr5A 94.723 379 18 2 384 760 327916640 327917018 3.940000e-164 588
6 TraesCS5B01G148700 chr5D 98.276 1798 28 2 914 2708 243807488 243809285 0.000000e+00 3145
7 TraesCS5B01G148700 chr5D 82.619 1634 254 16 921 2549 228960124 228958516 0.000000e+00 1417
8 TraesCS5B01G148700 chr5D 95.880 534 21 1 2701 3233 243816201 243816734 0.000000e+00 863
9 TraesCS5B01G148700 chr5D 95.420 393 17 1 369 760 243807119 243807511 3.000000e-175 625
10 TraesCS5B01G148700 chr5D 96.541 318 11 0 3225 3542 243817687 243818004 8.710000e-146 527
11 TraesCS5B01G148700 chr3B 95.058 344 16 1 12 354 800019032 800019375 1.120000e-149 540
12 TraesCS5B01G148700 chr3B 93.768 353 20 2 12 362 704532477 704532125 2.420000e-146 529
13 TraesCS5B01G148700 chr1B 94.813 347 17 1 9 354 573440207 573440553 1.120000e-149 540
14 TraesCS5B01G148700 chr1B 94.767 344 17 1 12 354 563062530 563062873 5.200000e-148 534
15 TraesCS5B01G148700 chr1B 98.204 167 1 1 757 921 632146238 632146404 1.240000e-74 291
16 TraesCS5B01G148700 chr4A 94.798 346 17 1 10 354 691286247 691286592 4.020000e-149 538
17 TraesCS5B01G148700 chr4A 93.768 353 21 1 5 356 663759602 663759954 2.420000e-146 529
18 TraesCS5B01G148700 chr7B 94.767 344 16 2 12 354 426974416 426974758 5.200000e-148 534
19 TraesCS5B01G148700 chr3A 94.509 346 17 2 12 356 468166212 468165868 1.870000e-147 532
20 TraesCS5B01G148700 chr2B 93.931 346 20 1 12 356 650231619 650231274 4.050000e-144 521
21 TraesCS5B01G148700 chr2B 99.398 166 1 0 756 921 10586064 10585899 5.750000e-78 302
22 TraesCS5B01G148700 chr6D 92.245 245 19 0 2616 2860 283196484 283196728 7.280000e-92 348
23 TraesCS5B01G148700 chr2A 92.245 245 19 0 2616 2860 444311982 444312226 7.280000e-92 348
24 TraesCS5B01G148700 chr2A 97.674 172 3 1 751 921 377018121 377017950 9.620000e-76 294
25 TraesCS5B01G148700 chr2A 98.788 165 2 0 757 921 746771795 746771631 9.620000e-76 294
26 TraesCS5B01G148700 chr1D 92.245 245 19 0 2616 2860 351059202 351058958 7.280000e-92 348
27 TraesCS5B01G148700 chr2D 91.837 245 20 0 2616 2860 306156318 306156562 3.390000e-90 342
28 TraesCS5B01G148700 chr2D 91.949 236 19 0 2616 2851 291678547 291678782 7.330000e-87 331
29 TraesCS5B01G148700 chr2D 89.431 246 25 1 2616 2860 291775793 291775548 3.430000e-80 309
30 TraesCS5B01G148700 chr6A 91.429 245 21 0 2616 2860 375868028 375868272 1.580000e-88 337
31 TraesCS5B01G148700 chr6A 99.394 165 1 0 757 921 605336212 605336048 2.070000e-77 300
32 TraesCS5B01G148700 chr7A 99.394 165 1 0 757 921 439577966 439578130 2.070000e-77 300
33 TraesCS5B01G148700 chrUn 98.788 165 2 0 757 921 71105082 71105246 9.620000e-76 294
34 TraesCS5B01G148700 chrUn 98.788 165 2 0 757 921 281488229 281488065 9.620000e-76 294
35 TraesCS5B01G148700 chr1A 98.204 167 1 1 757 921 425241094 425241260 1.240000e-74 291


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G148700 chr5B 276905418 276908959 3541 False 6541.0 6541 100.0000 1 3542 1 chr5B.!!$F2 3541
1 TraesCS5B01G148700 chr5B 276899782 276901412 1630 False 1629.0 1629 84.7610 922 2549 1 chr5B.!!$F1 1627
2 TraesCS5B01G148700 chr5A 327916640 327919626 2986 False 2515.0 4442 95.9380 384 3542 2 chr5A.!!$F2 3158
3 TraesCS5B01G148700 chr5A 327908263 327911059 2796 False 1046.5 1459 83.0385 932 2566 2 chr5A.!!$F1 1634
4 TraesCS5B01G148700 chr5D 243807119 243809285 2166 False 1885.0 3145 96.8480 369 2708 2 chr5D.!!$F1 2339
5 TraesCS5B01G148700 chr5D 228958516 228960124 1608 True 1417.0 1417 82.6190 921 2549 1 chr5D.!!$R1 1628
6 TraesCS5B01G148700 chr5D 243816201 243818004 1803 False 695.0 863 96.2105 2701 3542 2 chr5D.!!$F2 841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 756 0.036671 CCCACTCAAACCCCTACGTC 60.037 60.0 0.0 0.0 0.0 4.34 F
755 757 0.036671 CCACTCAAACCCCTACGTCC 60.037 60.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2118 2123 1.228033 ACGGACCTTTTCAACCCCG 60.228 57.895 0.0 0.0 42.3 5.73 R
2754 3935 1.885887 CGGGGCTTGACTTGATTTTGA 59.114 47.619 0.0 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.567138 CCACTATTTTTAGAGGGTGCTTG 57.433 43.478 0.00 0.00 0.00 4.01
23 24 4.399303 CCACTATTTTTAGAGGGTGCTTGG 59.601 45.833 0.00 0.00 0.00 3.61
24 25 5.253330 CACTATTTTTAGAGGGTGCTTGGA 58.747 41.667 0.00 0.00 0.00 3.53
25 26 5.888161 CACTATTTTTAGAGGGTGCTTGGAT 59.112 40.000 0.00 0.00 0.00 3.41
26 27 7.054124 CACTATTTTTAGAGGGTGCTTGGATA 58.946 38.462 0.00 0.00 0.00 2.59
27 28 7.012421 CACTATTTTTAGAGGGTGCTTGGATAC 59.988 40.741 0.00 0.00 0.00 2.24
28 29 3.536956 TTTAGAGGGTGCTTGGATACG 57.463 47.619 0.00 0.00 42.51 3.06
29 30 2.154567 TAGAGGGTGCTTGGATACGT 57.845 50.000 0.00 0.00 42.51 3.57
30 31 1.276622 AGAGGGTGCTTGGATACGTT 58.723 50.000 0.00 0.00 42.51 3.99
31 32 1.628846 AGAGGGTGCTTGGATACGTTT 59.371 47.619 0.00 0.00 42.51 3.60
32 33 2.039879 AGAGGGTGCTTGGATACGTTTT 59.960 45.455 0.00 0.00 42.51 2.43
33 34 3.262405 AGAGGGTGCTTGGATACGTTTTA 59.738 43.478 0.00 0.00 42.51 1.52
34 35 3.606687 AGGGTGCTTGGATACGTTTTAG 58.393 45.455 0.00 0.00 42.51 1.85
35 36 3.008704 AGGGTGCTTGGATACGTTTTAGT 59.991 43.478 0.00 0.00 42.51 2.24
36 37 3.373130 GGGTGCTTGGATACGTTTTAGTC 59.627 47.826 0.00 0.00 42.51 2.59
37 38 3.373130 GGTGCTTGGATACGTTTTAGTCC 59.627 47.826 0.00 0.00 42.51 3.85
38 39 4.251268 GTGCTTGGATACGTTTTAGTCCT 58.749 43.478 0.00 0.00 42.51 3.85
39 40 5.413499 GTGCTTGGATACGTTTTAGTCCTA 58.587 41.667 0.00 0.00 42.51 2.94
40 41 6.047231 GTGCTTGGATACGTTTTAGTCCTAT 58.953 40.000 0.00 0.00 42.51 2.57
41 42 6.018994 GTGCTTGGATACGTTTTAGTCCTATG 60.019 42.308 0.00 0.00 42.51 2.23
42 43 6.127281 TGCTTGGATACGTTTTAGTCCTATGA 60.127 38.462 0.00 0.00 42.51 2.15
43 44 6.200475 GCTTGGATACGTTTTAGTCCTATGAC 59.800 42.308 0.00 0.00 40.25 3.06
45 46 8.523915 TTGGATACGTTTTAGTCCTATGACTA 57.476 34.615 3.96 3.96 45.97 2.59
57 58 6.786967 GTCCTATGACTAAAAGTAGTGGGA 57.213 41.667 0.00 0.00 40.82 4.37
58 59 6.571605 GTCCTATGACTAAAAGTAGTGGGAC 58.428 44.000 9.41 9.41 40.82 4.46
59 60 6.380560 GTCCTATGACTAAAAGTAGTGGGACT 59.619 42.308 14.28 0.00 40.82 3.85
60 61 7.559170 GTCCTATGACTAAAAGTAGTGGGACTA 59.441 40.741 14.28 0.00 40.82 2.59
61 62 8.117956 TCCTATGACTAAAAGTAGTGGGACTAA 58.882 37.037 0.00 0.00 40.82 2.24
62 63 8.755977 CCTATGACTAAAAGTAGTGGGACTAAA 58.244 37.037 0.00 0.00 40.82 1.85
64 65 8.843885 ATGACTAAAAGTAGTGGGACTAAAAC 57.156 34.615 0.00 0.00 40.82 2.43
65 66 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
66 67 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
67 68 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
68 69 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
69 70 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
70 71 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
71 72 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
72 73 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
73 74 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
74 75 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
75 76 3.010420 GGGACTAAAACTTGCTAGCCTG 58.990 50.000 13.29 7.40 0.00 4.85
76 77 3.307480 GGGACTAAAACTTGCTAGCCTGA 60.307 47.826 13.29 0.00 0.00 3.86
77 78 3.685272 GGACTAAAACTTGCTAGCCTGAC 59.315 47.826 13.29 0.00 0.00 3.51
78 79 3.676093 ACTAAAACTTGCTAGCCTGACC 58.324 45.455 13.29 0.00 0.00 4.02
79 80 1.911057 AAAACTTGCTAGCCTGACCC 58.089 50.000 13.29 0.00 0.00 4.46
80 81 0.771127 AAACTTGCTAGCCTGACCCA 59.229 50.000 13.29 0.00 0.00 4.51
81 82 0.995024 AACTTGCTAGCCTGACCCAT 59.005 50.000 13.29 0.00 0.00 4.00
82 83 0.254178 ACTTGCTAGCCTGACCCATG 59.746 55.000 13.29 0.00 0.00 3.66
83 84 1.077501 TTGCTAGCCTGACCCATGC 60.078 57.895 13.29 0.00 0.00 4.06
84 85 1.565390 TTGCTAGCCTGACCCATGCT 61.565 55.000 13.29 0.00 38.71 3.79
85 86 1.225704 GCTAGCCTGACCCATGCTT 59.774 57.895 2.29 0.00 36.74 3.91
86 87 1.099879 GCTAGCCTGACCCATGCTTG 61.100 60.000 2.29 2.48 36.74 4.01
87 88 0.465097 CTAGCCTGACCCATGCTTGG 60.465 60.000 11.68 11.68 43.23 3.61
88 89 0.913934 TAGCCTGACCCATGCTTGGA 60.914 55.000 19.85 0.00 46.92 3.53
89 90 1.076485 GCCTGACCCATGCTTGGAT 60.076 57.895 19.85 1.82 46.92 3.41
90 91 0.183492 GCCTGACCCATGCTTGGATA 59.817 55.000 19.85 4.97 46.92 2.59
91 92 1.972872 CCTGACCCATGCTTGGATAC 58.027 55.000 19.85 10.55 46.92 2.24
92 93 1.212688 CCTGACCCATGCTTGGATACA 59.787 52.381 19.85 14.00 46.92 2.29
126 127 9.817809 AATAGACTAAAATCGAGTTAATGAGCA 57.182 29.630 0.00 0.00 0.00 4.26
127 128 9.988815 ATAGACTAAAATCGAGTTAATGAGCAT 57.011 29.630 0.00 0.00 0.00 3.79
128 129 8.723942 AGACTAAAATCGAGTTAATGAGCATT 57.276 30.769 0.00 0.97 34.93 3.56
129 130 9.167311 AGACTAAAATCGAGTTAATGAGCATTT 57.833 29.630 0.00 0.00 32.50 2.32
137 138 9.950496 ATCGAGTTAATGAGCATTTATTATCCT 57.050 29.630 0.52 0.00 32.50 3.24
138 139 9.424319 TCGAGTTAATGAGCATTTATTATCCTC 57.576 33.333 0.52 0.00 32.50 3.71
139 140 9.208022 CGAGTTAATGAGCATTTATTATCCTCA 57.792 33.333 0.52 0.00 37.01 3.86
146 147 9.597681 ATGAGCATTTATTATCCTCAAAATCCT 57.402 29.630 0.00 0.00 36.29 3.24
147 148 9.071276 TGAGCATTTATTATCCTCAAAATCCTC 57.929 33.333 0.00 0.00 30.26 3.71
148 149 8.414629 AGCATTTATTATCCTCAAAATCCTCC 57.585 34.615 0.00 0.00 0.00 4.30
149 150 8.006564 AGCATTTATTATCCTCAAAATCCTCCA 58.993 33.333 0.00 0.00 0.00 3.86
150 151 8.641541 GCATTTATTATCCTCAAAATCCTCCAA 58.358 33.333 0.00 0.00 0.00 3.53
153 154 8.940397 TTATTATCCTCAAAATCCTCCAATCC 57.060 34.615 0.00 0.00 0.00 3.01
154 155 4.886755 ATCCTCAAAATCCTCCAATCCA 57.113 40.909 0.00 0.00 0.00 3.41
155 156 4.240881 TCCTCAAAATCCTCCAATCCAG 57.759 45.455 0.00 0.00 0.00 3.86
156 157 3.851976 TCCTCAAAATCCTCCAATCCAGA 59.148 43.478 0.00 0.00 0.00 3.86
157 158 4.292041 TCCTCAAAATCCTCCAATCCAGAA 59.708 41.667 0.00 0.00 0.00 3.02
158 159 4.400567 CCTCAAAATCCTCCAATCCAGAAC 59.599 45.833 0.00 0.00 0.00 3.01
159 160 5.259632 CTCAAAATCCTCCAATCCAGAACT 58.740 41.667 0.00 0.00 0.00 3.01
160 161 5.256474 TCAAAATCCTCCAATCCAGAACTC 58.744 41.667 0.00 0.00 0.00 3.01
161 162 4.934797 AAATCCTCCAATCCAGAACTCA 57.065 40.909 0.00 0.00 0.00 3.41
162 163 3.922171 ATCCTCCAATCCAGAACTCAC 57.078 47.619 0.00 0.00 0.00 3.51
163 164 1.550524 TCCTCCAATCCAGAACTCACG 59.449 52.381 0.00 0.00 0.00 4.35
164 165 1.276421 CCTCCAATCCAGAACTCACGT 59.724 52.381 0.00 0.00 0.00 4.49
165 166 2.341257 CTCCAATCCAGAACTCACGTG 58.659 52.381 9.94 9.94 0.00 4.49
166 167 1.691976 TCCAATCCAGAACTCACGTGT 59.308 47.619 16.51 0.00 0.00 4.49
167 168 1.800586 CCAATCCAGAACTCACGTGTG 59.199 52.381 16.51 16.06 0.00 3.82
168 169 2.483876 CAATCCAGAACTCACGTGTGT 58.516 47.619 17.06 17.06 0.00 3.72
169 170 2.872245 CAATCCAGAACTCACGTGTGTT 59.128 45.455 30.00 30.00 34.84 3.32
170 171 4.055360 CAATCCAGAACTCACGTGTGTTA 58.945 43.478 29.73 17.99 32.63 2.41
171 172 3.804786 TCCAGAACTCACGTGTGTTAA 57.195 42.857 29.73 16.11 32.63 2.01
172 173 4.126208 TCCAGAACTCACGTGTGTTAAA 57.874 40.909 29.73 15.82 32.63 1.52
173 174 4.116961 TCCAGAACTCACGTGTGTTAAAG 58.883 43.478 29.73 22.05 32.63 1.85
174 175 4.116961 CCAGAACTCACGTGTGTTAAAGA 58.883 43.478 29.73 2.69 32.63 2.52
175 176 4.569162 CCAGAACTCACGTGTGTTAAAGAA 59.431 41.667 29.73 1.96 32.63 2.52
176 177 5.276868 CCAGAACTCACGTGTGTTAAAGAAG 60.277 44.000 29.73 17.43 32.63 2.85
177 178 5.518847 CAGAACTCACGTGTGTTAAAGAAGA 59.481 40.000 29.73 0.72 32.63 2.87
178 179 5.749109 AGAACTCACGTGTGTTAAAGAAGAG 59.251 40.000 29.73 12.42 32.63 2.85
179 180 4.369182 ACTCACGTGTGTTAAAGAAGAGG 58.631 43.478 17.06 0.00 0.00 3.69
180 181 4.098960 ACTCACGTGTGTTAAAGAAGAGGA 59.901 41.667 17.06 0.00 0.00 3.71
181 182 4.617959 TCACGTGTGTTAAAGAAGAGGAG 58.382 43.478 16.51 0.00 0.00 3.69
182 183 4.098960 TCACGTGTGTTAAAGAAGAGGAGT 59.901 41.667 16.51 0.00 0.00 3.85
183 184 4.809426 CACGTGTGTTAAAGAAGAGGAGTT 59.191 41.667 7.58 0.00 0.00 3.01
184 185 5.981315 CACGTGTGTTAAAGAAGAGGAGTTA 59.019 40.000 7.58 0.00 0.00 2.24
185 186 6.477688 CACGTGTGTTAAAGAAGAGGAGTTAA 59.522 38.462 7.58 0.00 0.00 2.01
186 187 7.010738 CACGTGTGTTAAAGAAGAGGAGTTAAA 59.989 37.037 7.58 0.00 0.00 1.52
187 188 7.713942 ACGTGTGTTAAAGAAGAGGAGTTAAAT 59.286 33.333 0.00 0.00 0.00 1.40
188 189 8.009974 CGTGTGTTAAAGAAGAGGAGTTAAATG 58.990 37.037 0.00 0.00 0.00 2.32
189 190 9.052759 GTGTGTTAAAGAAGAGGAGTTAAATGA 57.947 33.333 0.00 0.00 0.00 2.57
190 191 9.273016 TGTGTTAAAGAAGAGGAGTTAAATGAG 57.727 33.333 0.00 0.00 0.00 2.90
191 192 8.722394 GTGTTAAAGAAGAGGAGTTAAATGAGG 58.278 37.037 0.00 0.00 0.00 3.86
192 193 8.656806 TGTTAAAGAAGAGGAGTTAAATGAGGA 58.343 33.333 0.00 0.00 0.00 3.71
193 194 9.157104 GTTAAAGAAGAGGAGTTAAATGAGGAG 57.843 37.037 0.00 0.00 0.00 3.69
194 195 7.560796 AAAGAAGAGGAGTTAAATGAGGAGA 57.439 36.000 0.00 0.00 0.00 3.71
195 196 6.790232 AGAAGAGGAGTTAAATGAGGAGAG 57.210 41.667 0.00 0.00 0.00 3.20
196 197 6.498538 AGAAGAGGAGTTAAATGAGGAGAGA 58.501 40.000 0.00 0.00 0.00 3.10
197 198 6.607198 AGAAGAGGAGTTAAATGAGGAGAGAG 59.393 42.308 0.00 0.00 0.00 3.20
198 199 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
199 200 6.129179 AGAGGAGTTAAATGAGGAGAGAGAG 58.871 44.000 0.00 0.00 0.00 3.20
200 201 5.208121 AGGAGTTAAATGAGGAGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
201 202 5.043732 AGGAGTTAAATGAGGAGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
202 203 5.068591 GGAGTTAAATGAGGAGAGAGAGGAC 59.931 48.000 0.00 0.00 0.00 3.85
203 204 5.837829 AGTTAAATGAGGAGAGAGAGGACT 58.162 41.667 0.00 0.00 0.00 3.85
204 205 6.975949 AGTTAAATGAGGAGAGAGAGGACTA 58.024 40.000 0.00 0.00 0.00 2.59
205 206 7.415086 AGTTAAATGAGGAGAGAGAGGACTAA 58.585 38.462 0.00 0.00 0.00 2.24
206 207 8.065007 AGTTAAATGAGGAGAGAGAGGACTAAT 58.935 37.037 0.00 0.00 0.00 1.73
207 208 6.976934 AAATGAGGAGAGAGAGGACTAATC 57.023 41.667 0.00 0.00 0.00 1.75
208 209 4.447138 TGAGGAGAGAGAGGACTAATCC 57.553 50.000 0.00 0.00 46.69 3.01
225 226 9.628500 GGACTAATCCACATTTTAGTAGGATTT 57.372 33.333 9.93 0.00 44.38 2.17
227 228 9.628500 ACTAATCCACATTTTAGTAGGATTTCC 57.372 33.333 9.93 0.00 44.38 3.13
228 229 7.898014 AATCCACATTTTAGTAGGATTTCCC 57.102 36.000 0.00 0.00 44.38 3.97
229 230 7.652554 AATCCACATTTTAGTAGGATTTCCCT 58.347 34.615 0.00 0.00 44.38 4.20
230 231 7.561356 AATCCACATTTTAGTAGGATTTCCCTG 59.439 37.037 0.00 0.00 44.38 4.45
269 270 7.255491 GTCTTAAGACTAGTTCTAGCCTCTC 57.745 44.000 25.30 0.00 41.65 3.20
270 271 7.052248 GTCTTAAGACTAGTTCTAGCCTCTCT 58.948 42.308 25.30 0.60 41.65 3.10
271 272 7.555195 GTCTTAAGACTAGTTCTAGCCTCTCTT 59.445 40.741 25.30 9.92 41.65 2.85
272 273 8.110908 TCTTAAGACTAGTTCTAGCCTCTCTTT 58.889 37.037 0.00 0.00 32.51 2.52
273 274 9.398538 CTTAAGACTAGTTCTAGCCTCTCTTTA 57.601 37.037 0.00 6.30 32.51 1.85
274 275 7.875327 AAGACTAGTTCTAGCCTCTCTTTAG 57.125 40.000 0.00 0.00 32.51 1.85
275 276 6.965607 AGACTAGTTCTAGCCTCTCTTTAGT 58.034 40.000 0.00 0.00 30.17 2.24
276 277 7.052248 AGACTAGTTCTAGCCTCTCTTTAGTC 58.948 42.308 0.00 0.00 36.42 2.59
277 278 6.723339 ACTAGTTCTAGCCTCTCTTTAGTCA 58.277 40.000 6.75 0.00 0.00 3.41
278 279 6.826741 ACTAGTTCTAGCCTCTCTTTAGTCAG 59.173 42.308 6.75 0.00 0.00 3.51
279 280 4.953579 AGTTCTAGCCTCTCTTTAGTCAGG 59.046 45.833 0.00 0.00 0.00 3.86
280 281 4.864483 TCTAGCCTCTCTTTAGTCAGGA 57.136 45.455 0.00 0.00 0.00 3.86
281 282 5.194473 TCTAGCCTCTCTTTAGTCAGGAA 57.806 43.478 0.00 0.00 0.00 3.36
282 283 5.772004 TCTAGCCTCTCTTTAGTCAGGAAT 58.228 41.667 0.00 0.00 0.00 3.01
283 284 4.751767 AGCCTCTCTTTAGTCAGGAATG 57.248 45.455 0.00 0.00 0.00 2.67
284 285 4.357325 AGCCTCTCTTTAGTCAGGAATGA 58.643 43.478 0.00 0.00 0.00 2.57
285 286 4.968080 AGCCTCTCTTTAGTCAGGAATGAT 59.032 41.667 0.00 0.00 0.00 2.45
286 287 5.428131 AGCCTCTCTTTAGTCAGGAATGATT 59.572 40.000 0.00 0.00 0.00 2.57
287 288 5.526846 GCCTCTCTTTAGTCAGGAATGATTG 59.473 44.000 0.00 0.00 0.00 2.67
288 289 6.054295 CCTCTCTTTAGTCAGGAATGATTGG 58.946 44.000 0.00 0.00 0.00 3.16
289 290 6.126940 CCTCTCTTTAGTCAGGAATGATTGGA 60.127 42.308 0.00 0.00 0.00 3.53
290 291 7.257790 TCTCTTTAGTCAGGAATGATTGGAA 57.742 36.000 0.00 0.00 0.00 3.53
291 292 7.106239 TCTCTTTAGTCAGGAATGATTGGAAC 58.894 38.462 0.00 0.00 0.00 3.62
292 293 7.020827 TCTTTAGTCAGGAATGATTGGAACT 57.979 36.000 0.00 0.00 0.00 3.01
293 294 7.461749 TCTTTAGTCAGGAATGATTGGAACTT 58.538 34.615 0.00 0.00 0.00 2.66
294 295 7.944554 TCTTTAGTCAGGAATGATTGGAACTTT 59.055 33.333 0.00 0.00 0.00 2.66
295 296 9.231297 CTTTAGTCAGGAATGATTGGAACTTTA 57.769 33.333 0.00 0.00 0.00 1.85
296 297 8.792830 TTAGTCAGGAATGATTGGAACTTTAG 57.207 34.615 0.00 0.00 0.00 1.85
297 298 5.649831 AGTCAGGAATGATTGGAACTTTAGC 59.350 40.000 0.00 0.00 0.00 3.09
298 299 4.949856 TCAGGAATGATTGGAACTTTAGCC 59.050 41.667 0.00 0.00 0.00 3.93
299 300 4.952335 CAGGAATGATTGGAACTTTAGCCT 59.048 41.667 0.00 0.00 0.00 4.58
300 301 5.067023 CAGGAATGATTGGAACTTTAGCCTC 59.933 44.000 0.00 0.00 0.00 4.70
301 302 5.044550 AGGAATGATTGGAACTTTAGCCTCT 60.045 40.000 0.00 0.00 0.00 3.69
302 303 6.158695 AGGAATGATTGGAACTTTAGCCTCTA 59.841 38.462 0.00 0.00 0.00 2.43
303 304 6.828785 GGAATGATTGGAACTTTAGCCTCTAA 59.171 38.462 0.00 0.00 0.00 2.10
304 305 7.339466 GGAATGATTGGAACTTTAGCCTCTAAA 59.661 37.037 0.00 0.00 0.00 1.85
305 306 8.650143 AATGATTGGAACTTTAGCCTCTAAAA 57.350 30.769 1.38 0.00 0.00 1.52
306 307 7.687941 TGATTGGAACTTTAGCCTCTAAAAG 57.312 36.000 1.38 0.00 38.41 2.27
307 308 7.458397 TGATTGGAACTTTAGCCTCTAAAAGA 58.542 34.615 2.08 0.00 36.43 2.52
308 309 7.607991 TGATTGGAACTTTAGCCTCTAAAAGAG 59.392 37.037 2.08 0.00 41.96 2.85
309 310 6.681729 TGGAACTTTAGCCTCTAAAAGAGA 57.318 37.500 5.50 0.00 45.07 3.10
310 311 6.465084 TGGAACTTTAGCCTCTAAAAGAGAC 58.535 40.000 5.50 0.00 45.07 3.36
311 312 6.270231 TGGAACTTTAGCCTCTAAAAGAGACT 59.730 38.462 5.50 1.89 45.07 3.24
312 313 7.453752 TGGAACTTTAGCCTCTAAAAGAGACTA 59.546 37.037 5.50 0.91 45.07 2.59
313 314 7.977293 GGAACTTTAGCCTCTAAAAGAGACTAG 59.023 40.741 5.50 0.00 45.07 2.57
314 315 8.425237 AACTTTAGCCTCTAAAAGAGACTAGT 57.575 34.615 5.50 0.00 45.07 2.57
315 316 8.425237 ACTTTAGCCTCTAAAAGAGACTAGTT 57.575 34.615 5.50 0.00 45.07 2.24
316 317 8.872134 ACTTTAGCCTCTAAAAGAGACTAGTTT 58.128 33.333 5.50 0.00 45.07 2.66
317 318 9.713713 CTTTAGCCTCTAAAAGAGACTAGTTTT 57.286 33.333 5.50 0.00 45.07 2.43
320 321 8.425237 AGCCTCTAAAAGAGACTAGTTTTAGT 57.575 34.615 18.01 3.65 45.07 2.24
341 342 9.720769 TTTAGTCAGACTAAAAATAGTCCCTTG 57.279 33.333 26.93 5.29 44.84 3.61
342 343 7.554959 AGTCAGACTAAAAATAGTCCCTTGA 57.445 36.000 0.00 7.17 45.66 3.02
343 344 7.974504 AGTCAGACTAAAAATAGTCCCTTGAA 58.025 34.615 0.00 0.00 45.66 2.69
344 345 8.606830 AGTCAGACTAAAAATAGTCCCTTGAAT 58.393 33.333 0.00 6.62 45.66 2.57
345 346 9.232473 GTCAGACTAAAAATAGTCCCTTGAATT 57.768 33.333 11.35 0.00 45.66 2.17
346 347 9.449719 TCAGACTAAAAATAGTCCCTTGAATTC 57.550 33.333 11.35 0.00 45.66 2.17
347 348 9.231297 CAGACTAAAAATAGTCCCTTGAATTCA 57.769 33.333 3.38 3.38 45.66 2.57
348 349 9.454859 AGACTAAAAATAGTCCCTTGAATTCAG 57.545 33.333 8.41 3.35 45.66 3.02
349 350 8.056407 ACTAAAAATAGTCCCTTGAATTCAGC 57.944 34.615 8.41 0.00 0.00 4.26
350 351 6.916360 AAAAATAGTCCCTTGAATTCAGCA 57.084 33.333 8.41 0.00 0.00 4.41
351 352 7.486407 AAAAATAGTCCCTTGAATTCAGCAT 57.514 32.000 8.41 0.00 0.00 3.79
352 353 6.461110 AAATAGTCCCTTGAATTCAGCATG 57.539 37.500 8.41 1.16 37.54 4.06
353 354 2.097825 AGTCCCTTGAATTCAGCATGC 58.902 47.619 10.51 10.51 34.76 4.06
354 355 1.135721 GTCCCTTGAATTCAGCATGCC 59.864 52.381 15.66 0.00 34.76 4.40
355 356 0.462789 CCCTTGAATTCAGCATGCCC 59.537 55.000 15.66 0.00 34.76 5.36
356 357 0.462789 CCTTGAATTCAGCATGCCCC 59.537 55.000 15.66 0.00 34.76 5.80
357 358 0.462789 CTTGAATTCAGCATGCCCCC 59.537 55.000 15.66 0.00 34.76 5.40
358 359 1.321805 TTGAATTCAGCATGCCCCCG 61.322 55.000 15.66 0.36 34.76 5.73
359 360 1.453745 GAATTCAGCATGCCCCCGA 60.454 57.895 15.66 3.13 34.76 5.14
360 361 1.450531 GAATTCAGCATGCCCCCGAG 61.451 60.000 15.66 0.00 34.76 4.63
361 362 1.925285 AATTCAGCATGCCCCCGAGA 61.925 55.000 15.66 0.10 34.76 4.04
362 363 1.925285 ATTCAGCATGCCCCCGAGAA 61.925 55.000 15.66 9.60 34.76 2.87
363 364 2.819984 TTCAGCATGCCCCCGAGAAC 62.820 60.000 15.66 0.00 34.76 3.01
364 365 3.329889 AGCATGCCCCCGAGAACA 61.330 61.111 15.66 0.00 0.00 3.18
365 366 2.361104 GCATGCCCCCGAGAACAA 60.361 61.111 6.36 0.00 0.00 2.83
366 367 1.754234 GCATGCCCCCGAGAACAAT 60.754 57.895 6.36 0.00 0.00 2.71
367 368 1.322538 GCATGCCCCCGAGAACAATT 61.323 55.000 6.36 0.00 0.00 2.32
372 373 2.823154 TGCCCCCGAGAACAATTTTAAG 59.177 45.455 0.00 0.00 0.00 1.85
463 465 1.814527 GATACACCGCGTCCTCCTT 59.185 57.895 4.92 0.00 0.00 3.36
508 510 2.347490 CCACCCCTCACCGTCAAG 59.653 66.667 0.00 0.00 0.00 3.02
616 618 4.814294 CACGCCCTCCGCCTACAC 62.814 72.222 0.00 0.00 41.76 2.90
643 645 3.373846 CCCCTCCCCTCCCACCTA 61.374 72.222 0.00 0.00 0.00 3.08
692 694 2.286523 CGCCTCACCAACCCTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
742 744 1.920325 CAAGCTCCCCTCCCACTCA 60.920 63.158 0.00 0.00 0.00 3.41
750 752 0.549169 CCCTCCCACTCAAACCCCTA 60.549 60.000 0.00 0.00 0.00 3.53
751 753 0.618981 CCTCCCACTCAAACCCCTAC 59.381 60.000 0.00 0.00 0.00 3.18
752 754 0.249398 CTCCCACTCAAACCCCTACG 59.751 60.000 0.00 0.00 0.00 3.51
753 755 0.472352 TCCCACTCAAACCCCTACGT 60.472 55.000 0.00 0.00 0.00 3.57
754 756 0.036671 CCCACTCAAACCCCTACGTC 60.037 60.000 0.00 0.00 0.00 4.34
755 757 0.036671 CCACTCAAACCCCTACGTCC 60.037 60.000 0.00 0.00 0.00 4.79
756 758 0.974383 CACTCAAACCCCTACGTCCT 59.026 55.000 0.00 0.00 0.00 3.85
757 759 2.173519 CACTCAAACCCCTACGTCCTA 58.826 52.381 0.00 0.00 0.00 2.94
758 760 2.094338 CACTCAAACCCCTACGTCCTAC 60.094 54.545 0.00 0.00 0.00 3.18
759 761 1.479730 CTCAAACCCCTACGTCCTACC 59.520 57.143 0.00 0.00 0.00 3.18
760 762 0.174162 CAAACCCCTACGTCCTACCG 59.826 60.000 0.00 0.00 0.00 4.02
761 763 0.039618 AAACCCCTACGTCCTACCGA 59.960 55.000 0.00 0.00 0.00 4.69
762 764 0.039618 AACCCCTACGTCCTACCGAA 59.960 55.000 0.00 0.00 0.00 4.30
763 765 0.039618 ACCCCTACGTCCTACCGAAA 59.960 55.000 0.00 0.00 0.00 3.46
764 766 1.185315 CCCCTACGTCCTACCGAAAA 58.815 55.000 0.00 0.00 0.00 2.29
765 767 1.550072 CCCCTACGTCCTACCGAAAAA 59.450 52.381 0.00 0.00 0.00 1.94
766 768 2.417787 CCCCTACGTCCTACCGAAAAAG 60.418 54.545 0.00 0.00 0.00 2.27
767 769 2.417787 CCCTACGTCCTACCGAAAAAGG 60.418 54.545 0.00 0.00 37.30 3.11
768 770 2.265683 CTACGTCCTACCGAAAAAGGC 58.734 52.381 0.00 0.00 32.55 4.35
769 771 0.683412 ACGTCCTACCGAAAAAGGCT 59.317 50.000 0.00 0.00 32.55 4.58
770 772 1.337541 ACGTCCTACCGAAAAAGGCTC 60.338 52.381 0.00 0.00 32.55 4.70
771 773 1.337447 CGTCCTACCGAAAAAGGCTCA 60.337 52.381 0.00 0.00 32.55 4.26
772 774 2.074576 GTCCTACCGAAAAAGGCTCAC 58.925 52.381 0.00 0.00 32.55 3.51
773 775 1.076332 CCTACCGAAAAAGGCTCACG 58.924 55.000 0.00 0.00 33.69 4.35
774 776 0.442699 CTACCGAAAAAGGCTCACGC 59.557 55.000 0.00 0.00 33.69 5.34
784 786 2.513897 GCTCACGCCCCGCTTTAT 60.514 61.111 0.00 0.00 0.00 1.40
785 787 1.227438 GCTCACGCCCCGCTTTATA 60.227 57.895 0.00 0.00 0.00 0.98
786 788 1.222115 GCTCACGCCCCGCTTTATAG 61.222 60.000 0.00 0.00 0.00 1.31
787 789 0.387929 CTCACGCCCCGCTTTATAGA 59.612 55.000 0.00 0.00 0.00 1.98
788 790 1.000955 CTCACGCCCCGCTTTATAGAT 59.999 52.381 0.00 0.00 0.00 1.98
789 791 2.230508 CTCACGCCCCGCTTTATAGATA 59.769 50.000 0.00 0.00 0.00 1.98
790 792 2.629137 TCACGCCCCGCTTTATAGATAA 59.371 45.455 0.00 0.00 0.00 1.75
791 793 3.069872 TCACGCCCCGCTTTATAGATAAA 59.930 43.478 0.00 0.00 0.00 1.40
804 806 8.807667 CTTTATAGATAAAGCCAATGCCAAAG 57.192 34.615 8.66 0.00 41.69 2.77
805 807 3.531934 AGATAAAGCCAATGCCAAAGC 57.468 42.857 0.00 0.00 38.69 3.51
806 808 2.169144 AGATAAAGCCAATGCCAAAGCC 59.831 45.455 0.00 0.00 38.69 4.35
807 809 1.346062 TAAAGCCAATGCCAAAGCCA 58.654 45.000 0.00 0.00 38.69 4.75
808 810 0.473326 AAAGCCAATGCCAAAGCCAA 59.527 45.000 0.00 0.00 38.69 4.52
809 811 0.250424 AAGCCAATGCCAAAGCCAAC 60.250 50.000 0.00 0.00 38.69 3.77
810 812 1.071128 GCCAATGCCAAAGCCAACA 59.929 52.632 0.00 0.00 38.69 3.33
811 813 0.321830 GCCAATGCCAAAGCCAACAT 60.322 50.000 0.00 0.00 38.69 2.71
812 814 1.729284 CCAATGCCAAAGCCAACATC 58.271 50.000 0.00 0.00 38.69 3.06
813 815 1.676615 CCAATGCCAAAGCCAACATCC 60.677 52.381 0.00 0.00 38.69 3.51
814 816 1.002201 CAATGCCAAAGCCAACATCCA 59.998 47.619 0.00 0.00 38.69 3.41
815 817 0.609662 ATGCCAAAGCCAACATCCAC 59.390 50.000 0.00 0.00 38.69 4.02
816 818 0.758310 TGCCAAAGCCAACATCCACA 60.758 50.000 0.00 0.00 38.69 4.17
817 819 0.392336 GCCAAAGCCAACATCCACAA 59.608 50.000 0.00 0.00 0.00 3.33
818 820 1.606224 GCCAAAGCCAACATCCACAAG 60.606 52.381 0.00 0.00 0.00 3.16
819 821 1.001181 CCAAAGCCAACATCCACAAGG 59.999 52.381 0.00 0.00 0.00 3.61
820 822 1.688197 CAAAGCCAACATCCACAAGGT 59.312 47.619 0.00 0.00 35.89 3.50
821 823 2.086610 AAGCCAACATCCACAAGGTT 57.913 45.000 0.00 0.00 35.89 3.50
822 824 1.620822 AGCCAACATCCACAAGGTTC 58.379 50.000 0.00 0.00 35.89 3.62
823 825 1.133513 AGCCAACATCCACAAGGTTCA 60.134 47.619 0.00 0.00 35.89 3.18
824 826 1.000274 GCCAACATCCACAAGGTTCAC 60.000 52.381 0.00 0.00 35.89 3.18
825 827 2.305928 CCAACATCCACAAGGTTCACA 58.694 47.619 0.00 0.00 35.89 3.58
826 828 2.034558 CCAACATCCACAAGGTTCACAC 59.965 50.000 0.00 0.00 35.89 3.82
827 829 1.981256 ACATCCACAAGGTTCACACC 58.019 50.000 0.00 0.00 44.67 4.16
844 846 3.183130 CCACCAAGGTTCACACACA 57.817 52.632 0.00 0.00 0.00 3.72
845 847 0.738389 CCACCAAGGTTCACACACAC 59.262 55.000 0.00 0.00 0.00 3.82
846 848 1.458398 CACCAAGGTTCACACACACA 58.542 50.000 0.00 0.00 0.00 3.72
847 849 1.132262 CACCAAGGTTCACACACACAC 59.868 52.381 0.00 0.00 0.00 3.82
848 850 1.271652 ACCAAGGTTCACACACACACA 60.272 47.619 0.00 0.00 0.00 3.72
849 851 2.023673 CCAAGGTTCACACACACACAT 58.976 47.619 0.00 0.00 0.00 3.21
850 852 3.210227 CCAAGGTTCACACACACACATA 58.790 45.455 0.00 0.00 0.00 2.29
851 853 3.250762 CCAAGGTTCACACACACACATAG 59.749 47.826 0.00 0.00 0.00 2.23
852 854 3.838244 AGGTTCACACACACACATAGT 57.162 42.857 0.00 0.00 0.00 2.12
853 855 3.728845 AGGTTCACACACACACATAGTC 58.271 45.455 0.00 0.00 0.00 2.59
854 856 2.806244 GGTTCACACACACACATAGTCC 59.194 50.000 0.00 0.00 0.00 3.85
855 857 3.462982 GTTCACACACACACATAGTCCA 58.537 45.455 0.00 0.00 0.00 4.02
856 858 3.385193 TCACACACACACATAGTCCAG 57.615 47.619 0.00 0.00 0.00 3.86
857 859 2.037121 TCACACACACACATAGTCCAGG 59.963 50.000 0.00 0.00 0.00 4.45
858 860 2.037121 CACACACACACATAGTCCAGGA 59.963 50.000 0.00 0.00 0.00 3.86
859 861 2.703536 ACACACACACATAGTCCAGGAA 59.296 45.455 0.00 0.00 0.00 3.36
860 862 3.067106 CACACACACATAGTCCAGGAAC 58.933 50.000 0.00 0.00 0.00 3.62
861 863 2.703536 ACACACACATAGTCCAGGAACA 59.296 45.455 0.00 0.00 0.00 3.18
862 864 3.135712 ACACACACATAGTCCAGGAACAA 59.864 43.478 0.00 0.00 0.00 2.83
863 865 4.133820 CACACACATAGTCCAGGAACAAA 58.866 43.478 0.00 0.00 0.00 2.83
864 866 4.024048 CACACACATAGTCCAGGAACAAAC 60.024 45.833 0.00 0.00 0.00 2.93
865 867 4.133820 CACACATAGTCCAGGAACAAACA 58.866 43.478 0.00 0.00 0.00 2.83
866 868 4.578516 CACACATAGTCCAGGAACAAACAA 59.421 41.667 0.00 0.00 0.00 2.83
867 869 4.821805 ACACATAGTCCAGGAACAAACAAG 59.178 41.667 0.00 0.00 0.00 3.16
868 870 3.821033 ACATAGTCCAGGAACAAACAAGC 59.179 43.478 0.00 0.00 0.00 4.01
869 871 2.435372 AGTCCAGGAACAAACAAGCA 57.565 45.000 0.00 0.00 0.00 3.91
870 872 2.949447 AGTCCAGGAACAAACAAGCAT 58.051 42.857 0.00 0.00 0.00 3.79
871 873 2.887152 AGTCCAGGAACAAACAAGCATC 59.113 45.455 0.00 0.00 0.00 3.91
872 874 2.622942 GTCCAGGAACAAACAAGCATCA 59.377 45.455 0.00 0.00 0.00 3.07
873 875 3.068024 GTCCAGGAACAAACAAGCATCAA 59.932 43.478 0.00 0.00 0.00 2.57
874 876 3.318839 TCCAGGAACAAACAAGCATCAAG 59.681 43.478 0.00 0.00 0.00 3.02
875 877 3.553508 CCAGGAACAAACAAGCATCAAGG 60.554 47.826 0.00 0.00 0.00 3.61
876 878 2.629617 AGGAACAAACAAGCATCAAGGG 59.370 45.455 0.00 0.00 0.00 3.95
877 879 2.365293 GGAACAAACAAGCATCAAGGGT 59.635 45.455 0.00 0.00 0.00 4.34
878 880 3.181466 GGAACAAACAAGCATCAAGGGTT 60.181 43.478 0.00 0.00 0.00 4.11
879 881 4.038642 GGAACAAACAAGCATCAAGGGTTA 59.961 41.667 0.00 0.00 0.00 2.85
880 882 4.853924 ACAAACAAGCATCAAGGGTTAG 57.146 40.909 0.00 0.00 0.00 2.34
881 883 4.215109 ACAAACAAGCATCAAGGGTTAGT 58.785 39.130 0.00 0.00 0.00 2.24
882 884 4.037923 ACAAACAAGCATCAAGGGTTAGTG 59.962 41.667 0.00 0.00 0.00 2.74
883 885 2.162681 ACAAGCATCAAGGGTTAGTGC 58.837 47.619 0.00 0.00 36.11 4.40
885 887 2.119801 AGCATCAAGGGTTAGTGCTG 57.880 50.000 0.00 0.00 43.84 4.41
886 888 1.630369 AGCATCAAGGGTTAGTGCTGA 59.370 47.619 0.00 0.00 43.84 4.26
887 889 2.012673 GCATCAAGGGTTAGTGCTGAG 58.987 52.381 0.00 0.00 33.25 3.35
888 890 2.636830 CATCAAGGGTTAGTGCTGAGG 58.363 52.381 0.00 0.00 0.00 3.86
889 891 0.984230 TCAAGGGTTAGTGCTGAGGG 59.016 55.000 0.00 0.00 0.00 4.30
890 892 0.678048 CAAGGGTTAGTGCTGAGGGC 60.678 60.000 0.00 0.00 42.22 5.19
900 902 3.978272 CTGAGGGCACAGCTCAAC 58.022 61.111 0.00 0.00 0.00 3.18
901 903 1.071987 CTGAGGGCACAGCTCAACA 59.928 57.895 0.00 0.00 0.00 3.33
902 904 0.535780 CTGAGGGCACAGCTCAACAA 60.536 55.000 0.00 0.00 0.00 2.83
903 905 0.535780 TGAGGGCACAGCTCAACAAG 60.536 55.000 0.00 0.00 0.00 3.16
912 914 2.114638 GCTCAACAAGCCCAACACA 58.885 52.632 0.00 0.00 45.92 3.72
913 915 0.249031 GCTCAACAAGCCCAACACAC 60.249 55.000 0.00 0.00 45.92 3.82
914 916 1.102154 CTCAACAAGCCCAACACACA 58.898 50.000 0.00 0.00 0.00 3.72
915 917 0.814457 TCAACAAGCCCAACACACAC 59.186 50.000 0.00 0.00 0.00 3.82
916 918 0.529833 CAACAAGCCCAACACACACA 59.470 50.000 0.00 0.00 0.00 3.72
917 919 0.530288 AACAAGCCCAACACACACAC 59.470 50.000 0.00 0.00 0.00 3.82
918 920 0.610509 ACAAGCCCAACACACACACA 60.611 50.000 0.00 0.00 0.00 3.72
919 921 0.529833 CAAGCCCAACACACACACAA 59.470 50.000 0.00 0.00 0.00 3.33
920 922 1.067283 CAAGCCCAACACACACACAAA 60.067 47.619 0.00 0.00 0.00 2.83
925 927 1.181786 CAACACACACACAAACCCCT 58.818 50.000 0.00 0.00 0.00 4.79
1184 1186 2.155197 GATTTGGGCACTGGGGAGGT 62.155 60.000 0.00 0.00 0.00 3.85
1276 1278 1.738099 GTCAAGTGCGGCGAGATGT 60.738 57.895 12.98 0.00 0.00 3.06
1278 1280 1.737735 CAAGTGCGGCGAGATGTCA 60.738 57.895 12.98 0.00 0.00 3.58
1302 1304 1.961793 CAAGGGAGGTGTTCGACAAA 58.038 50.000 0.00 0.00 0.00 2.83
1441 1443 1.985460 TTGCTACACGGTGGTTGGGT 61.985 55.000 13.48 0.00 0.00 4.51
1712 1717 1.406614 CCAGATGGAGAAGTCAGGCAC 60.407 57.143 0.00 0.00 37.39 5.01
2118 2123 3.252974 AGATCGGACATGAAGGTGAAC 57.747 47.619 0.00 0.00 0.00 3.18
2435 3616 1.227263 GCACCGACTGTCACACTGT 60.227 57.895 8.73 0.00 32.79 3.55
2656 3837 4.141620 TGAAAGACAAGAGCTTCAGGACTT 60.142 41.667 0.00 0.00 0.00 3.01
2754 3935 7.680730 AGTAAATCATATGGCCTTTCTATCGT 58.319 34.615 3.32 0.00 0.00 3.73
2764 3945 5.123820 TGGCCTTTCTATCGTCAAAATCAAG 59.876 40.000 3.32 0.00 0.00 3.02
2784 3965 2.200092 AAGCCCCGGCCAAAGAAA 59.800 55.556 2.24 0.00 43.17 2.52
2843 4024 7.934855 AATTCATGGATGTATAGGCTTGATC 57.065 36.000 0.00 0.00 0.00 2.92
2860 4041 2.625314 TGATCGAGTGCCCTATCTGAAG 59.375 50.000 0.00 0.00 0.00 3.02
2969 4152 7.236019 TCTCTTTAGGTGTTAGGTTGATGGTTA 59.764 37.037 0.00 0.00 0.00 2.85
3023 4206 4.408904 ACCCTGTAGACCTTACCAGTTA 57.591 45.455 0.00 0.00 0.00 2.24
3038 4221 2.926200 CCAGTTACGTCTTCTGCATCAG 59.074 50.000 0.00 0.00 0.00 2.90
3058 4241 7.424803 CATCAGTGTTCTTCCACAAATTGTTA 58.575 34.615 0.00 0.00 37.82 2.41
3076 4259 6.811253 TTGTTACCATACACCATTGAGTTC 57.189 37.500 0.00 0.00 0.00 3.01
3182 4365 6.898041 TGCAATATTTCAACACAGTACTCAC 58.102 36.000 0.00 0.00 0.00 3.51
3202 4385 7.044181 ACTCACCACAGTTCATCTATACATTG 58.956 38.462 0.00 0.00 0.00 2.82
3261 5405 2.810439 CAAATTTTGCTTCCGACCCA 57.190 45.000 0.00 0.00 0.00 4.51
3282 5426 6.833933 ACCCATTCACTAAATTTACATCTCCC 59.166 38.462 0.00 0.00 0.00 4.30
3429 5573 7.593273 GTCTTATCAAGGTTATCAGATGTCTCG 59.407 40.741 0.00 0.00 0.00 4.04
3431 5575 4.998788 TCAAGGTTATCAGATGTCTCGTG 58.001 43.478 0.00 0.00 0.00 4.35
3438 5582 2.504367 TCAGATGTCTCGTGTCTCACA 58.496 47.619 1.00 0.00 33.40 3.58
3465 5609 3.444029 CTTCCTTTTCCAATCCCATGGT 58.556 45.455 11.73 0.00 41.46 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.399303 CCAAGCACCCTCTAAAAATAGTGG 59.601 45.833 0.00 0.00 0.00 4.00
2 3 5.514500 TCCAAGCACCCTCTAAAAATAGT 57.486 39.130 0.00 0.00 0.00 2.12
4 5 6.053005 CGTATCCAAGCACCCTCTAAAAATA 58.947 40.000 0.00 0.00 0.00 1.40
5 6 4.881850 CGTATCCAAGCACCCTCTAAAAAT 59.118 41.667 0.00 0.00 0.00 1.82
6 7 4.258543 CGTATCCAAGCACCCTCTAAAAA 58.741 43.478 0.00 0.00 0.00 1.94
7 8 3.262405 ACGTATCCAAGCACCCTCTAAAA 59.738 43.478 0.00 0.00 0.00 1.52
8 9 2.835764 ACGTATCCAAGCACCCTCTAAA 59.164 45.455 0.00 0.00 0.00 1.85
9 10 2.463752 ACGTATCCAAGCACCCTCTAA 58.536 47.619 0.00 0.00 0.00 2.10
10 11 2.154567 ACGTATCCAAGCACCCTCTA 57.845 50.000 0.00 0.00 0.00 2.43
11 12 1.276622 AACGTATCCAAGCACCCTCT 58.723 50.000 0.00 0.00 0.00 3.69
12 13 2.109425 AAACGTATCCAAGCACCCTC 57.891 50.000 0.00 0.00 0.00 4.30
13 14 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
14 15 3.340928 ACTAAAACGTATCCAAGCACCC 58.659 45.455 0.00 0.00 0.00 4.61
15 16 3.373130 GGACTAAAACGTATCCAAGCACC 59.627 47.826 0.00 0.00 0.00 5.01
16 17 4.251268 AGGACTAAAACGTATCCAAGCAC 58.749 43.478 0.00 0.00 33.33 4.40
17 18 4.546829 AGGACTAAAACGTATCCAAGCA 57.453 40.909 0.00 0.00 33.33 3.91
18 19 6.200475 GTCATAGGACTAAAACGTATCCAAGC 59.800 42.308 0.00 0.00 40.99 4.01
19 20 7.695869 GTCATAGGACTAAAACGTATCCAAG 57.304 40.000 0.00 0.00 40.99 3.61
34 35 6.380560 AGTCCCACTACTTTTAGTCATAGGAC 59.619 42.308 0.00 0.00 44.66 3.85
35 36 6.500336 AGTCCCACTACTTTTAGTCATAGGA 58.500 40.000 0.00 0.00 36.31 2.94
36 37 6.793505 AGTCCCACTACTTTTAGTCATAGG 57.206 41.667 0.00 0.00 36.31 2.57
38 39 9.933723 GTTTTAGTCCCACTACTTTTAGTCATA 57.066 33.333 0.00 0.00 36.31 2.15
39 40 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
40 41 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
41 42 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
42 43 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
43 44 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
44 45 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
45 46 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
46 47 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
47 48 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
48 49 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
49 50 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
50 51 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
51 52 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
52 53 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
53 54 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
54 55 3.010420 CAGGCTAGCAAGTTTTAGTCCC 58.990 50.000 18.24 0.00 0.00 4.46
55 56 3.685272 GTCAGGCTAGCAAGTTTTAGTCC 59.315 47.826 18.24 0.00 0.00 3.85
56 57 3.685272 GGTCAGGCTAGCAAGTTTTAGTC 59.315 47.826 18.24 0.00 0.00 2.59
57 58 3.559384 GGGTCAGGCTAGCAAGTTTTAGT 60.559 47.826 18.24 0.00 0.00 2.24
58 59 3.010420 GGGTCAGGCTAGCAAGTTTTAG 58.990 50.000 18.24 0.00 0.00 1.85
59 60 2.373836 TGGGTCAGGCTAGCAAGTTTTA 59.626 45.455 18.24 0.00 0.00 1.52
60 61 1.144913 TGGGTCAGGCTAGCAAGTTTT 59.855 47.619 18.24 0.00 0.00 2.43
61 62 0.771127 TGGGTCAGGCTAGCAAGTTT 59.229 50.000 18.24 0.00 0.00 2.66
62 63 0.995024 ATGGGTCAGGCTAGCAAGTT 59.005 50.000 18.24 0.00 0.00 2.66
63 64 0.254178 CATGGGTCAGGCTAGCAAGT 59.746 55.000 18.24 0.00 0.00 3.16
64 65 1.099879 GCATGGGTCAGGCTAGCAAG 61.100 60.000 18.24 8.24 38.19 4.01
65 66 1.077501 GCATGGGTCAGGCTAGCAA 60.078 57.895 18.24 0.00 38.19 3.91
66 67 2.591753 GCATGGGTCAGGCTAGCA 59.408 61.111 18.24 0.00 38.19 3.49
100 101 9.817809 TGCTCATTAACTCGATTTTAGTCTATT 57.182 29.630 0.00 0.00 0.00 1.73
101 102 9.988815 ATGCTCATTAACTCGATTTTAGTCTAT 57.011 29.630 0.00 0.00 0.00 1.98
102 103 9.817809 AATGCTCATTAACTCGATTTTAGTCTA 57.182 29.630 0.00 0.00 0.00 2.59
103 104 8.723942 AATGCTCATTAACTCGATTTTAGTCT 57.276 30.769 0.00 0.00 0.00 3.24
111 112 9.950496 AGGATAATAAATGCTCATTAACTCGAT 57.050 29.630 0.00 0.00 0.00 3.59
112 113 9.424319 GAGGATAATAAATGCTCATTAACTCGA 57.576 33.333 2.11 0.00 36.64 4.04
113 114 9.208022 TGAGGATAATAAATGCTCATTAACTCG 57.792 33.333 5.25 0.00 40.70 4.18
120 121 9.597681 AGGATTTTGAGGATAATAAATGCTCAT 57.402 29.630 9.56 0.00 44.05 2.90
121 122 9.071276 GAGGATTTTGAGGATAATAAATGCTCA 57.929 33.333 17.37 5.25 46.15 4.26
122 123 8.518702 GGAGGATTTTGAGGATAATAAATGCTC 58.481 37.037 15.23 15.23 46.15 4.26
123 124 8.006564 TGGAGGATTTTGAGGATAATAAATGCT 58.993 33.333 0.00 0.00 40.05 3.79
124 125 8.181904 TGGAGGATTTTGAGGATAATAAATGC 57.818 34.615 0.00 0.00 0.00 3.56
127 128 9.367160 GGATTGGAGGATTTTGAGGATAATAAA 57.633 33.333 0.00 0.00 0.00 1.40
128 129 8.510283 TGGATTGGAGGATTTTGAGGATAATAA 58.490 33.333 0.00 0.00 0.00 1.40
129 130 8.056088 TGGATTGGAGGATTTTGAGGATAATA 57.944 34.615 0.00 0.00 0.00 0.98
130 131 6.925934 TGGATTGGAGGATTTTGAGGATAAT 58.074 36.000 0.00 0.00 0.00 1.28
131 132 6.160282 TCTGGATTGGAGGATTTTGAGGATAA 59.840 38.462 0.00 0.00 0.00 1.75
132 133 5.671735 TCTGGATTGGAGGATTTTGAGGATA 59.328 40.000 0.00 0.00 0.00 2.59
133 134 4.479796 TCTGGATTGGAGGATTTTGAGGAT 59.520 41.667 0.00 0.00 0.00 3.24
134 135 3.851976 TCTGGATTGGAGGATTTTGAGGA 59.148 43.478 0.00 0.00 0.00 3.71
135 136 4.240881 TCTGGATTGGAGGATTTTGAGG 57.759 45.455 0.00 0.00 0.00 3.86
136 137 5.259632 AGTTCTGGATTGGAGGATTTTGAG 58.740 41.667 0.00 0.00 0.00 3.02
137 138 5.222109 TGAGTTCTGGATTGGAGGATTTTGA 60.222 40.000 0.00 0.00 0.00 2.69
138 139 5.012239 TGAGTTCTGGATTGGAGGATTTTG 58.988 41.667 0.00 0.00 0.00 2.44
139 140 5.012893 GTGAGTTCTGGATTGGAGGATTTT 58.987 41.667 0.00 0.00 0.00 1.82
140 141 4.593956 GTGAGTTCTGGATTGGAGGATTT 58.406 43.478 0.00 0.00 0.00 2.17
141 142 3.369892 CGTGAGTTCTGGATTGGAGGATT 60.370 47.826 0.00 0.00 0.00 3.01
142 143 2.169352 CGTGAGTTCTGGATTGGAGGAT 59.831 50.000 0.00 0.00 0.00 3.24
143 144 1.550524 CGTGAGTTCTGGATTGGAGGA 59.449 52.381 0.00 0.00 0.00 3.71
144 145 1.276421 ACGTGAGTTCTGGATTGGAGG 59.724 52.381 0.00 0.00 46.40 4.30
145 146 2.289072 ACACGTGAGTTCTGGATTGGAG 60.289 50.000 25.01 0.00 46.40 3.86
146 147 1.691976 ACACGTGAGTTCTGGATTGGA 59.308 47.619 25.01 0.00 46.40 3.53
147 148 1.800586 CACACGTGAGTTCTGGATTGG 59.199 52.381 25.01 0.00 46.40 3.16
148 149 2.483876 ACACACGTGAGTTCTGGATTG 58.516 47.619 25.01 8.27 46.40 2.67
149 150 2.910688 ACACACGTGAGTTCTGGATT 57.089 45.000 25.01 0.00 46.40 3.01
150 151 2.910688 AACACACGTGAGTTCTGGAT 57.089 45.000 25.01 0.65 46.40 3.41
151 152 3.804786 TTAACACACGTGAGTTCTGGA 57.195 42.857 30.22 13.71 46.40 3.86
152 153 4.116961 TCTTTAACACACGTGAGTTCTGG 58.883 43.478 30.22 20.78 46.40 3.86
153 154 5.518847 TCTTCTTTAACACACGTGAGTTCTG 59.481 40.000 30.22 21.16 46.40 3.02
154 155 5.657474 TCTTCTTTAACACACGTGAGTTCT 58.343 37.500 30.22 14.07 46.40 3.01
155 156 5.050972 CCTCTTCTTTAACACACGTGAGTTC 60.051 44.000 30.22 0.00 46.40 3.01
156 157 4.809426 CCTCTTCTTTAACACACGTGAGTT 59.191 41.667 29.45 29.45 46.40 3.01
158 159 4.617959 TCCTCTTCTTTAACACACGTGAG 58.382 43.478 25.01 18.00 0.00 3.51
159 160 4.098960 ACTCCTCTTCTTTAACACACGTGA 59.901 41.667 25.01 0.00 0.00 4.35
160 161 4.369182 ACTCCTCTTCTTTAACACACGTG 58.631 43.478 15.48 15.48 0.00 4.49
161 162 4.667519 ACTCCTCTTCTTTAACACACGT 57.332 40.909 0.00 0.00 0.00 4.49
162 163 7.473027 TTTAACTCCTCTTCTTTAACACACG 57.527 36.000 0.00 0.00 0.00 4.49
163 164 9.052759 TCATTTAACTCCTCTTCTTTAACACAC 57.947 33.333 0.00 0.00 0.00 3.82
164 165 9.273016 CTCATTTAACTCCTCTTCTTTAACACA 57.727 33.333 0.00 0.00 0.00 3.72
165 166 8.722394 CCTCATTTAACTCCTCTTCTTTAACAC 58.278 37.037 0.00 0.00 0.00 3.32
166 167 8.656806 TCCTCATTTAACTCCTCTTCTTTAACA 58.343 33.333 0.00 0.00 0.00 2.41
167 168 9.157104 CTCCTCATTTAACTCCTCTTCTTTAAC 57.843 37.037 0.00 0.00 0.00 2.01
168 169 9.101325 TCTCCTCATTTAACTCCTCTTCTTTAA 57.899 33.333 0.00 0.00 0.00 1.52
169 170 8.666129 TCTCCTCATTTAACTCCTCTTCTTTA 57.334 34.615 0.00 0.00 0.00 1.85
170 171 7.456269 TCTCTCCTCATTTAACTCCTCTTCTTT 59.544 37.037 0.00 0.00 0.00 2.52
171 172 6.957020 TCTCTCCTCATTTAACTCCTCTTCTT 59.043 38.462 0.00 0.00 0.00 2.52
172 173 6.498538 TCTCTCCTCATTTAACTCCTCTTCT 58.501 40.000 0.00 0.00 0.00 2.85
173 174 6.605594 TCTCTCTCCTCATTTAACTCCTCTTC 59.394 42.308 0.00 0.00 0.00 2.87
174 175 6.498538 TCTCTCTCCTCATTTAACTCCTCTT 58.501 40.000 0.00 0.00 0.00 2.85
175 176 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
176 177 5.301805 CCTCTCTCTCCTCATTTAACTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
177 178 5.043732 TCCTCTCTCTCCTCATTTAACTCCT 60.044 44.000 0.00 0.00 0.00 3.69
178 179 5.068591 GTCCTCTCTCTCCTCATTTAACTCC 59.931 48.000 0.00 0.00 0.00 3.85
179 180 5.891551 AGTCCTCTCTCTCCTCATTTAACTC 59.108 44.000 0.00 0.00 0.00 3.01
180 181 5.837829 AGTCCTCTCTCTCCTCATTTAACT 58.162 41.667 0.00 0.00 0.00 2.24
181 182 7.648039 TTAGTCCTCTCTCTCCTCATTTAAC 57.352 40.000 0.00 0.00 0.00 2.01
182 183 7.507616 GGATTAGTCCTCTCTCTCCTCATTTAA 59.492 40.741 0.00 0.00 41.60 1.52
183 184 7.007723 GGATTAGTCCTCTCTCTCCTCATTTA 58.992 42.308 0.00 0.00 41.60 1.40
184 185 5.838521 GGATTAGTCCTCTCTCTCCTCATTT 59.161 44.000 0.00 0.00 41.60 2.32
185 186 5.103301 TGGATTAGTCCTCTCTCTCCTCATT 60.103 44.000 5.79 0.00 45.32 2.57
186 187 4.418526 TGGATTAGTCCTCTCTCTCCTCAT 59.581 45.833 5.79 0.00 45.32 2.90
187 188 3.788708 TGGATTAGTCCTCTCTCTCCTCA 59.211 47.826 5.79 0.00 45.32 3.86
188 189 4.142038 GTGGATTAGTCCTCTCTCTCCTC 58.858 52.174 5.79 0.00 45.32 3.71
189 190 3.529734 TGTGGATTAGTCCTCTCTCTCCT 59.470 47.826 5.79 0.00 45.32 3.69
190 191 3.904717 TGTGGATTAGTCCTCTCTCTCC 58.095 50.000 5.79 0.00 45.32 3.71
191 192 6.478512 AAATGTGGATTAGTCCTCTCTCTC 57.521 41.667 5.79 0.00 45.32 3.20
192 193 6.882768 AAAATGTGGATTAGTCCTCTCTCT 57.117 37.500 5.79 0.00 45.32 3.10
193 194 7.787028 ACTAAAATGTGGATTAGTCCTCTCTC 58.213 38.462 5.79 0.00 45.32 3.20
194 195 7.741554 ACTAAAATGTGGATTAGTCCTCTCT 57.258 36.000 5.79 0.00 45.32 3.10
195 196 8.145122 CCTACTAAAATGTGGATTAGTCCTCTC 58.855 40.741 5.79 0.00 45.32 3.20
196 197 7.844779 TCCTACTAAAATGTGGATTAGTCCTCT 59.155 37.037 5.79 0.00 45.32 3.69
197 198 8.019656 TCCTACTAAAATGTGGATTAGTCCTC 57.980 38.462 5.79 2.58 45.32 3.71
198 199 7.989947 TCCTACTAAAATGTGGATTAGTCCT 57.010 36.000 5.79 0.00 45.32 3.85
199 200 9.628500 AAATCCTACTAAAATGTGGATTAGTCC 57.372 33.333 6.06 0.00 44.02 3.85
201 202 9.628500 GGAAATCCTACTAAAATGTGGATTAGT 57.372 33.333 6.06 3.93 44.02 2.24
202 203 9.067986 GGGAAATCCTACTAAAATGTGGATTAG 57.932 37.037 6.06 0.00 44.02 1.73
203 204 8.787818 AGGGAAATCCTACTAAAATGTGGATTA 58.212 33.333 6.06 0.00 45.98 1.75
204 205 7.561356 CAGGGAAATCCTACTAAAATGTGGATT 59.439 37.037 0.00 0.00 46.12 3.01
205 206 7.062957 CAGGGAAATCCTACTAAAATGTGGAT 58.937 38.462 0.00 0.00 46.12 3.41
206 207 6.216662 TCAGGGAAATCCTACTAAAATGTGGA 59.783 38.462 0.00 0.00 46.12 4.02
207 208 6.318900 GTCAGGGAAATCCTACTAAAATGTGG 59.681 42.308 0.00 0.00 46.12 4.17
208 209 7.112779 AGTCAGGGAAATCCTACTAAAATGTG 58.887 38.462 0.00 0.00 46.12 3.21
209 210 7.272144 AGTCAGGGAAATCCTACTAAAATGT 57.728 36.000 0.00 0.00 46.12 2.71
210 211 9.681062 TTTAGTCAGGGAAATCCTACTAAAATG 57.319 33.333 20.44 4.09 46.12 2.32
252 253 6.824704 TGACTAAAGAGAGGCTAGAACTAGTC 59.175 42.308 14.17 14.17 38.03 2.59
253 254 6.723339 TGACTAAAGAGAGGCTAGAACTAGT 58.277 40.000 10.03 0.00 35.65 2.57
254 255 6.262273 CCTGACTAAAGAGAGGCTAGAACTAG 59.738 46.154 0.00 4.67 36.29 2.57
255 256 6.069556 TCCTGACTAAAGAGAGGCTAGAACTA 60.070 42.308 0.00 0.00 0.00 2.24
256 257 4.953579 CCTGACTAAAGAGAGGCTAGAACT 59.046 45.833 0.00 0.00 0.00 3.01
257 258 4.951094 TCCTGACTAAAGAGAGGCTAGAAC 59.049 45.833 0.00 0.00 0.00 3.01
258 259 5.194473 TCCTGACTAAAGAGAGGCTAGAA 57.806 43.478 0.00 0.00 0.00 2.10
259 260 4.864483 TCCTGACTAAAGAGAGGCTAGA 57.136 45.455 0.00 0.00 0.00 2.43
260 261 5.596361 TCATTCCTGACTAAAGAGAGGCTAG 59.404 44.000 0.00 0.00 0.00 3.42
261 262 5.519808 TCATTCCTGACTAAAGAGAGGCTA 58.480 41.667 0.00 0.00 0.00 3.93
262 263 4.357325 TCATTCCTGACTAAAGAGAGGCT 58.643 43.478 0.00 0.00 0.00 4.58
263 264 4.744795 TCATTCCTGACTAAAGAGAGGC 57.255 45.455 0.00 0.00 0.00 4.70
264 265 6.054295 CCAATCATTCCTGACTAAAGAGAGG 58.946 44.000 0.00 0.00 33.22 3.69
265 266 6.882656 TCCAATCATTCCTGACTAAAGAGAG 58.117 40.000 0.00 0.00 33.22 3.20
266 267 6.874278 TCCAATCATTCCTGACTAAAGAGA 57.126 37.500 0.00 0.00 33.22 3.10
267 268 7.108847 AGTTCCAATCATTCCTGACTAAAGAG 58.891 38.462 0.00 0.00 33.22 2.85
268 269 7.020827 AGTTCCAATCATTCCTGACTAAAGA 57.979 36.000 0.00 0.00 33.22 2.52
269 270 7.693969 AAGTTCCAATCATTCCTGACTAAAG 57.306 36.000 0.00 0.00 33.22 1.85
270 271 9.231297 CTAAAGTTCCAATCATTCCTGACTAAA 57.769 33.333 0.00 0.00 33.22 1.85
271 272 7.336931 GCTAAAGTTCCAATCATTCCTGACTAA 59.663 37.037 0.00 0.00 33.22 2.24
272 273 6.823689 GCTAAAGTTCCAATCATTCCTGACTA 59.176 38.462 0.00 0.00 33.22 2.59
273 274 5.649831 GCTAAAGTTCCAATCATTCCTGACT 59.350 40.000 0.00 0.00 33.22 3.41
274 275 5.163612 GGCTAAAGTTCCAATCATTCCTGAC 60.164 44.000 0.00 0.00 33.22 3.51
275 276 4.949856 GGCTAAAGTTCCAATCATTCCTGA 59.050 41.667 0.00 0.00 35.41 3.86
276 277 4.952335 AGGCTAAAGTTCCAATCATTCCTG 59.048 41.667 0.00 0.00 0.00 3.86
277 278 5.044550 AGAGGCTAAAGTTCCAATCATTCCT 60.045 40.000 0.00 0.00 0.00 3.36
278 279 5.196695 AGAGGCTAAAGTTCCAATCATTCC 58.803 41.667 0.00 0.00 0.00 3.01
279 280 7.865706 TTAGAGGCTAAAGTTCCAATCATTC 57.134 36.000 0.00 0.00 0.00 2.67
280 281 8.650143 TTTTAGAGGCTAAAGTTCCAATCATT 57.350 30.769 0.00 0.00 0.00 2.57
281 282 8.109634 TCTTTTAGAGGCTAAAGTTCCAATCAT 58.890 33.333 7.84 0.00 33.97 2.45
282 283 7.458397 TCTTTTAGAGGCTAAAGTTCCAATCA 58.542 34.615 7.84 0.00 33.97 2.57
283 284 7.824779 TCTCTTTTAGAGGCTAAAGTTCCAATC 59.175 37.037 7.84 0.00 42.54 2.67
284 285 7.608376 GTCTCTTTTAGAGGCTAAAGTTCCAAT 59.392 37.037 7.84 0.00 43.38 3.16
285 286 6.935208 GTCTCTTTTAGAGGCTAAAGTTCCAA 59.065 38.462 7.84 0.00 43.38 3.53
286 287 6.465084 GTCTCTTTTAGAGGCTAAAGTTCCA 58.535 40.000 7.84 0.00 43.38 3.53
287 288 6.971527 GTCTCTTTTAGAGGCTAAAGTTCC 57.028 41.667 7.84 0.00 43.38 3.62
296 297 8.305317 TGACTAAAACTAGTCTCTTTTAGAGGC 58.695 37.037 22.75 14.89 46.94 4.70
297 298 9.849166 CTGACTAAAACTAGTCTCTTTTAGAGG 57.151 37.037 22.75 12.64 44.99 3.69
315 316 9.720769 CAAGGGACTATTTTTAGTCTGACTAAA 57.279 33.333 29.65 29.65 42.90 1.85
316 317 9.096823 TCAAGGGACTATTTTTAGTCTGACTAA 57.903 33.333 22.80 22.80 44.35 2.24
317 318 8.660295 TCAAGGGACTATTTTTAGTCTGACTA 57.340 34.615 13.34 13.34 44.35 2.59
318 319 7.554959 TCAAGGGACTATTTTTAGTCTGACT 57.445 36.000 15.57 15.57 44.35 3.41
319 320 8.794335 ATTCAAGGGACTATTTTTAGTCTGAC 57.206 34.615 11.69 0.00 44.35 3.51
320 321 9.449719 GAATTCAAGGGACTATTTTTAGTCTGA 57.550 33.333 11.69 6.38 44.35 3.27
321 322 9.231297 TGAATTCAAGGGACTATTTTTAGTCTG 57.769 33.333 5.45 4.52 44.35 3.51
322 323 9.454859 CTGAATTCAAGGGACTATTTTTAGTCT 57.545 33.333 9.88 0.00 44.35 3.24
323 324 8.184848 GCTGAATTCAAGGGACTATTTTTAGTC 58.815 37.037 9.88 4.87 44.23 2.59
324 325 7.669722 TGCTGAATTCAAGGGACTATTTTTAGT 59.330 33.333 9.88 0.00 38.49 2.24
325 326 8.055279 TGCTGAATTCAAGGGACTATTTTTAG 57.945 34.615 9.88 0.00 38.49 1.85
326 327 8.469200 CATGCTGAATTCAAGGGACTATTTTTA 58.531 33.333 9.88 0.00 38.49 1.52
327 328 6.916360 TGCTGAATTCAAGGGACTATTTTT 57.084 33.333 9.88 0.00 38.49 1.94
328 329 6.628844 GCATGCTGAATTCAAGGGACTATTTT 60.629 38.462 11.37 0.00 38.49 1.82
329 330 5.163478 GCATGCTGAATTCAAGGGACTATTT 60.163 40.000 11.37 0.00 38.49 1.40
330 331 4.340381 GCATGCTGAATTCAAGGGACTATT 59.660 41.667 11.37 0.00 38.49 1.73
331 332 3.887716 GCATGCTGAATTCAAGGGACTAT 59.112 43.478 11.37 0.00 38.49 2.12
332 333 3.282021 GCATGCTGAATTCAAGGGACTA 58.718 45.455 11.37 0.00 38.49 2.59
334 335 1.135721 GGCATGCTGAATTCAAGGGAC 59.864 52.381 18.92 0.00 0.00 4.46
335 336 1.477553 GGCATGCTGAATTCAAGGGA 58.522 50.000 18.92 0.18 0.00 4.20
336 337 0.462789 GGGCATGCTGAATTCAAGGG 59.537 55.000 18.92 0.00 0.00 3.95
337 338 0.462789 GGGGCATGCTGAATTCAAGG 59.537 55.000 18.92 0.00 0.00 3.61
338 339 0.462789 GGGGGCATGCTGAATTCAAG 59.537 55.000 18.92 5.19 0.00 3.02
339 340 1.321805 CGGGGGCATGCTGAATTCAA 61.322 55.000 18.92 0.00 0.00 2.69
340 341 1.753848 CGGGGGCATGCTGAATTCA 60.754 57.895 18.92 8.12 0.00 2.57
341 342 1.450531 CTCGGGGGCATGCTGAATTC 61.451 60.000 18.92 0.00 0.00 2.17
342 343 1.454479 CTCGGGGGCATGCTGAATT 60.454 57.895 18.92 0.00 0.00 2.17
343 344 1.925285 TTCTCGGGGGCATGCTGAAT 61.925 55.000 18.92 0.00 0.00 2.57
344 345 2.601702 TTCTCGGGGGCATGCTGAA 61.602 57.895 18.92 9.61 0.00 3.02
345 346 3.008517 TTCTCGGGGGCATGCTGA 61.009 61.111 18.92 9.68 0.00 4.26
346 347 2.825836 GTTCTCGGGGGCATGCTG 60.826 66.667 18.92 5.56 0.00 4.41
347 348 2.215451 ATTGTTCTCGGGGGCATGCT 62.215 55.000 18.92 0.00 0.00 3.79
348 349 1.322538 AATTGTTCTCGGGGGCATGC 61.323 55.000 9.90 9.90 0.00 4.06
349 350 1.185315 AAATTGTTCTCGGGGGCATG 58.815 50.000 0.00 0.00 0.00 4.06
350 351 1.937191 AAAATTGTTCTCGGGGGCAT 58.063 45.000 0.00 0.00 0.00 4.40
351 352 2.588464 TAAAATTGTTCTCGGGGGCA 57.412 45.000 0.00 0.00 0.00 5.36
352 353 2.823747 ACTTAAAATTGTTCTCGGGGGC 59.176 45.455 0.00 0.00 0.00 5.80
353 354 3.442625 GGACTTAAAATTGTTCTCGGGGG 59.557 47.826 0.00 0.00 0.00 5.40
354 355 3.126343 CGGACTTAAAATTGTTCTCGGGG 59.874 47.826 0.00 0.00 0.00 5.73
355 356 3.749609 ACGGACTTAAAATTGTTCTCGGG 59.250 43.478 0.00 0.00 0.00 5.14
356 357 5.406175 TGTACGGACTTAAAATTGTTCTCGG 59.594 40.000 0.00 0.00 0.00 4.63
357 358 6.456447 TGTACGGACTTAAAATTGTTCTCG 57.544 37.500 0.00 0.00 0.00 4.04
358 359 9.166126 CTTTTGTACGGACTTAAAATTGTTCTC 57.834 33.333 0.00 0.00 0.00 2.87
359 360 7.646526 GCTTTTGTACGGACTTAAAATTGTTCT 59.353 33.333 0.00 0.00 0.00 3.01
360 361 7.432838 TGCTTTTGTACGGACTTAAAATTGTTC 59.567 33.333 0.00 0.00 0.00 3.18
361 362 7.259161 TGCTTTTGTACGGACTTAAAATTGTT 58.741 30.769 0.00 0.00 0.00 2.83
362 363 6.797454 TGCTTTTGTACGGACTTAAAATTGT 58.203 32.000 0.00 0.00 0.00 2.71
363 364 6.915843 ACTGCTTTTGTACGGACTTAAAATTG 59.084 34.615 0.00 0.00 0.00 2.32
364 365 7.034685 ACTGCTTTTGTACGGACTTAAAATT 57.965 32.000 0.00 0.00 0.00 1.82
365 366 6.293790 GGACTGCTTTTGTACGGACTTAAAAT 60.294 38.462 0.00 0.00 0.00 1.82
366 367 5.007921 GGACTGCTTTTGTACGGACTTAAAA 59.992 40.000 0.00 0.00 0.00 1.52
367 368 4.512571 GGACTGCTTTTGTACGGACTTAAA 59.487 41.667 0.00 0.00 0.00 1.52
372 373 1.154197 GGGACTGCTTTTGTACGGAC 58.846 55.000 0.00 0.00 0.00 4.79
463 465 3.385384 CTGGAGCTGACGCCCTGA 61.385 66.667 0.00 0.00 34.24 3.86
616 618 2.040359 GGGAGGGGAAGGAGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
643 645 4.684134 AGGGCGCATGGCAAGGTT 62.684 61.111 10.83 0.00 46.16 3.50
670 672 3.961414 GGGTTGGTGAGGCGGGAA 61.961 66.667 0.00 0.00 0.00 3.97
680 682 1.977544 CGACGGAGAGAGGGTTGGT 60.978 63.158 0.00 0.00 0.00 3.67
742 744 0.039618 TCGGTAGGACGTAGGGGTTT 59.960 55.000 0.00 0.00 34.94 3.27
750 752 0.683412 AGCCTTTTTCGGTAGGACGT 59.317 50.000 0.00 0.00 33.13 4.34
751 753 1.337447 TGAGCCTTTTTCGGTAGGACG 60.337 52.381 0.00 0.00 33.13 4.79
752 754 2.074576 GTGAGCCTTTTTCGGTAGGAC 58.925 52.381 0.00 0.00 33.13 3.85
753 755 1.337447 CGTGAGCCTTTTTCGGTAGGA 60.337 52.381 0.00 0.00 33.13 2.94
754 756 1.076332 CGTGAGCCTTTTTCGGTAGG 58.924 55.000 0.00 0.00 34.54 3.18
768 770 0.387929 TCTATAAAGCGGGGCGTGAG 59.612 55.000 0.00 0.00 0.00 3.51
769 771 1.045407 ATCTATAAAGCGGGGCGTGA 58.955 50.000 0.00 0.00 0.00 4.35
770 772 2.736144 TATCTATAAAGCGGGGCGTG 57.264 50.000 0.00 0.00 0.00 5.34
771 773 3.660865 CTTTATCTATAAAGCGGGGCGT 58.339 45.455 9.01 0.00 41.69 5.68
779 781 7.383300 GCTTTGGCATTGGCTTTATCTATAAAG 59.617 37.037 15.20 15.20 43.18 1.85
780 782 7.209475 GCTTTGGCATTGGCTTTATCTATAAA 58.791 34.615 11.84 0.00 40.87 1.40
781 783 6.239289 GGCTTTGGCATTGGCTTTATCTATAA 60.239 38.462 11.84 0.00 40.87 0.98
782 784 5.243730 GGCTTTGGCATTGGCTTTATCTATA 59.756 40.000 11.84 0.00 40.87 1.31
783 785 4.039609 GGCTTTGGCATTGGCTTTATCTAT 59.960 41.667 11.84 0.00 40.87 1.98
784 786 3.384467 GGCTTTGGCATTGGCTTTATCTA 59.616 43.478 11.84 0.00 40.87 1.98
785 787 2.169144 GGCTTTGGCATTGGCTTTATCT 59.831 45.455 11.84 0.00 40.87 1.98
786 788 2.093553 TGGCTTTGGCATTGGCTTTATC 60.094 45.455 11.84 0.01 40.87 1.75
787 789 1.907936 TGGCTTTGGCATTGGCTTTAT 59.092 42.857 11.84 0.00 40.87 1.40
788 790 1.346062 TGGCTTTGGCATTGGCTTTA 58.654 45.000 11.84 0.00 40.87 1.85
789 791 0.473326 TTGGCTTTGGCATTGGCTTT 59.527 45.000 11.84 0.00 38.08 3.51
790 792 0.250424 GTTGGCTTTGGCATTGGCTT 60.250 50.000 11.84 0.00 38.08 4.35
791 793 1.372307 GTTGGCTTTGGCATTGGCT 59.628 52.632 11.84 0.00 38.08 4.75
792 794 0.321830 ATGTTGGCTTTGGCATTGGC 60.322 50.000 2.73 2.73 38.08 4.52
793 795 1.676615 GGATGTTGGCTTTGGCATTGG 60.677 52.381 0.00 0.00 38.08 3.16
794 796 1.002201 TGGATGTTGGCTTTGGCATTG 59.998 47.619 0.00 0.00 38.08 2.82
795 797 1.002315 GTGGATGTTGGCTTTGGCATT 59.998 47.619 0.00 0.00 38.08 3.56
796 798 0.609662 GTGGATGTTGGCTTTGGCAT 59.390 50.000 0.00 0.00 38.08 4.40
797 799 0.758310 TGTGGATGTTGGCTTTGGCA 60.758 50.000 0.00 0.00 40.87 4.92
798 800 0.392336 TTGTGGATGTTGGCTTTGGC 59.608 50.000 0.00 0.00 37.82 4.52
799 801 1.001181 CCTTGTGGATGTTGGCTTTGG 59.999 52.381 0.00 0.00 34.57 3.28
800 802 1.688197 ACCTTGTGGATGTTGGCTTTG 59.312 47.619 0.00 0.00 37.04 2.77
801 803 2.086610 ACCTTGTGGATGTTGGCTTT 57.913 45.000 0.00 0.00 37.04 3.51
802 804 1.963515 GAACCTTGTGGATGTTGGCTT 59.036 47.619 0.00 0.00 37.04 4.35
803 805 1.133513 TGAACCTTGTGGATGTTGGCT 60.134 47.619 0.00 0.00 37.04 4.75
804 806 1.000274 GTGAACCTTGTGGATGTTGGC 60.000 52.381 0.00 0.00 37.04 4.52
805 807 2.034558 GTGTGAACCTTGTGGATGTTGG 59.965 50.000 0.00 0.00 37.04 3.77
806 808 2.034558 GGTGTGAACCTTGTGGATGTTG 59.965 50.000 0.00 0.00 37.04 3.33
807 809 2.306847 GGTGTGAACCTTGTGGATGTT 58.693 47.619 0.00 0.00 37.04 2.71
808 810 1.214175 TGGTGTGAACCTTGTGGATGT 59.786 47.619 0.00 0.00 37.04 3.06
809 811 1.608590 GTGGTGTGAACCTTGTGGATG 59.391 52.381 0.00 0.00 37.04 3.51
810 812 1.478654 GGTGGTGTGAACCTTGTGGAT 60.479 52.381 0.00 0.00 34.66 3.41
811 813 0.106918 GGTGGTGTGAACCTTGTGGA 60.107 55.000 0.00 0.00 34.66 4.02
812 814 0.395036 TGGTGGTGTGAACCTTGTGG 60.395 55.000 0.00 0.00 38.60 4.17
813 815 1.405105 CTTGGTGGTGTGAACCTTGTG 59.595 52.381 0.00 0.00 38.60 3.33
814 816 1.684869 CCTTGGTGGTGTGAACCTTGT 60.685 52.381 0.00 0.00 38.60 3.16
815 817 1.032014 CCTTGGTGGTGTGAACCTTG 58.968 55.000 0.00 0.00 38.60 3.61
816 818 3.513209 CCTTGGTGGTGTGAACCTT 57.487 52.632 0.00 0.00 38.60 3.50
826 828 0.738389 GTGTGTGTGAACCTTGGTGG 59.262 55.000 0.00 0.00 42.93 4.61
827 829 1.132262 GTGTGTGTGTGAACCTTGGTG 59.868 52.381 0.00 0.00 0.00 4.17
828 830 1.271652 TGTGTGTGTGTGAACCTTGGT 60.272 47.619 0.00 0.00 0.00 3.67
829 831 1.458398 TGTGTGTGTGTGAACCTTGG 58.542 50.000 0.00 0.00 0.00 3.61
830 832 3.876914 ACTATGTGTGTGTGTGAACCTTG 59.123 43.478 0.00 0.00 0.00 3.61
831 833 4.127171 GACTATGTGTGTGTGTGAACCTT 58.873 43.478 0.00 0.00 0.00 3.50
832 834 3.494398 GGACTATGTGTGTGTGTGAACCT 60.494 47.826 0.00 0.00 0.00 3.50
833 835 2.806244 GGACTATGTGTGTGTGTGAACC 59.194 50.000 0.00 0.00 0.00 3.62
834 836 3.462982 TGGACTATGTGTGTGTGTGAAC 58.537 45.455 0.00 0.00 0.00 3.18
835 837 3.494223 CCTGGACTATGTGTGTGTGTGAA 60.494 47.826 0.00 0.00 0.00 3.18
836 838 2.037121 CCTGGACTATGTGTGTGTGTGA 59.963 50.000 0.00 0.00 0.00 3.58
837 839 2.037121 TCCTGGACTATGTGTGTGTGTG 59.963 50.000 0.00 0.00 0.00 3.82
838 840 2.325484 TCCTGGACTATGTGTGTGTGT 58.675 47.619 0.00 0.00 0.00 3.72
839 841 3.067106 GTTCCTGGACTATGTGTGTGTG 58.933 50.000 0.00 0.00 0.00 3.82
840 842 2.703536 TGTTCCTGGACTATGTGTGTGT 59.296 45.455 0.00 0.00 0.00 3.72
841 843 3.401033 TGTTCCTGGACTATGTGTGTG 57.599 47.619 0.00 0.00 0.00 3.82
842 844 4.134563 GTTTGTTCCTGGACTATGTGTGT 58.865 43.478 0.00 0.00 0.00 3.72
843 845 4.133820 TGTTTGTTCCTGGACTATGTGTG 58.866 43.478 0.00 0.00 0.00 3.82
844 846 4.431416 TGTTTGTTCCTGGACTATGTGT 57.569 40.909 0.00 0.00 0.00 3.72
845 847 4.320494 GCTTGTTTGTTCCTGGACTATGTG 60.320 45.833 0.00 0.00 0.00 3.21
846 848 3.821033 GCTTGTTTGTTCCTGGACTATGT 59.179 43.478 0.00 0.00 0.00 2.29
847 849 3.820467 TGCTTGTTTGTTCCTGGACTATG 59.180 43.478 0.00 0.00 0.00 2.23
848 850 4.098914 TGCTTGTTTGTTCCTGGACTAT 57.901 40.909 0.00 0.00 0.00 2.12
849 851 3.569194 TGCTTGTTTGTTCCTGGACTA 57.431 42.857 0.00 0.00 0.00 2.59
850 852 2.435372 TGCTTGTTTGTTCCTGGACT 57.565 45.000 0.00 0.00 0.00 3.85
851 853 2.622942 TGATGCTTGTTTGTTCCTGGAC 59.377 45.455 0.00 0.00 0.00 4.02
852 854 2.942804 TGATGCTTGTTTGTTCCTGGA 58.057 42.857 0.00 0.00 0.00 3.86
853 855 3.553508 CCTTGATGCTTGTTTGTTCCTGG 60.554 47.826 0.00 0.00 0.00 4.45
854 856 3.553508 CCCTTGATGCTTGTTTGTTCCTG 60.554 47.826 0.00 0.00 0.00 3.86
855 857 2.629617 CCCTTGATGCTTGTTTGTTCCT 59.370 45.455 0.00 0.00 0.00 3.36
856 858 2.365293 ACCCTTGATGCTTGTTTGTTCC 59.635 45.455 0.00 0.00 0.00 3.62
857 859 3.733443 ACCCTTGATGCTTGTTTGTTC 57.267 42.857 0.00 0.00 0.00 3.18
858 860 4.649218 ACTAACCCTTGATGCTTGTTTGTT 59.351 37.500 0.00 0.00 0.00 2.83
859 861 4.037923 CACTAACCCTTGATGCTTGTTTGT 59.962 41.667 0.00 0.00 0.00 2.83
860 862 4.549458 CACTAACCCTTGATGCTTGTTTG 58.451 43.478 0.00 0.00 0.00 2.93
861 863 3.005791 GCACTAACCCTTGATGCTTGTTT 59.994 43.478 0.00 0.00 33.44 2.83
862 864 2.558359 GCACTAACCCTTGATGCTTGTT 59.442 45.455 0.00 0.00 33.44 2.83
863 865 2.162681 GCACTAACCCTTGATGCTTGT 58.837 47.619 0.00 0.00 33.44 3.16
864 866 2.163010 CAGCACTAACCCTTGATGCTTG 59.837 50.000 0.00 0.00 44.01 4.01
865 867 2.040278 TCAGCACTAACCCTTGATGCTT 59.960 45.455 0.00 0.00 44.01 3.91
867 869 2.012673 CTCAGCACTAACCCTTGATGC 58.987 52.381 0.00 0.00 36.52 3.91
868 870 2.636830 CCTCAGCACTAACCCTTGATG 58.363 52.381 0.00 0.00 0.00 3.07
869 871 1.561542 CCCTCAGCACTAACCCTTGAT 59.438 52.381 0.00 0.00 0.00 2.57
870 872 0.984230 CCCTCAGCACTAACCCTTGA 59.016 55.000 0.00 0.00 0.00 3.02
871 873 0.678048 GCCCTCAGCACTAACCCTTG 60.678 60.000 0.00 0.00 42.97 3.61
872 874 1.685820 GCCCTCAGCACTAACCCTT 59.314 57.895 0.00 0.00 42.97 3.95
873 875 3.404773 GCCCTCAGCACTAACCCT 58.595 61.111 0.00 0.00 42.97 4.34
883 885 0.535780 TTGTTGAGCTGTGCCCTCAG 60.536 55.000 0.00 0.00 40.16 3.35
884 886 0.535780 CTTGTTGAGCTGTGCCCTCA 60.536 55.000 0.00 0.00 37.54 3.86
885 887 2.251600 CTTGTTGAGCTGTGCCCTC 58.748 57.895 0.00 0.00 0.00 4.30
886 888 4.488790 CTTGTTGAGCTGTGCCCT 57.511 55.556 0.00 0.00 0.00 5.19
895 897 1.102154 TGTGTGTTGGGCTTGTTGAG 58.898 50.000 0.00 0.00 0.00 3.02
896 898 0.814457 GTGTGTGTTGGGCTTGTTGA 59.186 50.000 0.00 0.00 0.00 3.18
897 899 0.529833 TGTGTGTGTTGGGCTTGTTG 59.470 50.000 0.00 0.00 0.00 3.33
898 900 0.530288 GTGTGTGTGTTGGGCTTGTT 59.470 50.000 0.00 0.00 0.00 2.83
899 901 0.610509 TGTGTGTGTGTTGGGCTTGT 60.611 50.000 0.00 0.00 0.00 3.16
900 902 0.529833 TTGTGTGTGTGTTGGGCTTG 59.470 50.000 0.00 0.00 0.00 4.01
901 903 1.067213 GTTTGTGTGTGTGTTGGGCTT 60.067 47.619 0.00 0.00 0.00 4.35
902 904 0.530288 GTTTGTGTGTGTGTTGGGCT 59.470 50.000 0.00 0.00 0.00 5.19
903 905 0.459411 GGTTTGTGTGTGTGTTGGGC 60.459 55.000 0.00 0.00 0.00 5.36
904 906 0.174617 GGGTTTGTGTGTGTGTTGGG 59.825 55.000 0.00 0.00 0.00 4.12
905 907 0.174617 GGGGTTTGTGTGTGTGTTGG 59.825 55.000 0.00 0.00 0.00 3.77
906 908 1.181786 AGGGGTTTGTGTGTGTGTTG 58.818 50.000 0.00 0.00 0.00 3.33
907 909 2.371306 GTAGGGGTTTGTGTGTGTGTT 58.629 47.619 0.00 0.00 0.00 3.32
908 910 1.744456 CGTAGGGGTTTGTGTGTGTGT 60.744 52.381 0.00 0.00 0.00 3.72
909 911 0.941542 CGTAGGGGTTTGTGTGTGTG 59.058 55.000 0.00 0.00 0.00 3.82
910 912 0.542805 ACGTAGGGGTTTGTGTGTGT 59.457 50.000 0.00 0.00 0.00 3.72
911 913 1.223187 GACGTAGGGGTTTGTGTGTG 58.777 55.000 0.00 0.00 0.00 3.82
912 914 0.107268 GGACGTAGGGGTTTGTGTGT 59.893 55.000 0.00 0.00 0.00 3.72
913 915 0.395312 AGGACGTAGGGGTTTGTGTG 59.605 55.000 0.00 0.00 0.00 3.82
914 916 0.683412 GAGGACGTAGGGGTTTGTGT 59.317 55.000 0.00 0.00 0.00 3.72
915 917 0.682852 TGAGGACGTAGGGGTTTGTG 59.317 55.000 0.00 0.00 0.00 3.33
916 918 0.683412 GTGAGGACGTAGGGGTTTGT 59.317 55.000 0.00 0.00 0.00 2.83
917 919 0.036671 GGTGAGGACGTAGGGGTTTG 60.037 60.000 0.00 0.00 0.00 2.93
918 920 0.178912 AGGTGAGGACGTAGGGGTTT 60.179 55.000 0.00 0.00 0.00 3.27
919 921 0.614134 GAGGTGAGGACGTAGGGGTT 60.614 60.000 0.00 0.00 0.00 4.11
920 922 1.000107 GAGGTGAGGACGTAGGGGT 60.000 63.158 0.00 0.00 0.00 4.95
925 927 1.212934 AGGAGGGAGGTGAGGACGTA 61.213 60.000 0.00 0.00 0.00 3.57
1276 1278 1.360393 AACACCTCCCTTGCCCTTGA 61.360 55.000 0.00 0.00 0.00 3.02
1278 1280 1.460699 GAACACCTCCCTTGCCCTT 59.539 57.895 0.00 0.00 0.00 3.95
1302 1304 0.465097 CAGCATCCTTCTCCGGCATT 60.465 55.000 0.00 0.00 0.00 3.56
1587 1589 2.497138 CTCATCTGCTGGAACACAACA 58.503 47.619 0.00 0.00 0.00 3.33
1712 1717 8.229811 TGATGAAAGTATTGTCATTCAGTTTCG 58.770 33.333 0.00 0.00 34.61 3.46
2118 2123 1.228033 ACGGACCTTTTCAACCCCG 60.228 57.895 0.00 0.00 42.30 5.73
2656 3837 9.527157 TCTTATTCTCATTTGGTGGAATACAAA 57.473 29.630 0.00 0.00 40.44 2.83
2754 3935 1.885887 CGGGGCTTGACTTGATTTTGA 59.114 47.619 0.00 0.00 0.00 2.69
2764 3945 3.373565 CTTTGGCCGGGGCTTGAC 61.374 66.667 22.12 0.00 41.60 3.18
2784 3965 0.239347 GACGACTTGCTTTGCTGCAT 59.761 50.000 1.84 0.00 42.96 3.96
2843 4024 0.249657 GCCTTCAGATAGGGCACTCG 60.250 60.000 0.00 0.00 44.69 4.18
2860 4041 1.165270 AGAACAAACATACCAGCGCC 58.835 50.000 2.29 0.00 0.00 6.53
2969 4152 5.643777 ACATGAGTTATGCTCTAAAACGCTT 59.356 36.000 0.00 0.00 44.41 4.68
3023 4206 2.036475 AGAACACTGATGCAGAAGACGT 59.964 45.455 5.48 0.00 35.18 4.34
3058 4241 4.202461 ACAGTGAACTCAATGGTGTATGGT 60.202 41.667 11.44 0.00 45.21 3.55
3076 4259 4.377021 TGAAAGTAGCACAACCTACAGTG 58.623 43.478 2.63 0.00 40.07 3.66
3182 4365 6.018425 GCTGACAATGTATAGATGAACTGTGG 60.018 42.308 1.90 0.00 0.00 4.17
3202 4385 3.854666 TCTCTATGCAGTTTGAGCTGAC 58.145 45.455 0.00 0.00 38.70 3.51
3255 5399 7.254795 GGAGATGTAAATTTAGTGAATGGGTCG 60.255 40.741 0.00 0.00 0.00 4.79
3259 5403 6.513393 GCGGGAGATGTAAATTTAGTGAATGG 60.513 42.308 0.00 0.00 0.00 3.16
3261 5405 6.119536 TGCGGGAGATGTAAATTTAGTGAAT 58.880 36.000 0.00 0.00 0.00 2.57
3282 5426 0.886490 AGGAAGTCAAACAGCCTGCG 60.886 55.000 0.00 0.00 0.00 5.18
3429 5573 2.498167 AGGAAGCACAATGTGAGACAC 58.502 47.619 18.66 2.66 35.23 3.67
3431 5575 4.540824 GAAAAGGAAGCACAATGTGAGAC 58.459 43.478 18.66 6.57 35.23 3.36
3438 5582 3.261643 GGGATTGGAAAAGGAAGCACAAT 59.738 43.478 0.00 0.00 0.00 2.71
3465 5609 3.117888 GGGCATCTGATAACCCTGAGAAA 60.118 47.826 16.85 0.00 39.42 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.