Multiple sequence alignment - TraesCS5B01G144500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G144500 | chr5B | 100.000 | 5512 | 0 | 0 | 1 | 5512 | 271918537 | 271913026 | 0.000000e+00 | 10179.0 |
1 | TraesCS5B01G144500 | chr5B | 100.000 | 2366 | 0 | 0 | 6923 | 9288 | 271911615 | 271909250 | 0.000000e+00 | 4370.0 |
2 | TraesCS5B01G144500 | chr5B | 100.000 | 619 | 0 | 0 | 5613 | 6231 | 271912925 | 271912307 | 0.000000e+00 | 1144.0 |
3 | TraesCS5B01G144500 | chr5B | 98.632 | 585 | 8 | 0 | 5647 | 6231 | 86146361 | 86146945 | 0.000000e+00 | 1037.0 |
4 | TraesCS5B01G144500 | chr5B | 97.400 | 577 | 15 | 0 | 8712 | 9288 | 71029797 | 71030373 | 0.000000e+00 | 983.0 |
5 | TraesCS5B01G144500 | chr5B | 92.707 | 617 | 39 | 3 | 5613 | 6227 | 86159004 | 86159616 | 0.000000e+00 | 885.0 |
6 | TraesCS5B01G144500 | chr5B | 92.456 | 623 | 38 | 3 | 5613 | 6230 | 86158742 | 86159360 | 0.000000e+00 | 881.0 |
7 | TraesCS5B01G144500 | chr5B | 99.074 | 108 | 1 | 0 | 6923 | 7030 | 86142553 | 86142660 | 2.650000e-45 | 195.0 |
8 | TraesCS5B01G144500 | chr5B | 99.065 | 107 | 1 | 0 | 6923 | 7029 | 86159047 | 86159153 | 9.520000e-45 | 193.0 |
9 | TraesCS5B01G144500 | chr5A | 93.168 | 2620 | 88 | 34 | 1 | 2588 | 321895823 | 321893263 | 0.000000e+00 | 3762.0 |
10 | TraesCS5B01G144500 | chr5A | 93.597 | 734 | 31 | 10 | 7699 | 8428 | 321892628 | 321891907 | 0.000000e+00 | 1081.0 |
11 | TraesCS5B01G144500 | chr5A | 94.811 | 424 | 19 | 3 | 4445 | 4865 | 321893046 | 321892623 | 0.000000e+00 | 658.0 |
12 | TraesCS5B01G144500 | chr5D | 91.165 | 2241 | 88 | 50 | 3 | 2198 | 233154445 | 233156620 | 0.000000e+00 | 2940.0 |
13 | TraesCS5B01G144500 | chr5D | 96.750 | 923 | 27 | 3 | 2124 | 3044 | 233156618 | 233157539 | 0.000000e+00 | 1535.0 |
14 | TraesCS5B01G144500 | chr5D | 93.369 | 739 | 33 | 9 | 7695 | 8428 | 233158045 | 233158772 | 0.000000e+00 | 1079.0 |
15 | TraesCS5B01G144500 | chr5D | 96.718 | 457 | 15 | 0 | 4401 | 4857 | 233157584 | 233158040 | 0.000000e+00 | 761.0 |
16 | TraesCS5B01G144500 | chr2D | 91.916 | 1336 | 101 | 6 | 3060 | 4392 | 8699480 | 8698149 | 0.000000e+00 | 1862.0 |
17 | TraesCS5B01G144500 | chr2D | 91.038 | 1339 | 113 | 6 | 3060 | 4392 | 642038562 | 642039899 | 0.000000e+00 | 1801.0 |
18 | TraesCS5B01G144500 | chr2D | 97.920 | 577 | 12 | 0 | 8712 | 9288 | 91174659 | 91174083 | 0.000000e+00 | 1000.0 |
19 | TraesCS5B01G144500 | chr7B | 91.779 | 1338 | 104 | 6 | 3060 | 4394 | 451069596 | 451070930 | 0.000000e+00 | 1857.0 |
20 | TraesCS5B01G144500 | chr7B | 91.648 | 1341 | 103 | 8 | 3060 | 4395 | 745880511 | 745881847 | 0.000000e+00 | 1847.0 |
21 | TraesCS5B01G144500 | chr7B | 90.821 | 1340 | 115 | 7 | 3060 | 4395 | 745857187 | 745858522 | 0.000000e+00 | 1786.0 |
22 | TraesCS5B01G144500 | chr7B | 97.733 | 750 | 14 | 2 | 6923 | 7672 | 524884074 | 524884820 | 0.000000e+00 | 1288.0 |
23 | TraesCS5B01G144500 | chr7B | 99.541 | 653 | 3 | 0 | 4860 | 5512 | 524879691 | 524880343 | 0.000000e+00 | 1190.0 |
24 | TraesCS5B01G144500 | chr7B | 99.845 | 646 | 1 | 0 | 4867 | 5512 | 586983230 | 586983875 | 0.000000e+00 | 1188.0 |
25 | TraesCS5B01G144500 | chr7B | 97.920 | 577 | 12 | 0 | 8712 | 9288 | 513259110 | 513258534 | 0.000000e+00 | 1000.0 |
26 | TraesCS5B01G144500 | chr3B | 91.392 | 1336 | 108 | 6 | 3060 | 4392 | 581250876 | 581249545 | 0.000000e+00 | 1823.0 |
27 | TraesCS5B01G144500 | chr3B | 98.267 | 577 | 10 | 0 | 8712 | 9288 | 392757878 | 392758454 | 0.000000e+00 | 1011.0 |
28 | TraesCS5B01G144500 | chr6B | 91.360 | 1331 | 112 | 3 | 3065 | 4392 | 41851704 | 41853034 | 0.000000e+00 | 1818.0 |
29 | TraesCS5B01G144500 | chr6B | 99.345 | 763 | 1 | 1 | 6923 | 7685 | 694648990 | 694649748 | 0.000000e+00 | 1378.0 |
30 | TraesCS5B01G144500 | chr6B | 95.327 | 749 | 32 | 3 | 6924 | 7670 | 433033250 | 433033997 | 0.000000e+00 | 1186.0 |
31 | TraesCS5B01G144500 | chr6B | 97.574 | 577 | 14 | 0 | 8712 | 9288 | 179666136 | 179665560 | 0.000000e+00 | 989.0 |
32 | TraesCS5B01G144500 | chr6B | 94.030 | 536 | 9 | 5 | 4978 | 5512 | 432863040 | 432862527 | 0.000000e+00 | 791.0 |
33 | TraesCS5B01G144500 | chr6B | 88.619 | 659 | 49 | 15 | 4869 | 5509 | 716501821 | 716502471 | 0.000000e+00 | 778.0 |
34 | TraesCS5B01G144500 | chr1D | 91.465 | 1324 | 105 | 7 | 3073 | 4392 | 260316034 | 260314715 | 0.000000e+00 | 1812.0 |
35 | TraesCS5B01G144500 | chr1D | 80.581 | 654 | 62 | 35 | 1436 | 2080 | 269501864 | 269502461 | 2.380000e-120 | 444.0 |
36 | TraesCS5B01G144500 | chr1D | 78.322 | 143 | 31 | 0 | 4632 | 4774 | 400182992 | 400183134 | 9.930000e-15 | 93.5 |
37 | TraesCS5B01G144500 | chr1D | 78.906 | 128 | 27 | 0 | 4650 | 4777 | 400112621 | 400112494 | 4.620000e-13 | 87.9 |
38 | TraesCS5B01G144500 | chr7D | 90.395 | 1343 | 119 | 8 | 3063 | 4395 | 633857467 | 633856125 | 0.000000e+00 | 1757.0 |
39 | TraesCS5B01G144500 | chr3A | 99.690 | 646 | 2 | 0 | 4867 | 5512 | 541219440 | 541218795 | 0.000000e+00 | 1182.0 |
40 | TraesCS5B01G144500 | chr3A | 86.950 | 682 | 57 | 19 | 7025 | 7685 | 515907508 | 515908178 | 0.000000e+00 | 737.0 |
41 | TraesCS5B01G144500 | chr3A | 86.804 | 682 | 58 | 19 | 7025 | 7685 | 515912151 | 515912821 | 0.000000e+00 | 732.0 |
42 | TraesCS5B01G144500 | chr3A | 87.059 | 595 | 44 | 20 | 7112 | 7685 | 515908402 | 515908984 | 7.860000e-180 | 641.0 |
43 | TraesCS5B01G144500 | chr3A | 87.414 | 580 | 44 | 15 | 7112 | 7670 | 515905280 | 515905851 | 2.830000e-179 | 640.0 |
44 | TraesCS5B01G144500 | chr3A | 100.000 | 31 | 0 | 0 | 4867 | 4897 | 729605473 | 729605503 | 3.620000e-04 | 58.4 |
45 | TraesCS5B01G144500 | chrUn | 95.060 | 749 | 34 | 3 | 6924 | 7670 | 442743649 | 442744396 | 0.000000e+00 | 1175.0 |
46 | TraesCS5B01G144500 | chrUn | 98.732 | 552 | 7 | 0 | 5647 | 6198 | 473789635 | 473790186 | 0.000000e+00 | 981.0 |
47 | TraesCS5B01G144500 | chrUn | 97.670 | 515 | 11 | 1 | 7157 | 7670 | 460439951 | 460439437 | 0.000000e+00 | 883.0 |
48 | TraesCS5B01G144500 | chrUn | 97.476 | 515 | 12 | 1 | 7157 | 7670 | 463853529 | 463853015 | 0.000000e+00 | 878.0 |
49 | TraesCS5B01G144500 | chrUn | 92.419 | 620 | 38 | 3 | 5613 | 6231 | 221868828 | 221869439 | 0.000000e+00 | 876.0 |
50 | TraesCS5B01G144500 | chrUn | 92.419 | 620 | 38 | 3 | 5613 | 6231 | 261953186 | 261952575 | 0.000000e+00 | 876.0 |
51 | TraesCS5B01G144500 | chrUn | 88.571 | 665 | 49 | 15 | 4867 | 5512 | 15454205 | 15453549 | 0.000000e+00 | 782.0 |
52 | TraesCS5B01G144500 | chrUn | 87.897 | 661 | 61 | 14 | 4866 | 5512 | 242486655 | 242486000 | 0.000000e+00 | 760.0 |
53 | TraesCS5B01G144500 | chrUn | 99.074 | 108 | 1 | 0 | 6923 | 7030 | 476567860 | 476567967 | 2.650000e-45 | 195.0 |
54 | TraesCS5B01G144500 | chr4A | 98.708 | 619 | 8 | 0 | 5613 | 6231 | 687540282 | 687539664 | 0.000000e+00 | 1099.0 |
55 | TraesCS5B01G144500 | chr4A | 97.227 | 577 | 16 | 0 | 8712 | 9288 | 646131644 | 646131068 | 0.000000e+00 | 977.0 |
56 | TraesCS5B01G144500 | chr4A | 88.253 | 664 | 50 | 14 | 4866 | 5509 | 725914341 | 725914996 | 0.000000e+00 | 769.0 |
57 | TraesCS5B01G144500 | chr2B | 98.094 | 577 | 11 | 0 | 8712 | 9288 | 165393319 | 165393895 | 0.000000e+00 | 1005.0 |
58 | TraesCS5B01G144500 | chr3D | 97.400 | 577 | 15 | 0 | 8712 | 9288 | 285001212 | 285000636 | 0.000000e+00 | 983.0 |
59 | TraesCS5B01G144500 | chr3D | 92.892 | 619 | 36 | 2 | 5613 | 6231 | 96614290 | 96613680 | 0.000000e+00 | 893.0 |
60 | TraesCS5B01G144500 | chr3D | 92.020 | 614 | 45 | 4 | 4898 | 5509 | 124500691 | 124501302 | 0.000000e+00 | 859.0 |
61 | TraesCS5B01G144500 | chr3D | 99.074 | 108 | 1 | 0 | 6923 | 7030 | 96616605 | 96616498 | 2.650000e-45 | 195.0 |
62 | TraesCS5B01G144500 | chr3D | 99.074 | 108 | 1 | 0 | 6923 | 7030 | 96616961 | 96616854 | 2.650000e-45 | 195.0 |
63 | TraesCS5B01G144500 | chr6D | 97.227 | 577 | 16 | 0 | 8712 | 9288 | 454499831 | 454500407 | 0.000000e+00 | 977.0 |
64 | TraesCS5B01G144500 | chr6D | 92.147 | 624 | 44 | 2 | 5613 | 6231 | 213396464 | 213397087 | 0.000000e+00 | 876.0 |
65 | TraesCS5B01G144500 | chr6D | 77.029 | 579 | 64 | 34 | 7047 | 7589 | 254141001 | 254140456 | 1.540000e-67 | 268.0 |
66 | TraesCS5B01G144500 | chr6A | 88.404 | 664 | 51 | 15 | 4867 | 5512 | 90747896 | 90747241 | 0.000000e+00 | 776.0 |
67 | TraesCS5B01G144500 | chr4B | 87.709 | 659 | 61 | 13 | 4866 | 5509 | 420427482 | 420428135 | 0.000000e+00 | 750.0 |
68 | TraesCS5B01G144500 | chr4B | 78.261 | 115 | 21 | 3 | 4635 | 4747 | 146488850 | 146488962 | 4.650000e-08 | 71.3 |
69 | TraesCS5B01G144500 | chr4D | 87.629 | 485 | 37 | 11 | 4898 | 5360 | 393155023 | 393155506 | 8.200000e-150 | 542.0 |
70 | TraesCS5B01G144500 | chr4D | 88.679 | 53 | 6 | 0 | 4635 | 4687 | 102159441 | 102159493 | 2.160000e-06 | 65.8 |
71 | TraesCS5B01G144500 | chr1A | 80.569 | 633 | 68 | 32 | 1607 | 2213 | 333508379 | 333507776 | 3.980000e-118 | 436.0 |
72 | TraesCS5B01G144500 | chr1A | 78.322 | 143 | 31 | 0 | 4632 | 4774 | 496637851 | 496637993 | 9.930000e-15 | 93.5 |
73 | TraesCS5B01G144500 | chr1B | 79.021 | 143 | 30 | 0 | 4632 | 4774 | 537328739 | 537328881 | 2.130000e-16 | 99.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G144500 | chr5B | 271909250 | 271918537 | 9287 | True | 5231.000000 | 10179 | 100.000000 | 1 | 9288 | 3 | chr5B.!!$R1 | 9287 |
1 | TraesCS5B01G144500 | chr5B | 71029797 | 71030373 | 576 | False | 983.000000 | 983 | 97.400000 | 8712 | 9288 | 1 | chr5B.!!$F1 | 576 |
2 | TraesCS5B01G144500 | chr5B | 86158742 | 86159616 | 874 | False | 653.000000 | 885 | 94.742667 | 5613 | 7029 | 3 | chr5B.!!$F3 | 1416 |
3 | TraesCS5B01G144500 | chr5B | 86142553 | 86146945 | 4392 | False | 616.000000 | 1037 | 98.853000 | 5647 | 7030 | 2 | chr5B.!!$F2 | 1383 |
4 | TraesCS5B01G144500 | chr5A | 321891907 | 321895823 | 3916 | True | 1833.666667 | 3762 | 93.858667 | 1 | 8428 | 3 | chr5A.!!$R1 | 8427 |
5 | TraesCS5B01G144500 | chr5D | 233154445 | 233158772 | 4327 | False | 1578.750000 | 2940 | 94.500500 | 3 | 8428 | 4 | chr5D.!!$F1 | 8425 |
6 | TraesCS5B01G144500 | chr2D | 8698149 | 8699480 | 1331 | True | 1862.000000 | 1862 | 91.916000 | 3060 | 4392 | 1 | chr2D.!!$R1 | 1332 |
7 | TraesCS5B01G144500 | chr2D | 642038562 | 642039899 | 1337 | False | 1801.000000 | 1801 | 91.038000 | 3060 | 4392 | 1 | chr2D.!!$F1 | 1332 |
8 | TraesCS5B01G144500 | chr2D | 91174083 | 91174659 | 576 | True | 1000.000000 | 1000 | 97.920000 | 8712 | 9288 | 1 | chr2D.!!$R2 | 576 |
9 | TraesCS5B01G144500 | chr7B | 451069596 | 451070930 | 1334 | False | 1857.000000 | 1857 | 91.779000 | 3060 | 4394 | 1 | chr7B.!!$F1 | 1334 |
10 | TraesCS5B01G144500 | chr7B | 745880511 | 745881847 | 1336 | False | 1847.000000 | 1847 | 91.648000 | 3060 | 4395 | 1 | chr7B.!!$F4 | 1335 |
11 | TraesCS5B01G144500 | chr7B | 745857187 | 745858522 | 1335 | False | 1786.000000 | 1786 | 90.821000 | 3060 | 4395 | 1 | chr7B.!!$F3 | 1335 |
12 | TraesCS5B01G144500 | chr7B | 524879691 | 524884820 | 5129 | False | 1239.000000 | 1288 | 98.637000 | 4860 | 7672 | 2 | chr7B.!!$F5 | 2812 |
13 | TraesCS5B01G144500 | chr7B | 586983230 | 586983875 | 645 | False | 1188.000000 | 1188 | 99.845000 | 4867 | 5512 | 1 | chr7B.!!$F2 | 645 |
14 | TraesCS5B01G144500 | chr7B | 513258534 | 513259110 | 576 | True | 1000.000000 | 1000 | 97.920000 | 8712 | 9288 | 1 | chr7B.!!$R1 | 576 |
15 | TraesCS5B01G144500 | chr3B | 581249545 | 581250876 | 1331 | True | 1823.000000 | 1823 | 91.392000 | 3060 | 4392 | 1 | chr3B.!!$R1 | 1332 |
16 | TraesCS5B01G144500 | chr3B | 392757878 | 392758454 | 576 | False | 1011.000000 | 1011 | 98.267000 | 8712 | 9288 | 1 | chr3B.!!$F1 | 576 |
17 | TraesCS5B01G144500 | chr6B | 41851704 | 41853034 | 1330 | False | 1818.000000 | 1818 | 91.360000 | 3065 | 4392 | 1 | chr6B.!!$F1 | 1327 |
18 | TraesCS5B01G144500 | chr6B | 694648990 | 694649748 | 758 | False | 1378.000000 | 1378 | 99.345000 | 6923 | 7685 | 1 | chr6B.!!$F3 | 762 |
19 | TraesCS5B01G144500 | chr6B | 433033250 | 433033997 | 747 | False | 1186.000000 | 1186 | 95.327000 | 6924 | 7670 | 1 | chr6B.!!$F2 | 746 |
20 | TraesCS5B01G144500 | chr6B | 179665560 | 179666136 | 576 | True | 989.000000 | 989 | 97.574000 | 8712 | 9288 | 1 | chr6B.!!$R1 | 576 |
21 | TraesCS5B01G144500 | chr6B | 432862527 | 432863040 | 513 | True | 791.000000 | 791 | 94.030000 | 4978 | 5512 | 1 | chr6B.!!$R2 | 534 |
22 | TraesCS5B01G144500 | chr6B | 716501821 | 716502471 | 650 | False | 778.000000 | 778 | 88.619000 | 4869 | 5509 | 1 | chr6B.!!$F4 | 640 |
23 | TraesCS5B01G144500 | chr1D | 260314715 | 260316034 | 1319 | True | 1812.000000 | 1812 | 91.465000 | 3073 | 4392 | 1 | chr1D.!!$R1 | 1319 |
24 | TraesCS5B01G144500 | chr1D | 269501864 | 269502461 | 597 | False | 444.000000 | 444 | 80.581000 | 1436 | 2080 | 1 | chr1D.!!$F1 | 644 |
25 | TraesCS5B01G144500 | chr7D | 633856125 | 633857467 | 1342 | True | 1757.000000 | 1757 | 90.395000 | 3063 | 4395 | 1 | chr7D.!!$R1 | 1332 |
26 | TraesCS5B01G144500 | chr3A | 541218795 | 541219440 | 645 | True | 1182.000000 | 1182 | 99.690000 | 4867 | 5512 | 1 | chr3A.!!$R1 | 645 |
27 | TraesCS5B01G144500 | chr3A | 515905280 | 515912821 | 7541 | False | 687.500000 | 737 | 87.056750 | 7025 | 7685 | 4 | chr3A.!!$F2 | 660 |
28 | TraesCS5B01G144500 | chrUn | 442743649 | 442744396 | 747 | False | 1175.000000 | 1175 | 95.060000 | 6924 | 7670 | 1 | chrUn.!!$F2 | 746 |
29 | TraesCS5B01G144500 | chrUn | 473789635 | 473790186 | 551 | False | 981.000000 | 981 | 98.732000 | 5647 | 6198 | 1 | chrUn.!!$F3 | 551 |
30 | TraesCS5B01G144500 | chrUn | 460439437 | 460439951 | 514 | True | 883.000000 | 883 | 97.670000 | 7157 | 7670 | 1 | chrUn.!!$R4 | 513 |
31 | TraesCS5B01G144500 | chrUn | 463853015 | 463853529 | 514 | True | 878.000000 | 878 | 97.476000 | 7157 | 7670 | 1 | chrUn.!!$R5 | 513 |
32 | TraesCS5B01G144500 | chrUn | 221868828 | 221869439 | 611 | False | 876.000000 | 876 | 92.419000 | 5613 | 6231 | 1 | chrUn.!!$F1 | 618 |
33 | TraesCS5B01G144500 | chrUn | 261952575 | 261953186 | 611 | True | 876.000000 | 876 | 92.419000 | 5613 | 6231 | 1 | chrUn.!!$R3 | 618 |
34 | TraesCS5B01G144500 | chrUn | 15453549 | 15454205 | 656 | True | 782.000000 | 782 | 88.571000 | 4867 | 5512 | 1 | chrUn.!!$R1 | 645 |
35 | TraesCS5B01G144500 | chrUn | 242486000 | 242486655 | 655 | True | 760.000000 | 760 | 87.897000 | 4866 | 5512 | 1 | chrUn.!!$R2 | 646 |
36 | TraesCS5B01G144500 | chr4A | 687539664 | 687540282 | 618 | True | 1099.000000 | 1099 | 98.708000 | 5613 | 6231 | 1 | chr4A.!!$R2 | 618 |
37 | TraesCS5B01G144500 | chr4A | 646131068 | 646131644 | 576 | True | 977.000000 | 977 | 97.227000 | 8712 | 9288 | 1 | chr4A.!!$R1 | 576 |
38 | TraesCS5B01G144500 | chr4A | 725914341 | 725914996 | 655 | False | 769.000000 | 769 | 88.253000 | 4866 | 5509 | 1 | chr4A.!!$F1 | 643 |
39 | TraesCS5B01G144500 | chr2B | 165393319 | 165393895 | 576 | False | 1005.000000 | 1005 | 98.094000 | 8712 | 9288 | 1 | chr2B.!!$F1 | 576 |
40 | TraesCS5B01G144500 | chr3D | 285000636 | 285001212 | 576 | True | 983.000000 | 983 | 97.400000 | 8712 | 9288 | 1 | chr3D.!!$R1 | 576 |
41 | TraesCS5B01G144500 | chr3D | 124500691 | 124501302 | 611 | False | 859.000000 | 859 | 92.020000 | 4898 | 5509 | 1 | chr3D.!!$F1 | 611 |
42 | TraesCS5B01G144500 | chr3D | 96613680 | 96616961 | 3281 | True | 427.666667 | 893 | 97.013333 | 5613 | 7030 | 3 | chr3D.!!$R2 | 1417 |
43 | TraesCS5B01G144500 | chr6D | 454499831 | 454500407 | 576 | False | 977.000000 | 977 | 97.227000 | 8712 | 9288 | 1 | chr6D.!!$F2 | 576 |
44 | TraesCS5B01G144500 | chr6D | 213396464 | 213397087 | 623 | False | 876.000000 | 876 | 92.147000 | 5613 | 6231 | 1 | chr6D.!!$F1 | 618 |
45 | TraesCS5B01G144500 | chr6D | 254140456 | 254141001 | 545 | True | 268.000000 | 268 | 77.029000 | 7047 | 7589 | 1 | chr6D.!!$R1 | 542 |
46 | TraesCS5B01G144500 | chr6A | 90747241 | 90747896 | 655 | True | 776.000000 | 776 | 88.404000 | 4867 | 5512 | 1 | chr6A.!!$R1 | 645 |
47 | TraesCS5B01G144500 | chr4B | 420427482 | 420428135 | 653 | False | 750.000000 | 750 | 87.709000 | 4866 | 5509 | 1 | chr4B.!!$F2 | 643 |
48 | TraesCS5B01G144500 | chr1A | 333507776 | 333508379 | 603 | True | 436.000000 | 436 | 80.569000 | 1607 | 2213 | 1 | chr1A.!!$R1 | 606 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
119 | 133 | 0.534203 | AAACCACGAACACCAGCGAT | 60.534 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 | F |
644 | 696 | 0.761187 | TCTGAGACCTTGCAAGCAGT | 59.239 | 50.000 | 21.43 | 14.26 | 0.00 | 4.40 | F |
1217 | 1274 | 0.031178 | CAGAAACTTGCCACACCTGC | 59.969 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 | F |
1481 | 1539 | 1.001487 | CTTGCACGGCAGAATTTGTGA | 60.001 | 47.619 | 0.00 | 0.00 | 40.61 | 3.58 | F |
2676 | 2839 | 1.164411 | TGCATTTGGGAAGTAGCACG | 58.836 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 | F |
3337 | 3511 | 0.537188 | GGCGACTTCAAGATCTGGGA | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 | F |
4361 | 4545 | 0.037326 | ATGGCTGTATACATCGCCGG | 60.037 | 55.000 | 23.71 | 0.00 | 45.36 | 6.13 | F |
6108 | 14988 | 1.338389 | GCCACCCTGTCTTAGCGTAAA | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 | F |
7017 | 15897 | 0.179000 | CCACTGCCACCCTGTCTATC | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 2.08 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1217 | 1274 | 0.540923 | CCCTGCTCCCTCTTCTTGAG | 59.459 | 60.000 | 0.00 | 0.00 | 42.30 | 3.02 | R |
1481 | 1539 | 1.311059 | GCATTCCCCATGAACCCCT | 59.689 | 57.895 | 0.00 | 0.00 | 35.31 | 4.79 | R |
2977 | 3145 | 0.318441 | ACAGTCCATCGGTGACACTG | 59.682 | 55.000 | 20.28 | 20.28 | 39.79 | 3.66 | R |
2989 | 3157 | 3.391296 | AGTGGCTAGAAAAGAACAGTCCA | 59.609 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 | R |
3877 | 4054 | 0.108898 | CACTGCTCCTCCTCTTGTCG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 | R |
4526 | 4711 | 1.009829 | CCGTGCTTCTTGGCTATGTC | 58.990 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 | R |
6110 | 14990 | 0.960861 | ATGACGTCTGCCTCGACTCA | 60.961 | 55.000 | 17.92 | 0.00 | 0.00 | 3.41 | R |
7984 | 22971 | 0.462581 | GGTGAGCCAGCATGATCGAA | 60.463 | 55.000 | 0.00 | 0.00 | 39.69 | 3.71 | R |
8882 | 23873 | 0.105224 | TGACGTTCTCTCCGCCAAAA | 59.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
33 | 35 | 7.425606 | GTGCTGGAATGAGAAAAGTAAGAAAA | 58.574 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
55 | 57 | 8.422577 | AAAAGGAAACCTATTTGCATTAGAGT | 57.577 | 30.769 | 5.91 | 1.04 | 38.55 | 3.24 |
56 | 58 | 9.528489 | AAAAGGAAACCTATTTGCATTAGAGTA | 57.472 | 29.630 | 5.91 | 0.00 | 38.55 | 2.59 |
57 | 59 | 9.528489 | AAAGGAAACCTATTTGCATTAGAGTAA | 57.472 | 29.630 | 5.91 | 0.00 | 38.55 | 2.24 |
58 | 60 | 9.700831 | AAGGAAACCTATTTGCATTAGAGTAAT | 57.299 | 29.630 | 5.91 | 0.00 | 38.55 | 1.89 |
59 | 61 | 9.700831 | AGGAAACCTATTTGCATTAGAGTAATT | 57.299 | 29.630 | 5.91 | 0.00 | 38.55 | 1.40 |
60 | 62 | 9.952188 | GGAAACCTATTTGCATTAGAGTAATTC | 57.048 | 33.333 | 5.91 | 4.81 | 36.24 | 2.17 |
89 | 91 | 2.956333 | GCTAGGGTTCTTCTCTCTCTCC | 59.044 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
90 | 92 | 2.543037 | AGGGTTCTTCTCTCTCTCCC | 57.457 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
92 | 94 | 1.007842 | GGGTTCTTCTCTCTCTCCCCT | 59.992 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
119 | 133 | 0.534203 | AAACCACGAACACCAGCGAT | 60.534 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
165 | 179 | 2.102084 | CAGTGAGCCTAGATTAGCTGCA | 59.898 | 50.000 | 1.02 | 0.00 | 40.11 | 4.41 |
199 | 213 | 3.711704 | CCTTTTCCCAGTGAGCCTAGATA | 59.288 | 47.826 | 0.00 | 0.00 | 0.00 | 1.98 |
288 | 312 | 1.134371 | CGTCCTTCCTCAATCCTTCCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.97 |
477 | 505 | 2.287915 | GGCTGTTAGCGTAATCATGGTG | 59.712 | 50.000 | 0.00 | 0.00 | 43.62 | 4.17 |
508 | 544 | 9.003658 | AGTTTTATATAGTAACCATGCTCATGC | 57.996 | 33.333 | 4.40 | 0.00 | 37.49 | 4.06 |
522 | 558 | 2.476185 | GCTCATGCATGAACGGTAACAC | 60.476 | 50.000 | 28.39 | 7.51 | 39.41 | 3.32 |
523 | 559 | 2.741517 | CTCATGCATGAACGGTAACACA | 59.258 | 45.455 | 28.39 | 3.62 | 36.18 | 3.72 |
526 | 562 | 2.499197 | TGCATGAACGGTAACACATGT | 58.501 | 42.857 | 0.00 | 0.00 | 41.24 | 3.21 |
528 | 564 | 3.433957 | TGCATGAACGGTAACACATGTAC | 59.566 | 43.478 | 0.00 | 0.00 | 41.24 | 2.90 |
529 | 565 | 3.433957 | GCATGAACGGTAACACATGTACA | 59.566 | 43.478 | 0.00 | 0.00 | 41.24 | 2.90 |
531 | 567 | 5.617609 | CATGAACGGTAACACATGTACAAG | 58.382 | 41.667 | 0.00 | 0.00 | 37.43 | 3.16 |
532 | 568 | 4.946445 | TGAACGGTAACACATGTACAAGA | 58.054 | 39.130 | 4.87 | 0.00 | 0.00 | 3.02 |
534 | 570 | 4.595762 | ACGGTAACACATGTACAAGACT | 57.404 | 40.909 | 4.87 | 0.00 | 0.00 | 3.24 |
535 | 571 | 4.304110 | ACGGTAACACATGTACAAGACTG | 58.696 | 43.478 | 4.87 | 0.00 | 0.00 | 3.51 |
536 | 572 | 4.038282 | ACGGTAACACATGTACAAGACTGA | 59.962 | 41.667 | 4.87 | 0.00 | 0.00 | 3.41 |
573 | 609 | 7.798516 | CGCCTGCAATAATAAAATACAGTACAG | 59.201 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
574 | 610 | 8.621286 | GCCTGCAATAATAAAATACAGTACAGT | 58.379 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
602 | 646 | 3.772025 | ACATCTTCTTGCAGCCTAGTACT | 59.228 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
603 | 647 | 4.956700 | ACATCTTCTTGCAGCCTAGTACTA | 59.043 | 41.667 | 1.89 | 1.89 | 0.00 | 1.82 |
604 | 648 | 5.068460 | ACATCTTCTTGCAGCCTAGTACTAG | 59.932 | 44.000 | 21.11 | 21.11 | 0.00 | 2.57 |
605 | 649 | 4.601084 | TCTTCTTGCAGCCTAGTACTAGT | 58.399 | 43.478 | 24.84 | 8.03 | 0.00 | 2.57 |
644 | 696 | 0.761187 | TCTGAGACCTTGCAAGCAGT | 59.239 | 50.000 | 21.43 | 14.26 | 0.00 | 4.40 |
680 | 732 | 1.809133 | TGTTCCACCAACCAGGACTA | 58.191 | 50.000 | 0.00 | 0.00 | 41.22 | 2.59 |
695 | 747 | 1.103803 | GACTACGCATCTCCTCACCA | 58.896 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
760 | 813 | 1.153862 | GTGCTCTCTGCTCTGGTCG | 60.154 | 63.158 | 0.00 | 0.00 | 43.37 | 4.79 |
795 | 848 | 3.396685 | AGCTTCTCTCTCAGGGTATGT | 57.603 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
801 | 854 | 6.183360 | GCTTCTCTCTCAGGGTATGTCAAATA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
873 | 927 | 4.760530 | AATGGCACTGTCTTATCTGCTA | 57.239 | 40.909 | 0.00 | 0.00 | 0.00 | 3.49 |
874 | 928 | 3.808466 | TGGCACTGTCTTATCTGCTAG | 57.192 | 47.619 | 0.00 | 0.00 | 0.00 | 3.42 |
875 | 929 | 3.099905 | TGGCACTGTCTTATCTGCTAGT | 58.900 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
968 | 1022 | 4.214119 | CCACCCAGCAAATATGTATCTTCG | 59.786 | 45.833 | 0.00 | 0.00 | 0.00 | 3.79 |
972 | 1026 | 5.388111 | CCAGCAAATATGTATCTTCGCATG | 58.612 | 41.667 | 0.00 | 0.00 | 0.00 | 4.06 |
1000 | 1054 | 5.603813 | TGATCATCTCTCTCTCTCTCTCTCA | 59.396 | 44.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1001 | 1055 | 6.271624 | TGATCATCTCTCTCTCTCTCTCTCAT | 59.728 | 42.308 | 0.00 | 0.00 | 0.00 | 2.90 |
1002 | 1056 | 5.861727 | TCATCTCTCTCTCTCTCTCTCATG | 58.138 | 45.833 | 0.00 | 0.00 | 0.00 | 3.07 |
1049 | 1106 | 2.583520 | GCTGCTGCTGCTACCTCT | 59.416 | 61.111 | 22.10 | 0.00 | 40.48 | 3.69 |
1089 | 1146 | 3.607741 | TCTCTTCTCCTACCTGTACACG | 58.392 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
1170 | 1227 | 2.447047 | TCCCAAGCCTTCTTTCCTCTTT | 59.553 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
1212 | 1269 | 3.149196 | GAGAATCCAGAAACTTGCCACA | 58.851 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
1217 | 1274 | 0.031178 | CAGAAACTTGCCACACCTGC | 59.969 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1242 | 1299 | 2.041405 | GAGGGAGCAGGGCCTACT | 60.041 | 66.667 | 5.81 | 5.81 | 0.00 | 2.57 |
1481 | 1539 | 1.001487 | CTTGCACGGCAGAATTTGTGA | 60.001 | 47.619 | 0.00 | 0.00 | 40.61 | 3.58 |
1542 | 1601 | 3.399330 | TCGAGGCCTTTTGTAGTTTCAG | 58.601 | 45.455 | 6.77 | 0.00 | 0.00 | 3.02 |
1629 | 1689 | 8.680903 | TCCTAGAATTTCGTAGTCGTTTAGATT | 58.319 | 33.333 | 0.00 | 0.00 | 38.33 | 2.40 |
1651 | 1711 | 8.819015 | AGATTATGTACTATATAGCGTGTCTCG | 58.181 | 37.037 | 9.78 | 0.00 | 43.12 | 4.04 |
1917 | 1987 | 8.425577 | AAGCATACAAACTCTACATGTCATAC | 57.574 | 34.615 | 0.00 | 0.00 | 0.00 | 2.39 |
1961 | 2031 | 1.269257 | GCCAGTTGCAAGTCTTTGGAC | 60.269 | 52.381 | 3.08 | 0.00 | 40.30 | 4.02 |
2209 | 2372 | 9.486497 | TCAACAATAATGCTTGCTTAAAAATGA | 57.514 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
2669 | 2832 | 8.225603 | ACTGTATAGTTTATGCATTTGGGAAG | 57.774 | 34.615 | 3.54 | 0.00 | 31.66 | 3.46 |
2676 | 2839 | 1.164411 | TGCATTTGGGAAGTAGCACG | 58.836 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2696 | 2859 | 7.771183 | AGCACGAATTTTCCAATAACATGTAT | 58.229 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
2740 | 2903 | 6.508777 | GGTCAGTACCTGTCTCAGATATTTC | 58.491 | 44.000 | 0.00 | 0.00 | 43.08 | 2.17 |
2777 | 2940 | 4.780815 | TCCGCCAGTATCAGATTCATTTT | 58.219 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
2783 | 2946 | 6.205658 | GCCAGTATCAGATTCATTTTAGGGTC | 59.794 | 42.308 | 0.00 | 0.00 | 0.00 | 4.46 |
2880 | 3043 | 6.528014 | TGCTTTACAATTTTCATGCAAGTG | 57.472 | 33.333 | 0.00 | 4.05 | 0.00 | 3.16 |
2986 | 3154 | 5.892568 | AGTATATCGAAGTTCAGTGTCACC | 58.107 | 41.667 | 3.32 | 0.00 | 0.00 | 4.02 |
2989 | 3157 | 1.611977 | TCGAAGTTCAGTGTCACCGAT | 59.388 | 47.619 | 3.32 | 0.00 | 0.00 | 4.18 |
2998 | 3166 | 1.000955 | AGTGTCACCGATGGACTGTTC | 59.999 | 52.381 | 0.00 | 0.00 | 36.26 | 3.18 |
3044 | 3212 | 8.074474 | CATGATTTGACACATGTTTTGCTTTA | 57.926 | 30.769 | 0.00 | 0.00 | 38.98 | 1.85 |
3045 | 3213 | 8.549548 | CATGATTTGACACATGTTTTGCTTTAA | 58.450 | 29.630 | 0.00 | 0.00 | 38.98 | 1.52 |
3071 | 3242 | 4.444081 | AGTAGCCCGAGTCGCCCT | 62.444 | 66.667 | 7.12 | 7.68 | 0.00 | 5.19 |
3141 | 3313 | 4.507916 | TCCTCCTCCTCCCTCGCG | 62.508 | 72.222 | 0.00 | 0.00 | 0.00 | 5.87 |
3337 | 3511 | 0.537188 | GGCGACTTCAAGATCTGGGA | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
3377 | 3551 | 2.202756 | GGCGTCGTGACCAGATCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
3455 | 3631 | 2.753966 | GCGATGGCAAGTGCGACAT | 61.754 | 57.895 | 0.00 | 0.00 | 43.26 | 3.06 |
3477 | 3653 | 2.581354 | GCAGCTGGACGGATCTGT | 59.419 | 61.111 | 17.12 | 6.97 | 0.00 | 3.41 |
3482 | 3658 | 1.517832 | CTGGACGGATCTGTGGGAC | 59.482 | 63.158 | 13.13 | 0.00 | 0.00 | 4.46 |
3632 | 3808 | 3.394836 | GAAGGGACCAGCGAGGCT | 61.395 | 66.667 | 0.00 | 0.00 | 43.14 | 4.58 |
3682 | 3858 | 1.792949 | GATGAAAATCGCGCCGACTAT | 59.207 | 47.619 | 0.00 | 0.00 | 39.18 | 2.12 |
3759 | 3935 | 4.284123 | GCAGTTGGCGTCATCAGA | 57.716 | 55.556 | 0.27 | 0.00 | 0.00 | 3.27 |
3766 | 3942 | 2.105128 | GCGTCATCAGACTCGGGG | 59.895 | 66.667 | 0.00 | 0.00 | 42.73 | 5.73 |
3840 | 4016 | 3.984508 | TCTTAGTATCGCTTTCCCTCG | 57.015 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
3870 | 4047 | 3.765381 | TCATTTTGGAGCAAGTGATGGA | 58.235 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
3877 | 4054 | 0.106819 | AGCAAGTGATGGATGGAGGC | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3893 | 4070 | 2.650116 | GGCGACAAGAGGAGGAGCA | 61.650 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
3954 | 4131 | 2.771089 | CATGGCGCCATGTAGATTAGT | 58.229 | 47.619 | 46.57 | 22.13 | 46.20 | 2.24 |
3976 | 4153 | 2.763933 | GTCTGATGTGCGATGATGGAT | 58.236 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
3977 | 4154 | 3.612479 | CGTCTGATGTGCGATGATGGATA | 60.612 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
4084 | 4266 | 1.803453 | ATGGATTGGTGGCAGGTGGT | 61.803 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4163 | 4345 | 3.849951 | CATACCCGGCAGGCGTCT | 61.850 | 66.667 | 16.17 | 1.84 | 40.58 | 4.18 |
4210 | 4392 | 1.192146 | AGGTTTGGCTGCGAGGTCTA | 61.192 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4249 | 4431 | 1.002888 | CTATCAGCGCCCCTTCATCAT | 59.997 | 52.381 | 2.29 | 0.00 | 0.00 | 2.45 |
4265 | 4447 | 5.003096 | TCATCATCTGGATAGGAGTAGCA | 57.997 | 43.478 | 0.00 | 0.00 | 33.95 | 3.49 |
4360 | 4544 | 1.795768 | AATGGCTGTATACATCGCCG | 58.204 | 50.000 | 23.71 | 7.88 | 45.36 | 6.46 |
4361 | 4545 | 0.037326 | ATGGCTGTATACATCGCCGG | 60.037 | 55.000 | 23.71 | 0.00 | 45.36 | 6.13 |
4394 | 4579 | 2.290960 | CGGGGTCTTCCTCCTTTTCAAT | 60.291 | 50.000 | 0.00 | 0.00 | 35.33 | 2.57 |
4396 | 4581 | 4.160329 | GGGGTCTTCCTCCTTTTCAATTT | 58.840 | 43.478 | 0.00 | 0.00 | 35.33 | 1.82 |
4397 | 4582 | 4.593206 | GGGGTCTTCCTCCTTTTCAATTTT | 59.407 | 41.667 | 0.00 | 0.00 | 35.33 | 1.82 |
4398 | 4583 | 5.071788 | GGGGTCTTCCTCCTTTTCAATTTTT | 59.928 | 40.000 | 0.00 | 0.00 | 35.33 | 1.94 |
4449 | 4634 | 1.504359 | TGCTTGAATTTTGCTGCTGC | 58.496 | 45.000 | 8.89 | 8.89 | 40.20 | 5.25 |
4526 | 4711 | 1.875576 | GCATCCGTAGCCTCATCTTGG | 60.876 | 57.143 | 0.00 | 0.00 | 0.00 | 3.61 |
4559 | 4744 | 1.970917 | GCACGGACAAGATTCAGCGG | 61.971 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
4615 | 4800 | 3.243128 | GGGTTCTAAAGCCGCTTCA | 57.757 | 52.632 | 5.98 | 0.00 | 39.57 | 3.02 |
4633 | 4818 | 1.344438 | TCATTCTCTTCGTGCACACCT | 59.656 | 47.619 | 18.64 | 0.00 | 0.00 | 4.00 |
4810 | 4995 | 2.539346 | TAGACTTCGACAAGCTACGC | 57.461 | 50.000 | 0.00 | 0.00 | 32.09 | 4.42 |
4813 | 4998 | 1.790623 | GACTTCGACAAGCTACGCAAA | 59.209 | 47.619 | 0.00 | 0.00 | 32.09 | 3.68 |
4842 | 5027 | 3.027974 | GGTACGTATGATCAAGCCTCC | 57.972 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4857 | 5042 | 2.507471 | AGCCTCCCTCTTGTAAATGAGG | 59.493 | 50.000 | 7.73 | 7.73 | 46.91 | 3.86 |
4858 | 5043 | 2.239907 | GCCTCCCTCTTGTAAATGAGGT | 59.760 | 50.000 | 12.68 | 0.00 | 46.17 | 3.85 |
4859 | 5044 | 3.308473 | GCCTCCCTCTTGTAAATGAGGTT | 60.308 | 47.826 | 12.68 | 0.00 | 46.17 | 3.50 |
5730 | 13027 | 1.729838 | GACACCGAGACGAGCACAC | 60.730 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
5920 | 13500 | 1.597854 | CACGTGACACCACAGCCAT | 60.598 | 57.895 | 10.90 | 0.00 | 43.34 | 4.40 |
6041 | 14921 | 2.126965 | CGAGTCGAGGCGAACGTT | 60.127 | 61.111 | 6.73 | 0.00 | 37.72 | 3.99 |
6042 | 14922 | 2.426183 | CGAGTCGAGGCGAACGTTG | 61.426 | 63.158 | 5.00 | 0.00 | 37.72 | 4.10 |
6062 | 14942 | 4.247612 | GCGGTAGCGACGACGGAT | 62.248 | 66.667 | 20.16 | 0.00 | 40.15 | 4.18 |
6065 | 14945 | 2.654404 | GTAGCGACGACGGATGCC | 60.654 | 66.667 | 9.67 | 0.00 | 40.15 | 4.40 |
6087 | 14967 | 2.279186 | CGAGCACGTGACACCACA | 60.279 | 61.111 | 22.23 | 0.00 | 43.34 | 4.17 |
6088 | 14968 | 2.302952 | CGAGCACGTGACACCACAG | 61.303 | 63.158 | 22.23 | 0.00 | 43.34 | 3.66 |
6091 | 14971 | 2.203001 | CACGTGACACCACAGCCA | 60.203 | 61.111 | 10.90 | 0.00 | 43.34 | 4.75 |
6094 | 14974 | 2.594592 | GTGACACCACAGCCACCC | 60.595 | 66.667 | 0.00 | 0.00 | 42.72 | 4.61 |
6108 | 14988 | 1.338389 | GCCACCCTGTCTTAGCGTAAA | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
6110 | 14990 | 2.028385 | CCACCCTGTCTTAGCGTAAAGT | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
6121 | 15001 | 0.388134 | GCGTAAAGTGAGTCGAGGCA | 60.388 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
6128 | 15008 | 1.599797 | TGAGTCGAGGCAGACGTCA | 60.600 | 57.895 | 19.50 | 8.52 | 45.26 | 4.35 |
6131 | 15011 | 1.583967 | GTCGAGGCAGACGTCATCG | 60.584 | 63.158 | 19.50 | 19.66 | 43.34 | 3.84 |
6138 | 15018 | 1.298413 | CAGACGTCATCGCGGTAGG | 60.298 | 63.158 | 19.50 | 0.01 | 41.18 | 3.18 |
6144 | 15024 | 1.527611 | TCATCGCGGTAGGGACGAT | 60.528 | 57.895 | 6.13 | 0.00 | 46.73 | 3.73 |
6173 | 15053 | 2.027605 | CGAGCACGTGACACCACT | 59.972 | 61.111 | 22.23 | 5.10 | 41.06 | 4.00 |
6174 | 15054 | 2.302952 | CGAGCACGTGACACCACTG | 61.303 | 63.158 | 22.23 | 0.00 | 41.06 | 3.66 |
7015 | 15895 | 1.152118 | ACCACTGCCACCCTGTCTA | 60.152 | 57.895 | 0.00 | 0.00 | 0.00 | 2.59 |
7016 | 15896 | 0.547712 | ACCACTGCCACCCTGTCTAT | 60.548 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
7017 | 15897 | 0.179000 | CCACTGCCACCCTGTCTATC | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 2.08 |
7018 | 15898 | 1.198713 | CACTGCCACCCTGTCTATCT | 58.801 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
7019 | 15899 | 1.556911 | CACTGCCACCCTGTCTATCTT | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
7020 | 15900 | 2.766263 | CACTGCCACCCTGTCTATCTTA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
7021 | 15901 | 3.034635 | ACTGCCACCCTGTCTATCTTAG | 58.965 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
7022 | 15902 | 2.366916 | CTGCCACCCTGTCTATCTTAGG | 59.633 | 54.545 | 0.00 | 0.00 | 0.00 | 2.69 |
7028 | 15908 | 4.850347 | CCCTGTCTATCTTAGGGTTACG | 57.150 | 50.000 | 0.00 | 0.00 | 45.00 | 3.18 |
7036 | 16176 | 6.759827 | GTCTATCTTAGGGTTACGCAAAATGA | 59.240 | 38.462 | 1.60 | 0.00 | 0.00 | 2.57 |
7039 | 16179 | 7.730364 | ATCTTAGGGTTACGCAAAATGATAG | 57.270 | 36.000 | 1.60 | 0.00 | 0.00 | 2.08 |
7041 | 16181 | 7.332557 | TCTTAGGGTTACGCAAAATGATAGAA | 58.667 | 34.615 | 1.60 | 0.00 | 0.00 | 2.10 |
7044 | 16184 | 5.944007 | AGGGTTACGCAAAATGATAGAAAGT | 59.056 | 36.000 | 1.60 | 0.00 | 0.00 | 2.66 |
7049 | 16189 | 5.931532 | ACGCAAAATGATAGAAAGTGACAG | 58.068 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
7735 | 22718 | 9.317936 | CAAGATCAATACTACTAGCATGTTTGA | 57.682 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
7766 | 22749 | 6.647481 | ACAAACGTATGTATTGCTGAGTAACA | 59.353 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
7773 | 22757 | 5.001232 | TGTATTGCTGAGTAACAAACCTCC | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
7783 | 22769 | 5.970592 | AGTAACAAACCTCCGATAACTACC | 58.029 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
7845 | 22832 | 6.000891 | TGTGCAAAGTGCTAATACAAGAAG | 57.999 | 37.500 | 1.43 | 0.00 | 45.31 | 2.85 |
7846 | 22833 | 4.853743 | GTGCAAAGTGCTAATACAAGAAGC | 59.146 | 41.667 | 1.43 | 0.00 | 45.31 | 3.86 |
7852 | 22839 | 5.256474 | AGTGCTAATACAAGAAGCATGGTT | 58.744 | 37.500 | 10.50 | 10.50 | 46.99 | 3.67 |
7854 | 22841 | 6.209391 | AGTGCTAATACAAGAAGCATGGTTTT | 59.791 | 34.615 | 12.13 | 2.78 | 46.99 | 2.43 |
7855 | 22842 | 7.393234 | AGTGCTAATACAAGAAGCATGGTTTTA | 59.607 | 33.333 | 12.13 | 4.52 | 46.99 | 1.52 |
7856 | 22843 | 7.484959 | GTGCTAATACAAGAAGCATGGTTTTAC | 59.515 | 37.037 | 12.13 | 0.00 | 46.99 | 2.01 |
7931 | 22918 | 4.069232 | TCACGCGGGAAGCTCTGG | 62.069 | 66.667 | 9.60 | 0.00 | 45.59 | 3.86 |
7984 | 22971 | 3.365472 | GAAAGGCACCAATATCAGGGTT | 58.635 | 45.455 | 0.00 | 0.00 | 34.45 | 4.11 |
8058 | 23045 | 1.544246 | GTTTGATCCGGGAAGGTTTGG | 59.456 | 52.381 | 0.00 | 0.00 | 41.99 | 3.28 |
8170 | 23157 | 1.000506 | GTTGAGGTCAAGGTCGTGCTA | 59.999 | 52.381 | 0.00 | 0.00 | 36.39 | 3.49 |
8283 | 23270 | 1.212616 | CCGCTGATTCTTAGGAAGCG | 58.787 | 55.000 | 11.30 | 11.30 | 40.35 | 4.68 |
8381 | 23369 | 5.749596 | TGGATGTTGACTGTAAACACTTG | 57.250 | 39.130 | 12.82 | 0.00 | 40.16 | 3.16 |
8382 | 23370 | 5.189928 | TGGATGTTGACTGTAAACACTTGT | 58.810 | 37.500 | 12.82 | 0.00 | 40.16 | 3.16 |
8384 | 23372 | 6.824196 | TGGATGTTGACTGTAAACACTTGTTA | 59.176 | 34.615 | 12.82 | 0.00 | 40.16 | 2.41 |
8385 | 23373 | 7.011950 | TGGATGTTGACTGTAAACACTTGTTAG | 59.988 | 37.037 | 12.82 | 0.00 | 40.16 | 2.34 |
8386 | 23374 | 7.012044 | GGATGTTGACTGTAAACACTTGTTAGT | 59.988 | 37.037 | 12.82 | 0.00 | 40.16 | 2.24 |
8387 | 23375 | 8.951787 | ATGTTGACTGTAAACACTTGTTAGTA | 57.048 | 30.769 | 12.82 | 0.00 | 40.16 | 1.82 |
8388 | 23376 | 8.951787 | TGTTGACTGTAAACACTTGTTAGTAT | 57.048 | 30.769 | 6.63 | 0.00 | 37.25 | 2.12 |
8389 | 23377 | 8.822855 | TGTTGACTGTAAACACTTGTTAGTATG | 58.177 | 33.333 | 6.63 | 0.00 | 37.25 | 2.39 |
8390 | 23378 | 8.823818 | GTTGACTGTAAACACTTGTTAGTATGT | 58.176 | 33.333 | 3.07 | 0.00 | 37.25 | 2.29 |
8413 | 23404 | 8.288689 | TGTTATACTACTGTGCATGAGAGTAA | 57.711 | 34.615 | 0.00 | 0.00 | 30.31 | 2.24 |
8428 | 23419 | 7.516481 | CATGAGAGTAACAATTCTTGTCACTG | 58.484 | 38.462 | 0.61 | 0.00 | 42.12 | 3.66 |
8429 | 23420 | 5.466728 | TGAGAGTAACAATTCTTGTCACTGC | 59.533 | 40.000 | 0.61 | 0.00 | 42.12 | 4.40 |
8430 | 23421 | 5.368145 | AGAGTAACAATTCTTGTCACTGCA | 58.632 | 37.500 | 0.61 | 0.00 | 42.12 | 4.41 |
8431 | 23422 | 5.237344 | AGAGTAACAATTCTTGTCACTGCAC | 59.763 | 40.000 | 0.61 | 0.00 | 42.12 | 4.57 |
8432 | 23423 | 5.126067 | AGTAACAATTCTTGTCACTGCACT | 58.874 | 37.500 | 0.00 | 0.00 | 40.58 | 4.40 |
8433 | 23424 | 4.989279 | AACAATTCTTGTCACTGCACTT | 57.011 | 36.364 | 0.00 | 0.00 | 44.59 | 3.16 |
8434 | 23425 | 4.989279 | ACAATTCTTGTCACTGCACTTT | 57.011 | 36.364 | 0.00 | 0.00 | 40.56 | 2.66 |
8435 | 23426 | 5.329035 | ACAATTCTTGTCACTGCACTTTT | 57.671 | 34.783 | 0.00 | 0.00 | 40.56 | 2.27 |
8436 | 23427 | 5.723295 | ACAATTCTTGTCACTGCACTTTTT | 58.277 | 33.333 | 0.00 | 0.00 | 40.56 | 1.94 |
8437 | 23428 | 5.807011 | ACAATTCTTGTCACTGCACTTTTTC | 59.193 | 36.000 | 0.00 | 0.00 | 40.56 | 2.29 |
8438 | 23429 | 3.673746 | TCTTGTCACTGCACTTTTTCG | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
8439 | 23430 | 3.006940 | TCTTGTCACTGCACTTTTTCGT | 58.993 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
8440 | 23431 | 3.438781 | TCTTGTCACTGCACTTTTTCGTT | 59.561 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
8441 | 23432 | 3.840890 | TGTCACTGCACTTTTTCGTTT | 57.159 | 38.095 | 0.00 | 0.00 | 0.00 | 3.60 |
8442 | 23433 | 4.167554 | TGTCACTGCACTTTTTCGTTTT | 57.832 | 36.364 | 0.00 | 0.00 | 0.00 | 2.43 |
8443 | 23434 | 5.298197 | TGTCACTGCACTTTTTCGTTTTA | 57.702 | 34.783 | 0.00 | 0.00 | 0.00 | 1.52 |
8444 | 23435 | 5.885881 | TGTCACTGCACTTTTTCGTTTTAT | 58.114 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
8445 | 23436 | 5.968848 | TGTCACTGCACTTTTTCGTTTTATC | 59.031 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
8446 | 23437 | 6.183360 | TGTCACTGCACTTTTTCGTTTTATCT | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
8447 | 23438 | 6.140737 | GTCACTGCACTTTTTCGTTTTATCTG | 59.859 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
8448 | 23439 | 5.399301 | CACTGCACTTTTTCGTTTTATCTGG | 59.601 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
8449 | 23440 | 4.295051 | TGCACTTTTTCGTTTTATCTGGC | 58.705 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
8450 | 23441 | 4.037446 | TGCACTTTTTCGTTTTATCTGGCT | 59.963 | 37.500 | 0.00 | 0.00 | 0.00 | 4.75 |
8451 | 23442 | 4.982295 | GCACTTTTTCGTTTTATCTGGCTT | 59.018 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
8452 | 23443 | 5.117135 | GCACTTTTTCGTTTTATCTGGCTTC | 59.883 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
8453 | 23444 | 6.438763 | CACTTTTTCGTTTTATCTGGCTTCT | 58.561 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
8454 | 23445 | 6.918022 | CACTTTTTCGTTTTATCTGGCTTCTT | 59.082 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
8455 | 23446 | 7.113544 | CACTTTTTCGTTTTATCTGGCTTCTTC | 59.886 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
8456 | 23447 | 4.921470 | TTCGTTTTATCTGGCTTCTTCG | 57.079 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
8457 | 23448 | 3.259064 | TCGTTTTATCTGGCTTCTTCGG | 58.741 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
8458 | 23449 | 3.000727 | CGTTTTATCTGGCTTCTTCGGT | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
8459 | 23450 | 3.062234 | CGTTTTATCTGGCTTCTTCGGTC | 59.938 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
8460 | 23451 | 3.973206 | TTTATCTGGCTTCTTCGGTCA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
8461 | 23452 | 3.973206 | TTATCTGGCTTCTTCGGTCAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
8462 | 23453 | 2.859165 | ATCTGGCTTCTTCGGTCAAA | 57.141 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8463 | 23454 | 2.859165 | TCTGGCTTCTTCGGTCAAAT | 57.141 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
8464 | 23455 | 2.426522 | TCTGGCTTCTTCGGTCAAATG | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
8465 | 23456 | 2.038426 | TCTGGCTTCTTCGGTCAAATGA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
8466 | 23457 | 3.012518 | CTGGCTTCTTCGGTCAAATGAT | 58.987 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
8467 | 23458 | 3.009723 | TGGCTTCTTCGGTCAAATGATC | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
8468 | 23459 | 2.356069 | GGCTTCTTCGGTCAAATGATCC | 59.644 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
8469 | 23460 | 3.274288 | GCTTCTTCGGTCAAATGATCCT | 58.726 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
8470 | 23461 | 4.442706 | GCTTCTTCGGTCAAATGATCCTA | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
8471 | 23462 | 4.876107 | GCTTCTTCGGTCAAATGATCCTAA | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
8472 | 23463 | 5.529060 | GCTTCTTCGGTCAAATGATCCTAAT | 59.471 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
8473 | 23464 | 6.293135 | GCTTCTTCGGTCAAATGATCCTAATC | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
8474 | 23465 | 5.611374 | TCTTCGGTCAAATGATCCTAATCC | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
8475 | 23466 | 5.366768 | TCTTCGGTCAAATGATCCTAATCCT | 59.633 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8476 | 23467 | 5.630415 | TCGGTCAAATGATCCTAATCCTT | 57.370 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
8477 | 23468 | 5.611374 | TCGGTCAAATGATCCTAATCCTTC | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
8478 | 23469 | 5.130311 | TCGGTCAAATGATCCTAATCCTTCA | 59.870 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
8479 | 23470 | 5.822519 | CGGTCAAATGATCCTAATCCTTCAA | 59.177 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8480 | 23471 | 6.238484 | CGGTCAAATGATCCTAATCCTTCAAC | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
8481 | 23472 | 6.830838 | GGTCAAATGATCCTAATCCTTCAACT | 59.169 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
8482 | 23473 | 7.340487 | GGTCAAATGATCCTAATCCTTCAACTT | 59.660 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
8483 | 23474 | 8.401709 | GTCAAATGATCCTAATCCTTCAACTTC | 58.598 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
8484 | 23475 | 7.280876 | TCAAATGATCCTAATCCTTCAACTTCG | 59.719 | 37.037 | 0.00 | 0.00 | 0.00 | 3.79 |
8485 | 23476 | 5.677319 | TGATCCTAATCCTTCAACTTCGT | 57.323 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
8486 | 23477 | 6.785337 | TGATCCTAATCCTTCAACTTCGTA | 57.215 | 37.500 | 0.00 | 0.00 | 0.00 | 3.43 |
8487 | 23478 | 6.570692 | TGATCCTAATCCTTCAACTTCGTAC | 58.429 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8488 | 23479 | 6.380274 | TGATCCTAATCCTTCAACTTCGTACT | 59.620 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
8489 | 23480 | 5.962433 | TCCTAATCCTTCAACTTCGTACTG | 58.038 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
8490 | 23481 | 5.479375 | TCCTAATCCTTCAACTTCGTACTGT | 59.521 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
8491 | 23482 | 6.660521 | TCCTAATCCTTCAACTTCGTACTGTA | 59.339 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
8492 | 23483 | 6.973474 | CCTAATCCTTCAACTTCGTACTGTAG | 59.027 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
8493 | 23484 | 6.585695 | AATCCTTCAACTTCGTACTGTAGA | 57.414 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
8494 | 23485 | 6.585695 | ATCCTTCAACTTCGTACTGTAGAA | 57.414 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
8495 | 23486 | 6.395426 | TCCTTCAACTTCGTACTGTAGAAA | 57.605 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
8496 | 23487 | 6.989659 | TCCTTCAACTTCGTACTGTAGAAAT | 58.010 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
8497 | 23488 | 7.439381 | TCCTTCAACTTCGTACTGTAGAAATT | 58.561 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
8498 | 23489 | 7.929785 | TCCTTCAACTTCGTACTGTAGAAATTT | 59.070 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
8499 | 23490 | 8.009974 | CCTTCAACTTCGTACTGTAGAAATTTG | 58.990 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
8500 | 23491 | 8.428186 | TTCAACTTCGTACTGTAGAAATTTGT | 57.572 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
8501 | 23492 | 8.068893 | TCAACTTCGTACTGTAGAAATTTGTC | 57.931 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
8502 | 23493 | 7.170320 | TCAACTTCGTACTGTAGAAATTTGTCC | 59.830 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
8503 | 23494 | 6.756221 | ACTTCGTACTGTAGAAATTTGTCCT | 58.244 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8504 | 23495 | 7.889469 | ACTTCGTACTGTAGAAATTTGTCCTA | 58.111 | 34.615 | 0.00 | 0.00 | 0.00 | 2.94 |
8505 | 23496 | 8.362639 | ACTTCGTACTGTAGAAATTTGTCCTAA | 58.637 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
8506 | 23497 | 9.367444 | CTTCGTACTGTAGAAATTTGTCCTAAT | 57.633 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
8508 | 23499 | 9.793252 | TCGTACTGTAGAAATTTGTCCTAATAC | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
8509 | 23500 | 9.577110 | CGTACTGTAGAAATTTGTCCTAATACA | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
8512 | 23503 | 9.614792 | ACTGTAGAAATTTGTCCTAATACATCC | 57.385 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
8513 | 23504 | 8.657074 | TGTAGAAATTTGTCCTAATACATCCG | 57.343 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
8514 | 23505 | 7.713507 | TGTAGAAATTTGTCCTAATACATCCGG | 59.286 | 37.037 | 0.00 | 0.00 | 0.00 | 5.14 |
8515 | 23506 | 6.895782 | AGAAATTTGTCCTAATACATCCGGA | 58.104 | 36.000 | 6.61 | 6.61 | 0.00 | 5.14 |
8516 | 23507 | 6.766467 | AGAAATTTGTCCTAATACATCCGGAC | 59.234 | 38.462 | 6.12 | 0.00 | 44.76 | 4.79 |
8517 | 23508 | 5.888982 | ATTTGTCCTAATACATCCGGACT | 57.111 | 39.130 | 6.12 | 0.00 | 44.79 | 3.85 |
8518 | 23509 | 6.989155 | ATTTGTCCTAATACATCCGGACTA | 57.011 | 37.500 | 6.12 | 0.00 | 44.79 | 2.59 |
8519 | 23510 | 5.779529 | TTGTCCTAATACATCCGGACTAC | 57.220 | 43.478 | 6.12 | 0.00 | 44.79 | 2.73 |
8520 | 23511 | 4.795469 | TGTCCTAATACATCCGGACTACA | 58.205 | 43.478 | 6.12 | 0.00 | 44.79 | 2.74 |
8521 | 23512 | 5.391256 | TGTCCTAATACATCCGGACTACAT | 58.609 | 41.667 | 6.12 | 0.00 | 44.79 | 2.29 |
8522 | 23513 | 5.836898 | TGTCCTAATACATCCGGACTACATT | 59.163 | 40.000 | 6.12 | 6.97 | 44.79 | 2.71 |
8523 | 23514 | 6.325545 | TGTCCTAATACATCCGGACTACATTT | 59.674 | 38.462 | 6.12 | 0.00 | 44.79 | 2.32 |
8524 | 23515 | 6.867293 | GTCCTAATACATCCGGACTACATTTC | 59.133 | 42.308 | 6.12 | 0.00 | 42.02 | 2.17 |
8525 | 23516 | 6.781014 | TCCTAATACATCCGGACTACATTTCT | 59.219 | 38.462 | 6.12 | 0.00 | 0.00 | 2.52 |
8526 | 23517 | 7.289317 | TCCTAATACATCCGGACTACATTTCTT | 59.711 | 37.037 | 6.12 | 0.00 | 0.00 | 2.52 |
8527 | 23518 | 7.599245 | CCTAATACATCCGGACTACATTTCTTC | 59.401 | 40.741 | 6.12 | 0.00 | 0.00 | 2.87 |
8528 | 23519 | 4.819105 | ACATCCGGACTACATTTCTTCA | 57.181 | 40.909 | 6.12 | 0.00 | 0.00 | 3.02 |
8529 | 23520 | 4.759782 | ACATCCGGACTACATTTCTTCAG | 58.240 | 43.478 | 6.12 | 0.00 | 0.00 | 3.02 |
8530 | 23521 | 4.466370 | ACATCCGGACTACATTTCTTCAGA | 59.534 | 41.667 | 6.12 | 0.00 | 0.00 | 3.27 |
8531 | 23522 | 5.046591 | ACATCCGGACTACATTTCTTCAGAA | 60.047 | 40.000 | 6.12 | 0.00 | 0.00 | 3.02 |
8532 | 23523 | 5.477607 | TCCGGACTACATTTCTTCAGAAA | 57.522 | 39.130 | 0.00 | 4.47 | 46.60 | 2.52 |
8551 | 23542 | 8.703604 | TCAGAAATAGTAATTCCTTGACTTCG | 57.296 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
8552 | 23543 | 8.528643 | TCAGAAATAGTAATTCCTTGACTTCGA | 58.471 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
8553 | 23544 | 8.596380 | CAGAAATAGTAATTCCTTGACTTCGAC | 58.404 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
8554 | 23545 | 8.532819 | AGAAATAGTAATTCCTTGACTTCGACT | 58.467 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
8555 | 23546 | 9.152595 | GAAATAGTAATTCCTTGACTTCGACTT | 57.847 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
8559 | 23550 | 8.480643 | AGTAATTCCTTGACTTCGACTTATTG | 57.519 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
8560 | 23551 | 8.311836 | AGTAATTCCTTGACTTCGACTTATTGA | 58.688 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
8561 | 23552 | 7.979444 | AATTCCTTGACTTCGACTTATTGAA | 57.021 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8562 | 23553 | 7.979444 | ATTCCTTGACTTCGACTTATTGAAA | 57.021 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8563 | 23554 | 7.795482 | TTCCTTGACTTCGACTTATTGAAAA | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
8564 | 23555 | 7.421530 | TCCTTGACTTCGACTTATTGAAAAG | 57.578 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
8565 | 23556 | 7.214381 | TCCTTGACTTCGACTTATTGAAAAGA | 58.786 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
8566 | 23557 | 7.170998 | TCCTTGACTTCGACTTATTGAAAAGAC | 59.829 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
8567 | 23558 | 7.042051 | CCTTGACTTCGACTTATTGAAAAGACA | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
8568 | 23559 | 7.173863 | TGACTTCGACTTATTGAAAAGACAC | 57.826 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8569 | 23560 | 6.202188 | TGACTTCGACTTATTGAAAAGACACC | 59.798 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
8570 | 23561 | 6.289064 | ACTTCGACTTATTGAAAAGACACCT | 58.711 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
8571 | 23562 | 7.439381 | ACTTCGACTTATTGAAAAGACACCTA | 58.561 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
8572 | 23563 | 7.384387 | ACTTCGACTTATTGAAAAGACACCTAC | 59.616 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
8573 | 23564 | 6.161381 | TCGACTTATTGAAAAGACACCTACC | 58.839 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
8574 | 23565 | 6.014840 | TCGACTTATTGAAAAGACACCTACCT | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 3.08 |
8575 | 23566 | 6.649557 | CGACTTATTGAAAAGACACCTACCTT | 59.350 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
8576 | 23567 | 7.172703 | CGACTTATTGAAAAGACACCTACCTTT | 59.827 | 37.037 | 0.00 | 0.00 | 34.39 | 3.11 |
8577 | 23568 | 9.498176 | GACTTATTGAAAAGACACCTACCTTTA | 57.502 | 33.333 | 0.00 | 0.00 | 32.81 | 1.85 |
8578 | 23569 | 9.281371 | ACTTATTGAAAAGACACCTACCTTTAC | 57.719 | 33.333 | 0.00 | 0.00 | 32.81 | 2.01 |
8579 | 23570 | 9.280174 | CTTATTGAAAAGACACCTACCTTTACA | 57.720 | 33.333 | 0.00 | 0.00 | 32.81 | 2.41 |
8580 | 23571 | 6.930667 | TTGAAAAGACACCTACCTTTACAC | 57.069 | 37.500 | 0.00 | 0.00 | 32.81 | 2.90 |
8581 | 23572 | 5.991861 | TGAAAAGACACCTACCTTTACACA | 58.008 | 37.500 | 0.00 | 0.00 | 32.81 | 3.72 |
8582 | 23573 | 6.597562 | TGAAAAGACACCTACCTTTACACAT | 58.402 | 36.000 | 0.00 | 0.00 | 32.81 | 3.21 |
8583 | 23574 | 6.485313 | TGAAAAGACACCTACCTTTACACATG | 59.515 | 38.462 | 0.00 | 0.00 | 32.81 | 3.21 |
8584 | 23575 | 4.553330 | AGACACCTACCTTTACACATGG | 57.447 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
8585 | 23576 | 3.908103 | AGACACCTACCTTTACACATGGT | 59.092 | 43.478 | 0.00 | 0.00 | 36.82 | 3.55 |
8586 | 23577 | 4.000988 | GACACCTACCTTTACACATGGTG | 58.999 | 47.826 | 0.00 | 0.00 | 46.11 | 4.17 |
8587 | 23578 | 2.747446 | CACCTACCTTTACACATGGTGC | 59.253 | 50.000 | 0.00 | 0.00 | 37.31 | 5.01 |
8588 | 23579 | 2.373836 | ACCTACCTTTACACATGGTGCA | 59.626 | 45.455 | 0.00 | 0.00 | 36.98 | 4.57 |
8589 | 23580 | 3.181438 | ACCTACCTTTACACATGGTGCAA | 60.181 | 43.478 | 0.00 | 0.00 | 36.98 | 4.08 |
8590 | 23581 | 3.823873 | CCTACCTTTACACATGGTGCAAA | 59.176 | 43.478 | 0.00 | 0.00 | 36.98 | 3.68 |
8591 | 23582 | 4.279671 | CCTACCTTTACACATGGTGCAAAA | 59.720 | 41.667 | 0.00 | 0.00 | 36.98 | 2.44 |
8592 | 23583 | 4.953940 | ACCTTTACACATGGTGCAAAAT | 57.046 | 36.364 | 0.00 | 0.00 | 36.98 | 1.82 |
8593 | 23584 | 5.289083 | ACCTTTACACATGGTGCAAAATT | 57.711 | 34.783 | 0.00 | 0.00 | 36.98 | 1.82 |
8594 | 23585 | 5.679601 | ACCTTTACACATGGTGCAAAATTT | 58.320 | 33.333 | 0.00 | 0.00 | 36.98 | 1.82 |
8595 | 23586 | 5.526846 | ACCTTTACACATGGTGCAAAATTTG | 59.473 | 36.000 | 0.57 | 0.57 | 36.98 | 2.32 |
8596 | 23587 | 5.049543 | CCTTTACACATGGTGCAAAATTTGG | 60.050 | 40.000 | 7.89 | 0.00 | 36.98 | 3.28 |
8597 | 23588 | 2.848691 | ACACATGGTGCAAAATTTGGG | 58.151 | 42.857 | 7.89 | 0.00 | 36.98 | 4.12 |
8598 | 23589 | 1.536331 | CACATGGTGCAAAATTTGGGC | 59.464 | 47.619 | 7.89 | 7.87 | 0.00 | 5.36 |
8599 | 23590 | 0.797542 | CATGGTGCAAAATTTGGGCG | 59.202 | 50.000 | 7.89 | 0.00 | 0.00 | 6.13 |
8600 | 23591 | 0.396060 | ATGGTGCAAAATTTGGGCGT | 59.604 | 45.000 | 7.89 | 0.00 | 0.00 | 5.68 |
8601 | 23592 | 1.040646 | TGGTGCAAAATTTGGGCGTA | 58.959 | 45.000 | 7.89 | 0.00 | 0.00 | 4.42 |
8602 | 23593 | 1.620819 | TGGTGCAAAATTTGGGCGTAT | 59.379 | 42.857 | 7.89 | 0.00 | 0.00 | 3.06 |
8603 | 23594 | 2.267426 | GGTGCAAAATTTGGGCGTATC | 58.733 | 47.619 | 7.89 | 0.00 | 0.00 | 2.24 |
8604 | 23595 | 2.353208 | GGTGCAAAATTTGGGCGTATCA | 60.353 | 45.455 | 7.89 | 0.00 | 0.00 | 2.15 |
8605 | 23596 | 3.321497 | GTGCAAAATTTGGGCGTATCAA | 58.679 | 40.909 | 7.89 | 0.00 | 0.00 | 2.57 |
8606 | 23597 | 3.743396 | GTGCAAAATTTGGGCGTATCAAA | 59.257 | 39.130 | 7.89 | 0.00 | 38.30 | 2.69 |
8607 | 23598 | 4.391523 | GTGCAAAATTTGGGCGTATCAAAT | 59.608 | 37.500 | 7.89 | 6.84 | 43.97 | 2.32 |
8608 | 23599 | 5.578727 | GTGCAAAATTTGGGCGTATCAAATA | 59.421 | 36.000 | 7.89 | 0.00 | 42.06 | 1.40 |
8609 | 23600 | 6.257630 | GTGCAAAATTTGGGCGTATCAAATAT | 59.742 | 34.615 | 7.89 | 4.20 | 42.06 | 1.28 |
8610 | 23601 | 6.257411 | TGCAAAATTTGGGCGTATCAAATATG | 59.743 | 34.615 | 7.89 | 12.88 | 42.06 | 1.78 |
8611 | 23602 | 6.292811 | GCAAAATTTGGGCGTATCAAATATGG | 60.293 | 38.462 | 7.89 | 6.78 | 42.06 | 2.74 |
8612 | 23603 | 6.478512 | AAATTTGGGCGTATCAAATATGGT | 57.521 | 33.333 | 11.14 | 0.00 | 42.06 | 3.55 |
8613 | 23604 | 7.589958 | AAATTTGGGCGTATCAAATATGGTA | 57.410 | 32.000 | 11.14 | 0.00 | 42.06 | 3.25 |
8614 | 23605 | 6.569179 | ATTTGGGCGTATCAAATATGGTAC | 57.431 | 37.500 | 9.72 | 0.00 | 41.38 | 3.34 |
8625 | 23616 | 7.969536 | ATCAAATATGGTACGATCAAGAAGG | 57.030 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
8626 | 23617 | 5.758296 | TCAAATATGGTACGATCAAGAAGGC | 59.242 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
8627 | 23618 | 2.225068 | ATGGTACGATCAAGAAGGCG | 57.775 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
8628 | 23619 | 0.892755 | TGGTACGATCAAGAAGGCGT | 59.107 | 50.000 | 0.00 | 0.00 | 40.42 | 5.68 |
8629 | 23620 | 1.135199 | TGGTACGATCAAGAAGGCGTC | 60.135 | 52.381 | 0.00 | 0.00 | 38.09 | 5.19 |
8630 | 23621 | 1.135199 | GGTACGATCAAGAAGGCGTCA | 60.135 | 52.381 | 2.69 | 0.00 | 38.09 | 4.35 |
8631 | 23622 | 1.918609 | GTACGATCAAGAAGGCGTCAC | 59.081 | 52.381 | 2.69 | 0.00 | 38.09 | 3.67 |
8632 | 23623 | 0.603569 | ACGATCAAGAAGGCGTCACT | 59.396 | 50.000 | 2.69 | 0.00 | 30.15 | 3.41 |
8633 | 23624 | 1.000955 | ACGATCAAGAAGGCGTCACTT | 59.999 | 47.619 | 2.69 | 0.00 | 30.15 | 3.16 |
8634 | 23625 | 2.069273 | CGATCAAGAAGGCGTCACTTT | 58.931 | 47.619 | 2.69 | 0.00 | 0.00 | 2.66 |
8635 | 23626 | 2.159787 | CGATCAAGAAGGCGTCACTTTG | 60.160 | 50.000 | 2.69 | 0.00 | 0.00 | 2.77 |
8636 | 23627 | 0.944386 | TCAAGAAGGCGTCACTTTGC | 59.056 | 50.000 | 2.69 | 0.00 | 0.00 | 3.68 |
8637 | 23628 | 0.662619 | CAAGAAGGCGTCACTTTGCA | 59.337 | 50.000 | 2.69 | 0.00 | 0.00 | 4.08 |
8638 | 23629 | 1.267806 | CAAGAAGGCGTCACTTTGCAT | 59.732 | 47.619 | 2.69 | 0.00 | 0.00 | 3.96 |
8639 | 23630 | 1.160137 | AGAAGGCGTCACTTTGCATC | 58.840 | 50.000 | 2.69 | 0.00 | 0.00 | 3.91 |
8640 | 23631 | 1.160137 | GAAGGCGTCACTTTGCATCT | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8641 | 23632 | 1.537202 | GAAGGCGTCACTTTGCATCTT | 59.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
8642 | 23633 | 0.877071 | AGGCGTCACTTTGCATCTTG | 59.123 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
8643 | 23634 | 0.593128 | GGCGTCACTTTGCATCTTGT | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
8644 | 23635 | 1.001378 | GGCGTCACTTTGCATCTTGTT | 60.001 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
8645 | 23636 | 2.046313 | GCGTCACTTTGCATCTTGTTG | 58.954 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
8646 | 23637 | 2.541588 | GCGTCACTTTGCATCTTGTTGT | 60.542 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
8647 | 23638 | 3.038017 | CGTCACTTTGCATCTTGTTGTG | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
8648 | 23639 | 2.791004 | GTCACTTTGCATCTTGTTGTGC | 59.209 | 45.455 | 0.00 | 0.00 | 41.61 | 4.57 |
8649 | 23640 | 1.782569 | CACTTTGCATCTTGTTGTGCG | 59.217 | 47.619 | 0.00 | 0.00 | 44.11 | 5.34 |
8650 | 23641 | 1.405105 | ACTTTGCATCTTGTTGTGCGT | 59.595 | 42.857 | 0.00 | 0.00 | 44.11 | 5.24 |
8651 | 23642 | 2.616376 | ACTTTGCATCTTGTTGTGCGTA | 59.384 | 40.909 | 0.00 | 0.00 | 44.11 | 4.42 |
8652 | 23643 | 3.253188 | ACTTTGCATCTTGTTGTGCGTAT | 59.747 | 39.130 | 0.00 | 0.00 | 44.11 | 3.06 |
8653 | 23644 | 3.913548 | TTGCATCTTGTTGTGCGTATT | 57.086 | 38.095 | 0.00 | 0.00 | 44.11 | 1.89 |
8654 | 23645 | 3.913548 | TGCATCTTGTTGTGCGTATTT | 57.086 | 38.095 | 0.00 | 0.00 | 44.11 | 1.40 |
8655 | 23646 | 4.235939 | TGCATCTTGTTGTGCGTATTTT | 57.764 | 36.364 | 0.00 | 0.00 | 44.11 | 1.82 |
8656 | 23647 | 4.225984 | TGCATCTTGTTGTGCGTATTTTC | 58.774 | 39.130 | 0.00 | 0.00 | 44.11 | 2.29 |
8657 | 23648 | 3.608073 | GCATCTTGTTGTGCGTATTTTCC | 59.392 | 43.478 | 0.00 | 0.00 | 0.00 | 3.13 |
8658 | 23649 | 3.529634 | TCTTGTTGTGCGTATTTTCCG | 57.470 | 42.857 | 0.00 | 0.00 | 0.00 | 4.30 |
8659 | 23650 | 3.132160 | TCTTGTTGTGCGTATTTTCCGA | 58.868 | 40.909 | 0.00 | 0.00 | 0.00 | 4.55 |
8660 | 23651 | 3.560481 | TCTTGTTGTGCGTATTTTCCGAA | 59.440 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
8661 | 23652 | 4.214545 | TCTTGTTGTGCGTATTTTCCGAAT | 59.785 | 37.500 | 0.00 | 0.00 | 0.00 | 3.34 |
8662 | 23653 | 4.073169 | TGTTGTGCGTATTTTCCGAATC | 57.927 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
8663 | 23654 | 3.120130 | TGTTGTGCGTATTTTCCGAATCC | 60.120 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
8664 | 23655 | 2.980568 | TGTGCGTATTTTCCGAATCCT | 58.019 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
8665 | 23656 | 3.340034 | TGTGCGTATTTTCCGAATCCTT | 58.660 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
8666 | 23657 | 3.372822 | TGTGCGTATTTTCCGAATCCTTC | 59.627 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
8707 | 23698 | 8.894768 | ACAATTTACACTCTCTTATAGGATGC | 57.105 | 34.615 | 0.00 | 0.00 | 0.00 | 3.91 |
8708 | 23699 | 8.709308 | ACAATTTACACTCTCTTATAGGATGCT | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
8709 | 23700 | 9.553064 | CAATTTACACTCTCTTATAGGATGCTT | 57.447 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
8877 | 23868 | 2.959465 | GCAAGTGCTAATAGGGGGAT | 57.041 | 50.000 | 0.00 | 0.00 | 38.21 | 3.85 |
8882 | 23873 | 5.388654 | CAAGTGCTAATAGGGGGATTCAAT | 58.611 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
8933 | 23924 | 1.402896 | CCCGGCTGAGCTAATCCTGA | 61.403 | 60.000 | 3.72 | 0.00 | 0.00 | 3.86 |
9001 | 23992 | 1.338973 | TGTCGCCCGGTATTATCAGTC | 59.661 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
9135 | 24126 | 1.282157 | AGATAGCTGGTTGTGGTTCCC | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
33 | 35 | 9.700831 | AATTACTCTAATGCAAATAGGTTTCCT | 57.299 | 29.630 | 9.32 | 0.00 | 37.71 | 3.36 |
56 | 58 | 9.839817 | GAGAAGAACCCTAGCTAAATTAGAATT | 57.160 | 33.333 | 3.88 | 0.00 | 0.00 | 2.17 |
57 | 59 | 9.219715 | AGAGAAGAACCCTAGCTAAATTAGAAT | 57.780 | 33.333 | 3.88 | 0.00 | 0.00 | 2.40 |
58 | 60 | 8.611051 | AGAGAAGAACCCTAGCTAAATTAGAA | 57.389 | 34.615 | 3.88 | 0.00 | 0.00 | 2.10 |
59 | 61 | 8.062536 | AGAGAGAAGAACCCTAGCTAAATTAGA | 58.937 | 37.037 | 3.88 | 0.00 | 0.00 | 2.10 |
60 | 62 | 8.245195 | AGAGAGAAGAACCCTAGCTAAATTAG | 57.755 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
89 | 91 | 3.562635 | GTGGTTTTCGCGAGAGGG | 58.437 | 61.111 | 9.59 | 0.00 | 43.69 | 4.30 |
119 | 133 | 3.521937 | AGTAGATGAATTTGGACCGGGAA | 59.478 | 43.478 | 6.32 | 0.00 | 0.00 | 3.97 |
165 | 179 | 6.011628 | TCACTGGGAAAAGGAAGGAATATTCT | 60.012 | 38.462 | 14.95 | 0.00 | 0.00 | 2.40 |
288 | 312 | 7.545489 | AGATTAACCTGTAGGACTAAGAAACG | 58.455 | 38.462 | 4.64 | 0.00 | 38.94 | 3.60 |
324 | 349 | 4.202202 | CCCCAAATCAAACAAGCAAGTGTA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
326 | 351 | 3.132925 | CCCCAAATCAAACAAGCAAGTG | 58.867 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
508 | 544 | 5.407084 | TCTTGTACATGTGTTACCGTTCATG | 59.593 | 40.000 | 9.11 | 0.00 | 42.00 | 3.07 |
522 | 558 | 6.865726 | GGCAGAGTATATCAGTCTTGTACATG | 59.134 | 42.308 | 0.00 | 0.00 | 34.49 | 3.21 |
523 | 559 | 6.294231 | CGGCAGAGTATATCAGTCTTGTACAT | 60.294 | 42.308 | 0.00 | 0.00 | 34.49 | 2.29 |
526 | 562 | 4.023107 | GCGGCAGAGTATATCAGTCTTGTA | 60.023 | 45.833 | 0.00 | 0.00 | 34.49 | 2.41 |
528 | 564 | 3.312828 | GCGGCAGAGTATATCAGTCTTG | 58.687 | 50.000 | 0.00 | 0.00 | 34.49 | 3.02 |
529 | 565 | 2.297597 | GGCGGCAGAGTATATCAGTCTT | 59.702 | 50.000 | 3.07 | 0.00 | 34.49 | 3.01 |
531 | 567 | 1.889829 | AGGCGGCAGAGTATATCAGTC | 59.110 | 52.381 | 13.08 | 0.00 | 0.00 | 3.51 |
532 | 568 | 1.615883 | CAGGCGGCAGAGTATATCAGT | 59.384 | 52.381 | 13.08 | 0.00 | 0.00 | 3.41 |
534 | 570 | 0.318441 | GCAGGCGGCAGAGTATATCA | 59.682 | 55.000 | 13.08 | 0.00 | 43.97 | 2.15 |
535 | 571 | 3.129792 | GCAGGCGGCAGAGTATATC | 57.870 | 57.895 | 13.08 | 0.00 | 43.97 | 1.63 |
573 | 609 | 3.064545 | GGCTGCAAGAAGATGTCATGTAC | 59.935 | 47.826 | 0.50 | 0.00 | 34.07 | 2.90 |
574 | 610 | 3.054875 | AGGCTGCAAGAAGATGTCATGTA | 60.055 | 43.478 | 0.50 | 0.00 | 34.07 | 2.29 |
576 | 612 | 2.366533 | AGGCTGCAAGAAGATGTCATG | 58.633 | 47.619 | 0.50 | 0.00 | 34.07 | 3.07 |
579 | 615 | 3.258971 | ACTAGGCTGCAAGAAGATGTC | 57.741 | 47.619 | 0.50 | 0.00 | 34.07 | 3.06 |
644 | 696 | 6.183360 | GGTGGAACAATCTTAACACACTCAAA | 60.183 | 38.462 | 0.00 | 0.00 | 44.16 | 2.69 |
680 | 732 | 2.982130 | GGTGGTGAGGAGATGCGT | 59.018 | 61.111 | 0.00 | 0.00 | 0.00 | 5.24 |
695 | 747 | 7.437267 | CGGTTCTAAATACAATACATCTTCGGT | 59.563 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
728 | 781 | 0.603065 | GAGCACCCCCATCACAAAAC | 59.397 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
760 | 813 | 4.934602 | AGAGAAGCTTTGTCTGATTGCTAC | 59.065 | 41.667 | 10.63 | 0.00 | 31.28 | 3.58 |
809 | 862 | 8.729805 | AAAGAATGCAAAACAAAGACCATAAA | 57.270 | 26.923 | 0.00 | 0.00 | 0.00 | 1.40 |
810 | 863 | 9.995003 | ATAAAGAATGCAAAACAAAGACCATAA | 57.005 | 25.926 | 0.00 | 0.00 | 0.00 | 1.90 |
853 | 907 | 3.708631 | ACTAGCAGATAAGACAGTGCCAT | 59.291 | 43.478 | 0.00 | 0.00 | 36.54 | 4.40 |
873 | 927 | 1.671261 | CGCACTCTGAAAGCAGCTACT | 60.671 | 52.381 | 0.00 | 0.00 | 42.01 | 2.57 |
874 | 928 | 0.718343 | CGCACTCTGAAAGCAGCTAC | 59.282 | 55.000 | 0.00 | 0.00 | 42.01 | 3.58 |
875 | 929 | 0.318441 | ACGCACTCTGAAAGCAGCTA | 59.682 | 50.000 | 0.00 | 0.00 | 42.01 | 3.32 |
968 | 1022 | 5.126545 | AGAGAGAGAGATGATCATAGCATGC | 59.873 | 44.000 | 10.51 | 10.51 | 0.00 | 4.06 |
972 | 1026 | 6.413052 | AGAGAGAGAGAGAGATGATCATAGC | 58.587 | 44.000 | 8.54 | 3.64 | 0.00 | 2.97 |
1000 | 1054 | 4.081586 | CGGTGAGAGGATCATCATCATCAT | 60.082 | 45.833 | 10.44 | 0.00 | 41.50 | 2.45 |
1001 | 1055 | 3.257624 | CGGTGAGAGGATCATCATCATCA | 59.742 | 47.826 | 10.44 | 1.52 | 41.50 | 3.07 |
1002 | 1056 | 3.847542 | CGGTGAGAGGATCATCATCATC | 58.152 | 50.000 | 10.44 | 9.51 | 39.18 | 2.92 |
1049 | 1106 | 4.538490 | AGAGAAGAGTAGAGAGGAAGACCA | 59.462 | 45.833 | 0.00 | 0.00 | 38.94 | 4.02 |
1170 | 1227 | 2.434336 | CCTCATCTCCGGTATGTTTCCA | 59.566 | 50.000 | 15.88 | 0.55 | 0.00 | 3.53 |
1212 | 1269 | 1.274712 | CTCCCTCTTCTTGAGCAGGT | 58.725 | 55.000 | 0.00 | 0.00 | 41.35 | 4.00 |
1217 | 1274 | 0.540923 | CCCTGCTCCCTCTTCTTGAG | 59.459 | 60.000 | 0.00 | 0.00 | 42.30 | 3.02 |
1242 | 1299 | 5.525012 | CACATAATTTGAGGAGAAGCGATCA | 59.475 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1481 | 1539 | 1.311059 | GCATTCCCCATGAACCCCT | 59.689 | 57.895 | 0.00 | 0.00 | 35.31 | 4.79 |
1542 | 1601 | 4.620332 | GCATCTAGCACCATCTACTCATCC | 60.620 | 50.000 | 0.00 | 0.00 | 44.79 | 3.51 |
1651 | 1711 | 7.559590 | AAGTGAAGATTAGTCAACATATGGC | 57.440 | 36.000 | 7.80 | 0.00 | 0.00 | 4.40 |
1917 | 1987 | 2.915349 | CTCCTTCACCATGTCAGGATG | 58.085 | 52.381 | 0.00 | 0.00 | 34.82 | 3.51 |
1961 | 2031 | 3.274288 | CAAGTAGCTAGGCTTTCCAAGG | 58.726 | 50.000 | 0.00 | 0.00 | 40.44 | 3.61 |
2209 | 2372 | 9.326413 | GTTTAGTCTAATGGTGCATGTAGTAAT | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2660 | 2823 | 5.336451 | GGAAAATTCGTGCTACTTCCCAAAT | 60.336 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2669 | 2832 | 7.027161 | ACATGTTATTGGAAAATTCGTGCTAC | 58.973 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
2696 | 2859 | 6.980593 | TGACCGTTGTTAGCTTAAGTACTTA | 58.019 | 36.000 | 11.38 | 11.38 | 0.00 | 2.24 |
2740 | 2903 | 2.225491 | TGGCGGAAACTTTCTGAATTCG | 59.775 | 45.455 | 13.66 | 3.47 | 38.34 | 3.34 |
2777 | 2940 | 7.640313 | AGGACATATATATCGAAGTGACCCTA | 58.360 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
2850 | 3013 | 7.024768 | GCATGAAAATTGTAAAGCATTGCATT | 58.975 | 30.769 | 11.91 | 7.94 | 30.96 | 3.56 |
2977 | 3145 | 0.318441 | ACAGTCCATCGGTGACACTG | 59.682 | 55.000 | 20.28 | 20.28 | 39.79 | 3.66 |
2986 | 3154 | 3.619038 | GGCTAGAAAAGAACAGTCCATCG | 59.381 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
2989 | 3157 | 3.391296 | AGTGGCTAGAAAAGAACAGTCCA | 59.609 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
2998 | 3166 | 4.894784 | TGTTGGAGTAGTGGCTAGAAAAG | 58.105 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
3493 | 3669 | 1.271379 | CCCGAGTTGTCAAGGACCATT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
3494 | 3670 | 0.324943 | CCCGAGTTGTCAAGGACCAT | 59.675 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
3682 | 3858 | 2.186644 | CATCGTCCGCCATGACCA | 59.813 | 61.111 | 0.00 | 0.00 | 31.35 | 4.02 |
3766 | 3942 | 4.735358 | GGGTTTCCCCCGGAGCAC | 62.735 | 72.222 | 0.73 | 0.00 | 45.80 | 4.40 |
3794 | 3970 | 0.686441 | TCATCGTCCAATCCGGGAGT | 60.686 | 55.000 | 0.00 | 0.00 | 37.71 | 3.85 |
3804 | 3980 | 0.249120 | AAGAACGCCATCATCGTCCA | 59.751 | 50.000 | 0.00 | 0.00 | 39.48 | 4.02 |
3840 | 4016 | 0.826062 | CTCCAAAATGATGCCCCCAC | 59.174 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3870 | 4047 | 1.333636 | CCTCCTCTTGTCGCCTCCAT | 61.334 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3877 | 4054 | 0.108898 | CACTGCTCCTCCTCTTGTCG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3943 | 4120 | 5.524284 | GCACATCAGACGACTAATCTACAT | 58.476 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
3946 | 4123 | 3.875134 | TCGCACATCAGACGACTAATCTA | 59.125 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
3954 | 4131 | 1.536709 | CCATCATCGCACATCAGACGA | 60.537 | 52.381 | 0.00 | 0.00 | 40.53 | 4.20 |
3976 | 4153 | 3.807538 | GTCGACCTCCTGCGCGTA | 61.808 | 66.667 | 8.43 | 0.71 | 0.00 | 4.42 |
4084 | 4266 | 2.124736 | GGTATGAGGCAGCCGCAA | 60.125 | 61.111 | 22.91 | 8.83 | 36.81 | 4.85 |
4210 | 4392 | 5.610982 | TGATAGTCTGGGCCTAATACCAAAT | 59.389 | 40.000 | 4.53 | 0.00 | 36.09 | 2.32 |
4249 | 4431 | 4.251103 | TCTGTTGCTACTCCTATCCAGA | 57.749 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
4265 | 4447 | 3.067106 | CACCGTCTAAGCAACATCTGTT | 58.933 | 45.455 | 0.00 | 0.00 | 39.12 | 3.16 |
4526 | 4711 | 1.009829 | CCGTGCTTCTTGGCTATGTC | 58.990 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4615 | 4800 | 1.344438 | TCAGGTGTGCACGAAGAGAAT | 59.656 | 47.619 | 13.13 | 0.00 | 0.00 | 2.40 |
4633 | 4818 | 3.056821 | AGTTGTCGACGATGAAATCCTCA | 60.057 | 43.478 | 9.14 | 0.00 | 41.39 | 3.86 |
4758 | 4943 | 1.525619 | GACAAACGTCAAGGACTTCCG | 59.474 | 52.381 | 0.00 | 0.00 | 35.78 | 4.30 |
4810 | 4995 | 7.237871 | TGATCATACGTACCGTTTTCAATTTG | 58.762 | 34.615 | 0.00 | 0.00 | 41.54 | 2.32 |
4813 | 4998 | 6.456449 | GCTTGATCATACGTACCGTTTTCAAT | 60.456 | 38.462 | 0.00 | 0.00 | 41.54 | 2.57 |
4864 | 5049 | 1.959226 | GCCAAGGAGTCGTTTCGCA | 60.959 | 57.895 | 8.73 | 0.00 | 0.00 | 5.10 |
5633 | 5866 | 2.180204 | GCTGTGGTGTCACGTGCTT | 61.180 | 57.895 | 11.67 | 0.00 | 46.42 | 3.91 |
5730 | 13027 | 2.111043 | AGGGTGGCAGTGTTGTCG | 59.889 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
5949 | 13709 | 4.157958 | GCTACCGCGACGACGTCT | 62.158 | 66.667 | 24.36 | 9.36 | 41.98 | 4.18 |
6087 | 14967 | 2.982130 | CGCTAAGACAGGGTGGCT | 59.018 | 61.111 | 0.00 | 0.00 | 37.28 | 4.75 |
6094 | 14974 | 3.846896 | CGACTCACTTTACGCTAAGACAG | 59.153 | 47.826 | 4.32 | 2.60 | 0.00 | 3.51 |
6108 | 14988 | 1.579084 | GACGTCTGCCTCGACTCACT | 61.579 | 60.000 | 8.70 | 0.00 | 0.00 | 3.41 |
6110 | 14990 | 0.960861 | ATGACGTCTGCCTCGACTCA | 60.961 | 55.000 | 17.92 | 0.00 | 0.00 | 3.41 |
6121 | 15001 | 2.478890 | CCCTACCGCGATGACGTCT | 61.479 | 63.158 | 17.92 | 1.84 | 41.98 | 4.18 |
6128 | 15008 | 2.561956 | CCATCGTCCCTACCGCGAT | 61.562 | 63.158 | 8.23 | 0.00 | 44.77 | 4.58 |
6131 | 15011 | 2.416260 | GTCCATCGTCCCTACCGC | 59.584 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
6138 | 15018 | 3.515286 | TCTCGGCGTCCATCGTCC | 61.515 | 66.667 | 6.85 | 0.00 | 41.52 | 4.79 |
6173 | 15053 | 2.662596 | CGCTAAGACAGGGTGGCA | 59.337 | 61.111 | 0.00 | 0.00 | 32.61 | 4.92 |
7015 | 15895 | 7.506114 | TCTATCATTTTGCGTAACCCTAAGAT | 58.494 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
7016 | 15896 | 6.880484 | TCTATCATTTTGCGTAACCCTAAGA | 58.120 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
7017 | 15897 | 7.548196 | TTCTATCATTTTGCGTAACCCTAAG | 57.452 | 36.000 | 0.00 | 0.00 | 0.00 | 2.18 |
7018 | 15898 | 7.608761 | ACTTTCTATCATTTTGCGTAACCCTAA | 59.391 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
7019 | 15899 | 7.065324 | CACTTTCTATCATTTTGCGTAACCCTA | 59.935 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
7020 | 15900 | 5.944007 | ACTTTCTATCATTTTGCGTAACCCT | 59.056 | 36.000 | 0.00 | 0.00 | 0.00 | 4.34 |
7021 | 15901 | 6.027749 | CACTTTCTATCATTTTGCGTAACCC | 58.972 | 40.000 | 0.00 | 0.00 | 0.00 | 4.11 |
7022 | 15902 | 6.741358 | GTCACTTTCTATCATTTTGCGTAACC | 59.259 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
7023 | 15903 | 7.295201 | TGTCACTTTCTATCATTTTGCGTAAC | 58.705 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
7024 | 15904 | 7.386573 | TCTGTCACTTTCTATCATTTTGCGTAA | 59.613 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
7025 | 15905 | 6.871492 | TCTGTCACTTTCTATCATTTTGCGTA | 59.129 | 34.615 | 0.00 | 0.00 | 0.00 | 4.42 |
7026 | 15906 | 5.700832 | TCTGTCACTTTCTATCATTTTGCGT | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 5.24 |
7027 | 15907 | 6.169419 | TCTGTCACTTTCTATCATTTTGCG | 57.831 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
7028 | 15908 | 6.521133 | CGTTCTGTCACTTTCTATCATTTTGC | 59.479 | 38.462 | 0.00 | 0.00 | 0.00 | 3.68 |
7036 | 16176 | 7.730364 | AACATTTCGTTCTGTCACTTTCTAT | 57.270 | 32.000 | 0.00 | 0.00 | 29.27 | 1.98 |
7039 | 16179 | 7.061789 | ACAAAAACATTTCGTTCTGTCACTTTC | 59.938 | 33.333 | 0.00 | 0.00 | 36.59 | 2.62 |
7041 | 16181 | 6.386654 | ACAAAAACATTTCGTTCTGTCACTT | 58.613 | 32.000 | 0.00 | 0.00 | 36.59 | 3.16 |
7044 | 16184 | 7.644986 | AAAACAAAAACATTTCGTTCTGTCA | 57.355 | 28.000 | 0.00 | 0.00 | 36.59 | 3.58 |
7715 | 22698 | 8.877808 | TCAGATCAAACATGCTAGTAGTATTG | 57.122 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
7735 | 22718 | 6.593770 | TCAGCAATACATACGTTTGTTCAGAT | 59.406 | 34.615 | 16.79 | 1.89 | 0.00 | 2.90 |
7747 | 22730 | 7.201617 | GGAGGTTTGTTACTCAGCAATACATAC | 60.202 | 40.741 | 0.00 | 0.00 | 35.45 | 2.39 |
7750 | 22733 | 5.001232 | GGAGGTTTGTTACTCAGCAATACA | 58.999 | 41.667 | 0.00 | 0.00 | 35.45 | 2.29 |
7751 | 22734 | 4.092968 | CGGAGGTTTGTTACTCAGCAATAC | 59.907 | 45.833 | 0.00 | 0.00 | 35.45 | 1.89 |
7766 | 22749 | 5.671493 | CATTCAGGTAGTTATCGGAGGTTT | 58.329 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
7773 | 22757 | 7.761704 | AGCTAATATGCATTCAGGTAGTTATCG | 59.238 | 37.037 | 3.54 | 0.00 | 34.99 | 2.92 |
7783 | 22769 | 6.292168 | GCAAGCAAAAGCTAATATGCATTCAG | 60.292 | 38.462 | 3.54 | 0.70 | 41.18 | 3.02 |
7843 | 22830 | 5.121768 | CGTTAGCTGTAGTAAAACCATGCTT | 59.878 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
7845 | 22832 | 4.628333 | TCGTTAGCTGTAGTAAAACCATGC | 59.372 | 41.667 | 0.00 | 0.00 | 0.00 | 4.06 |
7846 | 22833 | 6.238103 | CCATCGTTAGCTGTAGTAAAACCATG | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 3.66 |
7852 | 22839 | 5.648178 | TCACCATCGTTAGCTGTAGTAAA | 57.352 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
7854 | 22841 | 4.277672 | GGATCACCATCGTTAGCTGTAGTA | 59.722 | 45.833 | 0.00 | 0.00 | 35.97 | 1.82 |
7855 | 22842 | 3.068307 | GGATCACCATCGTTAGCTGTAGT | 59.932 | 47.826 | 0.00 | 0.00 | 35.97 | 2.73 |
7856 | 22843 | 3.068165 | TGGATCACCATCGTTAGCTGTAG | 59.932 | 47.826 | 0.00 | 0.00 | 41.77 | 2.74 |
7931 | 22918 | 1.376037 | CGCCAAGGTTCAGGTCCTC | 60.376 | 63.158 | 0.00 | 0.00 | 33.76 | 3.71 |
7975 | 22962 | 3.494924 | CCAGCATGATCGAAACCCTGATA | 60.495 | 47.826 | 0.00 | 0.00 | 39.69 | 2.15 |
7984 | 22971 | 0.462581 | GGTGAGCCAGCATGATCGAA | 60.463 | 55.000 | 0.00 | 0.00 | 39.69 | 3.71 |
8032 | 23019 | 2.552155 | CCTTCCCGGATCAAACTTGTCA | 60.552 | 50.000 | 0.73 | 0.00 | 33.16 | 3.58 |
8283 | 23270 | 4.739046 | GATGAACGGACCATCATTCATC | 57.261 | 45.455 | 16.13 | 16.13 | 45.95 | 2.92 |
8381 | 23369 | 9.961265 | TCATGCACAGTAGTATAACATACTAAC | 57.039 | 33.333 | 7.45 | 3.84 | 32.49 | 2.34 |
8384 | 23372 | 8.465273 | TCTCATGCACAGTAGTATAACATACT | 57.535 | 34.615 | 0.00 | 4.39 | 32.44 | 2.12 |
8385 | 23373 | 8.353684 | ACTCTCATGCACAGTAGTATAACATAC | 58.646 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
8386 | 23374 | 8.465273 | ACTCTCATGCACAGTAGTATAACATA | 57.535 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
8387 | 23375 | 7.353414 | ACTCTCATGCACAGTAGTATAACAT | 57.647 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
8388 | 23376 | 6.775594 | ACTCTCATGCACAGTAGTATAACA | 57.224 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
8389 | 23377 | 8.188799 | TGTTACTCTCATGCACAGTAGTATAAC | 58.811 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
8390 | 23378 | 8.288689 | TGTTACTCTCATGCACAGTAGTATAA | 57.711 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
8394 | 23382 | 5.468540 | TTGTTACTCTCATGCACAGTAGT | 57.531 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
8397 | 23388 | 5.555017 | AGAATTGTTACTCTCATGCACAGT | 58.445 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
8428 | 23419 | 4.546570 | AGCCAGATAAAACGAAAAAGTGC | 58.453 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
8429 | 23420 | 6.438763 | AGAAGCCAGATAAAACGAAAAAGTG | 58.561 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
8430 | 23421 | 6.635030 | AGAAGCCAGATAAAACGAAAAAGT | 57.365 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
8431 | 23422 | 6.303259 | CGAAGAAGCCAGATAAAACGAAAAAG | 59.697 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
8432 | 23423 | 6.140110 | CGAAGAAGCCAGATAAAACGAAAAA | 58.860 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
8433 | 23424 | 5.334569 | CCGAAGAAGCCAGATAAAACGAAAA | 60.335 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
8434 | 23425 | 4.153475 | CCGAAGAAGCCAGATAAAACGAAA | 59.847 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
8435 | 23426 | 3.682858 | CCGAAGAAGCCAGATAAAACGAA | 59.317 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
8436 | 23427 | 3.259064 | CCGAAGAAGCCAGATAAAACGA | 58.741 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
8437 | 23428 | 3.000727 | ACCGAAGAAGCCAGATAAAACG | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 3.60 |
8438 | 23429 | 4.000988 | TGACCGAAGAAGCCAGATAAAAC | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
8439 | 23430 | 4.280436 | TGACCGAAGAAGCCAGATAAAA | 57.720 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
8440 | 23431 | 3.973206 | TGACCGAAGAAGCCAGATAAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
8441 | 23432 | 3.973206 | TTGACCGAAGAAGCCAGATAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
8442 | 23433 | 3.973206 | TTTGACCGAAGAAGCCAGATA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 1.98 |
8443 | 23434 | 2.859165 | TTTGACCGAAGAAGCCAGAT | 57.141 | 45.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8444 | 23435 | 2.038426 | TCATTTGACCGAAGAAGCCAGA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
8445 | 23436 | 2.426522 | TCATTTGACCGAAGAAGCCAG | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
8446 | 23437 | 2.559698 | TCATTTGACCGAAGAAGCCA | 57.440 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
8447 | 23438 | 2.356069 | GGATCATTTGACCGAAGAAGCC | 59.644 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
8448 | 23439 | 3.274288 | AGGATCATTTGACCGAAGAAGC | 58.726 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
8449 | 23440 | 6.203723 | GGATTAGGATCATTTGACCGAAGAAG | 59.796 | 42.308 | 0.00 | 0.00 | 33.77 | 2.85 |
8450 | 23441 | 6.055588 | GGATTAGGATCATTTGACCGAAGAA | 58.944 | 40.000 | 0.00 | 0.00 | 33.77 | 2.52 |
8451 | 23442 | 5.366768 | AGGATTAGGATCATTTGACCGAAGA | 59.633 | 40.000 | 0.00 | 0.00 | 33.77 | 2.87 |
8452 | 23443 | 5.615289 | AGGATTAGGATCATTTGACCGAAG | 58.385 | 41.667 | 0.00 | 0.00 | 33.77 | 3.79 |
8453 | 23444 | 5.630415 | AGGATTAGGATCATTTGACCGAA | 57.370 | 39.130 | 0.00 | 0.00 | 33.77 | 4.30 |
8454 | 23445 | 5.130311 | TGAAGGATTAGGATCATTTGACCGA | 59.870 | 40.000 | 0.00 | 0.00 | 36.49 | 4.69 |
8455 | 23446 | 5.368145 | TGAAGGATTAGGATCATTTGACCG | 58.632 | 41.667 | 0.00 | 0.00 | 36.49 | 4.79 |
8456 | 23447 | 6.830838 | AGTTGAAGGATTAGGATCATTTGACC | 59.169 | 38.462 | 0.00 | 0.00 | 36.49 | 4.02 |
8457 | 23448 | 7.872113 | AGTTGAAGGATTAGGATCATTTGAC | 57.128 | 36.000 | 0.00 | 0.00 | 36.49 | 3.18 |
8458 | 23449 | 7.280876 | CGAAGTTGAAGGATTAGGATCATTTGA | 59.719 | 37.037 | 0.00 | 0.00 | 36.49 | 2.69 |
8459 | 23450 | 7.066284 | ACGAAGTTGAAGGATTAGGATCATTTG | 59.934 | 37.037 | 0.00 | 0.00 | 37.78 | 2.32 |
8460 | 23451 | 7.112779 | ACGAAGTTGAAGGATTAGGATCATTT | 58.887 | 34.615 | 0.00 | 0.00 | 37.78 | 2.32 |
8461 | 23452 | 6.653989 | ACGAAGTTGAAGGATTAGGATCATT | 58.346 | 36.000 | 0.00 | 0.00 | 37.78 | 2.57 |
8462 | 23453 | 6.240549 | ACGAAGTTGAAGGATTAGGATCAT | 57.759 | 37.500 | 0.00 | 0.00 | 37.78 | 2.45 |
8463 | 23454 | 5.677319 | ACGAAGTTGAAGGATTAGGATCA | 57.323 | 39.130 | 0.00 | 0.00 | 37.78 | 2.92 |
8464 | 23455 | 6.697892 | CAGTACGAAGTTGAAGGATTAGGATC | 59.302 | 42.308 | 0.00 | 0.00 | 37.78 | 3.36 |
8465 | 23456 | 6.154706 | ACAGTACGAAGTTGAAGGATTAGGAT | 59.845 | 38.462 | 0.00 | 0.00 | 37.78 | 3.24 |
8466 | 23457 | 5.479375 | ACAGTACGAAGTTGAAGGATTAGGA | 59.521 | 40.000 | 0.00 | 0.00 | 37.78 | 2.94 |
8467 | 23458 | 5.721232 | ACAGTACGAAGTTGAAGGATTAGG | 58.279 | 41.667 | 0.00 | 0.00 | 37.78 | 2.69 |
8468 | 23459 | 7.759465 | TCTACAGTACGAAGTTGAAGGATTAG | 58.241 | 38.462 | 0.00 | 0.00 | 37.78 | 1.73 |
8469 | 23460 | 7.692460 | TCTACAGTACGAAGTTGAAGGATTA | 57.308 | 36.000 | 0.00 | 0.00 | 37.78 | 1.75 |
8470 | 23461 | 6.585695 | TCTACAGTACGAAGTTGAAGGATT | 57.414 | 37.500 | 0.00 | 0.00 | 37.78 | 3.01 |
8471 | 23462 | 6.585695 | TTCTACAGTACGAAGTTGAAGGAT | 57.414 | 37.500 | 0.00 | 0.00 | 37.78 | 3.24 |
8472 | 23463 | 6.395426 | TTTCTACAGTACGAAGTTGAAGGA | 57.605 | 37.500 | 0.00 | 0.23 | 37.78 | 3.36 |
8473 | 23464 | 7.653767 | AATTTCTACAGTACGAAGTTGAAGG | 57.346 | 36.000 | 0.00 | 0.00 | 37.78 | 3.46 |
8474 | 23465 | 8.548721 | ACAAATTTCTACAGTACGAAGTTGAAG | 58.451 | 33.333 | 13.97 | 6.32 | 37.78 | 3.02 |
8475 | 23466 | 8.428186 | ACAAATTTCTACAGTACGAAGTTGAA | 57.572 | 30.769 | 13.97 | 8.17 | 37.78 | 2.69 |
8476 | 23467 | 7.170320 | GGACAAATTTCTACAGTACGAAGTTGA | 59.830 | 37.037 | 13.97 | 5.52 | 37.78 | 3.18 |
8477 | 23468 | 7.170998 | AGGACAAATTTCTACAGTACGAAGTTG | 59.829 | 37.037 | 0.00 | 8.66 | 37.78 | 3.16 |
8478 | 23469 | 7.215085 | AGGACAAATTTCTACAGTACGAAGTT | 58.785 | 34.615 | 0.00 | 0.00 | 37.78 | 2.66 |
8480 | 23471 | 8.752766 | TTAGGACAAATTTCTACAGTACGAAG | 57.247 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
8482 | 23473 | 9.793252 | GTATTAGGACAAATTTCTACAGTACGA | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 3.43 |
8483 | 23474 | 9.577110 | TGTATTAGGACAAATTTCTACAGTACG | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
8486 | 23477 | 9.614792 | GGATGTATTAGGACAAATTTCTACAGT | 57.385 | 33.333 | 0.00 | 0.00 | 31.83 | 3.55 |
8487 | 23478 | 8.765219 | CGGATGTATTAGGACAAATTTCTACAG | 58.235 | 37.037 | 0.00 | 0.00 | 31.83 | 2.74 |
8488 | 23479 | 7.713507 | CCGGATGTATTAGGACAAATTTCTACA | 59.286 | 37.037 | 0.00 | 0.00 | 31.83 | 2.74 |
8489 | 23480 | 7.929785 | TCCGGATGTATTAGGACAAATTTCTAC | 59.070 | 37.037 | 0.00 | 0.00 | 31.83 | 2.59 |
8490 | 23481 | 8.025270 | TCCGGATGTATTAGGACAAATTTCTA | 57.975 | 34.615 | 0.00 | 0.00 | 31.83 | 2.10 |
8491 | 23482 | 6.895782 | TCCGGATGTATTAGGACAAATTTCT | 58.104 | 36.000 | 0.00 | 0.00 | 31.83 | 2.52 |
8500 | 23491 | 6.781014 | AGAAATGTAGTCCGGATGTATTAGGA | 59.219 | 38.462 | 7.81 | 0.00 | 0.00 | 2.94 |
8501 | 23492 | 6.994221 | AGAAATGTAGTCCGGATGTATTAGG | 58.006 | 40.000 | 7.81 | 0.00 | 0.00 | 2.69 |
8502 | 23493 | 8.141909 | TGAAGAAATGTAGTCCGGATGTATTAG | 58.858 | 37.037 | 7.81 | 0.00 | 0.00 | 1.73 |
8503 | 23494 | 8.014070 | TGAAGAAATGTAGTCCGGATGTATTA | 57.986 | 34.615 | 7.81 | 0.00 | 0.00 | 0.98 |
8504 | 23495 | 6.884832 | TGAAGAAATGTAGTCCGGATGTATT | 58.115 | 36.000 | 7.81 | 3.86 | 0.00 | 1.89 |
8505 | 23496 | 6.323996 | TCTGAAGAAATGTAGTCCGGATGTAT | 59.676 | 38.462 | 7.81 | 0.00 | 0.00 | 2.29 |
8506 | 23497 | 5.655090 | TCTGAAGAAATGTAGTCCGGATGTA | 59.345 | 40.000 | 7.81 | 0.00 | 0.00 | 2.29 |
8507 | 23498 | 4.466370 | TCTGAAGAAATGTAGTCCGGATGT | 59.534 | 41.667 | 7.81 | 0.00 | 0.00 | 3.06 |
8508 | 23499 | 5.011090 | TCTGAAGAAATGTAGTCCGGATG | 57.989 | 43.478 | 7.81 | 0.00 | 0.00 | 3.51 |
8509 | 23500 | 5.677319 | TTCTGAAGAAATGTAGTCCGGAT | 57.323 | 39.130 | 7.81 | 0.00 | 0.00 | 4.18 |
8510 | 23501 | 5.477607 | TTTCTGAAGAAATGTAGTCCGGA | 57.522 | 39.130 | 0.00 | 0.00 | 38.94 | 5.14 |
8525 | 23516 | 9.151471 | CGAAGTCAAGGAATTACTATTTCTGAA | 57.849 | 33.333 | 0.00 | 0.00 | 29.68 | 3.02 |
8526 | 23517 | 8.528643 | TCGAAGTCAAGGAATTACTATTTCTGA | 58.471 | 33.333 | 0.00 | 0.00 | 29.68 | 3.27 |
8527 | 23518 | 8.596380 | GTCGAAGTCAAGGAATTACTATTTCTG | 58.404 | 37.037 | 0.00 | 0.00 | 29.68 | 3.02 |
8528 | 23519 | 8.532819 | AGTCGAAGTCAAGGAATTACTATTTCT | 58.467 | 33.333 | 0.00 | 0.00 | 30.44 | 2.52 |
8529 | 23520 | 8.705048 | AGTCGAAGTCAAGGAATTACTATTTC | 57.295 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
8533 | 23524 | 9.582431 | CAATAAGTCGAAGTCAAGGAATTACTA | 57.418 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
8534 | 23525 | 8.311836 | TCAATAAGTCGAAGTCAAGGAATTACT | 58.688 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
8535 | 23526 | 8.475331 | TCAATAAGTCGAAGTCAAGGAATTAC | 57.525 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
8536 | 23527 | 9.496873 | TTTCAATAAGTCGAAGTCAAGGAATTA | 57.503 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
8537 | 23528 | 7.979444 | TTCAATAAGTCGAAGTCAAGGAATT | 57.021 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
8538 | 23529 | 7.979444 | TTTCAATAAGTCGAAGTCAAGGAAT | 57.021 | 32.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8539 | 23530 | 7.713507 | TCTTTTCAATAAGTCGAAGTCAAGGAA | 59.286 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
8540 | 23531 | 7.170998 | GTCTTTTCAATAAGTCGAAGTCAAGGA | 59.829 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
8541 | 23532 | 7.042051 | TGTCTTTTCAATAAGTCGAAGTCAAGG | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 3.61 |
8542 | 23533 | 7.794349 | GTGTCTTTTCAATAAGTCGAAGTCAAG | 59.206 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
8543 | 23534 | 7.254658 | GGTGTCTTTTCAATAAGTCGAAGTCAA | 60.255 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
8544 | 23535 | 6.202188 | GGTGTCTTTTCAATAAGTCGAAGTCA | 59.798 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
8545 | 23536 | 6.424207 | AGGTGTCTTTTCAATAAGTCGAAGTC | 59.576 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
8546 | 23537 | 6.289064 | AGGTGTCTTTTCAATAAGTCGAAGT | 58.711 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8547 | 23538 | 6.787085 | AGGTGTCTTTTCAATAAGTCGAAG | 57.213 | 37.500 | 0.00 | 0.00 | 0.00 | 3.79 |
8548 | 23539 | 6.647895 | GGTAGGTGTCTTTTCAATAAGTCGAA | 59.352 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
8549 | 23540 | 6.014840 | AGGTAGGTGTCTTTTCAATAAGTCGA | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
8550 | 23541 | 6.164176 | AGGTAGGTGTCTTTTCAATAAGTCG | 58.836 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
8551 | 23542 | 7.981102 | AAGGTAGGTGTCTTTTCAATAAGTC | 57.019 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8552 | 23543 | 9.281371 | GTAAAGGTAGGTGTCTTTTCAATAAGT | 57.719 | 33.333 | 0.00 | 0.00 | 35.22 | 2.24 |
8553 | 23544 | 9.280174 | TGTAAAGGTAGGTGTCTTTTCAATAAG | 57.720 | 33.333 | 0.00 | 0.00 | 35.22 | 1.73 |
8554 | 23545 | 9.059260 | GTGTAAAGGTAGGTGTCTTTTCAATAA | 57.941 | 33.333 | 0.00 | 0.00 | 34.03 | 1.40 |
8555 | 23546 | 8.212312 | TGTGTAAAGGTAGGTGTCTTTTCAATA | 58.788 | 33.333 | 0.00 | 0.00 | 34.03 | 1.90 |
8556 | 23547 | 7.057894 | TGTGTAAAGGTAGGTGTCTTTTCAAT | 58.942 | 34.615 | 0.00 | 0.00 | 34.03 | 2.57 |
8557 | 23548 | 6.416415 | TGTGTAAAGGTAGGTGTCTTTTCAA | 58.584 | 36.000 | 0.00 | 0.00 | 34.03 | 2.69 |
8558 | 23549 | 5.991861 | TGTGTAAAGGTAGGTGTCTTTTCA | 58.008 | 37.500 | 0.00 | 0.00 | 35.22 | 2.69 |
8559 | 23550 | 6.072673 | CCATGTGTAAAGGTAGGTGTCTTTTC | 60.073 | 42.308 | 0.00 | 0.00 | 35.22 | 2.29 |
8560 | 23551 | 5.768164 | CCATGTGTAAAGGTAGGTGTCTTTT | 59.232 | 40.000 | 0.00 | 0.00 | 35.22 | 2.27 |
8561 | 23552 | 5.163131 | ACCATGTGTAAAGGTAGGTGTCTTT | 60.163 | 40.000 | 0.00 | 0.00 | 37.09 | 2.52 |
8562 | 23553 | 4.349930 | ACCATGTGTAAAGGTAGGTGTCTT | 59.650 | 41.667 | 0.00 | 0.00 | 32.92 | 3.01 |
8563 | 23554 | 3.908103 | ACCATGTGTAAAGGTAGGTGTCT | 59.092 | 43.478 | 0.00 | 0.00 | 32.92 | 3.41 |
8564 | 23555 | 4.000988 | CACCATGTGTAAAGGTAGGTGTC | 58.999 | 47.826 | 0.00 | 0.00 | 40.00 | 3.67 |
8565 | 23556 | 3.809324 | GCACCATGTGTAAAGGTAGGTGT | 60.809 | 47.826 | 10.03 | 0.00 | 45.08 | 4.16 |
8566 | 23557 | 2.747446 | GCACCATGTGTAAAGGTAGGTG | 59.253 | 50.000 | 0.00 | 0.00 | 45.83 | 4.00 |
8567 | 23558 | 2.373836 | TGCACCATGTGTAAAGGTAGGT | 59.626 | 45.455 | 0.00 | 0.00 | 35.75 | 3.08 |
8568 | 23559 | 3.066291 | TGCACCATGTGTAAAGGTAGG | 57.934 | 47.619 | 0.00 | 0.00 | 35.75 | 3.18 |
8569 | 23560 | 5.446143 | TTTTGCACCATGTGTAAAGGTAG | 57.554 | 39.130 | 9.74 | 0.00 | 45.43 | 3.18 |
8570 | 23561 | 6.412362 | AATTTTGCACCATGTGTAAAGGTA | 57.588 | 33.333 | 9.74 | 0.00 | 45.43 | 3.08 |
8571 | 23562 | 4.953940 | ATTTTGCACCATGTGTAAAGGT | 57.046 | 36.364 | 9.74 | 2.62 | 45.43 | 3.50 |
8572 | 23563 | 5.049543 | CCAAATTTTGCACCATGTGTAAAGG | 60.050 | 40.000 | 9.74 | 5.41 | 45.43 | 3.11 |
8573 | 23564 | 5.049543 | CCCAAATTTTGCACCATGTGTAAAG | 60.050 | 40.000 | 9.74 | 0.95 | 45.43 | 1.85 |
8574 | 23565 | 4.818546 | CCCAAATTTTGCACCATGTGTAAA | 59.181 | 37.500 | 6.42 | 6.42 | 43.85 | 2.01 |
8575 | 23566 | 4.384056 | CCCAAATTTTGCACCATGTGTAA | 58.616 | 39.130 | 3.50 | 0.00 | 36.45 | 2.41 |
8576 | 23567 | 3.805108 | GCCCAAATTTTGCACCATGTGTA | 60.805 | 43.478 | 3.50 | 0.00 | 35.75 | 2.90 |
8577 | 23568 | 2.848691 | CCCAAATTTTGCACCATGTGT | 58.151 | 42.857 | 3.50 | 0.00 | 35.75 | 3.72 |
8578 | 23569 | 1.536331 | GCCCAAATTTTGCACCATGTG | 59.464 | 47.619 | 3.50 | 0.00 | 36.51 | 3.21 |
8579 | 23570 | 1.877258 | CGCCCAAATTTTGCACCATGT | 60.877 | 47.619 | 3.50 | 0.00 | 0.00 | 3.21 |
8580 | 23571 | 0.797542 | CGCCCAAATTTTGCACCATG | 59.202 | 50.000 | 3.50 | 0.00 | 0.00 | 3.66 |
8581 | 23572 | 0.396060 | ACGCCCAAATTTTGCACCAT | 59.604 | 45.000 | 3.50 | 0.00 | 0.00 | 3.55 |
8582 | 23573 | 1.040646 | TACGCCCAAATTTTGCACCA | 58.959 | 45.000 | 3.50 | 0.00 | 0.00 | 4.17 |
8583 | 23574 | 2.267426 | GATACGCCCAAATTTTGCACC | 58.733 | 47.619 | 3.50 | 0.00 | 0.00 | 5.01 |
8584 | 23575 | 2.953020 | TGATACGCCCAAATTTTGCAC | 58.047 | 42.857 | 3.50 | 0.00 | 0.00 | 4.57 |
8585 | 23576 | 3.667497 | TTGATACGCCCAAATTTTGCA | 57.333 | 38.095 | 3.50 | 0.00 | 0.00 | 4.08 |
8586 | 23577 | 6.292811 | CCATATTTGATACGCCCAAATTTTGC | 60.293 | 38.462 | 13.09 | 0.00 | 42.31 | 3.68 |
8587 | 23578 | 6.760770 | ACCATATTTGATACGCCCAAATTTTG | 59.239 | 34.615 | 13.09 | 1.99 | 42.31 | 2.44 |
8588 | 23579 | 6.883744 | ACCATATTTGATACGCCCAAATTTT | 58.116 | 32.000 | 13.09 | 2.98 | 42.31 | 1.82 |
8589 | 23580 | 6.478512 | ACCATATTTGATACGCCCAAATTT | 57.521 | 33.333 | 13.09 | 5.62 | 42.31 | 1.82 |
8590 | 23581 | 6.293735 | CGTACCATATTTGATACGCCCAAATT | 60.294 | 38.462 | 13.09 | 2.10 | 42.31 | 1.82 |
8591 | 23582 | 5.180492 | CGTACCATATTTGATACGCCCAAAT | 59.820 | 40.000 | 12.65 | 12.65 | 43.93 | 2.32 |
8592 | 23583 | 4.512198 | CGTACCATATTTGATACGCCCAAA | 59.488 | 41.667 | 0.00 | 0.00 | 37.82 | 3.28 |
8593 | 23584 | 4.059511 | CGTACCATATTTGATACGCCCAA | 58.940 | 43.478 | 0.00 | 0.00 | 34.62 | 4.12 |
8594 | 23585 | 3.321396 | TCGTACCATATTTGATACGCCCA | 59.679 | 43.478 | 5.29 | 0.00 | 40.10 | 5.36 |
8595 | 23586 | 3.916761 | TCGTACCATATTTGATACGCCC | 58.083 | 45.455 | 5.29 | 0.00 | 40.10 | 6.13 |
8596 | 23587 | 5.165676 | TGATCGTACCATATTTGATACGCC | 58.834 | 41.667 | 5.29 | 1.49 | 40.10 | 5.68 |
8597 | 23588 | 6.584942 | TCTTGATCGTACCATATTTGATACGC | 59.415 | 38.462 | 5.29 | 0.00 | 40.10 | 4.42 |
8598 | 23589 | 8.515473 | TTCTTGATCGTACCATATTTGATACG | 57.485 | 34.615 | 3.87 | 3.87 | 41.31 | 3.06 |
8599 | 23590 | 8.926710 | CCTTCTTGATCGTACCATATTTGATAC | 58.073 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
8600 | 23591 | 7.602644 | GCCTTCTTGATCGTACCATATTTGATA | 59.397 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
8601 | 23592 | 6.428159 | GCCTTCTTGATCGTACCATATTTGAT | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
8602 | 23593 | 5.758296 | GCCTTCTTGATCGTACCATATTTGA | 59.242 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8603 | 23594 | 5.333339 | CGCCTTCTTGATCGTACCATATTTG | 60.333 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
8604 | 23595 | 4.750098 | CGCCTTCTTGATCGTACCATATTT | 59.250 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
8605 | 23596 | 4.202223 | ACGCCTTCTTGATCGTACCATATT | 60.202 | 41.667 | 0.00 | 0.00 | 33.02 | 1.28 |
8606 | 23597 | 3.321111 | ACGCCTTCTTGATCGTACCATAT | 59.679 | 43.478 | 0.00 | 0.00 | 33.02 | 1.78 |
8607 | 23598 | 2.691526 | ACGCCTTCTTGATCGTACCATA | 59.308 | 45.455 | 0.00 | 0.00 | 33.02 | 2.74 |
8608 | 23599 | 1.480954 | ACGCCTTCTTGATCGTACCAT | 59.519 | 47.619 | 0.00 | 0.00 | 33.02 | 3.55 |
8609 | 23600 | 0.892755 | ACGCCTTCTTGATCGTACCA | 59.107 | 50.000 | 0.00 | 0.00 | 33.02 | 3.25 |
8610 | 23601 | 1.135199 | TGACGCCTTCTTGATCGTACC | 60.135 | 52.381 | 0.00 | 0.00 | 35.12 | 3.34 |
8611 | 23602 | 1.918609 | GTGACGCCTTCTTGATCGTAC | 59.081 | 52.381 | 0.00 | 0.00 | 35.12 | 3.67 |
8612 | 23603 | 1.816835 | AGTGACGCCTTCTTGATCGTA | 59.183 | 47.619 | 0.00 | 0.00 | 35.12 | 3.43 |
8613 | 23604 | 0.603569 | AGTGACGCCTTCTTGATCGT | 59.396 | 50.000 | 0.00 | 0.00 | 37.92 | 3.73 |
8614 | 23605 | 1.714794 | AAGTGACGCCTTCTTGATCG | 58.285 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
8615 | 23606 | 2.413371 | GCAAAGTGACGCCTTCTTGATC | 60.413 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
8616 | 23607 | 1.537202 | GCAAAGTGACGCCTTCTTGAT | 59.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
8617 | 23608 | 0.944386 | GCAAAGTGACGCCTTCTTGA | 59.056 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
8618 | 23609 | 0.662619 | TGCAAAGTGACGCCTTCTTG | 59.337 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
8619 | 23610 | 1.537202 | GATGCAAAGTGACGCCTTCTT | 59.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
8620 | 23611 | 1.160137 | GATGCAAAGTGACGCCTTCT | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
8621 | 23612 | 1.160137 | AGATGCAAAGTGACGCCTTC | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
8622 | 23613 | 1.267806 | CAAGATGCAAAGTGACGCCTT | 59.732 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
8623 | 23614 | 0.877071 | CAAGATGCAAAGTGACGCCT | 59.123 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
8624 | 23615 | 0.593128 | ACAAGATGCAAAGTGACGCC | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
8625 | 23616 | 2.046313 | CAACAAGATGCAAAGTGACGC | 58.954 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
8626 | 23617 | 3.038017 | CACAACAAGATGCAAAGTGACG | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
8627 | 23618 | 2.791004 | GCACAACAAGATGCAAAGTGAC | 59.209 | 45.455 | 0.00 | 0.00 | 41.65 | 3.67 |
8628 | 23619 | 2.541383 | CGCACAACAAGATGCAAAGTGA | 60.541 | 45.455 | 0.00 | 0.00 | 42.17 | 3.41 |
8629 | 23620 | 1.782569 | CGCACAACAAGATGCAAAGTG | 59.217 | 47.619 | 0.00 | 0.00 | 42.17 | 3.16 |
8630 | 23621 | 1.405105 | ACGCACAACAAGATGCAAAGT | 59.595 | 42.857 | 0.00 | 0.00 | 42.17 | 2.66 |
8631 | 23622 | 2.124011 | ACGCACAACAAGATGCAAAG | 57.876 | 45.000 | 0.00 | 0.00 | 42.17 | 2.77 |
8632 | 23623 | 3.913548 | ATACGCACAACAAGATGCAAA | 57.086 | 38.095 | 0.00 | 0.00 | 42.17 | 3.68 |
8633 | 23624 | 3.913548 | AATACGCACAACAAGATGCAA | 57.086 | 38.095 | 0.00 | 0.00 | 42.17 | 4.08 |
8634 | 23625 | 3.913548 | AAATACGCACAACAAGATGCA | 57.086 | 38.095 | 0.00 | 0.00 | 42.17 | 3.96 |
8635 | 23626 | 3.608073 | GGAAAATACGCACAACAAGATGC | 59.392 | 43.478 | 0.00 | 0.00 | 38.52 | 3.91 |
8636 | 23627 | 3.845775 | CGGAAAATACGCACAACAAGATG | 59.154 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
8637 | 23628 | 3.749088 | TCGGAAAATACGCACAACAAGAT | 59.251 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
8638 | 23629 | 3.132160 | TCGGAAAATACGCACAACAAGA | 58.868 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
8639 | 23630 | 3.529634 | TCGGAAAATACGCACAACAAG | 57.470 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
8640 | 23631 | 3.965292 | TTCGGAAAATACGCACAACAA | 57.035 | 38.095 | 0.00 | 0.00 | 0.00 | 2.83 |
8641 | 23632 | 3.120130 | GGATTCGGAAAATACGCACAACA | 60.120 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
8642 | 23633 | 3.126343 | AGGATTCGGAAAATACGCACAAC | 59.874 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
8643 | 23634 | 3.340034 | AGGATTCGGAAAATACGCACAA | 58.660 | 40.909 | 0.00 | 0.00 | 0.00 | 3.33 |
8644 | 23635 | 2.980568 | AGGATTCGGAAAATACGCACA | 58.019 | 42.857 | 0.00 | 0.00 | 0.00 | 4.57 |
8645 | 23636 | 3.936661 | GAAGGATTCGGAAAATACGCAC | 58.063 | 45.455 | 0.00 | 0.00 | 34.17 | 5.34 |
8681 | 23672 | 9.331282 | GCATCCTATAAGAGAGTGTAAATTGTT | 57.669 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
8682 | 23673 | 8.709308 | AGCATCCTATAAGAGAGTGTAAATTGT | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
8683 | 23674 | 9.553064 | AAGCATCCTATAAGAGAGTGTAAATTG | 57.447 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
8687 | 23678 | 8.861086 | CCTTAAGCATCCTATAAGAGAGTGTAA | 58.139 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
8688 | 23679 | 7.451877 | CCCTTAAGCATCCTATAAGAGAGTGTA | 59.548 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
8689 | 23680 | 6.268847 | CCCTTAAGCATCCTATAAGAGAGTGT | 59.731 | 42.308 | 0.00 | 0.00 | 0.00 | 3.55 |
8690 | 23681 | 6.696411 | CCCTTAAGCATCCTATAAGAGAGTG | 58.304 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
8691 | 23682 | 5.247337 | GCCCTTAAGCATCCTATAAGAGAGT | 59.753 | 44.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8692 | 23683 | 5.483583 | AGCCCTTAAGCATCCTATAAGAGAG | 59.516 | 44.000 | 0.00 | 0.00 | 34.23 | 3.20 |
8693 | 23684 | 5.407049 | AGCCCTTAAGCATCCTATAAGAGA | 58.593 | 41.667 | 0.00 | 0.00 | 34.23 | 3.10 |
8694 | 23685 | 5.753721 | AGCCCTTAAGCATCCTATAAGAG | 57.246 | 43.478 | 0.00 | 0.00 | 34.23 | 2.85 |
8695 | 23686 | 6.299141 | CAAAGCCCTTAAGCATCCTATAAGA | 58.701 | 40.000 | 0.00 | 0.00 | 34.23 | 2.10 |
8696 | 23687 | 5.048434 | GCAAAGCCCTTAAGCATCCTATAAG | 60.048 | 44.000 | 0.00 | 0.00 | 34.23 | 1.73 |
8697 | 23688 | 4.827284 | GCAAAGCCCTTAAGCATCCTATAA | 59.173 | 41.667 | 0.00 | 0.00 | 34.23 | 0.98 |
8698 | 23689 | 4.141274 | TGCAAAGCCCTTAAGCATCCTATA | 60.141 | 41.667 | 0.00 | 0.00 | 31.69 | 1.31 |
8699 | 23690 | 3.225940 | GCAAAGCCCTTAAGCATCCTAT | 58.774 | 45.455 | 0.00 | 0.00 | 34.23 | 2.57 |
8700 | 23691 | 2.025416 | TGCAAAGCCCTTAAGCATCCTA | 60.025 | 45.455 | 0.00 | 0.00 | 31.69 | 2.94 |
8701 | 23692 | 1.272648 | TGCAAAGCCCTTAAGCATCCT | 60.273 | 47.619 | 0.00 | 0.00 | 31.69 | 3.24 |
8702 | 23693 | 1.185315 | TGCAAAGCCCTTAAGCATCC | 58.815 | 50.000 | 0.00 | 0.00 | 31.69 | 3.51 |
8703 | 23694 | 3.317603 | TTTGCAAAGCCCTTAAGCATC | 57.682 | 42.857 | 8.05 | 0.00 | 34.98 | 3.91 |
8704 | 23695 | 3.767902 | TTTTGCAAAGCCCTTAAGCAT | 57.232 | 38.095 | 12.41 | 0.00 | 34.98 | 3.79 |
8705 | 23696 | 3.133721 | TCTTTTTGCAAAGCCCTTAAGCA | 59.866 | 39.130 | 12.41 | 4.57 | 39.56 | 3.91 |
8706 | 23697 | 3.727726 | TCTTTTTGCAAAGCCCTTAAGC | 58.272 | 40.909 | 12.41 | 0.00 | 39.56 | 3.09 |
8707 | 23698 | 4.152938 | GCATCTTTTTGCAAAGCCCTTAAG | 59.847 | 41.667 | 12.41 | 11.70 | 42.31 | 1.85 |
8708 | 23699 | 4.064388 | GCATCTTTTTGCAAAGCCCTTAA | 58.936 | 39.130 | 12.41 | 1.82 | 42.31 | 1.85 |
8709 | 23700 | 3.663025 | GCATCTTTTTGCAAAGCCCTTA | 58.337 | 40.909 | 12.41 | 0.00 | 42.31 | 2.69 |
8710 | 23701 | 2.497138 | GCATCTTTTTGCAAAGCCCTT | 58.503 | 42.857 | 12.41 | 0.00 | 42.31 | 3.95 |
8877 | 23868 | 2.225491 | CGTTCTCTCCGCCAAAATTGAA | 59.775 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
8882 | 23873 | 0.105224 | TGACGTTCTCTCCGCCAAAA | 59.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
8933 | 23924 | 2.024414 | GAATGCCCAGAATAAGCGGTT | 58.976 | 47.619 | 4.76 | 4.76 | 0.00 | 4.44 |
9001 | 23992 | 2.496070 | TCCAGTGAGAAAGGTACCATCG | 59.504 | 50.000 | 15.94 | 0.00 | 0.00 | 3.84 |
9135 | 24126 | 2.169789 | CCCATCTTCACGCAGCTCG | 61.170 | 63.158 | 4.36 | 4.36 | 45.38 | 5.03 |
9232 | 24223 | 1.883275 | CTCCACTCTTCTGACGACTGT | 59.117 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.