Multiple sequence alignment - TraesCS5B01G146100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G146100 chr5B 100.000 8230 0 0 1 8230 273721986 273713757 0.000000e+00 15199.0
1 TraesCS5B01G146100 chr5B 96.571 175 4 2 6310 6484 334784941 334785113 1.050000e-73 289.0
2 TraesCS5B01G146100 chr5B 95.480 177 6 2 6308 6482 276913784 276913960 1.750000e-71 281.0
3 TraesCS5B01G146100 chr5B 86.667 150 17 1 1737 1886 299602371 299602225 6.610000e-36 163.0
4 TraesCS5B01G146100 chr5B 86.275 153 16 2 1734 1886 208523302 208523449 2.380000e-35 161.0
5 TraesCS5B01G146100 chr5D 92.695 3696 150 46 658 4304 231744033 231747657 0.000000e+00 5219.0
6 TraesCS5B01G146100 chr5D 92.539 1595 76 20 4700 6266 231747980 231749559 0.000000e+00 2246.0
7 TraesCS5B01G146100 chr5D 93.521 1173 36 12 6489 7636 231749589 231750746 0.000000e+00 1709.0
8 TraesCS5B01G146100 chr5D 87.898 628 54 5 7622 8229 231750761 231751386 0.000000e+00 719.0
9 TraesCS5B01G146100 chr5D 87.005 631 43 22 1 624 231742365 231742963 0.000000e+00 675.0
10 TraesCS5B01G146100 chr5D 90.028 361 31 2 4332 4687 231747640 231748000 5.820000e-126 462.0
11 TraesCS5B01G146100 chr5D 87.234 141 15 1 1744 1884 27353993 27353856 3.080000e-34 158.0
12 TraesCS5B01G146100 chr5A 92.475 2299 120 25 1879 4165 325374919 325372662 0.000000e+00 3238.0
13 TraesCS5B01G146100 chr5A 93.973 979 24 11 6489 7454 325371546 325370590 0.000000e+00 1448.0
14 TraesCS5B01G146100 chr5A 91.268 1088 52 16 5215 6266 325372656 325371576 0.000000e+00 1443.0
15 TraesCS5B01G146100 chr5A 91.918 1027 41 14 711 1727 325376324 325375330 0.000000e+00 1399.0
16 TraesCS5B01G146100 chr5A 86.284 627 64 8 7622 8227 325369129 325368504 0.000000e+00 662.0
17 TraesCS5B01G146100 chr5A 97.619 126 3 0 1 126 325378823 325378698 5.000000e-52 217.0
18 TraesCS5B01G146100 chr5A 83.092 207 26 6 7530 7731 653300267 653300065 6.560000e-41 180.0
19 TraesCS5B01G146100 chr5A 91.781 73 4 1 569 641 325378255 325378185 5.260000e-17 100.0
20 TraesCS5B01G146100 chr5A 91.935 62 4 1 139 199 325378608 325378547 1.470000e-12 86.1
21 TraesCS5B01G146100 chr5A 100.000 29 0 0 658 686 325376354 325376326 4.000000e-03 54.7
22 TraesCS5B01G146100 chr5A 100.000 28 0 0 6292 6319 325371578 325371551 1.500000e-02 52.8
23 TraesCS5B01G146100 chr1A 98.182 165 3 0 6318 6482 493543790 493543626 1.050000e-73 289.0
24 TraesCS5B01G146100 chr1A 84.878 205 18 11 7529 7725 531508931 531509130 2.340000e-45 195.0
25 TraesCS5B01G146100 chr3B 97.076 171 4 1 6314 6484 783212706 783212875 3.760000e-73 287.0
26 TraesCS5B01G146100 chr3B 95.455 176 7 1 6307 6482 256781299 256781473 6.290000e-71 279.0
27 TraesCS5B01G146100 chr3B 85.333 150 19 3 1737 1886 586737909 586737763 1.430000e-32 152.0
28 TraesCS5B01G146100 chr2B 95.531 179 8 0 6306 6484 755513144 755512966 3.760000e-73 287.0
29 TraesCS5B01G146100 chr2B 96.512 172 5 1 6313 6483 344866559 344866730 4.860000e-72 283.0
30 TraesCS5B01G146100 chr2B 90.435 115 11 0 4519 4633 200522163 200522049 1.430000e-32 152.0
31 TraesCS5B01G146100 chr2B 87.200 125 14 2 4518 4641 134373694 134373817 3.100000e-29 141.0
32 TraesCS5B01G146100 chr2A 97.605 167 4 0 6316 6482 632622279 632622113 3.760000e-73 287.0
33 TraesCS5B01G146100 chr2A 82.888 187 25 6 7547 7730 603544272 603544090 2.380000e-35 161.0
34 TraesCS5B01G146100 chr2A 82.353 153 23 4 2974 3124 165849923 165849773 6.700000e-26 130.0
35 TraesCS5B01G146100 chr2A 91.111 45 4 0 2493 2537 67537599 67537643 2.480000e-05 62.1
36 TraesCS5B01G146100 chr1B 97.059 170 4 1 6313 6482 74246891 74246723 1.350000e-72 285.0
37 TraesCS5B01G146100 chr1B 82.759 203 31 4 7529 7729 6358326 6358126 2.360000e-40 178.0
38 TraesCS5B01G146100 chr1B 81.863 204 32 5 7529 7730 349715603 349715803 5.110000e-37 167.0
39 TraesCS5B01G146100 chr1B 91.071 112 9 1 4519 4629 467392796 467392907 5.150000e-32 150.0
40 TraesCS5B01G146100 chr1B 89.565 115 12 0 4519 4633 110936823 110936937 6.660000e-31 147.0
41 TraesCS5B01G146100 chr1D 86.164 159 14 6 1737 1894 7349851 7349700 1.840000e-36 165.0
42 TraesCS5B01G146100 chr1D 89.565 115 12 0 4519 4633 270877606 270877720 6.660000e-31 147.0
43 TraesCS5B01G146100 chr6B 81.373 204 31 5 7529 7730 648650536 648650338 8.550000e-35 159.0
44 TraesCS5B01G146100 chr4D 86.000 150 16 3 1738 1886 483111340 483111485 1.110000e-33 156.0
45 TraesCS5B01G146100 chr4D 79.904 209 34 5 7529 7731 207595800 207595594 6.660000e-31 147.0
46 TraesCS5B01G146100 chr4D 91.111 45 4 0 2493 2537 453044642 453044686 2.480000e-05 62.1
47 TraesCS5B01G146100 chr4B 86.000 150 16 3 1738 1886 613321828 613321973 1.110000e-33 156.0
48 TraesCS5B01G146100 chr3A 81.000 200 32 6 7529 7725 462419765 462419961 3.980000e-33 154.0
49 TraesCS5B01G146100 chr3A 90.435 115 11 0 4519 4633 39311063 39311177 1.430000e-32 152.0
50 TraesCS5B01G146100 chr3A 90.435 115 11 0 4519 4633 39327795 39327909 1.430000e-32 152.0
51 TraesCS5B01G146100 chr3A 91.489 47 4 0 2491 2537 32122350 32122396 1.920000e-06 65.8
52 TraesCS5B01G146100 chr4A 85.714 147 16 5 1739 1883 722322157 722322300 5.150000e-32 150.0
53 TraesCS5B01G146100 chr7D 89.565 115 12 0 4519 4633 102302203 102302089 6.660000e-31 147.0
54 TraesCS5B01G146100 chr2D 82.353 153 23 4 2974 3124 155736081 155735931 6.700000e-26 130.0
55 TraesCS5B01G146100 chr2D 93.333 45 3 0 2499 2543 67220920 67220876 5.330000e-07 67.6
56 TraesCS5B01G146100 chr7B 91.489 47 4 0 2499 2545 645325282 645325236 1.920000e-06 65.8
57 TraesCS5B01G146100 chr7B 94.872 39 2 0 2499 2537 512694450 512694488 2.480000e-05 62.1
58 TraesCS5B01G146100 chr6D 91.111 45 4 0 2484 2528 332955984 332956028 2.480000e-05 62.1
59 TraesCS5B01G146100 chr7A 92.683 41 2 1 2490 2529 501588667 501588627 3.210000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G146100 chr5B 273713757 273721986 8229 True 15199.000000 15199 100.000000 1 8230 1 chr5B.!!$R1 8229
1 TraesCS5B01G146100 chr5D 231742365 231751386 9021 False 1838.333333 5219 90.614333 1 8229 6 chr5D.!!$F1 8228
2 TraesCS5B01G146100 chr5A 325368504 325378823 10319 True 870.060000 3238 93.725300 1 8227 10 chr5A.!!$R2 8226

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
385 494 0.034863 AGTGTCGAGTCCTCTCCCTC 60.035 60.000 0.00 0.0 37.40 4.30 F
951 2947 0.253894 CTGATCCATCCACACAGCCA 59.746 55.000 0.00 0.0 0.00 4.75 F
1011 3007 0.392461 GTTAAGCCATGTCGAGCCCA 60.392 55.000 0.00 0.0 0.00 5.36 F
2159 4517 1.003003 TGAGGATTGTTCCATGCGTCA 59.997 47.619 0.00 0.0 45.30 4.35 F
2587 4962 1.152368 GGGCTGATGGATGGGAAGG 59.848 63.158 0.00 0.0 0.00 3.46 F
3635 6014 1.335597 CGAAGCAGGTACACGTTCAGA 60.336 52.381 0.00 0.0 0.00 3.27 F
4018 6397 0.038166 AACGGGTCTCATTGTGGCAT 59.962 50.000 0.00 0.0 0.00 4.40 F
4065 6444 0.250553 CGGTGGCTGGTTTCAAGGTA 60.251 55.000 0.00 0.0 0.00 3.08 F
4069 6448 1.134037 TGGCTGGTTTCAAGGTACGTT 60.134 47.619 0.00 0.0 0.00 3.99 F
4804 7196 1.512926 AGATTTCTCACCACGTGTGC 58.487 50.000 15.65 0.0 45.03 4.57 F
6249 8679 1.066471 TGGGCTATGGCTATGCATCA 58.934 50.000 0.19 0.0 38.73 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1689 3700 0.600255 GCCAGTTCATATCCGGACGG 60.600 60.000 6.12 3.96 0.00 4.79 R
2462 4824 2.116827 TTCCGTGTGTGTTTTCAGGT 57.883 45.000 0.00 0.00 0.00 4.00 R
2874 5249 2.966309 GAAGTTGAAGGTGCGGCGG 61.966 63.158 9.78 0.00 0.00 6.13 R
3725 6104 0.755079 TCCTCGAATGGCCTGATCAG 59.245 55.000 16.24 16.24 0.00 2.90 R
3998 6377 0.888736 TGCCACAATGAGACCCGTTG 60.889 55.000 0.00 0.00 45.12 4.10 R
5097 7490 3.975168 TTCCCAAACAGAGCTACCTAC 57.025 47.619 0.00 0.00 0.00 3.18 R
5648 8052 0.733150 TCTAGTGGAGTCGTCGCATG 59.267 55.000 0.00 0.00 0.00 4.06 R
5689 8093 0.761187 CCTTCTGCTAGCCCTATGCA 59.239 55.000 13.29 0.00 44.83 3.96 R
5879 8284 2.857152 CTCTTTCAACGCTAGCAGCTAG 59.143 50.000 23.40 23.40 39.60 3.42 R
6264 8694 0.033601 ACAAACCACAAGGAGCCACA 60.034 50.000 0.00 0.00 38.69 4.17 R
7731 11489 0.042535 TGAAGACGTGCGCTTTTTCG 60.043 50.000 9.73 8.36 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.878667 ATGACAATTATTTTTGCAGAATGATGA 57.121 25.926 7.44 0.00 39.69 2.92
126 127 3.815809 CTCTTTTGGTGGGTGAAGTACA 58.184 45.455 0.00 0.00 0.00 2.90
127 128 4.204012 CTCTTTTGGTGGGTGAAGTACAA 58.796 43.478 0.00 0.00 0.00 2.41
128 129 4.204012 TCTTTTGGTGGGTGAAGTACAAG 58.796 43.478 0.00 0.00 0.00 3.16
129 130 3.655615 TTTGGTGGGTGAAGTACAAGT 57.344 42.857 0.00 0.00 0.00 3.16
130 131 2.631160 TGGTGGGTGAAGTACAAGTG 57.369 50.000 0.00 0.00 0.00 3.16
131 132 1.235724 GGTGGGTGAAGTACAAGTGC 58.764 55.000 0.00 0.00 0.00 4.40
132 133 1.202770 GGTGGGTGAAGTACAAGTGCT 60.203 52.381 0.00 0.00 0.00 4.40
133 134 2.572290 GTGGGTGAAGTACAAGTGCTT 58.428 47.619 3.16 3.16 38.22 3.91
134 135 3.495453 GGTGGGTGAAGTACAAGTGCTTA 60.495 47.826 3.53 0.00 35.67 3.09
135 136 3.497262 GTGGGTGAAGTACAAGTGCTTAC 59.503 47.826 3.53 3.69 35.67 2.34
136 137 2.735134 GGGTGAAGTACAAGTGCTTACG 59.265 50.000 3.53 0.00 35.67 3.18
189 273 4.182339 GGAGTCTATCCTTCCAACGTTTC 58.818 47.826 0.00 0.00 45.64 2.78
191 275 5.074584 AGTCTATCCTTCCAACGTTTCTC 57.925 43.478 0.00 0.00 0.00 2.87
192 276 4.773149 AGTCTATCCTTCCAACGTTTCTCT 59.227 41.667 0.00 0.00 0.00 3.10
193 277 5.103687 GTCTATCCTTCCAACGTTTCTCTC 58.896 45.833 0.00 0.00 0.00 3.20
194 278 5.017490 TCTATCCTTCCAACGTTTCTCTCT 58.983 41.667 0.00 0.00 0.00 3.10
195 279 3.662247 TCCTTCCAACGTTTCTCTCTC 57.338 47.619 0.00 0.00 0.00 3.20
196 280 3.231818 TCCTTCCAACGTTTCTCTCTCT 58.768 45.455 0.00 0.00 0.00 3.10
197 281 3.256136 TCCTTCCAACGTTTCTCTCTCTC 59.744 47.826 0.00 0.00 0.00 3.20
198 282 3.257127 CCTTCCAACGTTTCTCTCTCTCT 59.743 47.826 0.00 0.00 0.00 3.10
199 283 4.481463 CTTCCAACGTTTCTCTCTCTCTC 58.519 47.826 0.00 0.00 0.00 3.20
200 284 3.757270 TCCAACGTTTCTCTCTCTCTCT 58.243 45.455 0.00 0.00 0.00 3.10
201 285 3.754323 TCCAACGTTTCTCTCTCTCTCTC 59.246 47.826 0.00 0.00 0.00 3.20
202 286 3.756434 CCAACGTTTCTCTCTCTCTCTCT 59.244 47.826 0.00 0.00 0.00 3.10
203 287 4.142687 CCAACGTTTCTCTCTCTCTCTCTC 60.143 50.000 0.00 0.00 0.00 3.20
204 288 4.553330 ACGTTTCTCTCTCTCTCTCTCT 57.447 45.455 0.00 0.00 0.00 3.10
205 289 4.504858 ACGTTTCTCTCTCTCTCTCTCTC 58.495 47.826 0.00 0.00 0.00 3.20
206 290 4.223032 ACGTTTCTCTCTCTCTCTCTCTCT 59.777 45.833 0.00 0.00 0.00 3.10
207 291 4.806247 CGTTTCTCTCTCTCTCTCTCTCTC 59.194 50.000 0.00 0.00 0.00 3.20
208 292 5.394663 CGTTTCTCTCTCTCTCTCTCTCTCT 60.395 48.000 0.00 0.00 0.00 3.10
209 293 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
210 294 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
211 295 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
212 296 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
213 297 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
214 298 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
215 299 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
216 300 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
217 301 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
218 302 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
219 303 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
277 375 5.801380 TGGTGTTGGTTTTAGTATCCTCTC 58.199 41.667 0.00 0.00 0.00 3.20
384 493 0.322997 CAGTGTCGAGTCCTCTCCCT 60.323 60.000 0.00 0.00 37.40 4.20
385 494 0.034863 AGTGTCGAGTCCTCTCCCTC 60.035 60.000 0.00 0.00 37.40 4.30
386 495 0.034863 GTGTCGAGTCCTCTCCCTCT 60.035 60.000 0.00 0.00 37.40 3.69
387 496 0.699399 TGTCGAGTCCTCTCCCTCTT 59.301 55.000 0.00 0.00 37.40 2.85
388 497 1.340211 TGTCGAGTCCTCTCCCTCTTC 60.340 57.143 0.00 0.00 37.40 2.87
389 498 0.256464 TCGAGTCCTCTCCCTCTTCC 59.744 60.000 0.00 0.00 37.40 3.46
390 499 0.753848 CGAGTCCTCTCCCTCTTCCC 60.754 65.000 0.00 0.00 37.40 3.97
391 500 0.397957 GAGTCCTCTCCCTCTTCCCC 60.398 65.000 0.00 0.00 34.87 4.81
395 504 0.621082 CCTCTCCCTCTTCCCCAAAC 59.379 60.000 0.00 0.00 0.00 2.93
416 525 2.671596 GCGCCAAAAAGTTGCATAAGA 58.328 42.857 0.00 0.00 33.01 2.10
479 601 1.330829 GCACCCGCTCTGCTAATTAAC 59.669 52.381 0.00 0.00 34.30 2.01
487 609 4.979197 CGCTCTGCTAATTAACTACTCCTG 59.021 45.833 0.00 0.00 0.00 3.86
641 763 5.183904 GTGATCACCCTTAAGCATTCAGTTT 59.816 40.000 15.31 0.00 0.00 2.66
642 764 5.183713 TGATCACCCTTAAGCATTCAGTTTG 59.816 40.000 0.00 0.00 0.00 2.93
643 765 4.469657 TCACCCTTAAGCATTCAGTTTGT 58.530 39.130 0.00 0.00 0.00 2.83
648 770 5.710099 CCCTTAAGCATTCAGTTTGTTAGGA 59.290 40.000 0.00 0.00 0.00 2.94
650 772 6.349363 CCTTAAGCATTCAGTTTGTTAGGACC 60.349 42.308 0.00 0.00 0.00 4.46
651 773 4.373156 AGCATTCAGTTTGTTAGGACCT 57.627 40.909 0.00 0.00 0.00 3.85
652 774 4.074970 AGCATTCAGTTTGTTAGGACCTG 58.925 43.478 3.53 0.00 0.00 4.00
654 776 3.502123 TTCAGTTTGTTAGGACCTGGG 57.498 47.619 3.53 0.00 0.00 4.45
655 777 2.414612 TCAGTTTGTTAGGACCTGGGT 58.585 47.619 3.53 0.00 0.00 4.51
656 778 2.370849 TCAGTTTGTTAGGACCTGGGTC 59.629 50.000 11.03 11.03 43.87 4.46
688 2684 1.970114 CAGCACTCAACCTGCCCTG 60.970 63.158 0.00 0.00 35.01 4.45
689 2685 3.368571 GCACTCAACCTGCCCTGC 61.369 66.667 0.00 0.00 0.00 4.85
693 2689 3.933048 CTCAACCTGCCCTGCCCTG 62.933 68.421 0.00 0.00 0.00 4.45
756 2752 2.202716 AGCGTCAGATGAGCAGCG 60.203 61.111 0.00 0.00 0.00 5.18
805 2801 3.551407 GGGGGCGTCATCCTCCTC 61.551 72.222 0.00 0.00 43.73 3.71
806 2802 3.551407 GGGGCGTCATCCTCCTCC 61.551 72.222 0.00 0.00 0.00 4.30
807 2803 2.444895 GGGCGTCATCCTCCTCCT 60.445 66.667 0.00 0.00 0.00 3.69
808 2804 2.503382 GGGCGTCATCCTCCTCCTC 61.503 68.421 0.00 0.00 0.00 3.71
809 2805 2.503382 GGCGTCATCCTCCTCCTCC 61.503 68.421 0.00 0.00 0.00 4.30
810 2806 1.758514 GCGTCATCCTCCTCCTCCA 60.759 63.158 0.00 0.00 0.00 3.86
901 2897 1.799181 CGTCTTCTGCACCTATCACGG 60.799 57.143 0.00 0.00 0.00 4.94
951 2947 0.253894 CTGATCCATCCACACAGCCA 59.746 55.000 0.00 0.00 0.00 4.75
955 2951 1.676635 CCATCCACACAGCCACAGG 60.677 63.158 0.00 0.00 0.00 4.00
965 2961 0.687757 CAGCCACAGGGAGCCTAGTA 60.688 60.000 0.00 0.00 35.59 1.82
966 2962 0.688087 AGCCACAGGGAGCCTAGTAC 60.688 60.000 0.00 0.00 35.59 2.73
1011 3007 0.392461 GTTAAGCCATGTCGAGCCCA 60.392 55.000 0.00 0.00 0.00 5.36
1115 3111 1.122227 AGCTCTCCATCTCTTCTGCC 58.878 55.000 0.00 0.00 0.00 4.85
1116 3112 1.122227 GCTCTCCATCTCTTCTGCCT 58.878 55.000 0.00 0.00 0.00 4.75
1117 3113 1.069049 GCTCTCCATCTCTTCTGCCTC 59.931 57.143 0.00 0.00 0.00 4.70
1118 3114 2.669781 CTCTCCATCTCTTCTGCCTCT 58.330 52.381 0.00 0.00 0.00 3.69
1119 3115 3.033184 CTCTCCATCTCTTCTGCCTCTT 58.967 50.000 0.00 0.00 0.00 2.85
1160 3156 4.752661 AAGTTTATCGCGCAACCTAAAA 57.247 36.364 8.75 0.00 0.00 1.52
1274 3278 9.661187 GCATGTTCTTGTGATTAGATTAGATTG 57.339 33.333 0.00 0.00 0.00 2.67
1318 3322 8.771920 TTACAACTACACCATGAACTGAATAG 57.228 34.615 0.00 0.00 0.00 1.73
1338 3342 2.027837 AGGATTGTGGGCTTTCAAATGC 60.028 45.455 0.00 0.00 0.00 3.56
1342 3346 4.679373 TTGTGGGCTTTCAAATGCTTAA 57.321 36.364 1.34 0.00 0.00 1.85
1363 3367 8.295288 GCTTAACTCAATTATCAAGGATGGATG 58.705 37.037 0.00 0.00 0.00 3.51
1572 3583 5.240623 TGTCCACTAATTGGCAAACTAAGTG 59.759 40.000 19.35 19.35 46.47 3.16
1689 3700 2.399356 GCGGTAGCAGGCCTGAAAC 61.399 63.158 37.21 29.01 44.35 2.78
1759 3770 7.297108 ACCCCCTCCATTCACAAATATAAGATA 59.703 37.037 0.00 0.00 0.00 1.98
1797 3811 6.318900 TCTGATTCGGATGTATATAGACGCAT 59.681 38.462 0.00 0.00 0.00 4.73
1813 3827 5.270853 AGACGCATTTTAGTGTGTTTGTTC 58.729 37.500 0.00 0.00 42.45 3.18
1950 4303 9.058424 GTTGCATTGAAATACATCATCGATATG 57.942 33.333 0.00 5.53 0.00 1.78
1980 4338 7.361457 TCTATACCTGGTCAAATAGTTGAGG 57.639 40.000 5.73 6.98 44.44 3.86
2068 4426 7.510675 TCCAAGTTATATCAGGGAAGAGTTT 57.489 36.000 0.00 0.00 0.00 2.66
2139 4497 2.577563 TGATGAGTGATGGATTGGTGGT 59.422 45.455 0.00 0.00 0.00 4.16
2155 4513 1.474077 GTGGTGAGGATTGTTCCATGC 59.526 52.381 0.00 0.00 45.30 4.06
2159 4517 1.003003 TGAGGATTGTTCCATGCGTCA 59.997 47.619 0.00 0.00 45.30 4.35
2390 4748 8.076910 TCCTTGTTAACATGAAATTGGCATAT 57.923 30.769 20.00 0.00 0.00 1.78
2481 4843 2.116827 ACCTGAAAACACACACGGAA 57.883 45.000 0.00 0.00 0.00 4.30
2482 4844 2.438411 ACCTGAAAACACACACGGAAA 58.562 42.857 0.00 0.00 0.00 3.13
2483 4845 3.020984 ACCTGAAAACACACACGGAAAT 58.979 40.909 0.00 0.00 0.00 2.17
2484 4846 4.200874 ACCTGAAAACACACACGGAAATA 58.799 39.130 0.00 0.00 0.00 1.40
2485 4847 4.825085 ACCTGAAAACACACACGGAAATAT 59.175 37.500 0.00 0.00 0.00 1.28
2528 4899 6.110033 TCCATATTACTTGTCGCAGCTTTAA 58.890 36.000 0.00 0.00 0.00 1.52
2529 4900 6.036735 TCCATATTACTTGTCGCAGCTTTAAC 59.963 38.462 0.00 0.00 0.00 2.01
2537 4908 3.242608 TGTCGCAGCTTTAACACAACTTC 60.243 43.478 0.00 0.00 0.00 3.01
2540 4911 3.002246 CGCAGCTTTAACACAACTTCAGA 59.998 43.478 0.00 0.00 0.00 3.27
2587 4962 1.152368 GGGCTGATGGATGGGAAGG 59.848 63.158 0.00 0.00 0.00 3.46
2784 5159 2.665603 GTCCACCTCCTCAGCACC 59.334 66.667 0.00 0.00 0.00 5.01
3081 5456 2.112297 GTCAACGGCAACCAGGGA 59.888 61.111 0.00 0.00 0.00 4.20
3222 5597 1.731160 CTCGTCGACGTCTACTCCTTT 59.269 52.381 34.40 0.00 40.80 3.11
3348 5723 2.438975 TACCGGGTCGATGACGCT 60.439 61.111 6.32 0.00 42.18 5.07
3375 5750 1.983224 CAGGTTCATCGGGAGGTGT 59.017 57.895 0.00 0.00 42.96 4.16
3456 5831 2.034879 GCAGGACACCACCATGACG 61.035 63.158 0.00 0.00 0.00 4.35
3585 5960 1.443872 GCTCAACACCGACGACGAT 60.444 57.895 9.28 0.00 42.66 3.73
3591 5966 1.667236 ACACCGACGACGATACCATA 58.333 50.000 9.28 0.00 42.66 2.74
3635 6014 1.335597 CGAAGCAGGTACACGTTCAGA 60.336 52.381 0.00 0.00 0.00 3.27
3658 6037 3.383761 GTTGCAACATTTCCCAGACAAG 58.616 45.455 24.52 0.00 0.00 3.16
3659 6038 2.665165 TGCAACATTTCCCAGACAAGT 58.335 42.857 0.00 0.00 0.00 3.16
3660 6039 3.826524 TGCAACATTTCCCAGACAAGTA 58.173 40.909 0.00 0.00 0.00 2.24
3661 6040 4.211125 TGCAACATTTCCCAGACAAGTAA 58.789 39.130 0.00 0.00 0.00 2.24
3662 6041 4.278170 TGCAACATTTCCCAGACAAGTAAG 59.722 41.667 0.00 0.00 0.00 2.34
3663 6042 4.798574 CAACATTTCCCAGACAAGTAAGC 58.201 43.478 0.00 0.00 0.00 3.09
3664 6043 4.098914 ACATTTCCCAGACAAGTAAGCA 57.901 40.909 0.00 0.00 0.00 3.91
3665 6044 3.821033 ACATTTCCCAGACAAGTAAGCAC 59.179 43.478 0.00 0.00 0.00 4.40
3666 6045 3.569194 TTTCCCAGACAAGTAAGCACA 57.431 42.857 0.00 0.00 0.00 4.57
3667 6046 3.788227 TTCCCAGACAAGTAAGCACAT 57.212 42.857 0.00 0.00 0.00 3.21
3668 6047 4.901197 TTCCCAGACAAGTAAGCACATA 57.099 40.909 0.00 0.00 0.00 2.29
3669 6048 4.202245 TCCCAGACAAGTAAGCACATAC 57.798 45.455 0.00 0.00 0.00 2.39
3677 6056 5.883661 ACAAGTAAGCACATACGTACGTAT 58.116 37.500 30.28 30.28 41.49 3.06
3722 6101 5.901552 ACAAGGTGACAAGGTTAATTGTTG 58.098 37.500 0.00 0.00 43.32 3.33
3725 6104 6.575162 AGGTGACAAGGTTAATTGTTGATC 57.425 37.500 0.00 0.00 43.32 2.92
3785 6164 4.865761 GCCGGCGATACAGCGACA 62.866 66.667 12.58 0.00 39.90 4.35
3861 6240 3.580100 ATCGCCGCCATGATCGAGG 62.580 63.158 8.56 0.00 34.30 4.63
3894 6273 1.608336 CTGGTACCGGACTGGGTCA 60.608 63.158 16.40 0.00 44.64 4.02
3998 6377 1.331399 CCTCTTCCCCGACCTCTTCC 61.331 65.000 0.00 0.00 0.00 3.46
4018 6397 0.038166 AACGGGTCTCATTGTGGCAT 59.962 50.000 0.00 0.00 0.00 4.40
4065 6444 0.250553 CGGTGGCTGGTTTCAAGGTA 60.251 55.000 0.00 0.00 0.00 3.08
4069 6448 1.134037 TGGCTGGTTTCAAGGTACGTT 60.134 47.619 0.00 0.00 0.00 3.99
4070 6449 1.951602 GGCTGGTTTCAAGGTACGTTT 59.048 47.619 0.00 0.00 0.00 3.60
4168 6555 1.899814 AGAAGACCGATTGCACAGGTA 59.100 47.619 6.88 0.00 38.57 3.08
4180 6567 4.497291 TGCACAGGTAGGGGTTAATTAG 57.503 45.455 0.00 0.00 0.00 1.73
4184 6571 6.183361 TGCACAGGTAGGGGTTAATTAGTATC 60.183 42.308 0.00 0.00 0.00 2.24
4257 6644 5.064834 GTGCGATAAGAAGTTTTTAGAGGGG 59.935 44.000 0.00 0.00 0.00 4.79
4269 6656 6.045106 AGTTTTTAGAGGGGTATGACAGGAAA 59.955 38.462 0.00 0.00 0.00 3.13
4271 6658 6.652205 TTTAGAGGGGTATGACAGGAAATT 57.348 37.500 0.00 0.00 0.00 1.82
4299 6686 9.900710 AGAACATAGATACAACGATTTAGCTAG 57.099 33.333 0.00 0.00 0.00 3.42
4300 6687 9.894783 GAACATAGATACAACGATTTAGCTAGA 57.105 33.333 0.00 0.00 0.00 2.43
4301 6688 9.900710 AACATAGATACAACGATTTAGCTAGAG 57.099 33.333 0.00 0.00 0.00 2.43
4302 6689 8.024285 ACATAGATACAACGATTTAGCTAGAGC 58.976 37.037 0.00 0.00 42.49 4.09
4303 6690 6.392625 AGATACAACGATTTAGCTAGAGCA 57.607 37.500 4.01 0.00 45.16 4.26
4304 6691 6.806751 AGATACAACGATTTAGCTAGAGCAA 58.193 36.000 4.01 0.00 45.16 3.91
4305 6692 6.697892 AGATACAACGATTTAGCTAGAGCAAC 59.302 38.462 4.01 0.00 45.16 4.17
4306 6693 3.933332 ACAACGATTTAGCTAGAGCAACC 59.067 43.478 4.01 0.00 45.16 3.77
4307 6694 2.810650 ACGATTTAGCTAGAGCAACCG 58.189 47.619 4.01 0.00 45.16 4.44
4308 6695 1.523095 CGATTTAGCTAGAGCAACCGC 59.477 52.381 4.01 0.00 45.16 5.68
4309 6696 2.550978 GATTTAGCTAGAGCAACCGCA 58.449 47.619 4.01 0.00 45.16 5.69
4310 6697 2.465860 TTTAGCTAGAGCAACCGCAA 57.534 45.000 4.01 0.00 45.16 4.85
4311 6698 2.465860 TTAGCTAGAGCAACCGCAAA 57.534 45.000 4.01 0.00 45.16 3.68
4312 6699 2.465860 TAGCTAGAGCAACCGCAAAA 57.534 45.000 4.01 0.00 45.16 2.44
4313 6700 1.604604 AGCTAGAGCAACCGCAAAAA 58.395 45.000 4.01 0.00 45.16 1.94
4358 6745 6.763610 GGATTTAGCTAGAGCACTATGTTTGT 59.236 38.462 4.01 0.00 45.16 2.83
4359 6746 7.042389 GGATTTAGCTAGAGCACTATGTTTGTC 60.042 40.741 4.01 0.00 45.16 3.18
4361 6748 3.444034 AGCTAGAGCACTATGTTTGTCGA 59.556 43.478 4.01 0.00 45.16 4.20
4507 6894 5.751509 GCATATTTGAAGATCATGCAAAGCA 59.248 36.000 6.96 0.00 44.86 3.91
4509 6896 7.042051 GCATATTTGAAGATCATGCAAAGCAAT 60.042 33.333 6.96 0.00 43.62 3.56
4510 6897 9.471084 CATATTTGAAGATCATGCAAAGCAATA 57.529 29.630 11.50 2.94 43.62 1.90
4511 6898 7.766219 ATTTGAAGATCATGCAAAGCAATAC 57.234 32.000 11.50 0.00 43.62 1.89
4520 6911 7.315247 TCATGCAAAGCAATACGTTATACTT 57.685 32.000 0.00 0.00 43.62 2.24
4521 6912 7.406553 TCATGCAAAGCAATACGTTATACTTC 58.593 34.615 0.00 0.00 43.62 3.01
4523 6914 5.349270 TGCAAAGCAATACGTTATACTTCGT 59.651 36.000 0.00 0.00 38.61 3.85
4542 6933 6.204882 ACTTCGTCCCAAAATTCTTGTCTTAG 59.795 38.462 0.00 0.00 0.00 2.18
4804 7196 1.512926 AGATTTCTCACCACGTGTGC 58.487 50.000 15.65 0.00 45.03 4.57
4824 7216 4.812091 GTGCCATGTGGTATATAAACGTCA 59.188 41.667 0.35 0.00 37.57 4.35
4840 7232 3.846360 ACGTCAGGTATGTGAAAGTAGC 58.154 45.455 0.00 0.00 0.00 3.58
4847 7239 7.011482 GTCAGGTATGTGAAAGTAGCCTTATTG 59.989 40.741 0.00 0.00 0.00 1.90
4864 7256 8.197439 AGCCTTATTGATTTTGCCATTTACTAC 58.803 33.333 0.00 0.00 0.00 2.73
5007 7399 8.561212 ACATAAGTATTAAGCACAAACGTGAAA 58.439 29.630 0.00 0.00 32.88 2.69
5101 7494 9.772973 TGCAGTAATTATTTATGTGGTAGTAGG 57.227 33.333 0.00 0.00 0.00 3.18
5102 7495 9.774413 GCAGTAATTATTTATGTGGTAGTAGGT 57.226 33.333 0.00 0.00 0.00 3.08
5144 7537 3.077359 AGACCACACTTTAGAAGCATGC 58.923 45.455 10.51 10.51 0.00 4.06
5154 7547 6.314648 CACTTTAGAAGCATGCAGTCAGATTA 59.685 38.462 21.98 2.56 0.00 1.75
5169 7562 9.846248 GCAGTCAGATTAATTGAACAACTATTT 57.154 29.630 0.00 0.00 0.00 1.40
5494 7889 6.480651 AGTCGTGTTATATTTGTGTGTTGTGA 59.519 34.615 0.00 0.00 0.00 3.58
5598 7993 9.202273 GTTTTAAGAAATGACAACCATAATGCA 57.798 29.630 0.00 0.00 34.45 3.96
5610 8005 8.483307 ACAACCATAATGCAAAATTTGATCTC 57.517 30.769 10.26 0.00 0.00 2.75
5724 8129 5.171476 GCAGAAGGCGCTATGATAGAATTA 58.829 41.667 7.64 0.00 0.00 1.40
5825 8230 5.714806 CCTTTTTCCTTTGCATTAGGAGGTA 59.285 40.000 15.37 2.26 42.51 3.08
5826 8231 6.381133 CCTTTTTCCTTTGCATTAGGAGGTAT 59.619 38.462 15.37 0.00 42.51 2.73
5827 8232 7.559897 CCTTTTTCCTTTGCATTAGGAGGTATA 59.440 37.037 15.37 1.66 42.51 1.47
5857 8262 1.688811 GGGCCATGACCACAGGTTA 59.311 57.895 4.39 0.00 35.25 2.85
5879 8284 8.557029 GGTTATGGAGTTTATTAGTGCATGTAC 58.443 37.037 5.71 5.71 38.53 2.90
5944 8366 9.486497 TTTTGATATATTTTTCAACTGCAAGCA 57.514 25.926 0.00 0.00 37.60 3.91
6173 8602 4.393062 ACGCTTTTACCAGACAGATGATTG 59.607 41.667 0.00 0.00 0.00 2.67
6216 8646 8.811017 CCCTATCAGTGTCTAAGACATATTGAT 58.189 37.037 5.71 5.71 44.63 2.57
6239 8669 8.713971 TGATATTTATGTACCTATGGGCTATGG 58.286 37.037 0.00 0.00 35.63 2.74
6249 8679 1.066471 TGGGCTATGGCTATGCATCA 58.934 50.000 0.19 0.00 38.73 3.07
6263 8693 1.450848 CATCAGCGACTGTGGCCAT 60.451 57.895 9.72 0.00 32.61 4.40
6264 8694 1.028330 CATCAGCGACTGTGGCCATT 61.028 55.000 9.72 0.00 32.61 3.16
6265 8695 1.028330 ATCAGCGACTGTGGCCATTG 61.028 55.000 9.72 7.66 32.61 2.82
6266 8696 1.968017 CAGCGACTGTGGCCATTGT 60.968 57.895 9.72 11.47 0.00 2.71
6267 8697 1.968017 AGCGACTGTGGCCATTGTG 60.968 57.895 9.72 7.33 0.00 3.33
6268 8698 2.981560 GCGACTGTGGCCATTGTGG 61.982 63.158 9.72 13.45 41.55 4.17
6278 8708 2.269978 CCATTGTGGCTCCTTGTGG 58.730 57.895 0.00 0.00 0.00 4.17
6279 8709 0.540365 CCATTGTGGCTCCTTGTGGT 60.540 55.000 0.00 0.00 34.23 4.16
6280 8710 1.331214 CATTGTGGCTCCTTGTGGTT 58.669 50.000 0.00 0.00 34.23 3.67
6281 8711 1.688197 CATTGTGGCTCCTTGTGGTTT 59.312 47.619 0.00 0.00 34.23 3.27
6282 8712 1.110442 TTGTGGCTCCTTGTGGTTTG 58.890 50.000 0.00 0.00 34.23 2.93
6283 8713 0.033601 TGTGGCTCCTTGTGGTTTGT 60.034 50.000 0.00 0.00 34.23 2.83
6284 8714 1.213182 TGTGGCTCCTTGTGGTTTGTA 59.787 47.619 0.00 0.00 34.23 2.41
6285 8715 2.158534 TGTGGCTCCTTGTGGTTTGTAT 60.159 45.455 0.00 0.00 34.23 2.29
6286 8716 2.228822 GTGGCTCCTTGTGGTTTGTATG 59.771 50.000 0.00 0.00 34.23 2.39
6287 8717 1.818674 GGCTCCTTGTGGTTTGTATGG 59.181 52.381 0.00 0.00 34.23 2.74
6288 8718 1.202348 GCTCCTTGTGGTTTGTATGGC 59.798 52.381 0.00 0.00 34.23 4.40
6289 8719 2.795329 CTCCTTGTGGTTTGTATGGCT 58.205 47.619 0.00 0.00 34.23 4.75
6290 8720 2.489329 CTCCTTGTGGTTTGTATGGCTG 59.511 50.000 0.00 0.00 34.23 4.85
6319 8749 4.133820 GTGGTGTTGGCATGCATATACTA 58.866 43.478 21.36 9.82 0.00 1.82
6320 8750 4.024048 GTGGTGTTGGCATGCATATACTAC 60.024 45.833 21.36 17.26 0.00 2.73
6323 8753 4.452455 GTGTTGGCATGCATATACTACTCC 59.548 45.833 21.36 0.00 0.00 3.85
6324 8754 3.981071 TGGCATGCATATACTACTCCC 57.019 47.619 21.36 0.00 0.00 4.30
6325 8755 3.520696 TGGCATGCATATACTACTCCCT 58.479 45.455 21.36 0.00 0.00 4.20
6326 8756 3.909995 TGGCATGCATATACTACTCCCTT 59.090 43.478 21.36 0.00 0.00 3.95
6327 8757 4.020218 TGGCATGCATATACTACTCCCTTC 60.020 45.833 21.36 0.00 0.00 3.46
6328 8758 4.177026 GCATGCATATACTACTCCCTTCG 58.823 47.826 14.21 0.00 0.00 3.79
6329 8759 4.322049 GCATGCATATACTACTCCCTTCGT 60.322 45.833 14.21 0.00 0.00 3.85
6330 8760 5.784177 CATGCATATACTACTCCCTTCGTT 58.216 41.667 0.00 0.00 0.00 3.85
6331 8761 5.449107 TGCATATACTACTCCCTTCGTTC 57.551 43.478 0.00 0.00 0.00 3.95
6332 8762 4.280174 TGCATATACTACTCCCTTCGTTCC 59.720 45.833 0.00 0.00 0.00 3.62
6333 8763 4.523558 GCATATACTACTCCCTTCGTTCCT 59.476 45.833 0.00 0.00 0.00 3.36
6334 8764 5.709164 GCATATACTACTCCCTTCGTTCCTA 59.291 44.000 0.00 0.00 0.00 2.94
6335 8765 6.208204 GCATATACTACTCCCTTCGTTCCTAA 59.792 42.308 0.00 0.00 0.00 2.69
6336 8766 7.255730 GCATATACTACTCCCTTCGTTCCTAAA 60.256 40.741 0.00 0.00 0.00 1.85
6337 8767 8.804204 CATATACTACTCCCTTCGTTCCTAAAT 58.196 37.037 0.00 0.00 0.00 1.40
6339 8769 6.462552 ACTACTCCCTTCGTTCCTAAATAC 57.537 41.667 0.00 0.00 0.00 1.89
6340 8770 6.193504 ACTACTCCCTTCGTTCCTAAATACT 58.806 40.000 0.00 0.00 0.00 2.12
6341 8771 6.666980 ACTACTCCCTTCGTTCCTAAATACTT 59.333 38.462 0.00 0.00 0.00 2.24
6342 8772 5.731591 ACTCCCTTCGTTCCTAAATACTTG 58.268 41.667 0.00 0.00 0.00 3.16
6343 8773 5.247792 ACTCCCTTCGTTCCTAAATACTTGT 59.752 40.000 0.00 0.00 0.00 3.16
6344 8774 5.727434 TCCCTTCGTTCCTAAATACTTGTC 58.273 41.667 0.00 0.00 0.00 3.18
6345 8775 5.482878 TCCCTTCGTTCCTAAATACTTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
6346 8776 6.013984 TCCCTTCGTTCCTAAATACTTGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
6347 8777 6.653740 CCCTTCGTTCCTAAATACTTGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
6348 8778 7.148457 CCCTTCGTTCCTAAATACTTGTCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
6349 8779 7.603024 CCTTCGTTCCTAAATACTTGTCTTTCT 59.397 37.037 0.00 0.00 0.00 2.52
6350 8780 9.635520 CTTCGTTCCTAAATACTTGTCTTTCTA 57.364 33.333 0.00 0.00 0.00 2.10
6351 8781 9.635520 TTCGTTCCTAAATACTTGTCTTTCTAG 57.364 33.333 0.00 0.00 0.00 2.43
6352 8782 9.017509 TCGTTCCTAAATACTTGTCTTTCTAGA 57.982 33.333 0.00 0.00 0.00 2.43
6353 8783 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
6363 8793 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
6364 8794 9.050601 ACTTGTCTTTCTAGAGATTTCAACAAG 57.949 33.333 18.42 18.42 32.73 3.16
6365 8795 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
6366 8796 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
6367 8797 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
6368 8798 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
6369 8799 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
6370 8800 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
6371 8801 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
6372 8802 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
6373 8803 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
6375 8805 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
6376 8806 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
6377 8807 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
6378 8808 3.581755 TCAACAAGTGACTACATACGGC 58.418 45.455 0.00 0.00 0.00 5.68
6379 8809 2.273370 ACAAGTGACTACATACGGCG 57.727 50.000 4.80 4.80 0.00 6.46
6380 8810 1.542915 ACAAGTGACTACATACGGCGT 59.457 47.619 19.64 19.64 0.00 5.68
6381 8811 2.749076 ACAAGTGACTACATACGGCGTA 59.251 45.455 23.25 23.25 0.00 4.42
6382 8812 3.191162 ACAAGTGACTACATACGGCGTAA 59.809 43.478 24.81 6.81 0.00 3.18
6383 8813 4.168014 CAAGTGACTACATACGGCGTAAA 58.832 43.478 24.81 11.48 0.00 2.01
6384 8814 4.439305 AGTGACTACATACGGCGTAAAA 57.561 40.909 24.81 11.12 0.00 1.52
6385 8815 5.002464 AGTGACTACATACGGCGTAAAAT 57.998 39.130 24.81 14.27 0.00 1.82
6386 8816 4.802039 AGTGACTACATACGGCGTAAAATG 59.198 41.667 24.81 20.49 0.00 2.32
6387 8817 4.799949 GTGACTACATACGGCGTAAAATGA 59.200 41.667 24.81 1.27 0.00 2.57
6388 8818 5.038683 TGACTACATACGGCGTAAAATGAG 58.961 41.667 24.81 17.76 0.00 2.90
6389 8819 5.002464 ACTACATACGGCGTAAAATGAGT 57.998 39.130 24.81 18.30 0.00 3.41
6390 8820 4.802039 ACTACATACGGCGTAAAATGAGTG 59.198 41.667 24.81 17.30 0.00 3.51
6391 8821 3.852286 ACATACGGCGTAAAATGAGTGA 58.148 40.909 24.81 0.00 0.00 3.41
6392 8822 4.247258 ACATACGGCGTAAAATGAGTGAA 58.753 39.130 24.81 0.00 0.00 3.18
6393 8823 4.873827 ACATACGGCGTAAAATGAGTGAAT 59.126 37.500 24.81 0.20 0.00 2.57
6394 8824 5.006358 ACATACGGCGTAAAATGAGTGAATC 59.994 40.000 24.81 0.00 0.00 2.52
6395 8825 3.596214 ACGGCGTAAAATGAGTGAATCT 58.404 40.909 12.58 0.00 0.00 2.40
6396 8826 4.751060 ACGGCGTAAAATGAGTGAATCTA 58.249 39.130 12.58 0.00 0.00 1.98
6397 8827 4.565564 ACGGCGTAAAATGAGTGAATCTAC 59.434 41.667 12.58 0.00 0.00 2.59
6398 8828 4.565166 CGGCGTAAAATGAGTGAATCTACA 59.435 41.667 0.00 0.00 0.00 2.74
6399 8829 5.500290 CGGCGTAAAATGAGTGAATCTACAC 60.500 44.000 0.00 0.00 40.60 2.90
6437 8867 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
6438 8868 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
6439 8869 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
6440 8870 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
6441 8871 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
6442 8872 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
6443 8873 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
6444 8874 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
6445 8875 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
6446 8876 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
6447 8877 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
6448 8878 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
6449 8879 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
6450 8880 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
6451 8881 5.538053 TGTTGAGTCCATTTGAAATGCCTAA 59.462 36.000 12.26 1.26 0.00 2.69
6452 8882 6.041409 TGTTGAGTCCATTTGAAATGCCTAAA 59.959 34.615 12.26 6.88 0.00 1.85
6453 8883 6.662865 TGAGTCCATTTGAAATGCCTAAAA 57.337 33.333 12.26 0.00 0.00 1.52
6454 8884 7.060383 TGAGTCCATTTGAAATGCCTAAAAA 57.940 32.000 12.26 0.00 0.00 1.94
6455 8885 7.153985 TGAGTCCATTTGAAATGCCTAAAAAG 58.846 34.615 12.26 0.00 0.00 2.27
6456 8886 7.015098 TGAGTCCATTTGAAATGCCTAAAAAGA 59.985 33.333 12.26 0.00 0.00 2.52
6457 8887 7.154656 AGTCCATTTGAAATGCCTAAAAAGAC 58.845 34.615 12.26 10.86 0.00 3.01
6458 8888 6.928492 GTCCATTTGAAATGCCTAAAAAGACA 59.072 34.615 12.26 0.00 0.00 3.41
6459 8889 7.440856 GTCCATTTGAAATGCCTAAAAAGACAA 59.559 33.333 12.26 0.00 0.00 3.18
6460 8890 7.656948 TCCATTTGAAATGCCTAAAAAGACAAG 59.343 33.333 12.26 0.00 0.00 3.16
6461 8891 7.442062 CCATTTGAAATGCCTAAAAAGACAAGT 59.558 33.333 12.26 0.00 0.00 3.16
6462 8892 9.474920 CATTTGAAATGCCTAAAAAGACAAGTA 57.525 29.630 4.82 0.00 0.00 2.24
6466 8896 9.474920 TGAAATGCCTAAAAAGACAAGTATTTG 57.525 29.630 0.00 0.00 40.24 2.32
6467 8897 8.831715 AAATGCCTAAAAAGACAAGTATTTGG 57.168 30.769 2.81 0.00 38.66 3.28
6468 8898 6.339587 TGCCTAAAAAGACAAGTATTTGGG 57.660 37.500 2.81 0.00 38.66 4.12
6469 8899 6.071984 TGCCTAAAAAGACAAGTATTTGGGA 58.928 36.000 2.81 0.82 35.98 4.37
6470 8900 6.551601 TGCCTAAAAAGACAAGTATTTGGGAA 59.448 34.615 2.81 0.00 35.98 3.97
6471 8901 6.866770 GCCTAAAAAGACAAGTATTTGGGAAC 59.133 38.462 2.81 0.00 35.98 3.62
6472 8902 7.081976 CCTAAAAAGACAAGTATTTGGGAACG 58.918 38.462 2.81 0.00 35.98 3.95
6473 8903 5.447624 AAAAGACAAGTATTTGGGAACGG 57.552 39.130 2.81 0.00 38.66 4.44
6474 8904 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
6475 8905 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
6476 8906 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
6477 8907 2.640826 ACAAGTATTTGGGAACGGAGGA 59.359 45.455 2.81 0.00 38.66 3.71
6478 8908 3.073356 ACAAGTATTTGGGAACGGAGGAA 59.927 43.478 2.81 0.00 38.66 3.36
6479 8909 3.629142 AGTATTTGGGAACGGAGGAAG 57.371 47.619 0.00 0.00 0.00 3.46
6480 8910 2.910977 AGTATTTGGGAACGGAGGAAGT 59.089 45.455 0.00 0.00 0.00 3.01
6481 8911 4.098894 AGTATTTGGGAACGGAGGAAGTA 58.901 43.478 0.00 0.00 0.00 2.24
6482 8912 4.720273 AGTATTTGGGAACGGAGGAAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
6483 8913 4.586306 ATTTGGGAACGGAGGAAGTATT 57.414 40.909 0.00 0.00 0.00 1.89
6484 8914 3.622166 TTGGGAACGGAGGAAGTATTC 57.378 47.619 0.00 0.00 46.67 1.75
6514 8944 2.509052 TGTCGCTGTCTACATATGCC 57.491 50.000 1.58 0.00 0.00 4.40
6577 9007 2.022764 TTATGTCACGTCCCAGCATG 57.977 50.000 0.00 0.00 0.00 4.06
6686 9121 1.634702 TTTTGTGGTCGTTTTGCTGC 58.365 45.000 0.00 0.00 0.00 5.25
6714 9149 0.530744 GAGCCATGACACGTGTCCTA 59.469 55.000 38.12 25.27 44.15 2.94
6761 9196 3.040175 AGCGACGACGACGAGACA 61.040 61.111 22.94 0.00 42.66 3.41
7251 9689 2.219674 GCAGATTACTTTGCTCGATCGG 59.780 50.000 16.41 7.26 37.35 4.18
7252 9690 2.219674 CAGATTACTTTGCTCGATCGGC 59.780 50.000 16.41 17.41 0.00 5.54
7256 9694 2.802667 CTTTGCTCGATCGGCGGTG 61.803 63.158 16.41 7.51 41.33 4.94
7267 9705 0.890542 TCGGCGGTGTGTACTGTACT 60.891 55.000 17.98 0.00 35.54 2.73
7268 9706 0.731514 CGGCGGTGTGTACTGTACTG 60.732 60.000 17.98 1.48 35.54 2.74
7269 9707 0.316204 GGCGGTGTGTACTGTACTGT 59.684 55.000 17.98 10.46 35.54 3.55
7270 9708 1.541147 GGCGGTGTGTACTGTACTGTA 59.459 52.381 17.98 8.40 35.54 2.74
7271 9709 2.589014 GCGGTGTGTACTGTACTGTAC 58.411 52.381 27.19 27.19 42.10 2.90
7272 9710 2.843077 CGGTGTGTACTGTACTGTACG 58.157 52.381 27.61 17.18 44.01 3.67
7273 9711 2.224079 CGGTGTGTACTGTACTGTACGT 59.776 50.000 27.61 14.54 44.01 3.57
7314 9752 4.454161 TGTGGTGATTAATTCTTGTGTCGG 59.546 41.667 0.00 0.00 0.00 4.79
7400 9843 5.790593 ACATAACACAACACGGAACTATCT 58.209 37.500 0.00 0.00 0.00 1.98
7484 11166 2.290260 TGTCGGCTGTTCCTGATCATTT 60.290 45.455 0.00 0.00 0.00 2.32
7521 11224 2.674357 ACGTTTAACGAGCAAACAGTGT 59.326 40.909 24.57 0.00 46.05 3.55
7573 11301 0.844221 AAAAGCTGCCTCCTCTCCCT 60.844 55.000 0.00 0.00 0.00 4.20
7574 11302 0.043334 AAAGCTGCCTCCTCTCCCTA 59.957 55.000 0.00 0.00 0.00 3.53
7575 11303 0.398381 AAGCTGCCTCCTCTCCCTAG 60.398 60.000 0.00 0.00 0.00 3.02
7576 11304 2.506957 GCTGCCTCCTCTCCCTAGC 61.507 68.421 0.00 0.00 0.00 3.42
7577 11305 1.232792 CTGCCTCCTCTCCCTAGCT 59.767 63.158 0.00 0.00 0.00 3.32
7580 11308 0.756294 GCCTCCTCTCCCTAGCTTTC 59.244 60.000 0.00 0.00 0.00 2.62
7583 11311 2.178106 CCTCCTCTCCCTAGCTTTCCTA 59.822 54.545 0.00 0.00 0.00 2.94
7585 11313 3.639561 CTCCTCTCCCTAGCTTTCCTAAC 59.360 52.174 0.00 0.00 0.00 2.34
7605 11334 0.533032 AAGCCGCCTCTCTTACTCAC 59.467 55.000 0.00 0.00 0.00 3.51
7626 11355 6.453092 TCACTGAGGCTTGTAAACTAGTTAC 58.547 40.000 8.92 8.18 42.24 2.50
7692 11450 1.821216 TTTTAAGCTGGGAAGAGGCG 58.179 50.000 0.00 0.00 0.00 5.52
7712 11470 1.640428 GCTTATTTTTCAAGCCGCCC 58.360 50.000 0.00 0.00 42.08 6.13
7748 11525 4.893241 CGAAAAAGCGCACGTCTT 57.107 50.000 11.47 0.00 0.00 3.01
7781 11558 1.671054 CTCGCACCCCAATCGTGTT 60.671 57.895 0.00 0.00 33.61 3.32
7787 11564 0.887387 ACCCCAATCGTGTTGTTCGG 60.887 55.000 3.40 2.80 0.00 4.30
7792 11569 0.534203 AATCGTGTTGTTCGGGCAGT 60.534 50.000 0.00 0.00 0.00 4.40
7831 11608 2.091499 ACTCGGGTTCCTTTTTCCCTTT 60.091 45.455 0.00 0.00 39.10 3.11
7834 11611 2.755208 CGGGTTCCTTTTTCCCTTTCCT 60.755 50.000 0.00 0.00 39.10 3.36
7857 11634 2.033448 GAATGTCACGGCACCCCA 59.967 61.111 0.00 0.00 0.00 4.96
7884 11661 2.672996 GCACCCATCGCACACCTT 60.673 61.111 0.00 0.00 0.00 3.50
7892 11669 0.616111 ATCGCACACCTTCTCTCCCT 60.616 55.000 0.00 0.00 0.00 4.20
7905 11682 4.576330 TCTCTCCCTTGAATTTCTTCCC 57.424 45.455 0.00 0.00 0.00 3.97
7935 11712 9.594478 ACAAAGAAAAACGAAAAAGATAACCAT 57.406 25.926 0.00 0.00 0.00 3.55
7991 11768 3.068560 CGTTGACTCCCGTTGGATTTTA 58.931 45.455 0.00 0.00 40.80 1.52
8037 11814 2.997315 CACGTCAGCTCCTGGGGA 60.997 66.667 0.00 0.00 31.51 4.81
8069 11846 5.044179 TGGGAAGTGGGAACTGAATGAATAT 60.044 40.000 0.00 0.00 0.00 1.28
8072 11849 8.383175 GGGAAGTGGGAACTGAATGAATATATA 58.617 37.037 0.00 0.00 0.00 0.86
8144 11923 2.036992 CTCTCATTCCCCTCAATCCTCG 59.963 54.545 0.00 0.00 0.00 4.63
8145 11924 1.765314 CTCATTCCCCTCAATCCTCGT 59.235 52.381 0.00 0.00 0.00 4.18
8158 11937 1.116308 TCCTCGTGAGTCAACCAACA 58.884 50.000 0.00 0.00 0.00 3.33
8172 11951 0.878523 CCAACACAAACTCCGCTCGA 60.879 55.000 0.00 0.00 0.00 4.04
8174 11953 0.179094 AACACAAACTCCGCTCGACA 60.179 50.000 0.00 0.00 0.00 4.35
8181 11960 0.320771 ACTCCGCTCGACAATTTGCT 60.321 50.000 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 5.104193 ACAGCCAGAATTCAAGGTATGATCT 60.104 40.000 20.53 8.15 38.03 2.75
126 127 7.958053 AACTTTATTCTACACGTAAGCACTT 57.042 32.000 0.00 0.00 45.62 3.16
127 128 7.095355 CCAAACTTTATTCTACACGTAAGCACT 60.095 37.037 0.00 0.00 45.62 4.40
128 129 7.013529 CCAAACTTTATTCTACACGTAAGCAC 58.986 38.462 0.00 0.00 45.62 4.40
129 130 6.707161 ACCAAACTTTATTCTACACGTAAGCA 59.293 34.615 0.00 0.00 45.62 3.91
130 131 7.125536 ACCAAACTTTATTCTACACGTAAGC 57.874 36.000 0.00 0.00 45.62 3.09
132 133 8.090214 AGCTACCAAACTTTATTCTACACGTAA 58.910 33.333 0.00 0.00 0.00 3.18
133 134 7.605449 AGCTACCAAACTTTATTCTACACGTA 58.395 34.615 0.00 0.00 0.00 3.57
134 135 6.461640 AGCTACCAAACTTTATTCTACACGT 58.538 36.000 0.00 0.00 0.00 4.49
135 136 6.588756 TGAGCTACCAAACTTTATTCTACACG 59.411 38.462 0.00 0.00 0.00 4.49
136 137 7.900782 TGAGCTACCAAACTTTATTCTACAC 57.099 36.000 0.00 0.00 0.00 2.90
180 264 3.756434 AGAGAGAGAGAGAGAAACGTTGG 59.244 47.826 0.00 0.00 0.00 3.77
184 268 4.759782 AGAGAGAGAGAGAGAGAGAAACG 58.240 47.826 0.00 0.00 0.00 3.60
189 273 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
191 275 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
192 276 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
193 277 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
194 278 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
195 279 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
196 280 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
197 281 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
198 282 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
199 283 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
200 284 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
201 285 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
202 286 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
203 287 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
204 288 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
205 289 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
206 290 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
207 291 6.303054 TCTAGAGAGAGAGAGAGAGAGAGAG 58.697 48.000 0.00 0.00 0.00 3.20
208 292 6.267492 TCTAGAGAGAGAGAGAGAGAGAGA 57.733 45.833 0.00 0.00 0.00 3.10
235 319 5.218885 CACCAAATTGCGTCAATCAAACTA 58.781 37.500 5.70 0.00 32.43 2.24
277 375 7.442666 GGTTATATGAGGAGCCAAGTTTCTTAG 59.557 40.741 0.00 0.00 0.00 2.18
384 493 3.776347 TTGGCGCGTTTGGGGAAGA 62.776 57.895 8.43 0.00 0.00 2.87
385 494 2.356818 TTTTGGCGCGTTTGGGGAAG 62.357 55.000 8.43 0.00 0.00 3.46
386 495 1.956629 TTTTTGGCGCGTTTGGGGAA 61.957 50.000 8.43 0.00 0.00 3.97
387 496 2.356818 CTTTTTGGCGCGTTTGGGGA 62.357 55.000 8.43 0.00 0.00 4.81
388 497 1.953642 CTTTTTGGCGCGTTTGGGG 60.954 57.895 8.43 0.00 0.00 4.96
389 498 0.808060 AACTTTTTGGCGCGTTTGGG 60.808 50.000 8.43 0.00 0.00 4.12
390 499 0.300193 CAACTTTTTGGCGCGTTTGG 59.700 50.000 8.43 0.00 0.00 3.28
391 500 0.314979 GCAACTTTTTGGCGCGTTTG 60.315 50.000 8.43 0.00 32.81 2.93
395 504 1.386412 CTTATGCAACTTTTTGGCGCG 59.614 47.619 0.00 0.00 32.81 6.86
416 525 4.989044 ACGTTCGACATTGGTTTCTTTTT 58.011 34.783 0.00 0.00 0.00 1.94
451 573 0.096976 CAGAGCGGGTGCAAAATACG 59.903 55.000 0.00 0.00 46.23 3.06
479 601 0.610174 TGACAGGCAAGCAGGAGTAG 59.390 55.000 0.00 0.00 0.00 2.57
487 609 2.162408 GGATTAACTGTGACAGGCAAGC 59.838 50.000 17.92 12.12 35.51 4.01
596 718 5.180868 TCACCTTCAGACTACGTCTTAAGTC 59.819 44.000 7.93 7.93 41.37 3.01
603 725 3.760537 GTGATCACCTTCAGACTACGTC 58.239 50.000 15.31 0.00 0.00 4.34
641 763 3.082619 CCTGACCCAGGTCCTAACA 57.917 57.895 14.19 0.00 45.82 2.41
650 772 1.396653 GAATTGGATGCCTGACCCAG 58.603 55.000 0.00 0.00 0.00 4.45
651 773 0.033208 GGAATTGGATGCCTGACCCA 60.033 55.000 0.00 0.00 0.00 4.51
652 774 0.033208 TGGAATTGGATGCCTGACCC 60.033 55.000 0.00 0.00 0.00 4.46
654 776 0.743097 GCTGGAATTGGATGCCTGAC 59.257 55.000 0.00 0.00 0.00 3.51
655 777 0.332293 TGCTGGAATTGGATGCCTGA 59.668 50.000 0.00 0.00 0.00 3.86
656 778 0.458669 GTGCTGGAATTGGATGCCTG 59.541 55.000 0.00 0.00 0.00 4.85
697 2693 4.154347 GGAGGAGGTGGCGAGCAG 62.154 72.222 0.00 0.00 0.00 4.24
698 2694 2.589610 ATAGGAGGAGGTGGCGAGCA 62.590 60.000 0.00 0.00 0.00 4.26
701 2697 1.217183 AGTAATAGGAGGAGGTGGCGA 59.783 52.381 0.00 0.00 0.00 5.54
702 2698 1.705873 AGTAATAGGAGGAGGTGGCG 58.294 55.000 0.00 0.00 0.00 5.69
703 2699 2.898612 GGTAGTAATAGGAGGAGGTGGC 59.101 54.545 0.00 0.00 0.00 5.01
704 2700 3.155501 CGGTAGTAATAGGAGGAGGTGG 58.844 54.545 0.00 0.00 0.00 4.61
705 2701 2.557490 GCGGTAGTAATAGGAGGAGGTG 59.443 54.545 0.00 0.00 0.00 4.00
706 2702 2.490535 GGCGGTAGTAATAGGAGGAGGT 60.491 54.545 0.00 0.00 0.00 3.85
707 2703 2.169330 GGCGGTAGTAATAGGAGGAGG 58.831 57.143 0.00 0.00 0.00 4.30
708 2704 2.169330 GGGCGGTAGTAATAGGAGGAG 58.831 57.143 0.00 0.00 0.00 3.69
709 2705 1.203100 GGGGCGGTAGTAATAGGAGGA 60.203 57.143 0.00 0.00 0.00 3.71
799 2795 1.075600 GAGGAGGTGGAGGAGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
800 2796 1.075600 GGAGGAGGTGGAGGAGGAG 60.076 68.421 0.00 0.00 0.00 3.69
801 2797 1.547755 AGGAGGAGGTGGAGGAGGA 60.548 63.158 0.00 0.00 0.00 3.71
802 2798 1.075600 GAGGAGGAGGTGGAGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
803 2799 1.454847 CGAGGAGGAGGTGGAGGAG 60.455 68.421 0.00 0.00 0.00 3.69
804 2800 2.212794 GACGAGGAGGAGGTGGAGGA 62.213 65.000 0.00 0.00 0.00 3.71
805 2801 1.755008 GACGAGGAGGAGGTGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
806 2802 2.115911 CGACGAGGAGGAGGTGGAG 61.116 68.421 0.00 0.00 0.00 3.86
807 2803 2.045242 CGACGAGGAGGAGGTGGA 60.045 66.667 0.00 0.00 0.00 4.02
808 2804 2.361357 ACGACGAGGAGGAGGTGG 60.361 66.667 0.00 0.00 0.00 4.61
809 2805 1.377463 AGACGACGAGGAGGAGGTG 60.377 63.158 0.00 0.00 0.00 4.00
810 2806 1.377463 CAGACGACGAGGAGGAGGT 60.377 63.158 0.00 0.00 0.00 3.85
951 2947 2.581709 AGTACTGTACTAGGCTCCCTGT 59.418 50.000 18.42 0.00 37.23 4.00
1160 3156 7.056635 AGCTGCTAATTGGTTATTATGACTGT 58.943 34.615 0.00 0.00 0.00 3.55
1231 3227 4.460263 ACATGCTCCTAACAAACACAAGA 58.540 39.130 0.00 0.00 0.00 3.02
1232 3228 4.836125 ACATGCTCCTAACAAACACAAG 57.164 40.909 0.00 0.00 0.00 3.16
1234 3230 4.460263 AGAACATGCTCCTAACAAACACA 58.540 39.130 0.00 0.00 0.00 3.72
1235 3231 5.215160 CAAGAACATGCTCCTAACAAACAC 58.785 41.667 0.00 0.00 0.00 3.32
1248 3252 9.661187 CAATCTAATCTAATCACAAGAACATGC 57.339 33.333 0.00 0.00 0.00 4.06
1274 3278 1.523758 AGCATGTTTGACTCGAACCC 58.476 50.000 6.69 0.00 0.00 4.11
1318 3322 2.027837 AGCATTTGAAAGCCCACAATCC 60.028 45.455 0.00 0.00 0.00 3.01
1338 3342 8.295288 GCATCCATCCTTGATAATTGAGTTAAG 58.705 37.037 0.00 0.00 0.00 1.85
1342 3346 5.075493 GGCATCCATCCTTGATAATTGAGT 58.925 41.667 0.00 0.00 0.00 3.41
1363 3367 1.130373 CCATGTACACATCAACACGGC 59.870 52.381 0.00 0.00 33.61 5.68
1572 3583 9.403110 CTTGCATATATACTCCAATTGAAAAGC 57.597 33.333 7.12 0.00 0.00 3.51
1689 3700 0.600255 GCCAGTTCATATCCGGACGG 60.600 60.000 6.12 3.96 0.00 4.79
1729 3740 0.623723 TGTGAATGGAGGGGGTTAGC 59.376 55.000 0.00 0.00 0.00 3.09
1779 3790 7.541091 ACACTAAAATGCGTCTATATACATCCG 59.459 37.037 0.00 0.00 0.00 4.18
1781 3792 9.193133 ACACACTAAAATGCGTCTATATACATC 57.807 33.333 0.00 0.00 0.00 3.06
1853 3867 7.546316 CCATTCACAAATATGAGATGTTTTGCA 59.454 33.333 0.00 0.00 33.43 4.08
1855 3869 9.297586 CTCCATTCACAAATATGAGATGTTTTG 57.702 33.333 0.00 0.00 35.66 2.44
1856 3870 8.472413 CCTCCATTCACAAATATGAGATGTTTT 58.528 33.333 0.00 0.00 30.18 2.43
1857 3871 7.069085 CCCTCCATTCACAAATATGAGATGTTT 59.931 37.037 0.00 0.00 30.18 2.83
1860 3874 6.301486 TCCCTCCATTCACAAATATGAGATG 58.699 40.000 0.00 0.00 30.18 2.90
1861 3875 6.520021 TCCCTCCATTCACAAATATGAGAT 57.480 37.500 0.00 0.00 30.18 2.75
1863 3877 4.518211 GCTCCCTCCATTCACAAATATGAG 59.482 45.833 0.00 0.00 0.00 2.90
1864 3878 4.166725 AGCTCCCTCCATTCACAAATATGA 59.833 41.667 0.00 0.00 0.00 2.15
1866 3880 4.803329 AGCTCCCTCCATTCACAAATAT 57.197 40.909 0.00 0.00 0.00 1.28
1980 4338 4.403734 TCCAAAACTAATGGTCCACCTTC 58.596 43.478 0.00 0.00 39.09 3.46
2041 4399 8.798975 ACTCTTCCCTGATATAACTTGGATTA 57.201 34.615 0.00 0.00 0.00 1.75
2155 4513 6.525628 GCATCTCATTATTGGCATATTTGACG 59.474 38.462 0.00 0.00 31.31 4.35
2159 4517 8.644216 TCAAAGCATCTCATTATTGGCATATTT 58.356 29.630 0.00 0.00 0.00 1.40
2359 4717 9.927668 CCAATTTCATGTTAACAAGGAAATACT 57.072 29.630 31.02 22.09 40.15 2.12
2360 4718 8.655970 GCCAATTTCATGTTAACAAGGAAATAC 58.344 33.333 31.02 24.22 40.15 1.89
2390 4748 4.380841 AATATGACCGTTAGTGCTTCGA 57.619 40.909 0.00 0.00 0.00 3.71
2461 4823 2.983907 TCCGTGTGTGTTTTCAGGTA 57.016 45.000 0.00 0.00 0.00 3.08
2462 4824 2.116827 TTCCGTGTGTGTTTTCAGGT 57.883 45.000 0.00 0.00 0.00 4.00
2463 4825 3.708563 ATTTCCGTGTGTGTTTTCAGG 57.291 42.857 0.00 0.00 0.00 3.86
2497 4859 4.558898 GCGACAAGTAATATGGATCGGAGT 60.559 45.833 0.00 0.00 0.00 3.85
2528 4899 8.257306 ACCAAAATAAATGTTCTGAAGTTGTGT 58.743 29.630 0.00 0.00 0.00 3.72
2529 4900 8.647143 ACCAAAATAAATGTTCTGAAGTTGTG 57.353 30.769 0.00 0.00 0.00 3.33
2537 4908 9.528018 ACAACACTTACCAAAATAAATGTTCTG 57.472 29.630 0.00 0.00 0.00 3.02
2587 4962 5.437289 TCACATTTCCAACACAGATCAAC 57.563 39.130 0.00 0.00 0.00 3.18
2700 5075 3.606204 AGGTTGGCCTGGTTCCAT 58.394 55.556 3.32 0.00 45.05 3.41
2874 5249 2.966309 GAAGTTGAAGGTGCGGCGG 61.966 63.158 9.78 0.00 0.00 6.13
3073 5448 1.003233 GATCTTGACGGTTCCCTGGTT 59.997 52.381 0.00 0.00 0.00 3.67
3138 5513 3.490759 GTGCCGATGACGCTGTGG 61.491 66.667 0.00 0.00 38.29 4.17
3282 5657 1.134670 ACCTTCTTGTAGATCTGCGCC 60.135 52.381 4.18 0.00 0.00 6.53
3321 5696 3.407046 GACCCGGTAGAAGGCGTCG 62.407 68.421 0.00 0.00 0.00 5.12
3533 5908 1.376424 ATGTCAGTCCTTGCTGCCG 60.376 57.895 0.00 0.00 36.49 5.69
3585 5960 5.692115 TCTGCACTTTGAGGAATATGGTA 57.308 39.130 0.00 0.00 0.00 3.25
3591 5966 3.265791 GACGATCTGCACTTTGAGGAAT 58.734 45.455 0.00 0.00 0.00 3.01
3635 6014 1.336755 GTCTGGGAAATGTTGCAACGT 59.663 47.619 23.79 21.32 0.00 3.99
3677 6056 5.221823 TGTCAGGTCAAGATTTCCATGTACA 60.222 40.000 0.00 0.00 0.00 2.90
3722 6101 2.612471 CCTCGAATGGCCTGATCAGATC 60.612 54.545 24.62 15.06 0.00 2.75
3725 6104 0.755079 TCCTCGAATGGCCTGATCAG 59.245 55.000 16.24 16.24 0.00 2.90
3776 6155 2.970639 GCCACCTCTGTCGCTGTA 59.029 61.111 0.00 0.00 0.00 2.74
3785 6164 1.760086 CATCTCCCTCGCCACCTCT 60.760 63.158 0.00 0.00 0.00 3.69
3861 6240 1.422531 ACCAGCCTCATGATCTCCTC 58.577 55.000 0.00 0.00 0.00 3.71
3935 6314 3.743396 GCTCCTCATTGTCGTCATTATCC 59.257 47.826 0.00 0.00 0.00 2.59
3965 6344 4.140876 GGGGAAGAGGAGAGGTAGTAGAAT 60.141 50.000 0.00 0.00 0.00 2.40
3998 6377 0.888736 TGCCACAATGAGACCCGTTG 60.889 55.000 0.00 0.00 45.12 4.10
4018 6397 0.907704 ACCTGATGTTGTCGGCCCTA 60.908 55.000 0.00 0.00 31.43 3.53
4070 6449 9.573133 GATCACAACTCAAAAGAAGAAGAAAAA 57.427 29.630 0.00 0.00 0.00 1.94
4075 6454 9.770503 CATATGATCACAACTCAAAAGAAGAAG 57.229 33.333 0.00 0.00 0.00 2.85
4076 6455 9.288576 ACATATGATCACAACTCAAAAGAAGAA 57.711 29.630 10.38 0.00 0.00 2.52
4077 6456 8.853077 ACATATGATCACAACTCAAAAGAAGA 57.147 30.769 10.38 0.00 0.00 2.87
4078 6457 8.724229 TGACATATGATCACAACTCAAAAGAAG 58.276 33.333 10.38 0.00 0.00 2.85
4079 6458 8.620116 TGACATATGATCACAACTCAAAAGAA 57.380 30.769 10.38 0.00 0.00 2.52
4080 6459 7.148356 GCTGACATATGATCACAACTCAAAAGA 60.148 37.037 10.38 0.00 0.00 2.52
4081 6460 6.965500 GCTGACATATGATCACAACTCAAAAG 59.035 38.462 10.38 0.00 0.00 2.27
4088 6471 4.610007 GCGATGCTGACATATGATCACAAC 60.610 45.833 10.38 8.21 36.35 3.32
4213 6600 5.163972 CGCACCACCATTTCAATTGTAAATG 60.164 40.000 22.85 22.85 41.77 2.32
4214 6601 4.928615 CGCACCACCATTTCAATTGTAAAT 59.071 37.500 5.13 7.53 0.00 1.40
4328 6715 8.049721 ACATAGTGCTCTAGCTAAATCCTTTTT 58.950 33.333 3.26 0.00 42.66 1.94
4329 6716 7.569240 ACATAGTGCTCTAGCTAAATCCTTTT 58.431 34.615 3.26 0.00 42.66 2.27
4330 6717 7.130681 ACATAGTGCTCTAGCTAAATCCTTT 57.869 36.000 3.26 0.00 42.66 3.11
4331 6718 6.739331 ACATAGTGCTCTAGCTAAATCCTT 57.261 37.500 3.26 0.00 42.66 3.36
4332 6719 6.739331 AACATAGTGCTCTAGCTAAATCCT 57.261 37.500 3.26 0.00 42.66 3.24
4333 6720 6.763610 ACAAACATAGTGCTCTAGCTAAATCC 59.236 38.462 3.26 0.00 42.66 3.01
4334 6721 7.306283 CGACAAACATAGTGCTCTAGCTAAATC 60.306 40.741 3.26 0.00 42.66 2.17
4335 6722 6.477033 CGACAAACATAGTGCTCTAGCTAAAT 59.523 38.462 3.26 0.00 42.66 1.40
4336 6723 5.805486 CGACAAACATAGTGCTCTAGCTAAA 59.195 40.000 3.26 0.00 42.66 1.85
4337 6724 5.124936 TCGACAAACATAGTGCTCTAGCTAA 59.875 40.000 3.26 0.00 42.66 3.09
4338 6725 4.638865 TCGACAAACATAGTGCTCTAGCTA 59.361 41.667 3.26 0.00 42.66 3.32
4339 6726 3.444034 TCGACAAACATAGTGCTCTAGCT 59.556 43.478 3.26 0.00 42.66 3.32
4340 6727 3.548268 GTCGACAAACATAGTGCTCTAGC 59.452 47.826 11.55 0.00 42.50 3.42
4341 6728 4.987832 AGTCGACAAACATAGTGCTCTAG 58.012 43.478 19.50 0.00 0.00 2.43
4342 6729 6.150641 AGTTAGTCGACAAACATAGTGCTCTA 59.849 38.462 19.50 0.00 0.00 2.43
4458 6845 9.743057 GCAATTTAATACATTAGGCATTACACA 57.257 29.630 0.00 0.00 0.00 3.72
4459 6846 9.743057 TGCAATTTAATACATTAGGCATTACAC 57.257 29.630 0.00 0.00 0.00 2.90
4520 6911 5.860611 TCTAAGACAAGAATTTTGGGACGA 58.139 37.500 0.00 0.00 0.00 4.20
4521 6912 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4523 6914 9.449719 GACTAATCTAAGACAAGAATTTTGGGA 57.550 33.333 5.68 0.00 0.00 4.37
4624 7015 6.021030 TGCCCTAAATATATTACTCCGTCCT 58.979 40.000 0.00 0.00 0.00 3.85
4626 7017 6.812160 CACTGCCCTAAATATATTACTCCGTC 59.188 42.308 0.00 0.00 0.00 4.79
4778 7170 6.053005 ACACGTGGTGAGAAATCTAGAAAAA 58.947 36.000 21.57 0.00 36.96 1.94
4779 7171 5.607477 ACACGTGGTGAGAAATCTAGAAAA 58.393 37.500 21.57 0.00 36.96 2.29
4804 7196 5.607477 ACCTGACGTTTATATACCACATGG 58.393 41.667 0.00 0.00 42.17 3.66
4824 7216 7.195374 TCAATAAGGCTACTTTCACATACCT 57.805 36.000 0.00 0.00 38.14 3.08
4840 7232 9.520204 CTGTAGTAAATGGCAAAATCAATAAGG 57.480 33.333 0.00 0.00 0.00 2.69
4886 7278 5.856156 TCCACAAAACCGTACTTTCTATCA 58.144 37.500 0.00 0.00 0.00 2.15
4888 7280 7.166167 AGAATCCACAAAACCGTACTTTCTAT 58.834 34.615 0.00 0.00 0.00 1.98
4943 7335 4.456280 TTCGTATTGTGCAGTCTGAGAT 57.544 40.909 3.32 0.00 0.00 2.75
5056 7448 5.706833 ACTGCAATCTGACATTGTATCAACA 59.293 36.000 0.00 0.00 0.00 3.33
5097 7490 3.975168 TTCCCAAACAGAGCTACCTAC 57.025 47.619 0.00 0.00 0.00 3.18
5100 7493 8.035984 GTCTATATATTCCCAAACAGAGCTACC 58.964 40.741 0.00 0.00 0.00 3.18
5101 7494 8.035984 GGTCTATATATTCCCAAACAGAGCTAC 58.964 40.741 0.00 0.00 0.00 3.58
5102 7495 7.733047 TGGTCTATATATTCCCAAACAGAGCTA 59.267 37.037 7.98 0.00 32.13 3.32
5154 7547 7.840342 TGTTGCACAAAATAGTTGTTCAATT 57.160 28.000 7.38 0.00 37.72 2.32
5190 7584 8.698973 TGGAACATTGGTGAGTAATCTAAAAA 57.301 30.769 0.00 0.00 0.00 1.94
5212 7606 9.513906 CATAACCAATGTAATATACCACATGGA 57.486 33.333 4.53 0.00 35.59 3.41
5326 7720 9.716531 ACAAACCTTACTTTCTAGTATGTAACC 57.283 33.333 4.39 0.00 36.76 2.85
5345 7739 9.816787 TTTAGGTAATAAAGAATCCACAAACCT 57.183 29.630 0.00 0.00 37.40 3.50
5473 7868 9.624697 ATCATTCACAACACACAAATATAACAC 57.375 29.630 0.00 0.00 0.00 3.32
5636 8040 4.095932 AGTCGTCGCATGATACTTACTTCA 59.904 41.667 0.00 0.00 0.00 3.02
5648 8052 0.733150 TCTAGTGGAGTCGTCGCATG 59.267 55.000 0.00 0.00 0.00 4.06
5689 8093 0.761187 CCTTCTGCTAGCCCTATGCA 59.239 55.000 13.29 0.00 44.83 3.96
5714 8119 6.422333 TGTTGATTGGCTGGTAATTCTATCA 58.578 36.000 0.00 0.00 0.00 2.15
5825 8230 6.075315 GGTCATGGCCCCTAAGTATTTTTAT 58.925 40.000 4.49 0.00 0.00 1.40
5826 8231 5.044030 TGGTCATGGCCCCTAAGTATTTTTA 60.044 40.000 15.27 0.00 0.00 1.52
5827 8232 4.264623 TGGTCATGGCCCCTAAGTATTTTT 60.265 41.667 15.27 0.00 0.00 1.94
5857 8262 7.657761 GCTAGTACATGCACTAATAAACTCCAT 59.342 37.037 7.22 0.00 30.77 3.41
5879 8284 2.857152 CTCTTTCAACGCTAGCAGCTAG 59.143 50.000 23.40 23.40 39.60 3.42
5944 8366 4.823989 GCAATGCTTGGTCCTTATGTAGAT 59.176 41.667 0.00 0.00 0.00 1.98
5998 8421 9.616156 TCCTAAAAAGTGTAACATGTAGTTTCA 57.384 29.630 0.00 0.00 41.43 2.69
6173 8602 2.590821 AGGGTCTTTGATATGCATGCC 58.409 47.619 16.68 0.00 0.00 4.40
6216 8646 6.676632 AGCCATAGCCCATAGGTACATAAATA 59.323 38.462 0.00 0.00 41.25 1.40
6239 8669 0.580578 CACAGTCGCTGATGCATAGC 59.419 55.000 12.77 8.54 39.64 2.97
6249 8679 1.968017 CACAATGGCCACAGTCGCT 60.968 57.895 8.16 0.00 0.00 4.93
6263 8693 1.110442 CAAACCACAAGGAGCCACAA 58.890 50.000 0.00 0.00 38.69 3.33
6264 8694 0.033601 ACAAACCACAAGGAGCCACA 60.034 50.000 0.00 0.00 38.69 4.17
6265 8695 1.975660 TACAAACCACAAGGAGCCAC 58.024 50.000 0.00 0.00 38.69 5.01
6266 8696 2.513753 CATACAAACCACAAGGAGCCA 58.486 47.619 0.00 0.00 38.69 4.75
6267 8697 1.818674 CCATACAAACCACAAGGAGCC 59.181 52.381 0.00 0.00 38.69 4.70
6268 8698 1.202348 GCCATACAAACCACAAGGAGC 59.798 52.381 0.00 0.00 38.69 4.70
6269 8699 2.489329 CAGCCATACAAACCACAAGGAG 59.511 50.000 0.00 0.00 38.69 3.69
6270 8700 2.158534 ACAGCCATACAAACCACAAGGA 60.159 45.455 0.00 0.00 38.69 3.36
6271 8701 2.238521 ACAGCCATACAAACCACAAGG 58.761 47.619 0.00 0.00 42.21 3.61
6272 8702 3.641648 CAACAGCCATACAAACCACAAG 58.358 45.455 0.00 0.00 0.00 3.16
6273 8703 2.223923 GCAACAGCCATACAAACCACAA 60.224 45.455 0.00 0.00 0.00 3.33
6274 8704 1.339610 GCAACAGCCATACAAACCACA 59.660 47.619 0.00 0.00 0.00 4.17
6275 8705 1.339610 TGCAACAGCCATACAAACCAC 59.660 47.619 0.00 0.00 0.00 4.16
6276 8706 1.697284 TGCAACAGCCATACAAACCA 58.303 45.000 0.00 0.00 0.00 3.67
6277 8707 2.029110 ACATGCAACAGCCATACAAACC 60.029 45.455 0.00 0.00 0.00 3.27
6278 8708 2.988493 CACATGCAACAGCCATACAAAC 59.012 45.455 0.00 0.00 0.00 2.93
6279 8709 2.029200 CCACATGCAACAGCCATACAAA 60.029 45.455 0.00 0.00 0.00 2.83
6280 8710 1.545136 CCACATGCAACAGCCATACAA 59.455 47.619 0.00 0.00 0.00 2.41
6281 8711 1.175654 CCACATGCAACAGCCATACA 58.824 50.000 0.00 0.00 0.00 2.29
6282 8712 1.135315 CACCACATGCAACAGCCATAC 60.135 52.381 0.00 0.00 0.00 2.39
6283 8713 1.175654 CACCACATGCAACAGCCATA 58.824 50.000 0.00 0.00 0.00 2.74
6284 8714 0.828762 ACACCACATGCAACAGCCAT 60.829 50.000 0.00 0.00 0.00 4.40
6285 8715 1.042003 AACACCACATGCAACAGCCA 61.042 50.000 0.00 0.00 0.00 4.75
6286 8716 0.598158 CAACACCACATGCAACAGCC 60.598 55.000 0.00 0.00 0.00 4.85
6287 8717 0.598158 CCAACACCACATGCAACAGC 60.598 55.000 0.00 0.00 0.00 4.40
6288 8718 0.598158 GCCAACACCACATGCAACAG 60.598 55.000 0.00 0.00 0.00 3.16
6289 8719 1.325476 TGCCAACACCACATGCAACA 61.325 50.000 0.00 0.00 0.00 3.33
6290 8720 0.033781 ATGCCAACACCACATGCAAC 59.966 50.000 0.00 0.00 35.30 4.17
6319 8749 5.247792 ACAAGTATTTAGGAACGAAGGGAGT 59.752 40.000 0.00 0.00 0.00 3.85
6320 8750 5.731591 ACAAGTATTTAGGAACGAAGGGAG 58.268 41.667 0.00 0.00 0.00 4.30
6323 8753 7.603024 AGAAAGACAAGTATTTAGGAACGAAGG 59.397 37.037 0.00 0.00 0.00 3.46
6324 8754 8.535690 AGAAAGACAAGTATTTAGGAACGAAG 57.464 34.615 0.00 0.00 0.00 3.79
6325 8755 9.635520 CTAGAAAGACAAGTATTTAGGAACGAA 57.364 33.333 0.00 0.00 0.00 3.85
6326 8756 9.017509 TCTAGAAAGACAAGTATTTAGGAACGA 57.982 33.333 0.00 0.00 0.00 3.85
6327 8757 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
6338 8768 8.964476 TTGTTGAAATCTCTAGAAAGACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
6339 8769 9.050601 ACTTGTTGAAATCTCTAGAAAGACAAG 57.949 33.333 17.75 17.75 33.18 3.16
6340 8770 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
6341 8771 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
6342 8772 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
6343 8773 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
6344 8774 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
6345 8775 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
6346 8776 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
6347 8777 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
6348 8778 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
6349 8779 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
6350 8780 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
6351 8781 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
6352 8782 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
6353 8783 6.672357 GCCGTATGTAGTCACTTGTTGAAATC 60.672 42.308 0.00 0.00 35.39 2.17
6354 8784 5.121768 GCCGTATGTAGTCACTTGTTGAAAT 59.878 40.000 0.00 0.00 35.39 2.17
6355 8785 4.449743 GCCGTATGTAGTCACTTGTTGAAA 59.550 41.667 0.00 0.00 35.39 2.69
6356 8786 3.991773 GCCGTATGTAGTCACTTGTTGAA 59.008 43.478 0.00 0.00 35.39 2.69
6357 8787 3.581755 GCCGTATGTAGTCACTTGTTGA 58.418 45.455 0.00 0.00 0.00 3.18
6358 8788 2.344441 CGCCGTATGTAGTCACTTGTTG 59.656 50.000 0.00 0.00 0.00 3.33
6359 8789 2.029649 ACGCCGTATGTAGTCACTTGTT 60.030 45.455 0.00 0.00 0.00 2.83
6360 8790 1.542915 ACGCCGTATGTAGTCACTTGT 59.457 47.619 0.00 0.00 0.00 3.16
6361 8791 2.273370 ACGCCGTATGTAGTCACTTG 57.727 50.000 0.00 0.00 0.00 3.16
6362 8792 4.439305 TTTACGCCGTATGTAGTCACTT 57.561 40.909 0.00 0.00 0.00 3.16
6363 8793 4.439305 TTTTACGCCGTATGTAGTCACT 57.561 40.909 0.00 0.00 0.00 3.41
6364 8794 4.799949 TCATTTTACGCCGTATGTAGTCAC 59.200 41.667 0.00 0.00 0.00 3.67
6365 8795 4.996344 TCATTTTACGCCGTATGTAGTCA 58.004 39.130 0.00 0.00 0.00 3.41
6366 8796 5.039333 ACTCATTTTACGCCGTATGTAGTC 58.961 41.667 0.00 0.00 0.00 2.59
6367 8797 4.802039 CACTCATTTTACGCCGTATGTAGT 59.198 41.667 0.00 0.00 0.00 2.73
6368 8798 5.038683 TCACTCATTTTACGCCGTATGTAG 58.961 41.667 0.00 0.00 0.00 2.74
6369 8799 4.996344 TCACTCATTTTACGCCGTATGTA 58.004 39.130 0.00 0.00 0.00 2.29
6370 8800 3.852286 TCACTCATTTTACGCCGTATGT 58.148 40.909 0.00 0.00 0.00 2.29
6371 8801 4.850859 TTCACTCATTTTACGCCGTATG 57.149 40.909 0.00 0.00 0.00 2.39
6372 8802 5.357257 AGATTCACTCATTTTACGCCGTAT 58.643 37.500 0.00 0.00 0.00 3.06
6373 8803 4.751060 AGATTCACTCATTTTACGCCGTA 58.249 39.130 0.00 0.00 0.00 4.02
6374 8804 3.596214 AGATTCACTCATTTTACGCCGT 58.404 40.909 0.00 0.00 0.00 5.68
6375 8805 4.565166 TGTAGATTCACTCATTTTACGCCG 59.435 41.667 0.00 0.00 0.00 6.46
6376 8806 5.581085 AGTGTAGATTCACTCATTTTACGCC 59.419 40.000 0.00 0.00 44.07 5.68
6377 8807 6.648725 AGTGTAGATTCACTCATTTTACGC 57.351 37.500 0.00 0.00 44.07 4.42
6416 8846 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
6417 8847 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
6419 8849 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
6420 8850 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
6421 8851 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
6422 8852 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
6423 8853 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
6424 8854 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
6425 8855 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
6426 8856 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
6427 8857 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
6428 8858 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
6429 8859 6.662865 TTTAGGCATTTCAAATGGACTCAA 57.337 33.333 12.14 0.00 0.00 3.02
6430 8860 6.662865 TTTTAGGCATTTCAAATGGACTCA 57.337 33.333 12.14 0.00 0.00 3.41
6431 8861 7.329471 GTCTTTTTAGGCATTTCAAATGGACTC 59.671 37.037 12.14 0.00 0.00 3.36
6432 8862 7.154656 GTCTTTTTAGGCATTTCAAATGGACT 58.845 34.615 12.14 3.08 0.00 3.85
6433 8863 6.928492 TGTCTTTTTAGGCATTTCAAATGGAC 59.072 34.615 12.14 8.23 0.00 4.02
6434 8864 7.060383 TGTCTTTTTAGGCATTTCAAATGGA 57.940 32.000 12.14 0.00 0.00 3.41
6435 8865 7.442062 ACTTGTCTTTTTAGGCATTTCAAATGG 59.558 33.333 12.14 0.00 0.00 3.16
6436 8866 8.369218 ACTTGTCTTTTTAGGCATTTCAAATG 57.631 30.769 5.68 5.68 0.00 2.32
6440 8870 9.474920 CAAATACTTGTCTTTTTAGGCATTTCA 57.525 29.630 0.00 0.00 0.00 2.69
6441 8871 8.925700 CCAAATACTTGTCTTTTTAGGCATTTC 58.074 33.333 0.00 0.00 0.00 2.17
6442 8872 7.877612 CCCAAATACTTGTCTTTTTAGGCATTT 59.122 33.333 0.00 0.00 0.00 2.32
6443 8873 7.234577 TCCCAAATACTTGTCTTTTTAGGCATT 59.765 33.333 0.00 0.00 0.00 3.56
6444 8874 6.723977 TCCCAAATACTTGTCTTTTTAGGCAT 59.276 34.615 0.00 0.00 0.00 4.40
6445 8875 6.071984 TCCCAAATACTTGTCTTTTTAGGCA 58.928 36.000 0.00 0.00 0.00 4.75
6446 8876 6.584185 TCCCAAATACTTGTCTTTTTAGGC 57.416 37.500 0.00 0.00 0.00 3.93
6447 8877 7.081976 CGTTCCCAAATACTTGTCTTTTTAGG 58.918 38.462 0.00 0.00 0.00 2.69
6448 8878 7.040961 TCCGTTCCCAAATACTTGTCTTTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
6449 8879 6.771749 TCCGTTCCCAAATACTTGTCTTTTTA 59.228 34.615 0.00 0.00 0.00 1.52
6450 8880 5.595133 TCCGTTCCCAAATACTTGTCTTTTT 59.405 36.000 0.00 0.00 0.00 1.94
6451 8881 5.134661 TCCGTTCCCAAATACTTGTCTTTT 58.865 37.500 0.00 0.00 0.00 2.27
6452 8882 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
6453 8883 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
6454 8884 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
6455 8885 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
6456 8886 2.640826 TCCTCCGTTCCCAAATACTTGT 59.359 45.455 0.00 0.00 0.00 3.16
6457 8887 3.343941 TCCTCCGTTCCCAAATACTTG 57.656 47.619 0.00 0.00 0.00 3.16
6458 8888 3.329814 ACTTCCTCCGTTCCCAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
6459 8889 2.910977 ACTTCCTCCGTTCCCAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
6460 8890 3.345508 ACTTCCTCCGTTCCCAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
6461 8891 5.677567 GAATACTTCCTCCGTTCCCAAATA 58.322 41.667 0.00 0.00 0.00 1.40
6462 8892 4.524053 GAATACTTCCTCCGTTCCCAAAT 58.476 43.478 0.00 0.00 0.00 2.32
6463 8893 3.618019 CGAATACTTCCTCCGTTCCCAAA 60.618 47.826 0.00 0.00 0.00 3.28
6464 8894 2.093869 CGAATACTTCCTCCGTTCCCAA 60.094 50.000 0.00 0.00 0.00 4.12
6465 8895 1.479323 CGAATACTTCCTCCGTTCCCA 59.521 52.381 0.00 0.00 0.00 4.37
6466 8896 1.479730 ACGAATACTTCCTCCGTTCCC 59.520 52.381 0.00 0.00 0.00 3.97
6467 8897 2.955477 ACGAATACTTCCTCCGTTCC 57.045 50.000 0.00 0.00 0.00 3.62
6468 8898 3.788163 CGTAACGAATACTTCCTCCGTTC 59.212 47.826 0.00 0.00 42.40 3.95
6469 8899 3.762779 CGTAACGAATACTTCCTCCGTT 58.237 45.455 0.00 0.00 44.22 4.44
6470 8900 2.478539 GCGTAACGAATACTTCCTCCGT 60.479 50.000 0.00 0.00 34.74 4.69
6471 8901 2.114825 GCGTAACGAATACTTCCTCCG 58.885 52.381 0.00 0.00 31.96 4.63
6514 8944 6.154445 GTCAAATGGATATGCTAGCAAATGG 58.846 40.000 23.54 4.92 0.00 3.16
6528 8958 7.613585 TGTGCTTTTTATCATGTCAAATGGAT 58.386 30.769 0.00 0.00 0.00 3.41
6577 9007 9.553064 GATGACTATGATATATCCCATTTCCAC 57.447 37.037 10.25 0.00 0.00 4.02
6614 9049 2.288666 TCCATTATGCTGTCCTTTCGC 58.711 47.619 0.00 0.00 0.00 4.70
6686 9121 0.321564 TGTCATGGCTCAACGAAGGG 60.322 55.000 0.00 0.00 0.00 3.95
6714 9149 3.687698 GCGTAATCTACACCAACCACAAT 59.312 43.478 0.00 0.00 0.00 2.71
7251 9689 2.589014 GTACAGTACAGTACACACCGC 58.411 52.381 20.17 0.00 42.97 5.68
7252 9690 2.224079 ACGTACAGTACAGTACACACCG 59.776 50.000 23.35 14.01 43.49 4.94
7256 9694 5.348724 TGCTACTACGTACAGTACAGTACAC 59.651 44.000 23.35 5.51 43.49 2.90
7267 9705 3.887110 ACCTGCATATGCTACTACGTACA 59.113 43.478 27.13 3.19 42.66 2.90
7268 9706 4.227538 CACCTGCATATGCTACTACGTAC 58.772 47.826 27.13 0.00 42.66 3.67
7269 9707 3.887110 ACACCTGCATATGCTACTACGTA 59.113 43.478 27.13 4.65 42.66 3.57
7270 9708 2.693591 ACACCTGCATATGCTACTACGT 59.306 45.455 27.13 14.07 42.66 3.57
7271 9709 3.052745 CACACCTGCATATGCTACTACG 58.947 50.000 27.13 13.49 42.66 3.51
7272 9710 3.804325 CACACACCTGCATATGCTACTAC 59.196 47.826 27.13 0.00 42.66 2.73
7273 9711 3.181466 CCACACACCTGCATATGCTACTA 60.181 47.826 27.13 7.25 42.66 1.82
7314 9752 5.706916 CAGGGGTATATATGTACACACGAC 58.293 45.833 13.21 0.00 29.38 4.34
7507 11189 0.461339 AACGGACACTGTTTGCTCGT 60.461 50.000 0.00 0.00 38.35 4.18
7521 11224 2.002018 AAAGAACTGGCCCCAACGGA 62.002 55.000 0.00 0.00 0.00 4.69
7558 11286 2.506957 GCTAGGGAGAGGAGGCAGC 61.507 68.421 0.00 0.00 0.00 5.25
7559 11287 0.398381 AAGCTAGGGAGAGGAGGCAG 60.398 60.000 0.00 0.00 0.00 4.85
7560 11288 0.043334 AAAGCTAGGGAGAGGAGGCA 59.957 55.000 0.00 0.00 0.00 4.75
7564 11292 3.012502 TGTTAGGAAAGCTAGGGAGAGGA 59.987 47.826 0.00 0.00 0.00 3.71
7569 11297 3.629142 GCTTGTTAGGAAAGCTAGGGA 57.371 47.619 1.01 0.00 45.31 4.20
7576 11304 1.087501 GAGGCGGCTTGTTAGGAAAG 58.912 55.000 14.76 0.00 0.00 2.62
7577 11305 0.690762 AGAGGCGGCTTGTTAGGAAA 59.309 50.000 14.76 0.00 0.00 3.13
7580 11308 0.250513 AAGAGAGGCGGCTTGTTAGG 59.749 55.000 14.76 0.00 0.00 2.69
7583 11311 0.977395 AGTAAGAGAGGCGGCTTGTT 59.023 50.000 14.76 9.71 0.00 2.83
7585 11313 0.532573 TGAGTAAGAGAGGCGGCTTG 59.467 55.000 14.76 0.00 0.00 4.01
7605 11334 5.706916 TCGTAACTAGTTTACAAGCCTCAG 58.293 41.667 14.49 0.00 40.30 3.35
7626 11355 8.591312 GTTGAGATTTCTAAATCAGTTCTCTCG 58.409 37.037 15.76 0.00 45.59 4.04
7645 11403 3.694566 GCCGTCCCTAATTTTGTTGAGAT 59.305 43.478 0.00 0.00 0.00 2.75
7731 11489 0.042535 TGAAGACGTGCGCTTTTTCG 60.043 50.000 9.73 8.36 0.00 3.46
7748 11525 1.967535 CGAGACCAGGTGCTCTTGA 59.032 57.895 0.00 0.00 0.00 3.02
7804 11581 2.760387 AAAGGAACCCGAGTCGCGTC 62.760 60.000 7.12 0.00 38.67 5.19
7808 11585 1.154197 GGAAAAAGGAACCCGAGTCG 58.846 55.000 5.29 5.29 0.00 4.18
7831 11608 0.172578 CCGTGACATTCTGCGTAGGA 59.827 55.000 0.00 0.00 0.00 2.94
7834 11611 1.011968 GTGCCGTGACATTCTGCGTA 61.012 55.000 0.00 0.00 0.00 4.42
7867 11644 2.672996 AAGGTGTGCGATGGGTGC 60.673 61.111 0.00 0.00 0.00 5.01
7884 11661 3.267031 GGGGAAGAAATTCAAGGGAGAGA 59.733 47.826 0.00 0.00 0.00 3.10
7892 11669 1.988293 TGTGCGGGGAAGAAATTCAA 58.012 45.000 0.00 0.00 0.00 2.69
7905 11682 4.324936 TCTTTTTCGTTTTTCTTTGTGCGG 59.675 37.500 0.00 0.00 0.00 5.69
7935 11712 4.634199 ACCCTTAAAAATCTGACGTTCGA 58.366 39.130 0.00 0.00 0.00 3.71
7991 11768 0.108992 TCGCGTTAAGATCCGTGCTT 60.109 50.000 5.77 0.00 34.75 3.91
8037 11814 1.189524 TCCCACTTCCCATCGAACGT 61.190 55.000 0.00 0.00 0.00 3.99
8069 11846 2.038033 CGGCGAGGGGAAGGAAAATATA 59.962 50.000 0.00 0.00 0.00 0.86
8072 11849 1.077716 CGGCGAGGGGAAGGAAAAT 60.078 57.895 0.00 0.00 0.00 1.82
8144 11923 3.181500 GGAGTTTGTGTTGGTTGACTCAC 60.181 47.826 0.00 0.00 36.21 3.51
8145 11924 3.013921 GGAGTTTGTGTTGGTTGACTCA 58.986 45.455 0.00 0.00 36.21 3.41
8158 11937 1.878953 AATTGTCGAGCGGAGTTTGT 58.121 45.000 0.00 0.00 0.00 2.83
8172 11951 0.813184 CCATCTCGCCAGCAAATTGT 59.187 50.000 0.00 0.00 0.00 2.71
8174 11953 1.386533 CTCCATCTCGCCAGCAAATT 58.613 50.000 0.00 0.00 0.00 1.82
8198 11977 4.374702 GTGCAGCGAGTTGTGCCG 62.375 66.667 0.00 0.00 39.04 5.69
8210 11989 4.776322 TGGCCGGGATTCGTGCAG 62.776 66.667 2.18 0.00 36.99 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.