Multiple sequence alignment - TraesCS5B01G145000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G145000 chr5B 100.000 2945 0 0 1 2945 272166003 272168947 0.000000e+00 5439
1 TraesCS5B01G145000 chr5A 91.260 2723 146 33 287 2945 322478091 322480785 0.000000e+00 3626
2 TraesCS5B01G145000 chr5D 94.816 1736 70 7 287 2011 232850283 232848557 0.000000e+00 2689
3 TraesCS5B01G145000 chr5D 89.282 961 63 17 2018 2945 232848516 232847563 0.000000e+00 1168
4 TraesCS5B01G145000 chr4D 81.231 991 173 11 985 1972 101506177 101505197 0.000000e+00 787
5 TraesCS5B01G145000 chr4A 80.645 992 177 12 985 1972 473765641 473766621 0.000000e+00 754
6 TraesCS5B01G145000 chr3B 94.718 284 12 3 4 285 751844213 751843931 3.480000e-119 438
7 TraesCS5B01G145000 chr3B 94.662 281 12 3 1 279 404354706 404354985 1.620000e-117 433
8 TraesCS5B01G145000 chr2B 94.681 282 12 3 1 280 538801927 538802207 4.510000e-118 435
9 TraesCS5B01G145000 chr2B 94.643 280 13 2 3 280 357094029 357093750 1.620000e-117 433
10 TraesCS5B01G145000 chr2B 93.617 282 16 2 1 280 679155176 679155457 1.260000e-113 420
11 TraesCS5B01G145000 chr3A 94.326 282 14 2 1 280 209407864 209408145 5.830000e-117 431
12 TraesCS5B01G145000 chr4B 94.014 284 15 2 1 282 385954391 385954108 2.100000e-116 429
13 TraesCS5B01G145000 chr1A 94.265 279 14 2 4 280 60804938 60804660 2.710000e-115 425
14 TraesCS5B01G145000 chr7D 93.950 281 15 2 1 279 219836736 219837016 9.760000e-115 424


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G145000 chr5B 272166003 272168947 2944 False 5439.0 5439 100.000 1 2945 1 chr5B.!!$F1 2944
1 TraesCS5B01G145000 chr5A 322478091 322480785 2694 False 3626.0 3626 91.260 287 2945 1 chr5A.!!$F1 2658
2 TraesCS5B01G145000 chr5D 232847563 232850283 2720 True 1928.5 2689 92.049 287 2945 2 chr5D.!!$R1 2658
3 TraesCS5B01G145000 chr4D 101505197 101506177 980 True 787.0 787 81.231 985 1972 1 chr4D.!!$R1 987
4 TraesCS5B01G145000 chr4A 473765641 473766621 980 False 754.0 754 80.645 985 1972 1 chr4A.!!$F1 987

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 244 0.034896 ACGATTATGATGGGTCGGGC 59.965 55.0 0.0 0.0 38.33 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2064 2117 0.512952 CGAACCAAAAGAGTGCCTCG 59.487 55.0 0.0 0.0 35.36 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 5.799827 TGGCCCAATATGTAAAAATAGGC 57.200 39.130 0.00 0.00 37.14 3.93
46 47 5.463154 TGGCCCAATATGTAAAAATAGGCT 58.537 37.500 0.00 0.00 37.98 4.58
47 48 5.902431 TGGCCCAATATGTAAAAATAGGCTT 59.098 36.000 0.00 0.00 37.98 4.35
48 49 7.069986 TGGCCCAATATGTAAAAATAGGCTTA 58.930 34.615 0.00 0.00 37.98 3.09
49 50 7.565398 TGGCCCAATATGTAAAAATAGGCTTAA 59.435 33.333 0.00 0.00 37.98 1.85
50 51 8.425703 GGCCCAATATGTAAAAATAGGCTTAAA 58.574 33.333 0.00 0.00 37.98 1.52
51 52 9.825109 GCCCAATATGTAAAAATAGGCTTAAAA 57.175 29.630 0.00 0.00 35.00 1.52
59 60 9.396938 TGTAAAAATAGGCTTAAAAACGCTTAC 57.603 29.630 0.00 0.00 0.00 2.34
60 61 9.616634 GTAAAAATAGGCTTAAAAACGCTTACT 57.383 29.630 0.00 0.00 0.00 2.24
61 62 8.515473 AAAAATAGGCTTAAAAACGCTTACTG 57.485 30.769 0.00 0.00 0.00 2.74
62 63 3.554259 AGGCTTAAAAACGCTTACTGC 57.446 42.857 0.00 0.00 38.57 4.40
75 76 4.003519 GCTTACTGCGTCAAATAACAGG 57.996 45.455 0.00 0.00 34.40 4.00
76 77 3.727970 GCTTACTGCGTCAAATAACAGGC 60.728 47.826 0.00 0.00 34.40 4.85
77 78 2.185004 ACTGCGTCAAATAACAGGCT 57.815 45.000 0.00 0.00 34.40 4.58
78 79 3.328382 ACTGCGTCAAATAACAGGCTA 57.672 42.857 0.00 0.00 34.40 3.93
79 80 3.670625 ACTGCGTCAAATAACAGGCTAA 58.329 40.909 0.00 0.00 34.40 3.09
80 81 4.069304 ACTGCGTCAAATAACAGGCTAAA 58.931 39.130 0.00 0.00 34.40 1.85
81 82 4.517453 ACTGCGTCAAATAACAGGCTAAAA 59.483 37.500 0.00 0.00 34.40 1.52
82 83 5.183140 ACTGCGTCAAATAACAGGCTAAAAT 59.817 36.000 0.00 0.00 34.40 1.82
83 84 6.373216 ACTGCGTCAAATAACAGGCTAAAATA 59.627 34.615 0.00 0.00 34.40 1.40
84 85 7.067008 ACTGCGTCAAATAACAGGCTAAAATAT 59.933 33.333 0.00 0.00 34.40 1.28
85 86 7.192913 TGCGTCAAATAACAGGCTAAAATATG 58.807 34.615 0.00 0.00 0.00 1.78
86 87 6.142320 GCGTCAAATAACAGGCTAAAATATGC 59.858 38.462 0.00 0.00 0.00 3.14
87 88 7.192913 CGTCAAATAACAGGCTAAAATATGCA 58.807 34.615 0.00 0.00 0.00 3.96
88 89 7.376866 CGTCAAATAACAGGCTAAAATATGCAG 59.623 37.037 0.00 0.00 0.00 4.41
89 90 7.168135 GTCAAATAACAGGCTAAAATATGCAGC 59.832 37.037 0.00 0.00 34.48 5.25
94 95 2.800881 GCTAAAATATGCAGCCCACC 57.199 50.000 0.00 0.00 0.00 4.61
95 96 1.001378 GCTAAAATATGCAGCCCACCG 60.001 52.381 0.00 0.00 0.00 4.94
96 97 2.297701 CTAAAATATGCAGCCCACCGT 58.702 47.619 0.00 0.00 0.00 4.83
97 98 0.817013 AAAATATGCAGCCCACCGTG 59.183 50.000 0.00 0.00 0.00 4.94
98 99 1.666209 AAATATGCAGCCCACCGTGC 61.666 55.000 0.00 0.00 40.29 5.34
99 100 2.556840 AATATGCAGCCCACCGTGCT 62.557 55.000 0.00 0.00 40.54 4.40
100 101 1.695114 ATATGCAGCCCACCGTGCTA 61.695 55.000 0.00 0.00 40.54 3.49
101 102 1.904990 TATGCAGCCCACCGTGCTAA 61.905 55.000 0.00 0.00 40.54 3.09
102 103 2.671619 GCAGCCCACCGTGCTAAA 60.672 61.111 0.00 0.00 36.81 1.85
103 104 2.978018 GCAGCCCACCGTGCTAAAC 61.978 63.158 0.00 0.00 36.81 2.01
128 129 2.265424 GTGCCGGCCCGTTTACTA 59.735 61.111 26.77 0.00 0.00 1.82
129 130 1.375780 GTGCCGGCCCGTTTACTAA 60.376 57.895 26.77 0.00 0.00 2.24
130 131 0.745486 GTGCCGGCCCGTTTACTAAT 60.745 55.000 26.77 0.00 0.00 1.73
131 132 0.035247 TGCCGGCCCGTTTACTAATT 60.035 50.000 26.77 0.00 0.00 1.40
132 133 0.379316 GCCGGCCCGTTTACTAATTG 59.621 55.000 18.11 0.00 0.00 2.32
133 134 1.018910 CCGGCCCGTTTACTAATTGG 58.981 55.000 0.85 0.00 0.00 3.16
134 135 1.407162 CCGGCCCGTTTACTAATTGGA 60.407 52.381 0.85 0.00 0.00 3.53
135 136 2.567985 CGGCCCGTTTACTAATTGGAT 58.432 47.619 0.00 0.00 0.00 3.41
136 137 2.546789 CGGCCCGTTTACTAATTGGATC 59.453 50.000 0.00 0.00 0.00 3.36
137 138 2.546789 GGCCCGTTTACTAATTGGATCG 59.453 50.000 0.00 0.00 0.00 3.69
138 139 3.200483 GCCCGTTTACTAATTGGATCGT 58.800 45.455 0.00 0.00 0.00 3.73
139 140 3.001939 GCCCGTTTACTAATTGGATCGTG 59.998 47.826 0.00 0.00 0.00 4.35
140 141 3.001939 CCCGTTTACTAATTGGATCGTGC 59.998 47.826 0.00 0.00 0.00 5.34
141 142 3.001939 CCGTTTACTAATTGGATCGTGCC 59.998 47.826 0.00 0.00 0.00 5.01
142 143 3.869246 CGTTTACTAATTGGATCGTGCCT 59.131 43.478 0.00 0.00 0.00 4.75
143 144 4.260212 CGTTTACTAATTGGATCGTGCCTG 60.260 45.833 0.00 0.00 0.00 4.85
144 145 2.332063 ACTAATTGGATCGTGCCTGG 57.668 50.000 0.00 0.00 0.00 4.45
145 146 1.134098 ACTAATTGGATCGTGCCTGGG 60.134 52.381 0.00 0.00 0.00 4.45
146 147 0.465460 TAATTGGATCGTGCCTGGGC 60.465 55.000 4.43 4.43 42.35 5.36
147 148 3.721370 ATTGGATCGTGCCTGGGCC 62.721 63.158 9.28 0.00 41.09 5.80
149 150 4.864334 GGATCGTGCCTGGGCCTG 62.864 72.222 4.53 3.68 41.09 4.85
150 151 4.864334 GATCGTGCCTGGGCCTGG 62.864 72.222 24.13 24.13 41.09 4.45
191 192 3.447040 GGCACGGCCCGTATAGTA 58.553 61.111 9.25 0.00 44.06 1.82
192 193 1.741525 GGCACGGCCCGTATAGTAA 59.258 57.895 9.25 0.00 44.06 2.24
193 194 0.319405 GGCACGGCCCGTATAGTAAT 59.681 55.000 9.25 0.00 44.06 1.89
194 195 1.670967 GGCACGGCCCGTATAGTAATC 60.671 57.143 9.25 0.00 44.06 1.75
195 196 1.973138 CACGGCCCGTATAGTAATCG 58.027 55.000 9.25 0.00 38.32 3.34
196 197 1.267806 CACGGCCCGTATAGTAATCGT 59.732 52.381 9.25 0.00 38.32 3.73
197 198 1.267806 ACGGCCCGTATAGTAATCGTG 59.732 52.381 7.20 0.00 38.73 4.35
198 199 1.706443 GGCCCGTATAGTAATCGTGC 58.294 55.000 0.00 0.00 0.00 5.34
199 200 1.670967 GGCCCGTATAGTAATCGTGCC 60.671 57.143 7.70 7.70 40.23 5.01
200 201 1.670967 GCCCGTATAGTAATCGTGCCC 60.671 57.143 0.00 0.00 0.00 5.36
201 202 1.891150 CCCGTATAGTAATCGTGCCCT 59.109 52.381 0.00 0.00 0.00 5.19
202 203 2.352421 CCCGTATAGTAATCGTGCCCTG 60.352 54.545 0.00 0.00 0.00 4.45
203 204 2.555325 CCGTATAGTAATCGTGCCCTGA 59.445 50.000 0.00 0.00 0.00 3.86
204 205 3.562505 CGTATAGTAATCGTGCCCTGAC 58.437 50.000 0.00 0.00 0.00 3.51
205 206 2.795175 ATAGTAATCGTGCCCTGACG 57.205 50.000 0.00 0.00 40.83 4.35
206 207 0.742505 TAGTAATCGTGCCCTGACGG 59.257 55.000 0.00 0.00 39.88 4.79
232 233 3.749981 GGGCCAGGCACGATTATG 58.250 61.111 15.19 0.00 0.00 1.90
233 234 1.148273 GGGCCAGGCACGATTATGA 59.852 57.895 15.19 0.00 0.00 2.15
234 235 0.250901 GGGCCAGGCACGATTATGAT 60.251 55.000 15.19 0.00 0.00 2.45
235 236 0.877071 GGCCAGGCACGATTATGATG 59.123 55.000 15.19 0.00 0.00 3.07
236 237 0.877071 GCCAGGCACGATTATGATGG 59.123 55.000 6.55 0.00 33.35 3.51
237 238 1.527034 CCAGGCACGATTATGATGGG 58.473 55.000 0.00 0.00 0.00 4.00
238 239 1.202806 CCAGGCACGATTATGATGGGT 60.203 52.381 0.00 0.00 0.00 4.51
239 240 2.146342 CAGGCACGATTATGATGGGTC 58.854 52.381 0.00 0.00 0.00 4.46
240 241 1.148310 GGCACGATTATGATGGGTCG 58.852 55.000 0.00 0.00 39.78 4.79
241 242 1.148310 GCACGATTATGATGGGTCGG 58.852 55.000 0.00 0.00 38.33 4.79
242 243 1.795768 CACGATTATGATGGGTCGGG 58.204 55.000 0.00 0.00 38.33 5.14
243 244 0.034896 ACGATTATGATGGGTCGGGC 59.965 55.000 0.00 0.00 38.33 6.13
244 245 0.673644 CGATTATGATGGGTCGGGCC 60.674 60.000 0.00 0.00 0.00 5.80
245 246 0.673644 GATTATGATGGGTCGGGCCG 60.674 60.000 22.51 22.51 38.44 6.13
246 247 1.415672 ATTATGATGGGTCGGGCCGT 61.416 55.000 27.32 5.58 38.44 5.68
247 248 2.318519 TTATGATGGGTCGGGCCGTG 62.319 60.000 27.32 0.00 38.44 4.94
280 281 3.396951 CCCGTTTGGCCAGGTATAG 57.603 57.895 5.11 0.00 0.00 1.31
281 282 0.818040 CCCGTTTGGCCAGGTATAGC 60.818 60.000 5.11 0.00 0.00 2.97
326 327 4.457496 CGCGTGAGGCCCACAGAT 62.457 66.667 20.10 0.00 45.98 2.90
367 368 1.548357 TTCACTCAGCTCAGCCTCCC 61.548 60.000 0.00 0.00 0.00 4.30
368 369 2.121385 ACTCAGCTCAGCCTCCCA 59.879 61.111 0.00 0.00 0.00 4.37
369 370 2.289532 ACTCAGCTCAGCCTCCCAC 61.290 63.158 0.00 0.00 0.00 4.61
370 371 1.988956 CTCAGCTCAGCCTCCCACT 60.989 63.158 0.00 0.00 0.00 4.00
371 372 1.958902 CTCAGCTCAGCCTCCCACTC 61.959 65.000 0.00 0.00 0.00 3.51
372 373 2.686835 AGCTCAGCCTCCCACTCC 60.687 66.667 0.00 0.00 0.00 3.85
429 430 2.264813 TGTATGCCTCGCGTCTTTAAC 58.735 47.619 5.77 0.00 0.00 2.01
528 537 1.066303 CCCGTTCTCCTTCGATCTCAG 59.934 57.143 0.00 0.00 0.00 3.35
532 541 1.669604 TCTCCTTCGATCTCAGTCCG 58.330 55.000 0.00 0.00 0.00 4.79
551 560 0.912006 GCAAACCCTCTCCTCCTCCT 60.912 60.000 0.00 0.00 0.00 3.69
660 669 3.629087 TCTTACTCTCTCGGGGGTAAAG 58.371 50.000 0.00 0.00 0.00 1.85
666 675 4.254492 CTCTCTCGGGGGTAAAGAAAAAG 58.746 47.826 0.00 0.00 0.00 2.27
811 820 3.447586 CGTCCTTGTAGAGAATCCCAAGA 59.552 47.826 0.00 0.00 43.39 3.02
895 905 4.120331 GCGCCAATCTTTGCCGCT 62.120 61.111 8.16 0.00 0.00 5.52
896 906 2.202518 CGCCAATCTTTGCCGCTG 60.203 61.111 0.00 0.00 0.00 5.18
970 980 0.689623 CTCCTGGCTTTCTCACCACT 59.310 55.000 0.00 0.00 0.00 4.00
983 993 1.203300 TCACCACTCCTGGATTCCTGA 60.203 52.381 10.93 3.62 40.55 3.86
1036 1046 1.536073 CGTCTGCCTCCTCCAACTGA 61.536 60.000 0.00 0.00 0.00 3.41
1045 1055 3.008375 CCTCCTCCAACTGATGTTCTTGA 59.992 47.826 0.00 0.00 33.52 3.02
1049 1059 3.405831 TCCAACTGATGTTCTTGAGCTG 58.594 45.455 0.00 0.00 33.52 4.24
1257 1270 5.367945 AAGGTTTGTCTCAGTACTTCCAA 57.632 39.130 0.00 0.00 0.00 3.53
1305 1318 3.592814 CCGCGCGTGGAGAGGATA 61.593 66.667 34.65 0.00 0.00 2.59
1327 1340 1.566018 GCTCGTGTACCACAACCTGC 61.566 60.000 0.00 0.00 33.40 4.85
1338 1351 1.106351 ACAACCTGCGCAATTGGTCA 61.106 50.000 28.14 0.00 32.98 4.02
1359 1372 3.117372 CACTACTACCCGCCTCCG 58.883 66.667 0.00 0.00 0.00 4.63
1449 1462 1.244019 GGTTGCCGGAGCTGAACATT 61.244 55.000 5.05 0.00 40.80 2.71
1545 1564 2.088423 TGTGTGTGGTTTGACTTGGAC 58.912 47.619 0.00 0.00 0.00 4.02
1914 1933 1.854434 GCGTTGTGGACACGAACAAAG 60.854 52.381 13.83 0.00 37.99 2.77
1960 1979 6.541641 TGCTGCATAGTTTGTTTTGGATTTTT 59.458 30.769 0.00 0.00 0.00 1.94
1990 2009 2.746904 TCAACCATCACTAACAATGCCG 59.253 45.455 0.00 0.00 0.00 5.69
1998 2017 1.349688 ACTAACAATGCCGGGAGACAA 59.650 47.619 2.18 0.00 0.00 3.18
2004 2023 0.181350 ATGCCGGGAGACAAGGAATC 59.819 55.000 2.18 0.00 32.12 2.52
2050 2103 0.612744 GAAGTCAGGGCTCAGCTTCT 59.387 55.000 0.00 0.00 34.44 2.85
2059 2112 0.036010 GCTCAGCTTCTGCCCTTGTA 60.036 55.000 0.00 0.00 40.80 2.41
2062 2115 0.326264 CAGCTTCTGCCCTTGTAGGT 59.674 55.000 0.00 0.00 40.80 3.08
2063 2116 1.068121 AGCTTCTGCCCTTGTAGGTT 58.932 50.000 0.00 0.00 40.80 3.50
2064 2117 1.003696 AGCTTCTGCCCTTGTAGGTTC 59.996 52.381 0.00 0.00 40.80 3.62
2065 2118 1.726853 CTTCTGCCCTTGTAGGTTCG 58.273 55.000 0.00 0.00 31.93 3.95
2106 2159 8.644264 TCGTTTATTTCGAAGGTTAATTTTCG 57.356 30.769 14.51 14.51 45.49 3.46
2137 2190 8.978874 TGGCTATAATTGATGTTCATAGTTGT 57.021 30.769 0.00 0.00 0.00 3.32
2157 2210 0.458669 CATGTTCATGCCAAGGAGCC 59.541 55.000 0.00 0.00 0.00 4.70
2163 2216 0.901580 CATGCCAAGGAGCCCTGTTT 60.902 55.000 0.00 0.00 32.13 2.83
2164 2217 0.901580 ATGCCAAGGAGCCCTGTTTG 60.902 55.000 0.00 0.00 32.13 2.93
2251 2311 4.142138 ACGCTGTATTTCAGAGGAAGTAGG 60.142 45.833 0.00 0.00 45.84 3.18
2351 2411 6.410540 TCCATTTTAGCACTGTTTGGTTTTT 58.589 32.000 0.00 0.00 37.13 1.94
2397 2457 5.409214 TGATTACATGATGATGTACATGCCG 59.591 40.000 14.43 0.00 43.41 5.69
2411 2471 4.712122 ACATGCCGTTTTGGTAATTAGG 57.288 40.909 0.00 0.00 41.21 2.69
2420 2480 6.094325 CCGTTTTGGTAATTAGGCTGATAACA 59.906 38.462 0.00 0.00 0.00 2.41
2421 2481 6.964934 CGTTTTGGTAATTAGGCTGATAACAC 59.035 38.462 0.00 0.00 0.00 3.32
2423 2483 7.624360 TTTGGTAATTAGGCTGATAACACAG 57.376 36.000 0.00 0.00 40.43 3.66
2424 2484 6.553953 TGGTAATTAGGCTGATAACACAGA 57.446 37.500 0.00 0.00 39.94 3.41
2434 2494 5.449588 GGCTGATAACACAGATTTCATGGTG 60.450 44.000 0.00 0.00 39.94 4.17
2442 2502 5.360714 ACACAGATTTCATGGTGACTTGTTT 59.639 36.000 4.78 0.00 36.87 2.83
2472 2532 4.141711 ACAGTCTGTATGTGGTGTGAACTT 60.142 41.667 2.87 0.00 0.00 2.66
2473 2533 4.449068 CAGTCTGTATGTGGTGTGAACTTC 59.551 45.833 0.00 0.00 0.00 3.01
2488 2548 1.033574 ACTTCCCGCTATCTTCTCGG 58.966 55.000 0.00 0.00 42.58 4.63
2493 2553 1.887198 CCCGCTATCTTCTCGGTACAT 59.113 52.381 0.00 0.00 41.46 2.29
2507 2567 3.907894 GGTACATTTCTTGTTCCGCAA 57.092 42.857 0.00 0.00 39.87 4.85
2534 2613 8.892723 TCTGTTGATGATTTGGTGTTATATGAC 58.107 33.333 0.00 0.00 0.00 3.06
2536 2615 8.676401 TGTTGATGATTTGGTGTTATATGACAG 58.324 33.333 0.00 0.00 0.00 3.51
2543 2622 5.654603 TGGTGTTATATGACAGTCGAAGT 57.345 39.130 0.00 0.00 0.00 3.01
2552 2631 5.979288 ATGACAGTCGAAGTTTACTAGGT 57.021 39.130 0.00 0.00 0.00 3.08
2554 2633 6.882610 TGACAGTCGAAGTTTACTAGGTTA 57.117 37.500 0.00 0.00 0.00 2.85
2597 2676 4.864704 AAGGGTCGCATAATTGTTGTTT 57.135 36.364 0.00 0.00 0.00 2.83
2618 2697 7.721402 TGTTTAGAAATTAGCACCAACAATGT 58.279 30.769 0.00 0.00 0.00 2.71
2621 2700 6.160576 AGAAATTAGCACCAACAATGTTGT 57.839 33.333 22.66 9.79 44.72 3.32
2622 2701 6.215845 AGAAATTAGCACCAACAATGTTGTC 58.784 36.000 22.66 11.34 41.31 3.18
2638 2717 0.035152 TGTCATAGGGCTGTTGCTGG 60.035 55.000 0.00 0.00 39.59 4.85
2654 2733 1.065251 GCTGGCTGAAGCTTTAGATGC 59.935 52.381 21.52 16.05 40.20 3.91
2685 2764 6.967199 GGTTTAAACAAGAGGCATTCTATTCG 59.033 38.462 19.57 0.00 34.14 3.34
2729 2808 6.102006 TCGTTACACAACTCTTCACTTTTG 57.898 37.500 0.00 0.00 32.09 2.44
2741 2828 6.828785 ACTCTTCACTTTTGAAACATGTACCT 59.171 34.615 0.00 0.00 41.34 3.08
2753 2840 6.878923 TGAAACATGTACCTGGACTGATTTAG 59.121 38.462 0.00 0.00 0.00 1.85
2796 2886 9.421806 TGCTTTAACAATGTCATTTATCAAAGG 57.578 29.630 14.48 0.00 0.00 3.11
2807 2897 7.560991 TGTCATTTATCAAAGGTATGCATTCCT 59.439 33.333 18.47 18.47 35.34 3.36
2877 2967 0.761187 TCTTGTGAGCTGGCTTCAGT 59.239 50.000 0.00 0.00 40.51 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.196139 GCCTATTTTTACATATTGGGCCATATA 57.804 33.333 7.26 8.92 0.00 0.86
20 21 7.900784 AGCCTATTTTTACATATTGGGCCATAT 59.099 33.333 7.26 6.75 37.98 1.78
21 22 7.245292 AGCCTATTTTTACATATTGGGCCATA 58.755 34.615 7.26 2.27 37.98 2.74
22 23 6.084060 AGCCTATTTTTACATATTGGGCCAT 58.916 36.000 7.26 0.00 37.98 4.40
23 24 5.463154 AGCCTATTTTTACATATTGGGCCA 58.537 37.500 0.00 0.00 37.98 5.36
24 25 6.419484 AAGCCTATTTTTACATATTGGGCC 57.581 37.500 0.00 0.00 37.98 5.80
25 26 9.825109 TTTTAAGCCTATTTTTACATATTGGGC 57.175 29.630 0.00 0.00 37.57 5.36
33 34 9.396938 GTAAGCGTTTTTAAGCCTATTTTTACA 57.603 29.630 0.00 0.00 0.00 2.41
34 35 9.616634 AGTAAGCGTTTTTAAGCCTATTTTTAC 57.383 29.630 0.00 0.00 0.00 2.01
35 36 9.615295 CAGTAAGCGTTTTTAAGCCTATTTTTA 57.385 29.630 0.00 0.00 0.00 1.52
36 37 7.115805 GCAGTAAGCGTTTTTAAGCCTATTTTT 59.884 33.333 0.00 0.00 0.00 1.94
37 38 6.584942 GCAGTAAGCGTTTTTAAGCCTATTTT 59.415 34.615 0.00 0.00 0.00 1.82
38 39 6.090783 GCAGTAAGCGTTTTTAAGCCTATTT 58.909 36.000 0.00 0.00 0.00 1.40
39 40 5.637809 GCAGTAAGCGTTTTTAAGCCTATT 58.362 37.500 0.00 0.00 0.00 1.73
40 41 5.231265 GCAGTAAGCGTTTTTAAGCCTAT 57.769 39.130 0.00 0.00 0.00 2.57
41 42 4.673534 GCAGTAAGCGTTTTTAAGCCTA 57.326 40.909 0.00 0.00 0.00 3.93
42 43 3.554259 GCAGTAAGCGTTTTTAAGCCT 57.446 42.857 0.00 0.00 0.00 4.58
59 60 4.678509 TTTAGCCTGTTATTTGACGCAG 57.321 40.909 0.00 0.00 0.00 5.18
60 61 5.637006 ATTTTAGCCTGTTATTTGACGCA 57.363 34.783 0.00 0.00 0.00 5.24
61 62 6.142320 GCATATTTTAGCCTGTTATTTGACGC 59.858 38.462 0.00 0.00 0.00 5.19
62 63 7.192913 TGCATATTTTAGCCTGTTATTTGACG 58.807 34.615 0.00 0.00 0.00 4.35
63 64 7.168135 GCTGCATATTTTAGCCTGTTATTTGAC 59.832 37.037 0.00 0.00 0.00 3.18
64 65 7.202526 GCTGCATATTTTAGCCTGTTATTTGA 58.797 34.615 0.00 0.00 0.00 2.69
65 66 7.398834 GCTGCATATTTTAGCCTGTTATTTG 57.601 36.000 0.00 0.00 0.00 2.32
75 76 1.001378 CGGTGGGCTGCATATTTTAGC 60.001 52.381 0.50 0.00 36.74 3.09
76 77 2.033299 CACGGTGGGCTGCATATTTTAG 59.967 50.000 0.50 0.00 0.00 1.85
77 78 2.020720 CACGGTGGGCTGCATATTTTA 58.979 47.619 0.50 0.00 0.00 1.52
78 79 0.817013 CACGGTGGGCTGCATATTTT 59.183 50.000 0.50 0.00 0.00 1.82
79 80 1.666209 GCACGGTGGGCTGCATATTT 61.666 55.000 10.60 0.00 33.31 1.40
80 81 2.120909 GCACGGTGGGCTGCATATT 61.121 57.895 10.60 0.00 33.31 1.28
81 82 1.695114 TAGCACGGTGGGCTGCATAT 61.695 55.000 10.60 0.00 42.62 1.78
82 83 1.904990 TTAGCACGGTGGGCTGCATA 61.905 55.000 10.60 0.00 42.62 3.14
83 84 2.762969 TTTAGCACGGTGGGCTGCAT 62.763 55.000 10.60 0.00 42.62 3.96
84 85 3.483788 TTTAGCACGGTGGGCTGCA 62.484 57.895 10.60 0.00 42.62 4.41
85 86 2.671619 TTTAGCACGGTGGGCTGC 60.672 61.111 10.60 0.00 42.62 5.25
86 87 2.677003 CGTTTAGCACGGTGGGCTG 61.677 63.158 10.60 0.00 45.89 4.85
87 88 2.358247 CGTTTAGCACGGTGGGCT 60.358 61.111 10.60 4.18 45.89 5.19
111 112 0.745486 ATTAGTAAACGGGCCGGCAC 60.745 55.000 31.78 26.77 0.00 5.01
112 113 0.035247 AATTAGTAAACGGGCCGGCA 60.035 50.000 31.78 11.85 0.00 5.69
113 114 0.379316 CAATTAGTAAACGGGCCGGC 59.621 55.000 31.78 21.18 0.00 6.13
114 115 1.018910 CCAATTAGTAAACGGGCCGG 58.981 55.000 31.78 12.53 0.00 6.13
115 116 2.027003 TCCAATTAGTAAACGGGCCG 57.973 50.000 27.06 27.06 0.00 6.13
116 117 2.546789 CGATCCAATTAGTAAACGGGCC 59.453 50.000 0.00 0.00 0.00 5.80
117 118 3.001939 CACGATCCAATTAGTAAACGGGC 59.998 47.826 0.00 0.00 0.00 6.13
118 119 3.001939 GCACGATCCAATTAGTAAACGGG 59.998 47.826 0.00 0.00 0.00 5.28
119 120 3.001939 GGCACGATCCAATTAGTAAACGG 59.998 47.826 0.00 0.00 0.00 4.44
120 121 3.869246 AGGCACGATCCAATTAGTAAACG 59.131 43.478 0.00 0.00 0.00 3.60
121 122 4.035208 CCAGGCACGATCCAATTAGTAAAC 59.965 45.833 0.00 0.00 0.00 2.01
122 123 4.196193 CCAGGCACGATCCAATTAGTAAA 58.804 43.478 0.00 0.00 0.00 2.01
123 124 3.433031 CCCAGGCACGATCCAATTAGTAA 60.433 47.826 0.00 0.00 0.00 2.24
124 125 2.104111 CCCAGGCACGATCCAATTAGTA 59.896 50.000 0.00 0.00 0.00 1.82
125 126 1.134098 CCCAGGCACGATCCAATTAGT 60.134 52.381 0.00 0.00 0.00 2.24
126 127 1.597742 CCCAGGCACGATCCAATTAG 58.402 55.000 0.00 0.00 0.00 1.73
127 128 0.465460 GCCCAGGCACGATCCAATTA 60.465 55.000 3.12 0.00 41.49 1.40
128 129 1.754234 GCCCAGGCACGATCCAATT 60.754 57.895 3.12 0.00 41.49 2.32
129 130 2.124151 GCCCAGGCACGATCCAAT 60.124 61.111 3.12 0.00 41.49 3.16
130 131 4.424711 GGCCCAGGCACGATCCAA 62.425 66.667 11.50 0.00 44.11 3.53
132 133 4.864334 CAGGCCCAGGCACGATCC 62.864 72.222 11.50 0.00 44.11 3.36
133 134 4.864334 CCAGGCCCAGGCACGATC 62.864 72.222 11.50 0.00 44.11 3.69
175 176 1.706443 GATTACTATACGGGCCGTGC 58.294 55.000 39.80 15.03 41.39 5.34
176 177 1.267806 ACGATTACTATACGGGCCGTG 59.732 52.381 39.80 26.05 41.39 4.94
177 178 1.267806 CACGATTACTATACGGGCCGT 59.732 52.381 35.91 35.91 44.35 5.68
178 179 1.973138 CACGATTACTATACGGGCCG 58.027 55.000 27.06 27.06 0.00 6.13
181 182 1.891150 AGGGCACGATTACTATACGGG 59.109 52.381 0.00 0.00 0.00 5.28
182 183 2.555325 TCAGGGCACGATTACTATACGG 59.445 50.000 0.00 0.00 0.00 4.02
183 184 3.562505 GTCAGGGCACGATTACTATACG 58.437 50.000 0.00 0.00 0.00 3.06
184 185 3.562505 CGTCAGGGCACGATTACTATAC 58.437 50.000 0.00 0.00 42.69 1.47
185 186 2.555325 CCGTCAGGGCACGATTACTATA 59.445 50.000 0.00 0.00 42.69 1.31
186 187 1.340248 CCGTCAGGGCACGATTACTAT 59.660 52.381 0.00 0.00 42.69 2.12
187 188 0.742505 CCGTCAGGGCACGATTACTA 59.257 55.000 0.00 0.00 42.69 1.82
188 189 1.515954 CCGTCAGGGCACGATTACT 59.484 57.895 0.00 0.00 42.69 2.24
189 190 4.104143 CCGTCAGGGCACGATTAC 57.896 61.111 0.00 0.00 42.69 1.89
213 214 3.476031 ATAATCGTGCCTGGCCCGG 62.476 63.158 22.84 9.24 0.00 5.73
214 215 2.111043 ATAATCGTGCCTGGCCCG 59.889 61.111 17.67 17.67 0.00 6.13
215 216 0.250901 ATCATAATCGTGCCTGGCCC 60.251 55.000 17.53 2.94 0.00 5.80
216 217 0.877071 CATCATAATCGTGCCTGGCC 59.123 55.000 17.53 6.66 0.00 5.36
217 218 0.877071 CCATCATAATCGTGCCTGGC 59.123 55.000 12.87 12.87 0.00 4.85
218 219 1.202806 ACCCATCATAATCGTGCCTGG 60.203 52.381 0.00 0.00 0.00 4.45
219 220 2.146342 GACCCATCATAATCGTGCCTG 58.854 52.381 0.00 0.00 0.00 4.85
220 221 1.270305 CGACCCATCATAATCGTGCCT 60.270 52.381 0.00 0.00 0.00 4.75
221 222 1.148310 CGACCCATCATAATCGTGCC 58.852 55.000 0.00 0.00 0.00 5.01
222 223 1.148310 CCGACCCATCATAATCGTGC 58.852 55.000 0.00 0.00 32.70 5.34
223 224 1.795768 CCCGACCCATCATAATCGTG 58.204 55.000 0.00 0.00 32.70 4.35
224 225 0.034896 GCCCGACCCATCATAATCGT 59.965 55.000 0.00 0.00 32.70 3.73
225 226 0.673644 GGCCCGACCCATCATAATCG 60.674 60.000 0.00 0.00 0.00 3.34
226 227 0.673644 CGGCCCGACCCATCATAATC 60.674 60.000 0.00 0.00 33.26 1.75
227 228 1.374947 CGGCCCGACCCATCATAAT 59.625 57.895 0.00 0.00 33.26 1.28
228 229 2.067605 ACGGCCCGACCCATCATAA 61.068 57.895 11.71 0.00 33.26 1.90
229 230 2.445085 ACGGCCCGACCCATCATA 60.445 61.111 11.71 0.00 33.26 2.15
230 231 4.175337 CACGGCCCGACCCATCAT 62.175 66.667 11.71 0.00 33.26 2.45
262 263 0.818040 GCTATACCTGGCCAAACGGG 60.818 60.000 7.01 7.12 42.81 5.28
263 264 2.702847 GCTATACCTGGCCAAACGG 58.297 57.895 7.01 7.56 0.00 4.44
270 271 2.373921 GGTAGGGGCTATACCTGGC 58.626 63.158 10.30 0.00 39.73 4.85
274 275 1.976404 GTCCAAGGTAGGGGCTATACC 59.024 57.143 9.74 9.74 42.62 2.73
275 276 2.686119 TGTCCAAGGTAGGGGCTATAC 58.314 52.381 0.00 0.00 0.00 1.47
276 277 3.314693 CTTGTCCAAGGTAGGGGCTATA 58.685 50.000 0.00 0.00 34.87 1.31
277 278 2.127708 CTTGTCCAAGGTAGGGGCTAT 58.872 52.381 0.00 0.00 34.87 2.97
278 279 1.580059 CTTGTCCAAGGTAGGGGCTA 58.420 55.000 0.00 0.00 34.87 3.93
279 280 1.853250 GCTTGTCCAAGGTAGGGGCT 61.853 60.000 8.97 0.00 38.80 5.19
280 281 1.378646 GCTTGTCCAAGGTAGGGGC 60.379 63.158 8.97 0.00 38.80 5.80
281 282 0.322546 GTGCTTGTCCAAGGTAGGGG 60.323 60.000 8.97 0.00 38.80 4.79
282 283 0.673644 CGTGCTTGTCCAAGGTAGGG 60.674 60.000 8.97 0.00 38.80 3.53
283 284 0.673644 CCGTGCTTGTCCAAGGTAGG 60.674 60.000 8.97 0.00 38.80 3.18
284 285 1.298859 GCCGTGCTTGTCCAAGGTAG 61.299 60.000 8.97 0.00 38.80 3.18
285 286 1.302192 GCCGTGCTTGTCCAAGGTA 60.302 57.895 8.97 0.00 38.80 3.08
289 290 2.124529 TGTGCCGTGCTTGTCCAA 60.125 55.556 0.00 0.00 0.00 3.53
315 316 2.611800 TGGCTGATCTGTGGGCCT 60.612 61.111 4.53 0.00 44.36 5.19
324 325 1.227205 CTGTCTCCGCTGGCTGATC 60.227 63.158 0.00 0.00 0.00 2.92
326 327 2.601666 ACTGTCTCCGCTGGCTGA 60.602 61.111 0.00 0.00 0.00 4.26
353 354 1.986757 GAGTGGGAGGCTGAGCTGA 60.987 63.158 3.72 0.00 0.00 4.26
367 368 2.034687 CTTGTGGCCCTGGGAGTG 59.965 66.667 19.27 0.00 0.00 3.51
368 369 3.260100 CCTTGTGGCCCTGGGAGT 61.260 66.667 19.27 0.00 0.00 3.85
369 370 4.052518 CCCTTGTGGCCCTGGGAG 62.053 72.222 19.27 3.90 42.11 4.30
370 371 3.508786 TACCCTTGTGGCCCTGGGA 62.509 63.158 19.27 0.00 42.11 4.37
371 372 2.543797 TTACCCTTGTGGCCCTGGG 61.544 63.158 8.86 8.86 44.89 4.45
372 373 1.304134 GTTACCCTTGTGGCCCTGG 60.304 63.158 0.00 0.00 37.83 4.45
381 382 0.958876 GGCACCGGAAGTTACCCTTG 60.959 60.000 9.46 0.00 32.03 3.61
468 477 2.238395 GAGAGAATTCTTGGTGAGGGCT 59.762 50.000 9.87 0.00 32.53 5.19
469 478 2.637947 GAGAGAATTCTTGGTGAGGGC 58.362 52.381 9.87 0.00 32.53 5.19
528 537 1.079057 GAGGAGAGGGTTTGCGGAC 60.079 63.158 0.00 0.00 0.00 4.79
532 541 0.912006 AGGAGGAGGAGAGGGTTTGC 60.912 60.000 0.00 0.00 0.00 3.68
660 669 7.545615 ACTGTGAAAACAAGATTGGTCTTTTTC 59.454 33.333 10.09 10.09 41.92 2.29
666 675 4.580580 AGGACTGTGAAAACAAGATTGGTC 59.419 41.667 0.00 0.00 0.00 4.02
811 820 1.887707 GAGATTCGGCGCGGGAAAT 60.888 57.895 15.48 8.29 0.00 2.17
1036 1046 2.613977 CCGGAGAACAGCTCAAGAACAT 60.614 50.000 0.00 0.00 45.81 2.71
1045 1055 4.379243 CGCCACCGGAGAACAGCT 62.379 66.667 9.46 0.00 0.00 4.24
1245 1258 1.906574 AGGCCGAATTGGAAGTACTGA 59.093 47.619 0.00 0.00 42.00 3.41
1327 1340 1.135972 GTAGTGCTGTGACCAATTGCG 60.136 52.381 0.00 0.00 0.00 4.85
1338 1351 1.305046 AGGCGGGTAGTAGTGCTGT 60.305 57.895 0.00 0.00 0.00 4.40
1395 1408 1.453235 GGCAGCATCATAGGCCAGA 59.547 57.895 5.01 0.00 45.70 3.86
1449 1462 4.373116 GGGCTTCCTGACGCGACA 62.373 66.667 15.93 13.32 0.00 4.35
1615 1634 2.028930 CCTCACTGGAGTTCACCACTAC 60.029 54.545 0.00 0.00 39.64 2.73
1914 1933 1.880340 CTCGCTCTCAATCACCGGC 60.880 63.158 0.00 0.00 0.00 6.13
1960 1979 3.213206 AGTGATGGTTGAACTCTGCAA 57.787 42.857 0.00 0.00 0.00 4.08
1990 2009 1.909302 TGGACAGATTCCTTGTCTCCC 59.091 52.381 5.49 0.00 46.10 4.30
2015 2065 5.352569 CCTGACTTCAGTAATTAGCAACCAG 59.647 44.000 5.53 0.00 42.27 4.00
2016 2066 5.245531 CCTGACTTCAGTAATTAGCAACCA 58.754 41.667 5.53 0.00 42.27 3.67
2050 2103 1.980052 CCTCGAACCTACAAGGGCA 59.020 57.895 0.00 0.00 40.58 5.36
2059 2112 1.543429 CCAAAAGAGTGCCTCGAACCT 60.543 52.381 0.00 0.00 35.36 3.50
2062 2115 2.218603 GAACCAAAAGAGTGCCTCGAA 58.781 47.619 0.00 0.00 35.36 3.71
2063 2116 1.872237 CGAACCAAAAGAGTGCCTCGA 60.872 52.381 0.00 0.00 35.36 4.04
2064 2117 0.512952 CGAACCAAAAGAGTGCCTCG 59.487 55.000 0.00 0.00 35.36 4.63
2065 2118 1.594331 ACGAACCAAAAGAGTGCCTC 58.406 50.000 0.00 0.00 0.00 4.70
2082 2135 8.352936 CACGAAAATTAACCTTCGAAATAAACG 58.647 33.333 21.35 7.26 45.65 3.60
2106 2159 5.049474 TGAACATCAATTATAGCCATCGCAC 60.049 40.000 0.00 0.00 37.52 5.34
2137 2190 1.466856 GCTCCTTGGCATGAACATGA 58.533 50.000 17.40 0.00 41.20 3.07
2251 2311 2.674852 GTTACCCAGCTTTACCGCTAAC 59.325 50.000 0.00 0.00 38.41 2.34
2351 2411 3.031013 TCTCAACAGGTGTCTGAACAGA 58.969 45.455 0.00 0.00 43.49 3.41
2397 2457 7.822658 TGTGTTATCAGCCTAATTACCAAAAC 58.177 34.615 0.00 0.00 0.00 2.43
2411 2471 5.355071 TCACCATGAAATCTGTGTTATCAGC 59.645 40.000 0.00 0.00 35.63 4.26
2420 2480 6.469782 AAAACAAGTCACCATGAAATCTGT 57.530 33.333 0.00 0.00 0.00 3.41
2421 2481 8.352201 TCTTAAAACAAGTCACCATGAAATCTG 58.648 33.333 0.00 0.00 0.00 2.90
2442 2502 7.177744 TCACACCACATACAGACTGTATCTTAA 59.822 37.037 22.62 0.51 41.28 1.85
2488 2548 5.088739 CAGATTGCGGAACAAGAAATGTAC 58.911 41.667 0.00 0.00 42.99 2.90
2493 2553 3.629855 TCAACAGATTGCGGAACAAGAAA 59.370 39.130 0.00 0.00 42.87 2.52
2507 2567 9.631257 TCATATAACACCAAATCATCAACAGAT 57.369 29.630 0.00 0.00 0.00 2.90
2534 2613 8.928270 AATGATAACCTAGTAAACTTCGACTG 57.072 34.615 0.00 0.00 0.00 3.51
2573 2652 5.208463 ACAACAATTATGCGACCCTTTTT 57.792 34.783 0.00 0.00 0.00 1.94
2578 2657 5.554822 TCTAAACAACAATTATGCGACCC 57.445 39.130 0.00 0.00 0.00 4.46
2582 2661 9.071221 TGCTAATTTCTAAACAACAATTATGCG 57.929 29.630 0.00 0.00 0.00 4.73
2587 2666 9.040939 GTTGGTGCTAATTTCTAAACAACAATT 57.959 29.630 0.00 0.00 37.11 2.32
2590 2669 7.101652 TGTTGGTGCTAATTTCTAAACAACA 57.898 32.000 0.00 0.00 42.03 3.33
2591 2670 7.995463 TTGTTGGTGCTAATTTCTAAACAAC 57.005 32.000 0.00 0.00 36.97 3.32
2597 2676 7.013750 TGACAACATTGTTGGTGCTAATTTCTA 59.986 33.333 28.10 6.71 44.88 2.10
2609 2688 3.091545 AGCCCTATGACAACATTGTTGG 58.908 45.455 28.10 13.30 42.43 3.77
2618 2697 1.614051 CCAGCAACAGCCCTATGACAA 60.614 52.381 0.00 0.00 0.00 3.18
2621 2700 1.077501 GCCAGCAACAGCCCTATGA 60.078 57.895 0.00 0.00 0.00 2.15
2622 2701 1.077212 AGCCAGCAACAGCCCTATG 60.077 57.895 0.00 0.00 0.00 2.23
2638 2717 2.354199 GTCAGGCATCTAAAGCTTCAGC 59.646 50.000 0.00 0.00 42.49 4.26
2654 2733 2.225727 GCCTCTTGTTTAAACCGTCAGG 59.774 50.000 15.59 14.75 45.13 3.86
2704 2783 7.707464 TCAAAAGTGAAGAGTTGTGTAACGATA 59.293 33.333 0.00 0.00 42.39 2.92
2729 2808 6.316390 CCTAAATCAGTCCAGGTACATGTTTC 59.684 42.308 2.30 0.00 0.00 2.78
2741 2828 8.383175 AGAATTACACTTTCCTAAATCAGTCCA 58.617 33.333 0.00 0.00 0.00 4.02
2796 2886 1.981495 AGAGGGCCTAGGAATGCATAC 59.019 52.381 14.75 0.00 0.00 2.39
2807 2897 0.398696 TTTTGCGACAAGAGGGCCTA 59.601 50.000 5.73 0.00 0.00 3.93
2877 2967 6.701340 ACACATGCTCAGAAAGTACTATGAA 58.299 36.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.