Multiple sequence alignment - TraesCS5B01G138800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G138800 chr5B 100.000 4133 0 0 1 4133 262562442 262566574 0.000000e+00 7633.0
1 TraesCS5B01G138800 chr5B 96.154 52 2 0 1266 1317 262563659 262563710 7.360000e-13 86.1
2 TraesCS5B01G138800 chr5B 96.154 52 2 0 1218 1269 262563707 262563758 7.360000e-13 86.1
3 TraesCS5B01G138800 chr5B 94.444 54 1 2 3211 3263 227832881 227832829 9.520000e-12 82.4
4 TraesCS5B01G138800 chr5B 88.889 63 5 2 3201 3263 157028849 157028789 4.430000e-10 76.8
5 TraesCS5B01G138800 chr5A 91.647 2514 120 36 1223 3687 312751696 312754168 0.000000e+00 3397.0
6 TraesCS5B01G138800 chr5A 96.205 448 10 2 3686 4133 609201677 609201237 0.000000e+00 726.0
7 TraesCS5B01G138800 chr5A 85.694 720 52 19 504 1204 312751056 312751743 0.000000e+00 712.0
8 TraesCS5B01G138800 chr5A 91.137 519 20 15 19 521 312750533 312751041 0.000000e+00 680.0
9 TraesCS5B01G138800 chr5A 96.154 52 2 0 3212 3263 394333351 394333300 7.360000e-13 86.1
10 TraesCS5B01G138800 chr5A 92.857 56 3 1 3208 3263 230755581 230755635 3.420000e-11 80.5
11 TraesCS5B01G138800 chr5D 96.198 1999 68 4 1226 3219 241113845 241111850 0.000000e+00 3264.0
12 TraesCS5B01G138800 chr5D 88.574 1234 69 29 1 1204 241114992 241113801 0.000000e+00 1432.0
13 TraesCS5B01G138800 chr5D 91.818 330 9 9 3368 3687 241110385 241110064 1.050000e-120 444.0
14 TraesCS5B01G138800 chr5D 90.909 110 7 2 3258 3366 241111852 241111745 1.200000e-30 145.0
15 TraesCS5B01G138800 chr3B 97.991 448 2 1 3686 4133 735975848 735975408 0.000000e+00 771.0
16 TraesCS5B01G138800 chr3B 95.759 448 12 2 3686 4133 779518122 779517682 0.000000e+00 715.0
17 TraesCS5B01G138800 chr3B 95.546 449 12 2 3685 4133 804134061 804134501 0.000000e+00 712.0
18 TraesCS5B01G138800 chr1A 97.550 449 4 1 3685 4133 565151855 565151414 0.000000e+00 761.0
19 TraesCS5B01G138800 chr2B 96.652 448 8 1 3686 4133 53464087 53463647 0.000000e+00 737.0
20 TraesCS5B01G138800 chr2B 96.205 448 9 2 3686 4133 520926946 520926507 0.000000e+00 726.0
21 TraesCS5B01G138800 chr2B 90.164 61 5 1 3204 3263 710286759 710286819 1.230000e-10 78.7
22 TraesCS5B01G138800 chr6B 95.759 448 12 2 3686 4133 202354688 202354248 0.000000e+00 715.0
23 TraesCS5B01G138800 chr3D 94.260 453 17 5 3683 4133 572501884 572502329 0.000000e+00 684.0
24 TraesCS5B01G138800 chrUn 96.296 54 1 1 3214 3267 136400482 136400430 2.050000e-13 87.9
25 TraesCS5B01G138800 chr2A 90.164 61 5 1 3204 3263 69326608 69326668 1.230000e-10 78.7
26 TraesCS5B01G138800 chr7B 85.915 71 4 5 3223 3291 657562027 657561961 2.060000e-08 71.3
27 TraesCS5B01G138800 chr2D 78.788 99 17 4 3163 3259 413042057 413042153 3.450000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G138800 chr5B 262562442 262566574 4132 False 2601.733333 7633 97.436000 1 4133 3 chr5B.!!$F1 4132
1 TraesCS5B01G138800 chr5A 312750533 312754168 3635 False 1596.333333 3397 89.492667 19 3687 3 chr5A.!!$F2 3668
2 TraesCS5B01G138800 chr5D 241110064 241114992 4928 True 1321.250000 3264 91.874750 1 3687 4 chr5D.!!$R1 3686

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 59 0.191563 TACCCCACCACACTACCACT 59.808 55.0 0.00 0.00 0.00 4.00 F
1092 1187 0.398664 CGATGTTCCCTACCCCTCCT 60.399 60.0 0.00 0.00 0.00 3.69 F
1350 1445 0.671781 CAGTTCCTCTGAAGGCCACG 60.672 60.0 5.01 0.00 46.27 4.94 F
2571 2666 0.606401 ATTGCACCAAGGACTGTCGG 60.606 55.0 1.07 0.18 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1114 1209 0.474184 AATGGTGGGTCGGATGATCC 59.526 55.0 0.08 0.08 46.43 3.36 R
2556 2651 0.105964 TGTTCCGACAGTCCTTGGTG 59.894 55.0 0.00 0.00 0.00 4.17 R
2688 2783 0.320683 CGTCCATGACTTGACCAGCA 60.321 55.0 0.00 0.00 0.00 4.41 R
3778 5291 0.033405 TAGTGAGGAAGGAGACGGGG 60.033 60.0 0.00 0.00 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.133294 CCCTTTTTACCCCACCACACT 60.133 52.381 0.00 0.00 0.00 3.55
56 59 0.191563 TACCCCACCACACTACCACT 59.808 55.000 0.00 0.00 0.00 4.00
61 64 1.140052 CCACCACACTACCACTTGTGA 59.860 52.381 1.89 0.00 45.03 3.58
152 162 1.968703 GACGTCCTCGAGGTCAGTCG 61.969 65.000 30.17 25.33 43.95 4.18
191 213 2.525055 TGCGATTTTATTTTCTGGCGC 58.475 42.857 0.00 0.00 43.07 6.53
207 229 2.943690 TGGCGCTCTTGAGTAGTAGTAG 59.056 50.000 7.64 0.00 0.00 2.57
208 230 2.944349 GGCGCTCTTGAGTAGTAGTAGT 59.056 50.000 7.64 0.00 0.00 2.73
209 231 4.125703 GGCGCTCTTGAGTAGTAGTAGTA 58.874 47.826 7.64 0.00 0.00 1.82
210 232 4.574013 GGCGCTCTTGAGTAGTAGTAGTAA 59.426 45.833 7.64 0.00 0.00 2.24
211 233 5.239087 GGCGCTCTTGAGTAGTAGTAGTAAT 59.761 44.000 7.64 0.00 0.00 1.89
215 237 9.570488 CGCTCTTGAGTAGTAGTAGTAATTTTT 57.430 33.333 0.00 0.00 0.00 1.94
340 372 4.760530 TTGGTTCATATGTGAGGAGGAG 57.239 45.455 1.90 0.00 35.39 3.69
344 376 3.251016 TCATATGTGAGGAGGAGAGGG 57.749 52.381 1.90 0.00 0.00 4.30
498 534 7.383843 GTGTTTTCCTCTGTTTCTTTTGTTTCA 59.616 33.333 0.00 0.00 0.00 2.69
544 612 2.056577 GCTTGCTGCATTTCACAAGAC 58.943 47.619 1.84 5.58 41.59 3.01
558 626 2.291741 CACAAGACCCTGTTCTTTCAGC 59.708 50.000 0.00 0.00 33.31 4.26
563 631 3.073650 AGACCCTGTTCTTTCAGCTCAAT 59.926 43.478 0.00 0.00 34.47 2.57
564 632 3.152341 ACCCTGTTCTTTCAGCTCAATG 58.848 45.455 0.00 0.00 34.47 2.82
957 1052 7.579761 TCCATATACATCAGCTAGCATCTAG 57.420 40.000 18.83 5.10 0.00 2.43
958 1053 7.122048 TCCATATACATCAGCTAGCATCTAGT 58.878 38.462 18.83 10.88 0.00 2.57
959 1054 8.275040 TCCATATACATCAGCTAGCATCTAGTA 58.725 37.037 18.83 12.68 0.00 1.82
1014 1109 1.891933 TCACCATGGGGAGCTTGATA 58.108 50.000 14.36 0.00 38.05 2.15
1025 1120 2.468831 GAGCTTGATAGACGAAGCAGG 58.531 52.381 0.00 0.00 45.88 4.85
1068 1163 1.675714 CCGAAGCCATTGCACTCACTA 60.676 52.381 0.00 0.00 41.13 2.74
1092 1187 0.398664 CGATGTTCCCTACCCCTCCT 60.399 60.000 0.00 0.00 0.00 3.69
1109 1204 3.007398 CCTCCTGGGTATGATCTAGCAAC 59.993 52.174 0.00 0.00 0.00 4.17
1110 1205 3.900601 CTCCTGGGTATGATCTAGCAACT 59.099 47.826 0.00 0.00 0.00 3.16
1111 1206 3.643320 TCCTGGGTATGATCTAGCAACTG 59.357 47.826 0.00 0.00 0.00 3.16
1112 1207 3.397482 CTGGGTATGATCTAGCAACTGC 58.603 50.000 0.00 0.00 42.49 4.40
1141 1236 1.831736 CCGACCCACCATTCTTCTACT 59.168 52.381 0.00 0.00 0.00 2.57
1142 1237 3.028850 CCGACCCACCATTCTTCTACTA 58.971 50.000 0.00 0.00 0.00 1.82
1143 1238 3.181478 CCGACCCACCATTCTTCTACTAC 60.181 52.174 0.00 0.00 0.00 2.73
1157 1252 6.792326 TCTTCTACTACATCACACCAATACG 58.208 40.000 0.00 0.00 0.00 3.06
1158 1253 6.600427 TCTTCTACTACATCACACCAATACGA 59.400 38.462 0.00 0.00 0.00 3.43
1186 1281 4.496336 GGCCGGCTCCAGCTTCAT 62.496 66.667 28.56 0.00 41.70 2.57
1187 1282 2.439156 GCCGGCTCCAGCTTCATT 60.439 61.111 22.15 0.00 41.70 2.57
1188 1283 2.048603 GCCGGCTCCAGCTTCATTT 61.049 57.895 22.15 0.00 41.70 2.32
1189 1284 1.805254 CCGGCTCCAGCTTCATTTG 59.195 57.895 0.00 0.00 41.70 2.32
1190 1285 1.138247 CGGCTCCAGCTTCATTTGC 59.862 57.895 0.00 0.00 41.70 3.68
1191 1286 1.310933 CGGCTCCAGCTTCATTTGCT 61.311 55.000 0.00 0.00 42.06 3.91
1196 1291 3.704151 AGCTTCATTTGCTGGGCC 58.296 55.556 0.00 0.00 39.56 5.80
1197 1292 2.182537 GCTTCATTTGCTGGGCCG 59.817 61.111 0.00 0.00 0.00 6.13
1198 1293 2.182537 CTTCATTTGCTGGGCCGC 59.817 61.111 12.46 12.46 0.00 6.53
1199 1294 3.360956 CTTCATTTGCTGGGCCGCC 62.361 63.158 15.82 0.00 0.00 6.13
1219 1314 4.106925 CAGGGCCCTGCTCCTCAC 62.107 72.222 38.39 0.00 37.24 3.51
1224 1319 4.020617 CCCTGCTCCTCACCGCAA 62.021 66.667 0.00 0.00 35.46 4.85
1225 1320 2.743928 CCTGCTCCTCACCGCAAC 60.744 66.667 0.00 0.00 35.46 4.17
1226 1321 2.031012 CTGCTCCTCACCGCAACA 59.969 61.111 0.00 0.00 35.46 3.33
1227 1322 1.597854 CTGCTCCTCACCGCAACAA 60.598 57.895 0.00 0.00 35.46 2.83
1228 1323 1.845809 CTGCTCCTCACCGCAACAAC 61.846 60.000 0.00 0.00 35.46 3.32
1229 1324 1.891919 GCTCCTCACCGCAACAACA 60.892 57.895 0.00 0.00 0.00 3.33
1230 1325 1.941812 CTCCTCACCGCAACAACAC 59.058 57.895 0.00 0.00 0.00 3.32
1231 1326 1.507141 CTCCTCACCGCAACAACACC 61.507 60.000 0.00 0.00 0.00 4.16
1232 1327 2.551912 CCTCACCGCAACAACACCC 61.552 63.158 0.00 0.00 0.00 4.61
1233 1328 1.525995 CTCACCGCAACAACACCCT 60.526 57.895 0.00 0.00 0.00 4.34
1234 1329 1.785041 CTCACCGCAACAACACCCTG 61.785 60.000 0.00 0.00 0.00 4.45
1235 1330 2.518349 ACCGCAACAACACCCTGG 60.518 61.111 0.00 0.00 0.00 4.45
1236 1331 3.294493 CCGCAACAACACCCTGGG 61.294 66.667 12.28 12.28 0.00 4.45
1237 1332 3.977244 CGCAACAACACCCTGGGC 61.977 66.667 14.08 0.00 0.00 5.36
1238 1333 3.615709 GCAACAACACCCTGGGCC 61.616 66.667 14.08 0.00 0.00 5.80
1239 1334 3.294493 CAACAACACCCTGGGCCG 61.294 66.667 14.08 6.96 0.00 6.13
1240 1335 4.596585 AACAACACCCTGGGCCGG 62.597 66.667 14.08 5.01 0.00 6.13
1341 1436 2.266055 GGGTCCGCAGTTCCTCTG 59.734 66.667 0.00 0.00 46.12 3.35
1350 1445 0.671781 CAGTTCCTCTGAAGGCCACG 60.672 60.000 5.01 0.00 46.27 4.94
1458 1553 3.340814 TCTTCATCTTCACCCAAGAGC 57.659 47.619 0.00 0.00 44.71 4.09
1584 1679 2.840753 GGACAACCCAAGGGAGGCA 61.841 63.158 13.15 0.00 38.96 4.75
1844 1939 1.104630 GACTACCTGTCGGCTAAGCT 58.895 55.000 0.00 0.00 35.81 3.74
1845 1940 1.477295 GACTACCTGTCGGCTAAGCTT 59.523 52.381 3.48 3.48 35.81 3.74
1846 1941 1.204941 ACTACCTGTCGGCTAAGCTTG 59.795 52.381 9.86 0.01 0.00 4.01
2076 2171 1.841556 TGCACGGGACCCTTTCTCT 60.842 57.895 9.41 0.00 0.00 3.10
2109 2204 4.439057 GCAAGGTTTACATCTACGATGGA 58.561 43.478 8.53 0.00 0.00 3.41
2160 2255 1.228154 GGCCAAGAACGGGTTCAGT 60.228 57.895 13.52 0.00 41.84 3.41
2196 2291 4.682714 AGGAGGGAGCCAGGGCAA 62.683 66.667 13.63 0.00 44.88 4.52
2241 2336 2.727123 TGACAGAAAAGTGGAAGGCA 57.273 45.000 0.00 0.00 0.00 4.75
2466 2561 3.707700 AATTGTTCGTGCGCGCGA 61.708 55.556 39.09 39.09 39.28 5.87
2496 2591 2.280628 GGCGATCTTCCCTACAACTTG 58.719 52.381 0.00 0.00 0.00 3.16
2556 2651 1.975363 GCTCTCGTGACTGCCATTGC 61.975 60.000 0.00 0.00 38.26 3.56
2571 2666 0.606401 ATTGCACCAAGGACTGTCGG 60.606 55.000 1.07 0.18 0.00 4.79
2731 2826 1.332686 CCAACATGAGCATGGATGTCG 59.667 52.381 14.35 0.00 42.91 4.35
2874 2972 3.734463 TCCTGTCGTGATAAGTGCAAAA 58.266 40.909 0.00 0.00 0.00 2.44
2988 3086 2.138320 CCGCATATCATGTTCTTCGCT 58.862 47.619 0.00 0.00 0.00 4.93
3006 3104 4.160329 TCGCTATGAAACATATCCCTCCT 58.840 43.478 0.00 0.00 0.00 3.69
3160 3258 3.763931 TGCTGGGCATAAACAAGGT 57.236 47.368 0.00 0.00 31.71 3.50
3162 3260 2.442413 TGCTGGGCATAAACAAGGTAC 58.558 47.619 0.00 0.00 31.71 3.34
3164 3262 2.423538 GCTGGGCATAAACAAGGTACAG 59.576 50.000 0.00 0.00 0.00 2.74
3167 3265 4.730966 TGGGCATAAACAAGGTACAGAAA 58.269 39.130 0.00 0.00 0.00 2.52
3168 3266 5.141182 TGGGCATAAACAAGGTACAGAAAA 58.859 37.500 0.00 0.00 0.00 2.29
3219 3337 7.364970 GTTTTCCGGTCATGTTTAACAAGTAT 58.635 34.615 0.66 0.00 0.00 2.12
3235 3353 4.430908 CAAGTATTGTACTCCCTCCGTTC 58.569 47.826 0.00 0.00 42.34 3.95
3237 3355 1.946984 ATTGTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
3238 3356 1.719529 TTGTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
3239 3357 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
3241 3359 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
3242 3360 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
3243 3361 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3244 3362 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3245 3363 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3246 3364 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3247 3365 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3248 3366 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3249 3367 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3250 3368 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3251 3369 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3252 3370 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3253 3371 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
3254 3372 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
3255 3373 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
3256 3374 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3257 3375 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
3258 3376 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3259 3377 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3260 3378 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
3261 3379 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
3267 3385 7.371936 AGATGACTCAACTTTGTACTAGTGTC 58.628 38.462 5.39 0.71 0.00 3.67
3359 3477 5.527951 TGCTAGAGAAGAACGTATCCTACAG 59.472 44.000 0.00 0.00 0.00 2.74
3374 4850 7.545265 CGTATCCTACAGACTACTACTCCATAC 59.455 44.444 0.00 0.00 0.00 2.39
3381 4857 7.502696 ACAGACTACTACTCCATACTAGACAG 58.497 42.308 0.00 0.00 0.00 3.51
3391 4867 7.448420 ACTCCATACTAGACAGCGTAACTATA 58.552 38.462 0.00 0.00 0.00 1.31
3461 4962 4.901868 TCCTTTTCAGGTTATTACGCTGT 58.098 39.130 0.00 0.00 41.69 4.40
3480 4987 5.050490 GCTGTTGTATGGTAGGAGTACATG 58.950 45.833 0.00 0.00 0.00 3.21
3564 5077 3.147629 GCAGCCGTCCTCTCTAGTATTA 58.852 50.000 0.00 0.00 0.00 0.98
3574 5087 5.886474 TCCTCTCTAGTATTATGTATGCCGG 59.114 44.000 0.00 0.00 0.00 6.13
3575 5088 5.652891 CCTCTCTAGTATTATGTATGCCGGT 59.347 44.000 1.90 0.00 0.00 5.28
3598 5111 0.179045 GTGGCCAAGAGTGTGTCTGT 60.179 55.000 7.24 0.00 34.84 3.41
3599 5112 0.106708 TGGCCAAGAGTGTGTCTGTC 59.893 55.000 0.61 0.00 34.84 3.51
3600 5113 0.394565 GGCCAAGAGTGTGTCTGTCT 59.605 55.000 0.00 0.00 34.84 3.41
3601 5114 1.506493 GCCAAGAGTGTGTCTGTCTG 58.494 55.000 0.00 0.00 34.84 3.51
3602 5115 1.069204 GCCAAGAGTGTGTCTGTCTGA 59.931 52.381 0.00 0.00 34.84 3.27
3645 5158 4.860352 TCGTGTGTAGTACATGTTGCATAC 59.140 41.667 2.30 4.57 44.84 2.39
3687 5200 1.598132 CATGCAGCAGCTGTCATCTAC 59.402 52.381 23.60 5.66 42.74 2.59
3688 5201 0.900421 TGCAGCAGCTGTCATCTACT 59.100 50.000 23.60 0.00 42.74 2.57
3689 5202 1.134877 TGCAGCAGCTGTCATCTACTC 60.135 52.381 23.60 4.20 42.74 2.59
3690 5203 1.805871 GCAGCAGCTGTCATCTACTCC 60.806 57.143 23.60 0.00 37.91 3.85
3691 5204 1.118838 AGCAGCTGTCATCTACTCCC 58.881 55.000 16.64 0.00 0.00 4.30
3692 5205 1.118838 GCAGCTGTCATCTACTCCCT 58.881 55.000 16.64 0.00 0.00 4.20
3693 5206 1.068434 GCAGCTGTCATCTACTCCCTC 59.932 57.143 16.64 0.00 0.00 4.30
3694 5207 1.686052 CAGCTGTCATCTACTCCCTCC 59.314 57.143 5.25 0.00 0.00 4.30
3695 5208 0.671251 GCTGTCATCTACTCCCTCCG 59.329 60.000 0.00 0.00 0.00 4.63
3696 5209 2.024825 GCTGTCATCTACTCCCTCCGT 61.025 57.143 0.00 0.00 0.00 4.69
3697 5210 2.379972 CTGTCATCTACTCCCTCCGTT 58.620 52.381 0.00 0.00 0.00 4.44
3698 5211 2.359531 CTGTCATCTACTCCCTCCGTTC 59.640 54.545 0.00 0.00 0.00 3.95
3699 5212 1.334243 GTCATCTACTCCCTCCGTTCG 59.666 57.143 0.00 0.00 0.00 3.95
3700 5213 0.669077 CATCTACTCCCTCCGTTCGG 59.331 60.000 4.74 4.74 0.00 4.30
3701 5214 0.549950 ATCTACTCCCTCCGTTCGGA 59.450 55.000 13.34 13.34 0.00 4.55
3702 5215 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
3703 5216 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
3704 5217 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
3705 5218 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3706 5219 1.755380 ACTCCCTCCGTTCGGAATTAG 59.245 52.381 14.79 13.09 33.41 1.73
3707 5220 2.029623 CTCCCTCCGTTCGGAATTAGA 58.970 52.381 14.79 8.24 33.41 2.10
3708 5221 2.628657 CTCCCTCCGTTCGGAATTAGAT 59.371 50.000 14.79 0.00 33.41 1.98
3709 5222 2.364324 TCCCTCCGTTCGGAATTAGATG 59.636 50.000 14.79 1.97 33.41 2.90
3710 5223 2.102588 CCCTCCGTTCGGAATTAGATGT 59.897 50.000 14.79 0.00 33.41 3.06
3711 5224 3.381949 CCTCCGTTCGGAATTAGATGTC 58.618 50.000 14.79 0.00 33.41 3.06
3712 5225 3.043586 CTCCGTTCGGAATTAGATGTCG 58.956 50.000 14.79 0.00 33.41 4.35
3713 5226 1.521423 CCGTTCGGAATTAGATGTCGC 59.479 52.381 5.19 0.00 0.00 5.19
3714 5227 1.187271 CGTTCGGAATTAGATGTCGCG 59.813 52.381 0.00 0.00 0.00 5.87
3715 5228 2.456989 GTTCGGAATTAGATGTCGCGA 58.543 47.619 3.71 3.71 0.00 5.87
3716 5229 2.115348 TCGGAATTAGATGTCGCGAC 57.885 50.000 31.66 31.66 0.00 5.19
3717 5230 1.674441 TCGGAATTAGATGTCGCGACT 59.326 47.619 36.27 23.28 0.00 4.18
3718 5231 1.781429 CGGAATTAGATGTCGCGACTG 59.219 52.381 36.27 11.18 0.00 3.51
3719 5232 1.523095 GGAATTAGATGTCGCGACTGC 59.477 52.381 36.27 27.27 37.91 4.40
3720 5233 2.464865 GAATTAGATGTCGCGACTGCT 58.535 47.619 36.27 31.54 39.65 4.24
3721 5234 1.845266 ATTAGATGTCGCGACTGCTG 58.155 50.000 36.27 0.00 39.65 4.41
3722 5235 0.526211 TTAGATGTCGCGACTGCTGT 59.474 50.000 36.27 22.14 39.65 4.40
3723 5236 1.375551 TAGATGTCGCGACTGCTGTA 58.624 50.000 36.27 21.21 39.65 2.74
3724 5237 0.179161 AGATGTCGCGACTGCTGTAC 60.179 55.000 36.27 19.51 39.65 2.90
3725 5238 0.456142 GATGTCGCGACTGCTGTACA 60.456 55.000 36.27 17.45 39.65 2.90
3726 5239 0.173481 ATGTCGCGACTGCTGTACAT 59.827 50.000 36.27 18.92 39.65 2.29
3727 5240 0.038618 TGTCGCGACTGCTGTACATT 60.039 50.000 36.27 0.00 39.65 2.71
3728 5241 1.200484 TGTCGCGACTGCTGTACATTA 59.800 47.619 36.27 11.91 39.65 1.90
3729 5242 2.159296 TGTCGCGACTGCTGTACATTAT 60.159 45.455 36.27 0.00 39.65 1.28
3730 5243 2.216488 GTCGCGACTGCTGTACATTATG 59.784 50.000 31.12 0.00 39.65 1.90
3731 5244 1.071239 CGCGACTGCTGTACATTATGC 60.071 52.381 0.00 0.00 39.65 3.14
3732 5245 1.933181 GCGACTGCTGTACATTATGCA 59.067 47.619 7.24 7.24 38.39 3.96
3733 5246 2.545526 GCGACTGCTGTACATTATGCAT 59.454 45.455 3.79 3.79 38.39 3.96
3734 5247 3.002656 GCGACTGCTGTACATTATGCATT 59.997 43.478 3.54 3.07 38.39 3.56
3735 5248 4.496341 GCGACTGCTGTACATTATGCATTT 60.496 41.667 3.54 0.00 38.39 2.32
3736 5249 5.572211 CGACTGCTGTACATTATGCATTTT 58.428 37.500 3.54 0.00 34.79 1.82
3737 5250 5.453266 CGACTGCTGTACATTATGCATTTTG 59.547 40.000 3.54 5.73 34.79 2.44
3738 5251 5.104374 ACTGCTGTACATTATGCATTTTGC 58.896 37.500 3.54 0.00 45.29 3.68
3754 5267 6.992766 GCATTTTGCAAACATGTCCTTATAC 58.007 36.000 23.26 9.97 44.26 1.47
3755 5268 6.813152 GCATTTTGCAAACATGTCCTTATACT 59.187 34.615 23.26 0.00 44.26 2.12
3756 5269 7.331687 GCATTTTGCAAACATGTCCTTATACTT 59.668 33.333 23.26 0.00 44.26 2.24
3757 5270 9.206870 CATTTTGCAAACATGTCCTTATACTTT 57.793 29.630 12.39 0.00 0.00 2.66
3758 5271 9.777297 ATTTTGCAAACATGTCCTTATACTTTT 57.223 25.926 12.39 0.00 0.00 2.27
3759 5272 8.586570 TTTGCAAACATGTCCTTATACTTTTG 57.413 30.769 8.05 0.00 0.00 2.44
3760 5273 7.517614 TGCAAACATGTCCTTATACTTTTGA 57.482 32.000 0.00 0.00 0.00 2.69
3761 5274 7.946207 TGCAAACATGTCCTTATACTTTTGAA 58.054 30.769 0.00 0.00 0.00 2.69
3762 5275 8.584157 TGCAAACATGTCCTTATACTTTTGAAT 58.416 29.630 0.00 0.00 0.00 2.57
3763 5276 9.076596 GCAAACATGTCCTTATACTTTTGAATC 57.923 33.333 0.00 0.00 0.00 2.52
3793 5306 3.471806 GCCCCCGTCTCCTTCCTC 61.472 72.222 0.00 0.00 0.00 3.71
3794 5307 2.038975 CCCCCGTCTCCTTCCTCA 59.961 66.667 0.00 0.00 0.00 3.86
3795 5308 2.359967 CCCCCGTCTCCTTCCTCAC 61.360 68.421 0.00 0.00 0.00 3.51
3796 5309 1.305381 CCCCGTCTCCTTCCTCACT 60.305 63.158 0.00 0.00 0.00 3.41
3797 5310 0.033405 CCCCGTCTCCTTCCTCACTA 60.033 60.000 0.00 0.00 0.00 2.74
3798 5311 1.104630 CCCGTCTCCTTCCTCACTAC 58.895 60.000 0.00 0.00 0.00 2.73
3799 5312 1.341187 CCCGTCTCCTTCCTCACTACT 60.341 57.143 0.00 0.00 0.00 2.57
3800 5313 2.018515 CCGTCTCCTTCCTCACTACTC 58.981 57.143 0.00 0.00 0.00 2.59
3801 5314 2.018515 CGTCTCCTTCCTCACTACTCC 58.981 57.143 0.00 0.00 0.00 3.85
3802 5315 2.618302 CGTCTCCTTCCTCACTACTCCA 60.618 54.545 0.00 0.00 0.00 3.86
3803 5316 2.756207 GTCTCCTTCCTCACTACTCCAC 59.244 54.545 0.00 0.00 0.00 4.02
3804 5317 2.104170 CTCCTTCCTCACTACTCCACC 58.896 57.143 0.00 0.00 0.00 4.61
3805 5318 0.818296 CCTTCCTCACTACTCCACCG 59.182 60.000 0.00 0.00 0.00 4.94
3806 5319 1.546961 CTTCCTCACTACTCCACCGT 58.453 55.000 0.00 0.00 0.00 4.83
3807 5320 1.473278 CTTCCTCACTACTCCACCGTC 59.527 57.143 0.00 0.00 0.00 4.79
3808 5321 0.675837 TCCTCACTACTCCACCGTCG 60.676 60.000 0.00 0.00 0.00 5.12
3809 5322 1.136984 CTCACTACTCCACCGTCGC 59.863 63.158 0.00 0.00 0.00 5.19
3810 5323 1.303074 TCACTACTCCACCGTCGCT 60.303 57.895 0.00 0.00 0.00 4.93
3811 5324 1.136984 CACTACTCCACCGTCGCTC 59.863 63.158 0.00 0.00 0.00 5.03
3812 5325 1.303074 ACTACTCCACCGTCGCTCA 60.303 57.895 0.00 0.00 0.00 4.26
3813 5326 1.136984 CTACTCCACCGTCGCTCAC 59.863 63.158 0.00 0.00 0.00 3.51
3840 5353 3.942439 GCTCCGGCCACTATCCCC 61.942 72.222 2.24 0.00 0.00 4.81
3841 5354 3.242291 CTCCGGCCACTATCCCCC 61.242 72.222 2.24 0.00 0.00 5.40
3844 5357 3.925090 CGGCCACTATCCCCCGTC 61.925 72.222 2.24 0.00 36.18 4.79
3845 5358 2.446036 GGCCACTATCCCCCGTCT 60.446 66.667 0.00 0.00 0.00 4.18
3846 5359 2.070650 GGCCACTATCCCCCGTCTT 61.071 63.158 0.00 0.00 0.00 3.01
3847 5360 1.446366 GCCACTATCCCCCGTCTTC 59.554 63.158 0.00 0.00 0.00 2.87
3848 5361 2.041206 GCCACTATCCCCCGTCTTCC 62.041 65.000 0.00 0.00 0.00 3.46
3849 5362 0.398664 CCACTATCCCCCGTCTTCCT 60.399 60.000 0.00 0.00 0.00 3.36
3850 5363 1.041437 CACTATCCCCCGTCTTCCTC 58.959 60.000 0.00 0.00 0.00 3.71
3851 5364 0.105607 ACTATCCCCCGTCTTCCTCC 60.106 60.000 0.00 0.00 0.00 4.30
3852 5365 0.832559 CTATCCCCCGTCTTCCTCCC 60.833 65.000 0.00 0.00 0.00 4.30
3853 5366 2.322252 TATCCCCCGTCTTCCTCCCC 62.322 65.000 0.00 0.00 0.00 4.81
3857 5370 3.001406 CCGTCTTCCTCCCCCGTT 61.001 66.667 0.00 0.00 0.00 4.44
3858 5371 2.577593 CGTCTTCCTCCCCCGTTC 59.422 66.667 0.00 0.00 0.00 3.95
3859 5372 1.982938 CGTCTTCCTCCCCCGTTCT 60.983 63.158 0.00 0.00 0.00 3.01
3860 5373 1.898885 GTCTTCCTCCCCCGTTCTC 59.101 63.158 0.00 0.00 0.00 2.87
3861 5374 1.305887 TCTTCCTCCCCCGTTCTCC 60.306 63.158 0.00 0.00 0.00 3.71
3862 5375 1.306226 CTTCCTCCCCCGTTCTCCT 60.306 63.158 0.00 0.00 0.00 3.69
3863 5376 1.305887 TTCCTCCCCCGTTCTCCTC 60.306 63.158 0.00 0.00 0.00 3.71
3864 5377 2.038975 CCTCCCCCGTTCTCCTCA 59.961 66.667 0.00 0.00 0.00 3.86
3865 5378 2.060980 CCTCCCCCGTTCTCCTCAG 61.061 68.421 0.00 0.00 0.00 3.35
3866 5379 2.683933 TCCCCCGTTCTCCTCAGC 60.684 66.667 0.00 0.00 0.00 4.26
3867 5380 3.003173 CCCCCGTTCTCCTCAGCA 61.003 66.667 0.00 0.00 0.00 4.41
3868 5381 2.266055 CCCCGTTCTCCTCAGCAC 59.734 66.667 0.00 0.00 0.00 4.40
3869 5382 2.266055 CCCGTTCTCCTCAGCACC 59.734 66.667 0.00 0.00 0.00 5.01
3870 5383 2.266055 CCGTTCTCCTCAGCACCC 59.734 66.667 0.00 0.00 0.00 4.61
3871 5384 2.583441 CCGTTCTCCTCAGCACCCA 61.583 63.158 0.00 0.00 0.00 4.51
3872 5385 1.079543 CGTTCTCCTCAGCACCCAG 60.080 63.158 0.00 0.00 0.00 4.45
3873 5386 1.536073 CGTTCTCCTCAGCACCCAGA 61.536 60.000 0.00 0.00 0.00 3.86
3874 5387 0.248843 GTTCTCCTCAGCACCCAGAG 59.751 60.000 0.00 0.00 0.00 3.35
3875 5388 0.115152 TTCTCCTCAGCACCCAGAGA 59.885 55.000 0.00 0.00 33.74 3.10
3876 5389 0.324183 TCTCCTCAGCACCCAGAGAG 60.324 60.000 0.00 0.00 33.74 3.20
3877 5390 0.324183 CTCCTCAGCACCCAGAGAGA 60.324 60.000 0.00 0.00 33.74 3.10
3878 5391 0.324183 TCCTCAGCACCCAGAGAGAG 60.324 60.000 0.00 0.00 33.74 3.20
3879 5392 0.614415 CCTCAGCACCCAGAGAGAGT 60.614 60.000 0.00 0.00 33.74 3.24
3880 5393 0.817013 CTCAGCACCCAGAGAGAGTC 59.183 60.000 0.00 0.00 33.74 3.36
3881 5394 0.407528 TCAGCACCCAGAGAGAGTCT 59.592 55.000 0.00 0.00 35.00 3.24
3882 5395 0.817013 CAGCACCCAGAGAGAGTCTC 59.183 60.000 12.54 12.54 43.70 3.36
3883 5396 0.324275 AGCACCCAGAGAGAGTCTCC 60.324 60.000 16.74 8.37 44.42 3.71
3884 5397 1.662438 GCACCCAGAGAGAGTCTCCG 61.662 65.000 16.74 5.75 44.42 4.63
3885 5398 1.379309 ACCCAGAGAGAGTCTCCGC 60.379 63.158 16.74 9.33 44.42 5.54
3886 5399 2.477176 CCCAGAGAGAGTCTCCGCG 61.477 68.421 16.74 0.00 44.42 6.46
3887 5400 2.407210 CAGAGAGAGTCTCCGCGC 59.593 66.667 16.74 0.00 44.42 6.86
3888 5401 3.199190 AGAGAGAGTCTCCGCGCG 61.199 66.667 25.67 25.67 44.42 6.86
3889 5402 3.501548 GAGAGAGTCTCCGCGCGT 61.502 66.667 29.95 9.79 37.55 6.01
3890 5403 3.443261 GAGAGAGTCTCCGCGCGTC 62.443 68.421 29.95 19.02 37.55 5.19
3891 5404 4.872485 GAGAGTCTCCGCGCGTCG 62.872 72.222 29.95 18.79 38.08 5.12
3904 5417 4.436998 CGTCGCAGGACCCAGGAC 62.437 72.222 0.00 0.00 40.17 3.85
3905 5418 4.083862 GTCGCAGGACCCAGGACC 62.084 72.222 0.00 0.00 37.19 4.46
3908 5421 3.721706 GCAGGACCCAGGACCCAG 61.722 72.222 1.30 0.00 0.00 4.45
3909 5422 3.721706 CAGGACCCAGGACCCAGC 61.722 72.222 1.30 0.00 0.00 4.85
3930 5443 3.371021 CTGTGCAGGAGACGACCT 58.629 61.111 0.00 0.00 41.43 3.85
3949 5462 4.517703 CGTCGTCGCGGAGGAGAC 62.518 72.222 6.13 8.16 39.31 3.36
3958 5471 4.500116 GGAGGAGACGCGCAGGAC 62.500 72.222 5.73 0.00 0.00 3.85
3959 5472 4.500116 GAGGAGACGCGCAGGACC 62.500 72.222 5.73 5.32 0.00 4.46
3961 5474 4.070552 GGAGACGCGCAGGACCTT 62.071 66.667 5.73 0.00 0.00 3.50
3962 5475 2.507324 GAGACGCGCAGGACCTTC 60.507 66.667 5.73 0.00 0.00 3.46
3963 5476 3.282745 GAGACGCGCAGGACCTTCA 62.283 63.158 5.73 0.00 0.00 3.02
3964 5477 3.112709 GACGCGCAGGACCTTCAC 61.113 66.667 5.73 0.00 0.00 3.18
3967 5480 4.373116 GCGCAGGACCTTCACGGA 62.373 66.667 0.30 0.00 36.31 4.69
3968 5481 2.125912 CGCAGGACCTTCACGGAG 60.126 66.667 0.00 0.00 36.31 4.63
3969 5482 2.266055 GCAGGACCTTCACGGAGG 59.734 66.667 0.00 0.00 42.75 4.30
3970 5483 2.266055 CAGGACCTTCACGGAGGC 59.734 66.667 0.00 0.00 40.65 4.70
3971 5484 3.382832 AGGACCTTCACGGAGGCG 61.383 66.667 0.00 0.00 40.65 5.52
3975 5488 4.394712 CCTTCACGGAGGCGCCTT 62.395 66.667 33.34 12.89 33.16 4.35
3976 5489 3.121030 CTTCACGGAGGCGCCTTG 61.121 66.667 33.34 27.56 37.26 3.61
4023 5536 4.468689 GGTGTGCCCTCGCCTACC 62.469 72.222 0.00 0.00 35.37 3.18
4024 5537 3.391382 GTGTGCCCTCGCCTACCT 61.391 66.667 0.00 0.00 0.00 3.08
4025 5538 3.390521 TGTGCCCTCGCCTACCTG 61.391 66.667 0.00 0.00 0.00 4.00
4026 5539 3.075005 GTGCCCTCGCCTACCTGA 61.075 66.667 0.00 0.00 0.00 3.86
4027 5540 2.759973 TGCCCTCGCCTACCTGAG 60.760 66.667 0.00 0.00 0.00 3.35
4028 5541 4.228567 GCCCTCGCCTACCTGAGC 62.229 72.222 0.00 0.00 0.00 4.26
4029 5542 2.759973 CCCTCGCCTACCTGAGCA 60.760 66.667 0.00 0.00 0.00 4.26
4030 5543 2.790791 CCCTCGCCTACCTGAGCAG 61.791 68.421 0.00 0.00 0.00 4.24
4031 5544 2.105930 CTCGCCTACCTGAGCAGC 59.894 66.667 0.00 0.00 0.00 5.25
4033 5546 4.880537 CGCCTACCTGAGCAGCGG 62.881 72.222 0.00 0.00 42.93 5.52
4035 5548 2.759973 CCTACCTGAGCAGCGGGA 60.760 66.667 11.04 0.00 46.81 5.14
4036 5549 2.136878 CCTACCTGAGCAGCGGGAT 61.137 63.158 11.04 0.00 46.81 3.85
4037 5550 1.690219 CCTACCTGAGCAGCGGGATT 61.690 60.000 11.04 0.00 46.81 3.01
4038 5551 0.531532 CTACCTGAGCAGCGGGATTG 60.532 60.000 11.04 0.00 46.81 2.67
4039 5552 2.593468 TACCTGAGCAGCGGGATTGC 62.593 60.000 11.04 0.00 46.81 3.56
4044 5557 2.505982 GCAGCGGGATTGCTCCTA 59.494 61.111 0.00 0.00 45.23 2.94
4045 5558 1.153168 GCAGCGGGATTGCTCCTAA 60.153 57.895 0.00 0.00 45.23 2.69
4046 5559 0.748005 GCAGCGGGATTGCTCCTAAA 60.748 55.000 0.00 0.00 45.23 1.85
4047 5560 1.303309 CAGCGGGATTGCTCCTAAAG 58.697 55.000 0.00 0.00 45.23 1.85
4048 5561 0.912486 AGCGGGATTGCTCCTAAAGT 59.088 50.000 0.00 0.00 42.95 2.66
4049 5562 1.282157 AGCGGGATTGCTCCTAAAGTT 59.718 47.619 0.00 0.00 42.95 2.66
4050 5563 1.671328 GCGGGATTGCTCCTAAAGTTC 59.329 52.381 0.00 0.00 41.74 3.01
4051 5564 2.681097 GCGGGATTGCTCCTAAAGTTCT 60.681 50.000 0.00 0.00 41.74 3.01
4052 5565 3.610911 CGGGATTGCTCCTAAAGTTCTT 58.389 45.455 0.00 0.00 41.74 2.52
4053 5566 3.623510 CGGGATTGCTCCTAAAGTTCTTC 59.376 47.826 0.00 0.00 41.74 2.87
4054 5567 3.948473 GGGATTGCTCCTAAAGTTCTTCC 59.052 47.826 0.00 0.00 41.74 3.46
4055 5568 4.324641 GGGATTGCTCCTAAAGTTCTTCCT 60.325 45.833 0.00 0.00 41.74 3.36
4056 5569 4.878971 GGATTGCTCCTAAAGTTCTTCCTC 59.121 45.833 0.00 0.00 38.65 3.71
4057 5570 5.338789 GGATTGCTCCTAAAGTTCTTCCTCT 60.339 44.000 0.00 0.00 38.65 3.69
4058 5571 5.568620 TTGCTCCTAAAGTTCTTCCTCTT 57.431 39.130 0.00 0.00 0.00 2.85
4059 5572 5.153950 TGCTCCTAAAGTTCTTCCTCTTC 57.846 43.478 0.00 0.00 0.00 2.87
4060 5573 4.177783 GCTCCTAAAGTTCTTCCTCTTCG 58.822 47.826 0.00 0.00 0.00 3.79
4061 5574 4.322123 GCTCCTAAAGTTCTTCCTCTTCGT 60.322 45.833 0.00 0.00 0.00 3.85
4062 5575 5.388408 TCCTAAAGTTCTTCCTCTTCGTC 57.612 43.478 0.00 0.00 0.00 4.20
4063 5576 4.831155 TCCTAAAGTTCTTCCTCTTCGTCA 59.169 41.667 0.00 0.00 0.00 4.35
4064 5577 4.924462 CCTAAAGTTCTTCCTCTTCGTCAC 59.076 45.833 0.00 0.00 0.00 3.67
4065 5578 3.388345 AAGTTCTTCCTCTTCGTCACC 57.612 47.619 0.00 0.00 0.00 4.02
4066 5579 2.599677 AGTTCTTCCTCTTCGTCACCT 58.400 47.619 0.00 0.00 0.00 4.00
4067 5580 2.559231 AGTTCTTCCTCTTCGTCACCTC 59.441 50.000 0.00 0.00 0.00 3.85
4068 5581 1.546961 TCTTCCTCTTCGTCACCTCC 58.453 55.000 0.00 0.00 0.00 4.30
4069 5582 0.533032 CTTCCTCTTCGTCACCTCCC 59.467 60.000 0.00 0.00 0.00 4.30
4070 5583 0.114560 TTCCTCTTCGTCACCTCCCT 59.885 55.000 0.00 0.00 0.00 4.20
4071 5584 0.323542 TCCTCTTCGTCACCTCCCTC 60.324 60.000 0.00 0.00 0.00 4.30
4072 5585 0.323908 CCTCTTCGTCACCTCCCTCT 60.324 60.000 0.00 0.00 0.00 3.69
4073 5586 0.814457 CTCTTCGTCACCTCCCTCTG 59.186 60.000 0.00 0.00 0.00 3.35
4074 5587 0.404426 TCTTCGTCACCTCCCTCTGA 59.596 55.000 0.00 0.00 0.00 3.27
4075 5588 1.203013 TCTTCGTCACCTCCCTCTGAA 60.203 52.381 0.00 0.00 0.00 3.02
4076 5589 1.827969 CTTCGTCACCTCCCTCTGAAT 59.172 52.381 0.00 0.00 0.00 2.57
4077 5590 1.475403 TCGTCACCTCCCTCTGAATC 58.525 55.000 0.00 0.00 0.00 2.52
4078 5591 0.101399 CGTCACCTCCCTCTGAATCG 59.899 60.000 0.00 0.00 0.00 3.34
4079 5592 1.187087 GTCACCTCCCTCTGAATCGT 58.813 55.000 0.00 0.00 0.00 3.73
4080 5593 1.134965 GTCACCTCCCTCTGAATCGTG 60.135 57.143 0.00 0.00 0.00 4.35
4081 5594 0.460987 CACCTCCCTCTGAATCGTGC 60.461 60.000 0.00 0.00 0.00 5.34
4082 5595 1.144936 CCTCCCTCTGAATCGTGCC 59.855 63.158 0.00 0.00 0.00 5.01
4083 5596 1.617018 CCTCCCTCTGAATCGTGCCA 61.617 60.000 0.00 0.00 0.00 4.92
4084 5597 0.250234 CTCCCTCTGAATCGTGCCAA 59.750 55.000 0.00 0.00 0.00 4.52
4085 5598 0.250234 TCCCTCTGAATCGTGCCAAG 59.750 55.000 0.00 0.00 0.00 3.61
4086 5599 0.250234 CCCTCTGAATCGTGCCAAGA 59.750 55.000 0.00 0.00 0.00 3.02
4087 5600 1.339055 CCCTCTGAATCGTGCCAAGAA 60.339 52.381 0.00 0.00 0.00 2.52
4088 5601 2.005451 CCTCTGAATCGTGCCAAGAAG 58.995 52.381 0.00 0.00 0.00 2.85
4089 5602 1.396301 CTCTGAATCGTGCCAAGAAGC 59.604 52.381 0.00 0.00 0.00 3.86
4090 5603 1.159285 CTGAATCGTGCCAAGAAGCA 58.841 50.000 0.00 0.00 41.46 3.91
4091 5604 1.129998 CTGAATCGTGCCAAGAAGCAG 59.870 52.381 0.00 0.44 45.14 4.24
4092 5605 1.160137 GAATCGTGCCAAGAAGCAGT 58.840 50.000 0.00 0.00 45.14 4.40
4093 5606 2.289382 TGAATCGTGCCAAGAAGCAGTA 60.289 45.455 0.00 0.00 45.14 2.74
4094 5607 2.472695 ATCGTGCCAAGAAGCAGTAA 57.527 45.000 0.00 0.00 45.14 2.24
4095 5608 2.248280 TCGTGCCAAGAAGCAGTAAA 57.752 45.000 0.00 0.00 45.14 2.01
4096 5609 2.778299 TCGTGCCAAGAAGCAGTAAAT 58.222 42.857 0.00 0.00 45.14 1.40
4097 5610 2.742053 TCGTGCCAAGAAGCAGTAAATC 59.258 45.455 0.00 0.00 45.14 2.17
4098 5611 2.474526 CGTGCCAAGAAGCAGTAAATCG 60.475 50.000 0.00 0.00 45.14 3.34
4099 5612 2.742053 GTGCCAAGAAGCAGTAAATCGA 59.258 45.455 0.00 0.00 45.14 3.59
4100 5613 2.742053 TGCCAAGAAGCAGTAAATCGAC 59.258 45.455 0.00 0.00 38.00 4.20
4101 5614 2.222819 GCCAAGAAGCAGTAAATCGACG 60.223 50.000 0.00 0.00 0.00 5.12
4102 5615 3.250744 CCAAGAAGCAGTAAATCGACGA 58.749 45.455 0.00 0.00 0.00 4.20
4103 5616 3.060895 CCAAGAAGCAGTAAATCGACGAC 59.939 47.826 0.00 0.00 0.00 4.34
4104 5617 3.851976 AGAAGCAGTAAATCGACGACT 57.148 42.857 0.00 0.00 0.00 4.18
4105 5618 4.959596 AGAAGCAGTAAATCGACGACTA 57.040 40.909 0.00 0.00 0.00 2.59
4106 5619 4.911053 AGAAGCAGTAAATCGACGACTAG 58.089 43.478 0.00 0.00 0.00 2.57
4107 5620 3.694535 AGCAGTAAATCGACGACTAGG 57.305 47.619 0.00 0.00 0.00 3.02
4108 5621 3.015327 AGCAGTAAATCGACGACTAGGT 58.985 45.455 0.00 0.00 0.00 3.08
4109 5622 3.065095 AGCAGTAAATCGACGACTAGGTC 59.935 47.826 0.00 0.00 0.00 3.85
4110 5623 3.791455 GCAGTAAATCGACGACTAGGTCC 60.791 52.174 0.00 0.00 33.30 4.46
4111 5624 3.626670 CAGTAAATCGACGACTAGGTCCT 59.373 47.826 0.00 0.00 33.30 3.85
4112 5625 3.876320 AGTAAATCGACGACTAGGTCCTC 59.124 47.826 0.00 0.00 33.30 3.71
4113 5626 1.297664 AATCGACGACTAGGTCCTCG 58.702 55.000 0.00 10.94 40.47 4.63
4114 5627 0.463204 ATCGACGACTAGGTCCTCGA 59.537 55.000 18.19 18.19 46.96 4.04
4115 5628 0.463204 TCGACGACTAGGTCCTCGAT 59.537 55.000 14.20 0.00 41.96 3.59
4116 5629 1.134580 TCGACGACTAGGTCCTCGATT 60.135 52.381 14.20 0.00 41.96 3.34
4117 5630 1.669779 CGACGACTAGGTCCTCGATTT 59.330 52.381 7.40 0.00 41.17 2.17
4118 5631 2.539142 CGACGACTAGGTCCTCGATTTG 60.539 54.545 7.40 0.00 41.17 2.32
4119 5632 1.749634 ACGACTAGGTCCTCGATTTGG 59.250 52.381 7.40 0.00 33.96 3.28
4120 5633 1.749634 CGACTAGGTCCTCGATTTGGT 59.250 52.381 0.00 0.00 31.24 3.67
4121 5634 2.223525 CGACTAGGTCCTCGATTTGGTC 60.224 54.545 0.00 0.00 31.24 4.02
4122 5635 2.101082 GACTAGGTCCTCGATTTGGTCC 59.899 54.545 0.00 0.00 33.85 4.46
4123 5636 1.067212 CTAGGTCCTCGATTTGGTCCG 59.933 57.143 0.00 0.00 37.74 4.79
4124 5637 1.814169 GGTCCTCGATTTGGTCCGC 60.814 63.158 0.00 0.00 0.00 5.54
4125 5638 1.814169 GTCCTCGATTTGGTCCGCC 60.814 63.158 0.00 0.00 0.00 6.13
4126 5639 1.987855 TCCTCGATTTGGTCCGCCT 60.988 57.895 0.00 0.00 35.27 5.52
4127 5640 1.078426 CCTCGATTTGGTCCGCCTT 60.078 57.895 0.00 0.00 35.27 4.35
4128 5641 1.369091 CCTCGATTTGGTCCGCCTTG 61.369 60.000 0.00 0.00 35.27 3.61
4129 5642 1.369091 CTCGATTTGGTCCGCCTTGG 61.369 60.000 0.00 0.00 40.09 3.61
4130 5643 2.885113 GATTTGGTCCGCCTTGGC 59.115 61.111 0.75 0.75 37.80 4.52
4131 5644 2.679996 ATTTGGTCCGCCTTGGCC 60.680 61.111 6.02 0.00 37.80 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.666715 CTTGCCTGTGTTGTGCCACG 62.667 60.000 0.00 0.00 38.20 4.94
50 51 3.042682 TCTTTGGAGGTCACAAGTGGTA 58.957 45.455 0.00 0.00 0.00 3.25
56 59 3.924114 TCACTTCTTTGGAGGTCACAA 57.076 42.857 0.00 0.00 28.99 3.33
61 64 3.288092 GTGGTTTCACTTCTTTGGAGGT 58.712 45.455 0.00 0.00 40.58 3.85
134 144 2.033755 CGACTGACCTCGAGGACGT 61.034 63.158 37.69 28.81 40.69 4.34
152 162 0.681243 AAGAAAGATTGCCGGGAGCC 60.681 55.000 2.18 0.00 42.71 4.70
179 201 3.334583 ACTCAAGAGCGCCAGAAAATA 57.665 42.857 2.29 0.00 0.00 1.40
180 202 2.191128 ACTCAAGAGCGCCAGAAAAT 57.809 45.000 2.29 0.00 0.00 1.82
207 229 7.883229 ACGATCATCCAAAACCAAAAATTAC 57.117 32.000 0.00 0.00 0.00 1.89
208 230 9.796120 GATACGATCATCCAAAACCAAAAATTA 57.204 29.630 0.00 0.00 0.00 1.40
209 231 8.531146 AGATACGATCATCCAAAACCAAAAATT 58.469 29.630 0.00 0.00 0.00 1.82
210 232 7.975616 CAGATACGATCATCCAAAACCAAAAAT 59.024 33.333 0.00 0.00 0.00 1.82
211 233 7.040062 ACAGATACGATCATCCAAAACCAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
215 237 4.875536 CACAGATACGATCATCCAAAACCA 59.124 41.667 0.00 0.00 0.00 3.67
340 372 0.535335 TGCTACGTTCCATGTCCCTC 59.465 55.000 0.00 0.00 0.00 4.30
344 376 1.328680 CAGCATGCTACGTTCCATGTC 59.671 52.381 22.19 16.05 40.63 3.06
498 534 9.447157 CAGAAACAGAGGAATCTTCTTTCTATT 57.553 33.333 8.41 0.00 0.00 1.73
544 612 2.490903 CCATTGAGCTGAAAGAACAGGG 59.509 50.000 0.00 0.00 38.22 4.45
615 683 3.418684 TTAAGAAAGGGAGGTCAGTGC 57.581 47.619 0.00 0.00 0.00 4.40
616 684 6.062095 TCTTTTTAAGAAAGGGAGGTCAGTG 58.938 40.000 9.02 0.00 33.83 3.66
672 741 9.621629 TTTGGTTGAGATCTCTTTTACACTTAA 57.378 29.630 22.95 2.73 0.00 1.85
684 753 5.163499 ACGAGTAGGATTTGGTTGAGATCTC 60.163 44.000 16.21 16.21 0.00 2.75
694 764 3.868757 TGACTGACGAGTAGGATTTGG 57.131 47.619 0.00 0.00 30.16 3.28
798 876 1.268335 GCAACGCGGAAACAGAAAAGA 60.268 47.619 12.47 0.00 0.00 2.52
980 1075 1.267121 GGTGAACTCCTGGCAGTAGA 58.733 55.000 14.55 3.64 0.00 2.59
1014 1109 0.605589 CCTCAGTTCCTGCTTCGTCT 59.394 55.000 0.00 0.00 0.00 4.18
1025 1120 0.676151 CAAGGGCTGCTCCTCAGTTC 60.676 60.000 9.63 0.00 44.66 3.01
1031 1126 3.334054 GGTCCAAGGGCTGCTCCT 61.334 66.667 0.00 0.00 39.17 3.69
1042 1137 1.976474 GCAATGGCTTCGGGTCCAA 60.976 57.895 0.00 0.00 35.75 3.53
1068 1163 2.499685 GTAGGGAACATCGGCGCT 59.500 61.111 7.64 0.00 0.00 5.92
1092 1187 3.475566 GCAGTTGCTAGATCATACCCA 57.524 47.619 0.00 0.00 38.21 4.51
1109 1204 1.070445 GGGTCGGATGATCCAGCAG 59.930 63.158 12.67 0.00 45.47 4.24
1110 1205 3.230284 GGGTCGGATGATCCAGCA 58.770 61.111 12.67 0.00 45.47 4.41
1114 1209 0.474184 AATGGTGGGTCGGATGATCC 59.526 55.000 0.08 0.08 46.43 3.36
1115 1210 1.417890 AGAATGGTGGGTCGGATGATC 59.582 52.381 0.00 0.00 0.00 2.92
1116 1211 1.511613 AGAATGGTGGGTCGGATGAT 58.488 50.000 0.00 0.00 0.00 2.45
1117 1212 1.209504 GAAGAATGGTGGGTCGGATGA 59.790 52.381 0.00 0.00 0.00 2.92
1118 1213 1.210478 AGAAGAATGGTGGGTCGGATG 59.790 52.381 0.00 0.00 0.00 3.51
1141 1236 4.687018 GTGTTGTCGTATTGGTGTGATGTA 59.313 41.667 0.00 0.00 0.00 2.29
1142 1237 3.496884 GTGTTGTCGTATTGGTGTGATGT 59.503 43.478 0.00 0.00 0.00 3.06
1143 1238 3.120338 GGTGTTGTCGTATTGGTGTGATG 60.120 47.826 0.00 0.00 0.00 3.07
1179 1274 2.345760 CGGCCCAGCAAATGAAGCT 61.346 57.895 0.00 0.00 44.62 3.74
1180 1275 2.182537 CGGCCCAGCAAATGAAGC 59.817 61.111 0.00 0.00 0.00 3.86
1181 1276 2.182537 GCGGCCCAGCAAATGAAG 59.817 61.111 0.00 0.00 37.05 3.02
1182 1277 3.381136 GGCGGCCCAGCAAATGAA 61.381 61.111 8.12 0.00 39.27 2.57
1202 1297 4.106925 GTGAGGAGCAGGGCCCTG 62.107 72.222 42.66 42.66 46.15 4.45
1207 1302 4.020617 TTGCGGTGAGGAGCAGGG 62.021 66.667 0.00 0.00 44.72 4.45
1208 1303 2.743928 GTTGCGGTGAGGAGCAGG 60.744 66.667 0.00 0.00 44.72 4.85
1209 1304 1.597854 TTGTTGCGGTGAGGAGCAG 60.598 57.895 0.00 0.00 44.72 4.24
1210 1305 1.891919 GTTGTTGCGGTGAGGAGCA 60.892 57.895 0.00 0.00 42.15 4.26
1211 1306 1.891919 TGTTGTTGCGGTGAGGAGC 60.892 57.895 0.00 0.00 0.00 4.70
1212 1307 1.507141 GGTGTTGTTGCGGTGAGGAG 61.507 60.000 0.00 0.00 0.00 3.69
1213 1308 1.525077 GGTGTTGTTGCGGTGAGGA 60.525 57.895 0.00 0.00 0.00 3.71
1214 1309 2.551912 GGGTGTTGTTGCGGTGAGG 61.552 63.158 0.00 0.00 0.00 3.86
1215 1310 1.525995 AGGGTGTTGTTGCGGTGAG 60.526 57.895 0.00 0.00 0.00 3.51
1216 1311 1.821759 CAGGGTGTTGTTGCGGTGA 60.822 57.895 0.00 0.00 0.00 4.02
1217 1312 2.721231 CAGGGTGTTGTTGCGGTG 59.279 61.111 0.00 0.00 0.00 4.94
1218 1313 2.518349 CCAGGGTGTTGTTGCGGT 60.518 61.111 0.00 0.00 0.00 5.68
1219 1314 3.294493 CCCAGGGTGTTGTTGCGG 61.294 66.667 0.00 0.00 0.00 5.69
1220 1315 3.977244 GCCCAGGGTGTTGTTGCG 61.977 66.667 7.55 0.00 0.00 4.85
1221 1316 3.615709 GGCCCAGGGTGTTGTTGC 61.616 66.667 7.55 0.00 0.00 4.17
1222 1317 3.294493 CGGCCCAGGGTGTTGTTG 61.294 66.667 7.55 0.00 0.00 3.33
1223 1318 4.596585 CCGGCCCAGGGTGTTGTT 62.597 66.667 7.55 0.00 0.00 2.83
1237 1332 1.805254 CAAATGAAGCTGGAGCCGG 59.195 57.895 0.00 0.00 43.38 6.13
1238 1333 1.138247 GCAAATGAAGCTGGAGCCG 59.862 57.895 0.00 0.00 43.38 5.52
1239 1334 2.576298 AGCAAATGAAGCTGGAGCC 58.424 52.632 0.00 0.00 41.61 4.70
1269 1364 3.615709 GGCCCAGGGTGTTGTTGC 61.616 66.667 7.55 0.00 0.00 4.17
1272 1367 4.603535 GCTGGCCCAGGGTGTTGT 62.604 66.667 13.78 0.00 31.21 3.32
1320 1415 3.637273 GGAACTGCGGACCCTGGT 61.637 66.667 0.00 0.00 0.00 4.00
1458 1553 1.672356 CCGAACCCTCTTGGCTGTG 60.672 63.158 0.00 0.00 37.83 3.66
1561 1656 2.046285 CCCTTGGGTTGTCCGATGC 61.046 63.158 0.00 0.00 38.76 3.91
1584 1679 2.045926 GCCATGGTCGCTTCCACT 60.046 61.111 14.67 0.00 40.51 4.00
1844 1939 4.323477 CGTCCCTCCCGGCAACAA 62.323 66.667 0.00 0.00 0.00 2.83
1846 1941 4.452733 CTCGTCCCTCCCGGCAAC 62.453 72.222 0.00 0.00 0.00 4.17
1908 2003 0.895530 GGGTGTCGGTCTCATCTTCA 59.104 55.000 0.00 0.00 0.00 3.02
2061 2156 2.108970 GTGATAGAGAAAGGGTCCCGT 58.891 52.381 0.99 0.00 0.00 5.28
2076 2171 2.584835 AAACCTTGCCTGCTGTGATA 57.415 45.000 0.00 0.00 0.00 2.15
2109 2204 1.604755 GAGTCCTCGATGCGATACACT 59.395 52.381 0.00 0.00 34.61 3.55
2160 2255 2.224281 CCTCAGCCTGTACTTGAACACA 60.224 50.000 0.00 0.00 0.00 3.72
2190 2285 2.225343 TGAAATTCCATGAGGTTGCCCT 60.225 45.455 0.00 0.00 46.66 5.19
2196 2291 3.588842 TCCAGACTGAAATTCCATGAGGT 59.411 43.478 3.32 0.00 35.89 3.85
2200 2295 5.884232 TCATCTTCCAGACTGAAATTCCATG 59.116 40.000 3.32 0.00 0.00 3.66
2202 2297 5.221904 TGTCATCTTCCAGACTGAAATTCCA 60.222 40.000 3.32 0.00 35.81 3.53
2206 2301 5.752036 TCTGTCATCTTCCAGACTGAAAT 57.248 39.130 3.32 0.00 38.98 2.17
2229 2324 0.744281 CACGGTTTGCCTTCCACTTT 59.256 50.000 0.00 0.00 0.00 2.66
2241 2336 1.757682 TTTCTCTTGTGGCACGGTTT 58.242 45.000 13.77 0.00 0.00 3.27
2399 2494 0.892358 CTCACAGTGGTGCAATGGCT 60.892 55.000 0.00 0.00 44.87 4.75
2466 2561 0.811616 GAAGATCGCCGCCATTCTGT 60.812 55.000 0.00 0.00 0.00 3.41
2556 2651 0.105964 TGTTCCGACAGTCCTTGGTG 59.894 55.000 0.00 0.00 0.00 4.17
2571 2666 1.517242 CTCTCTGTGCAACCCTGTTC 58.483 55.000 0.00 0.00 34.36 3.18
2688 2783 0.320683 CGTCCATGACTTGACCAGCA 60.321 55.000 0.00 0.00 0.00 4.41
2691 2786 2.489971 GTTTCGTCCATGACTTGACCA 58.510 47.619 0.00 0.00 0.00 4.02
2731 2826 1.836802 AAGGTGTACTCGTCCTCCTC 58.163 55.000 0.00 0.00 0.00 3.71
2899 2997 0.464554 GGGGAGCAGCTATGGTTGAC 60.465 60.000 0.00 0.00 37.25 3.18
2988 3086 7.955750 TCAGTCATAGGAGGGATATGTTTCATA 59.044 37.037 0.00 0.00 33.29 2.15
3006 3104 8.255905 CCATAATCATATGTCAGCTCAGTCATA 58.744 37.037 1.90 0.00 37.75 2.15
3089 3187 2.860009 CAGATCCACATAAGCATGGCT 58.140 47.619 0.00 0.00 42.56 4.75
3162 3260 8.954350 AGGAACAGAGATAATGACATTTTTCTG 58.046 33.333 22.00 22.00 37.43 3.02
3164 3262 9.780413 GAAGGAACAGAGATAATGACATTTTTC 57.220 33.333 5.89 4.55 0.00 2.29
3167 3265 9.829507 CTAGAAGGAACAGAGATAATGACATTT 57.170 33.333 5.89 0.00 0.00 2.32
3168 3266 8.428063 CCTAGAAGGAACAGAGATAATGACATT 58.572 37.037 5.87 5.87 37.67 2.71
3219 3337 1.719529 TTGGAACGGAGGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
3221 3339 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
3222 3340 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
3223 3341 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
3224 3342 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3225 3343 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3227 3345 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3228 3346 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3229 3347 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
3230 3348 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
3231 3349 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
3232 3350 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
3233 3351 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
3235 3353 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
3239 3357 9.862371 CACTAGTACAAAGTTGAGTCATCTATT 57.138 33.333 4.14 0.00 0.00 1.73
3241 3359 8.405418 ACACTAGTACAAAGTTGAGTCATCTA 57.595 34.615 4.14 0.00 0.00 1.98
3242 3360 7.231722 AGACACTAGTACAAAGTTGAGTCATCT 59.768 37.037 14.39 0.00 0.00 2.90
3243 3361 7.371936 AGACACTAGTACAAAGTTGAGTCATC 58.628 38.462 14.39 0.00 0.00 2.92
3244 3362 7.291411 AGACACTAGTACAAAGTTGAGTCAT 57.709 36.000 14.39 0.00 0.00 3.06
3245 3363 6.710597 AGACACTAGTACAAAGTTGAGTCA 57.289 37.500 14.39 0.00 0.00 3.41
3246 3364 6.979238 ACAAGACACTAGTACAAAGTTGAGTC 59.021 38.462 0.00 2.96 0.00 3.36
3247 3365 6.875076 ACAAGACACTAGTACAAAGTTGAGT 58.125 36.000 0.00 0.00 0.00 3.41
3248 3366 6.978659 TGACAAGACACTAGTACAAAGTTGAG 59.021 38.462 0.00 0.00 0.00 3.02
3249 3367 6.755141 GTGACAAGACACTAGTACAAAGTTGA 59.245 38.462 0.00 0.00 37.73 3.18
3250 3368 6.533723 TGTGACAAGACACTAGTACAAAGTTG 59.466 38.462 0.00 0.00 40.87 3.16
3251 3369 6.534079 GTGTGACAAGACACTAGTACAAAGTT 59.466 38.462 0.00 0.00 42.58 2.66
3252 3370 6.040878 GTGTGACAAGACACTAGTACAAAGT 58.959 40.000 0.00 0.00 42.58 2.66
3253 3371 5.173312 CGTGTGACAAGACACTAGTACAAAG 59.827 44.000 0.00 0.00 43.51 2.77
3254 3372 5.038683 CGTGTGACAAGACACTAGTACAAA 58.961 41.667 0.00 0.00 43.51 2.83
3255 3373 4.498513 CCGTGTGACAAGACACTAGTACAA 60.499 45.833 0.00 0.00 43.51 2.41
3256 3374 3.004002 CCGTGTGACAAGACACTAGTACA 59.996 47.826 0.00 0.00 43.51 2.90
3257 3375 3.004106 ACCGTGTGACAAGACACTAGTAC 59.996 47.826 0.00 0.00 43.51 2.73
3258 3376 3.216800 ACCGTGTGACAAGACACTAGTA 58.783 45.455 0.00 0.00 43.51 1.82
3259 3377 2.029623 ACCGTGTGACAAGACACTAGT 58.970 47.619 0.00 0.00 43.51 2.57
3260 3378 2.795175 ACCGTGTGACAAGACACTAG 57.205 50.000 0.00 0.00 43.51 2.57
3261 3379 3.570975 ACATACCGTGTGACAAGACACTA 59.429 43.478 0.00 0.00 43.51 2.74
3262 3380 2.364324 ACATACCGTGTGACAAGACACT 59.636 45.455 0.00 0.00 43.51 3.55
3267 3385 4.926832 TGACAATACATACCGTGTGACAAG 59.073 41.667 1.81 0.00 42.24 3.16
3328 3446 5.140747 ACGTTCTTCTCTAGCAAAGACAT 57.859 39.130 6.23 0.00 31.46 3.06
3359 3477 5.406175 CGCTGTCTAGTATGGAGTAGTAGTC 59.594 48.000 0.00 0.00 37.52 2.59
3374 4850 6.427242 TGGAGACATATAGTTACGCTGTCTAG 59.573 42.308 10.38 0.00 44.79 2.43
3381 4857 6.363626 CACAGATTGGAGACATATAGTTACGC 59.636 42.308 0.00 0.00 42.32 4.42
3391 4867 2.719739 CAAGGCACAGATTGGAGACAT 58.280 47.619 0.00 0.00 42.32 3.06
3461 4962 4.407621 CCACCATGTACTCCTACCATACAA 59.592 45.833 0.00 0.00 32.80 2.41
3564 5077 1.077787 CCACCACACCGGCATACAT 60.078 57.895 0.00 0.00 39.03 2.29
3574 5087 1.152963 ACACTCTTGGCCACCACAC 60.153 57.895 3.88 0.00 30.78 3.82
3575 5088 1.152984 CACACTCTTGGCCACCACA 60.153 57.895 3.88 0.00 30.78 4.17
3598 5111 2.516906 TGCATCACAAAAGCCATCAGA 58.483 42.857 0.00 0.00 0.00 3.27
3599 5112 3.306917 TTGCATCACAAAAGCCATCAG 57.693 42.857 0.00 0.00 34.56 2.90
3600 5113 3.747854 TTTGCATCACAAAAGCCATCA 57.252 38.095 0.00 0.00 45.22 3.07
3645 5158 4.450122 GCACATGACACGCCTGCG 62.450 66.667 10.40 10.40 46.03 5.18
3687 5200 2.029623 TCTAATTCCGAACGGAGGGAG 58.970 52.381 15.34 13.04 46.06 4.30
3688 5201 2.148446 TCTAATTCCGAACGGAGGGA 57.852 50.000 15.34 9.77 46.06 4.20
3689 5202 2.102588 ACATCTAATTCCGAACGGAGGG 59.897 50.000 15.34 7.90 46.06 4.30
3690 5203 3.381949 GACATCTAATTCCGAACGGAGG 58.618 50.000 15.34 8.20 46.06 4.30
3691 5204 3.043586 CGACATCTAATTCCGAACGGAG 58.956 50.000 15.34 5.14 46.06 4.63
3692 5205 2.797087 GCGACATCTAATTCCGAACGGA 60.797 50.000 12.04 12.04 43.52 4.69
3693 5206 1.521423 GCGACATCTAATTCCGAACGG 59.479 52.381 6.94 6.94 0.00 4.44
3694 5207 1.187271 CGCGACATCTAATTCCGAACG 59.813 52.381 0.00 0.00 0.00 3.95
3695 5208 2.215812 GTCGCGACATCTAATTCCGAAC 59.784 50.000 33.09 0.55 0.00 3.95
3696 5209 2.098607 AGTCGCGACATCTAATTCCGAA 59.901 45.455 37.85 0.00 0.00 4.30
3697 5210 1.674441 AGTCGCGACATCTAATTCCGA 59.326 47.619 37.85 0.00 0.00 4.55
3698 5211 1.781429 CAGTCGCGACATCTAATTCCG 59.219 52.381 37.85 11.05 0.00 4.30
3699 5212 1.523095 GCAGTCGCGACATCTAATTCC 59.477 52.381 37.85 9.98 0.00 3.01
3700 5213 2.217393 CAGCAGTCGCGACATCTAATTC 59.783 50.000 37.85 13.32 45.49 2.17
3701 5214 2.196749 CAGCAGTCGCGACATCTAATT 58.803 47.619 37.85 15.41 45.49 1.40
3702 5215 1.135139 ACAGCAGTCGCGACATCTAAT 59.865 47.619 37.85 21.53 45.49 1.73
3703 5216 0.526211 ACAGCAGTCGCGACATCTAA 59.474 50.000 37.85 0.00 45.49 2.10
3704 5217 1.063616 GTACAGCAGTCGCGACATCTA 59.936 52.381 37.85 18.04 45.49 1.98
3705 5218 0.179161 GTACAGCAGTCGCGACATCT 60.179 55.000 37.85 29.33 45.49 2.90
3706 5219 0.456142 TGTACAGCAGTCGCGACATC 60.456 55.000 37.85 27.73 45.49 3.06
3707 5220 0.173481 ATGTACAGCAGTCGCGACAT 59.827 50.000 37.85 22.03 45.49 3.06
3708 5221 0.038618 AATGTACAGCAGTCGCGACA 60.039 50.000 37.85 18.13 45.49 4.35
3709 5222 1.904144 TAATGTACAGCAGTCGCGAC 58.096 50.000 31.30 31.30 45.49 5.19
3710 5223 2.459934 CATAATGTACAGCAGTCGCGA 58.540 47.619 3.71 3.71 45.49 5.87
3711 5224 1.071239 GCATAATGTACAGCAGTCGCG 60.071 52.381 0.00 0.00 45.49 5.87
3712 5225 1.933181 TGCATAATGTACAGCAGTCGC 59.067 47.619 0.33 0.00 38.99 5.19
3713 5226 4.801147 AATGCATAATGTACAGCAGTCG 57.199 40.909 12.36 0.00 40.71 4.18
3714 5227 5.230726 GCAAAATGCATAATGTACAGCAGTC 59.769 40.000 12.36 0.00 44.26 3.51
3715 5228 5.104374 GCAAAATGCATAATGTACAGCAGT 58.896 37.500 12.36 7.64 44.26 4.40
3716 5229 5.630896 GCAAAATGCATAATGTACAGCAG 57.369 39.130 12.36 1.73 44.26 4.24
3730 5243 6.813152 AGTATAAGGACATGTTTGCAAAATGC 59.187 34.615 22.93 17.89 45.29 3.56
3731 5244 8.761575 AAGTATAAGGACATGTTTGCAAAATG 57.238 30.769 14.67 19.61 0.00 2.32
3732 5245 9.777297 AAAAGTATAAGGACATGTTTGCAAAAT 57.223 25.926 14.67 7.20 0.00 1.82
3733 5246 9.039870 CAAAAGTATAAGGACATGTTTGCAAAA 57.960 29.630 14.67 5.00 0.00 2.44
3734 5247 8.417106 TCAAAAGTATAAGGACATGTTTGCAAA 58.583 29.630 8.05 8.05 0.00 3.68
3735 5248 7.946207 TCAAAAGTATAAGGACATGTTTGCAA 58.054 30.769 0.00 0.00 0.00 4.08
3736 5249 7.517614 TCAAAAGTATAAGGACATGTTTGCA 57.482 32.000 0.00 0.00 0.00 4.08
3737 5250 8.986477 ATTCAAAAGTATAAGGACATGTTTGC 57.014 30.769 0.00 0.00 0.00 3.68
3770 5283 2.281970 GGAGACGGGGGCGTTTTT 60.282 61.111 0.00 0.00 0.00 1.94
3771 5284 2.743126 GAAGGAGACGGGGGCGTTTT 62.743 60.000 0.00 0.00 0.00 2.43
3772 5285 3.246880 AAGGAGACGGGGGCGTTT 61.247 61.111 0.00 0.00 0.00 3.60
3773 5286 3.703127 GAAGGAGACGGGGGCGTT 61.703 66.667 0.00 0.00 0.00 4.84
3776 5289 3.471806 GAGGAAGGAGACGGGGGC 61.472 72.222 0.00 0.00 0.00 5.80
3777 5290 2.038975 TGAGGAAGGAGACGGGGG 59.961 66.667 0.00 0.00 0.00 5.40
3778 5291 0.033405 TAGTGAGGAAGGAGACGGGG 60.033 60.000 0.00 0.00 0.00 5.73
3779 5292 1.104630 GTAGTGAGGAAGGAGACGGG 58.895 60.000 0.00 0.00 0.00 5.28
3780 5293 2.018515 GAGTAGTGAGGAAGGAGACGG 58.981 57.143 0.00 0.00 0.00 4.79
3781 5294 2.018515 GGAGTAGTGAGGAAGGAGACG 58.981 57.143 0.00 0.00 0.00 4.18
3782 5295 2.756207 GTGGAGTAGTGAGGAAGGAGAC 59.244 54.545 0.00 0.00 0.00 3.36
3783 5296 2.291670 GGTGGAGTAGTGAGGAAGGAGA 60.292 54.545 0.00 0.00 0.00 3.71
3784 5297 2.104170 GGTGGAGTAGTGAGGAAGGAG 58.896 57.143 0.00 0.00 0.00 3.69
3785 5298 1.616187 CGGTGGAGTAGTGAGGAAGGA 60.616 57.143 0.00 0.00 0.00 3.36
3786 5299 0.818296 CGGTGGAGTAGTGAGGAAGG 59.182 60.000 0.00 0.00 0.00 3.46
3787 5300 1.473278 GACGGTGGAGTAGTGAGGAAG 59.527 57.143 0.00 0.00 0.00 3.46
3788 5301 1.542492 GACGGTGGAGTAGTGAGGAA 58.458 55.000 0.00 0.00 0.00 3.36
3789 5302 0.675837 CGACGGTGGAGTAGTGAGGA 60.676 60.000 0.00 0.00 0.00 3.71
3790 5303 1.801332 CGACGGTGGAGTAGTGAGG 59.199 63.158 0.00 0.00 0.00 3.86
3791 5304 1.136984 GCGACGGTGGAGTAGTGAG 59.863 63.158 0.00 0.00 0.00 3.51
3792 5305 1.303074 AGCGACGGTGGAGTAGTGA 60.303 57.895 0.00 0.00 0.00 3.41
3793 5306 1.136984 GAGCGACGGTGGAGTAGTG 59.863 63.158 3.31 0.00 0.00 2.74
3794 5307 1.303074 TGAGCGACGGTGGAGTAGT 60.303 57.895 3.31 0.00 0.00 2.73
3795 5308 1.136984 GTGAGCGACGGTGGAGTAG 59.863 63.158 3.31 0.00 0.00 2.57
3796 5309 2.683859 CGTGAGCGACGGTGGAGTA 61.684 63.158 3.31 0.00 44.85 2.59
3797 5310 4.039357 CGTGAGCGACGGTGGAGT 62.039 66.667 3.31 0.00 44.85 3.85
3823 5336 3.942439 GGGGATAGTGGCCGGAGC 61.942 72.222 5.05 0.00 38.76 4.70
3824 5337 3.242291 GGGGGATAGTGGCCGGAG 61.242 72.222 5.05 0.00 0.00 4.63
3827 5340 3.925090 GACGGGGGATAGTGGCCG 61.925 72.222 0.00 0.00 0.00 6.13
3828 5341 2.041206 GAAGACGGGGGATAGTGGCC 62.041 65.000 0.00 0.00 0.00 5.36
3829 5342 1.446366 GAAGACGGGGGATAGTGGC 59.554 63.158 0.00 0.00 0.00 5.01
3830 5343 0.398664 AGGAAGACGGGGGATAGTGG 60.399 60.000 0.00 0.00 0.00 4.00
3831 5344 1.041437 GAGGAAGACGGGGGATAGTG 58.959 60.000 0.00 0.00 0.00 2.74
3832 5345 0.105607 GGAGGAAGACGGGGGATAGT 60.106 60.000 0.00 0.00 0.00 2.12
3833 5346 0.832559 GGGAGGAAGACGGGGGATAG 60.833 65.000 0.00 0.00 0.00 2.08
3834 5347 1.235112 GGGAGGAAGACGGGGGATA 59.765 63.158 0.00 0.00 0.00 2.59
3835 5348 2.040779 GGGAGGAAGACGGGGGAT 60.041 66.667 0.00 0.00 0.00 3.85
3836 5349 4.410033 GGGGAGGAAGACGGGGGA 62.410 72.222 0.00 0.00 0.00 4.81
3840 5353 3.001406 AACGGGGGAGGAAGACGG 61.001 66.667 0.00 0.00 0.00 4.79
3841 5354 1.946475 GAGAACGGGGGAGGAAGACG 61.946 65.000 0.00 0.00 0.00 4.18
3842 5355 1.615165 GGAGAACGGGGGAGGAAGAC 61.615 65.000 0.00 0.00 0.00 3.01
3843 5356 1.305887 GGAGAACGGGGGAGGAAGA 60.306 63.158 0.00 0.00 0.00 2.87
3844 5357 1.306226 AGGAGAACGGGGGAGGAAG 60.306 63.158 0.00 0.00 0.00 3.46
3845 5358 1.305887 GAGGAGAACGGGGGAGGAA 60.306 63.158 0.00 0.00 0.00 3.36
3846 5359 2.363361 GAGGAGAACGGGGGAGGA 59.637 66.667 0.00 0.00 0.00 3.71
3847 5360 2.038975 TGAGGAGAACGGGGGAGG 59.961 66.667 0.00 0.00 0.00 4.30
3848 5361 2.726351 GCTGAGGAGAACGGGGGAG 61.726 68.421 0.00 0.00 0.00 4.30
3849 5362 2.683933 GCTGAGGAGAACGGGGGA 60.684 66.667 0.00 0.00 0.00 4.81
3850 5363 3.003173 TGCTGAGGAGAACGGGGG 61.003 66.667 0.00 0.00 0.00 5.40
3851 5364 2.266055 GTGCTGAGGAGAACGGGG 59.734 66.667 0.00 0.00 0.00 5.73
3852 5365 2.266055 GGTGCTGAGGAGAACGGG 59.734 66.667 0.00 0.00 0.00 5.28
3853 5366 2.266055 GGGTGCTGAGGAGAACGG 59.734 66.667 0.00 0.00 0.00 4.44
3854 5367 1.079543 CTGGGTGCTGAGGAGAACG 60.080 63.158 0.00 0.00 0.00 3.95
3855 5368 0.248843 CTCTGGGTGCTGAGGAGAAC 59.751 60.000 0.00 0.00 0.00 3.01
3856 5369 0.115152 TCTCTGGGTGCTGAGGAGAA 59.885 55.000 0.00 0.00 31.28 2.87
3857 5370 0.324183 CTCTCTGGGTGCTGAGGAGA 60.324 60.000 0.00 0.00 0.00 3.71
3858 5371 0.324183 TCTCTCTGGGTGCTGAGGAG 60.324 60.000 0.00 0.00 0.00 3.69
3859 5372 0.324183 CTCTCTCTGGGTGCTGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
3860 5373 0.614415 ACTCTCTCTGGGTGCTGAGG 60.614 60.000 0.00 0.00 0.00 3.86
3861 5374 0.817013 GACTCTCTCTGGGTGCTGAG 59.183 60.000 0.00 0.00 0.00 3.35
3862 5375 0.407528 AGACTCTCTCTGGGTGCTGA 59.592 55.000 0.00 0.00 0.00 4.26
3863 5376 0.817013 GAGACTCTCTCTGGGTGCTG 59.183 60.000 0.00 0.00 40.30 4.41
3864 5377 0.324275 GGAGACTCTCTCTGGGTGCT 60.324 60.000 6.02 0.00 42.95 4.40
3865 5378 1.662438 CGGAGACTCTCTCTGGGTGC 61.662 65.000 6.02 0.00 44.24 5.01
3866 5379 2.487918 CGGAGACTCTCTCTGGGTG 58.512 63.158 6.02 0.00 44.24 4.61
3871 5384 3.199190 CGCGCGGAGACTCTCTCT 61.199 66.667 24.84 0.00 42.95 3.10
3872 5385 3.443261 GACGCGCGGAGACTCTCTC 62.443 68.421 35.22 15.21 42.66 3.20
3873 5386 3.501548 GACGCGCGGAGACTCTCT 61.502 66.667 35.22 9.48 0.00 3.10
3874 5387 4.872485 CGACGCGCGGAGACTCTC 62.872 72.222 35.22 19.06 36.03 3.20
3887 5400 4.436998 GTCCTGGGTCCTGCGACG 62.437 72.222 0.00 0.00 40.17 5.12
3888 5401 4.083862 GGTCCTGGGTCCTGCGAC 62.084 72.222 0.00 6.83 38.38 5.19
3891 5404 3.721706 CTGGGTCCTGGGTCCTGC 61.722 72.222 0.00 0.00 0.00 4.85
3892 5405 3.721706 GCTGGGTCCTGGGTCCTG 61.722 72.222 0.00 1.57 0.00 3.86
3912 5425 2.498291 CAGGTCGTCTCCTGCACAGG 62.498 65.000 10.60 10.60 46.53 4.00
3913 5426 1.080230 CAGGTCGTCTCCTGCACAG 60.080 63.158 10.00 0.00 46.53 3.66
3914 5427 3.051210 CAGGTCGTCTCCTGCACA 58.949 61.111 10.00 0.00 46.53 4.57
3932 5445 4.517703 GTCTCCTCCGCGACGACG 62.518 72.222 8.23 2.12 42.93 5.12
3941 5454 4.500116 GTCCTGCGCGTCTCCTCC 62.500 72.222 8.43 0.00 0.00 4.30
3942 5455 4.500116 GGTCCTGCGCGTCTCCTC 62.500 72.222 8.43 0.00 0.00 3.71
3944 5457 3.991536 GAAGGTCCTGCGCGTCTCC 62.992 68.421 8.43 2.92 0.00 3.71
3945 5458 2.507324 GAAGGTCCTGCGCGTCTC 60.507 66.667 8.43 0.00 0.00 3.36
3946 5459 3.303135 TGAAGGTCCTGCGCGTCT 61.303 61.111 8.43 0.00 0.00 4.18
3947 5460 3.112709 GTGAAGGTCCTGCGCGTC 61.113 66.667 8.43 0.00 0.00 5.19
3950 5463 4.373116 TCCGTGAAGGTCCTGCGC 62.373 66.667 0.00 0.00 41.99 6.09
3951 5464 2.125912 CTCCGTGAAGGTCCTGCG 60.126 66.667 0.00 0.00 41.99 5.18
3952 5465 2.266055 CCTCCGTGAAGGTCCTGC 59.734 66.667 0.00 0.00 41.99 4.85
3953 5466 2.266055 GCCTCCGTGAAGGTCCTG 59.734 66.667 0.00 0.00 41.99 3.86
3954 5467 3.382832 CGCCTCCGTGAAGGTCCT 61.383 66.667 0.00 0.00 41.99 3.85
3958 5471 4.394712 AAGGCGCCTCCGTGAAGG 62.395 66.667 32.93 0.00 40.77 3.46
3959 5472 3.121030 CAAGGCGCCTCCGTGAAG 61.121 66.667 32.93 9.98 45.67 3.02
3993 5506 4.467084 ACACCCATGGCGGCTACG 62.467 66.667 11.43 0.00 44.63 3.51
3994 5507 2.824041 CACACCCATGGCGGCTAC 60.824 66.667 11.43 0.00 0.00 3.58
3995 5508 4.794648 GCACACCCATGGCGGCTA 62.795 66.667 11.43 0.00 0.00 3.93
4006 5519 4.468689 GGTAGGCGAGGGCACACC 62.469 72.222 0.00 0.00 42.47 4.16
4007 5520 3.391382 AGGTAGGCGAGGGCACAC 61.391 66.667 0.00 0.00 42.47 3.82
4008 5521 3.390521 CAGGTAGGCGAGGGCACA 61.391 66.667 0.00 0.00 42.47 4.57
4009 5522 3.075005 TCAGGTAGGCGAGGGCAC 61.075 66.667 0.00 0.00 42.47 5.01
4010 5523 2.759973 CTCAGGTAGGCGAGGGCA 60.760 66.667 0.00 0.00 42.47 5.36
4011 5524 4.228567 GCTCAGGTAGGCGAGGGC 62.229 72.222 0.00 0.00 38.90 5.19
4012 5525 2.759973 TGCTCAGGTAGGCGAGGG 60.760 66.667 0.00 0.00 0.00 4.30
4013 5526 2.811101 CTGCTCAGGTAGGCGAGG 59.189 66.667 0.00 0.00 0.00 4.63
4014 5527 2.105930 GCTGCTCAGGTAGGCGAG 59.894 66.667 0.00 0.00 0.00 5.03
4016 5529 4.880537 CCGCTGCTCAGGTAGGCG 62.881 72.222 0.00 0.00 44.48 5.52
4017 5530 4.537433 CCCGCTGCTCAGGTAGGC 62.537 72.222 0.00 0.00 0.00 3.93
4018 5531 1.690219 AATCCCGCTGCTCAGGTAGG 61.690 60.000 0.00 0.00 0.00 3.18
4019 5532 0.531532 CAATCCCGCTGCTCAGGTAG 60.532 60.000 0.00 0.00 0.00 3.18
4020 5533 1.522092 CAATCCCGCTGCTCAGGTA 59.478 57.895 0.00 0.00 0.00 3.08
4021 5534 2.270205 CAATCCCGCTGCTCAGGT 59.730 61.111 0.00 0.00 0.00 4.00
4022 5535 3.207669 GCAATCCCGCTGCTCAGG 61.208 66.667 0.00 0.00 36.84 3.86
4028 5541 1.303309 CTTTAGGAGCAATCCCGCTG 58.697 55.000 0.00 0.00 44.01 5.18
4030 5543 1.671328 GAACTTTAGGAGCAATCCCGC 59.329 52.381 0.00 0.00 0.00 6.13
4031 5544 3.268023 AGAACTTTAGGAGCAATCCCG 57.732 47.619 0.00 0.00 0.00 5.14
4032 5545 3.948473 GGAAGAACTTTAGGAGCAATCCC 59.052 47.826 0.00 0.00 0.00 3.85
4033 5546 4.849518 AGGAAGAACTTTAGGAGCAATCC 58.150 43.478 0.00 0.00 0.00 3.01
4034 5547 5.739959 AGAGGAAGAACTTTAGGAGCAATC 58.260 41.667 0.00 0.00 0.00 2.67
4035 5548 5.770685 AGAGGAAGAACTTTAGGAGCAAT 57.229 39.130 0.00 0.00 0.00 3.56
4036 5549 5.552178 GAAGAGGAAGAACTTTAGGAGCAA 58.448 41.667 0.00 0.00 0.00 3.91
4037 5550 4.322049 CGAAGAGGAAGAACTTTAGGAGCA 60.322 45.833 0.00 0.00 0.00 4.26
4038 5551 4.177783 CGAAGAGGAAGAACTTTAGGAGC 58.822 47.826 0.00 0.00 0.00 4.70
4039 5552 5.047943 TGACGAAGAGGAAGAACTTTAGGAG 60.048 44.000 0.00 0.00 0.00 3.69
4040 5553 4.831155 TGACGAAGAGGAAGAACTTTAGGA 59.169 41.667 0.00 0.00 0.00 2.94
4041 5554 4.924462 GTGACGAAGAGGAAGAACTTTAGG 59.076 45.833 0.00 0.00 0.00 2.69
4042 5555 4.924462 GGTGACGAAGAGGAAGAACTTTAG 59.076 45.833 0.00 0.00 0.00 1.85
4043 5556 4.587684 AGGTGACGAAGAGGAAGAACTTTA 59.412 41.667 0.00 0.00 0.00 1.85
4044 5557 3.388350 AGGTGACGAAGAGGAAGAACTTT 59.612 43.478 0.00 0.00 0.00 2.66
4045 5558 2.966516 AGGTGACGAAGAGGAAGAACTT 59.033 45.455 0.00 0.00 0.00 2.66
4046 5559 2.559231 GAGGTGACGAAGAGGAAGAACT 59.441 50.000 0.00 0.00 0.00 3.01
4047 5560 2.352912 GGAGGTGACGAAGAGGAAGAAC 60.353 54.545 0.00 0.00 0.00 3.01
4048 5561 1.893801 GGAGGTGACGAAGAGGAAGAA 59.106 52.381 0.00 0.00 0.00 2.52
4049 5562 1.546961 GGAGGTGACGAAGAGGAAGA 58.453 55.000 0.00 0.00 0.00 2.87
4050 5563 0.533032 GGGAGGTGACGAAGAGGAAG 59.467 60.000 0.00 0.00 0.00 3.46
4051 5564 0.114560 AGGGAGGTGACGAAGAGGAA 59.885 55.000 0.00 0.00 0.00 3.36
4052 5565 0.323542 GAGGGAGGTGACGAAGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
4053 5566 0.323908 AGAGGGAGGTGACGAAGAGG 60.324 60.000 0.00 0.00 0.00 3.69
4054 5567 0.814457 CAGAGGGAGGTGACGAAGAG 59.186 60.000 0.00 0.00 0.00 2.85
4055 5568 0.404426 TCAGAGGGAGGTGACGAAGA 59.596 55.000 0.00 0.00 0.00 2.87
4056 5569 1.257743 TTCAGAGGGAGGTGACGAAG 58.742 55.000 0.00 0.00 0.00 3.79
4057 5570 1.825474 GATTCAGAGGGAGGTGACGAA 59.175 52.381 0.00 0.00 0.00 3.85
4058 5571 1.475403 GATTCAGAGGGAGGTGACGA 58.525 55.000 0.00 0.00 0.00 4.20
4059 5572 0.101399 CGATTCAGAGGGAGGTGACG 59.899 60.000 0.00 0.00 0.00 4.35
4060 5573 1.134965 CACGATTCAGAGGGAGGTGAC 60.135 57.143 0.00 0.00 0.00 3.67
4061 5574 1.186200 CACGATTCAGAGGGAGGTGA 58.814 55.000 0.00 0.00 0.00 4.02
4062 5575 0.460987 GCACGATTCAGAGGGAGGTG 60.461 60.000 0.00 0.00 0.00 4.00
4063 5576 1.617947 GGCACGATTCAGAGGGAGGT 61.618 60.000 0.00 0.00 0.00 3.85
4064 5577 1.144936 GGCACGATTCAGAGGGAGG 59.855 63.158 0.00 0.00 0.00 4.30
4065 5578 0.250234 TTGGCACGATTCAGAGGGAG 59.750 55.000 0.00 0.00 0.00 4.30
4066 5579 0.250234 CTTGGCACGATTCAGAGGGA 59.750 55.000 0.00 0.00 0.00 4.20
4067 5580 0.250234 TCTTGGCACGATTCAGAGGG 59.750 55.000 0.00 0.00 0.00 4.30
4068 5581 2.005451 CTTCTTGGCACGATTCAGAGG 58.995 52.381 0.00 0.00 0.00 3.69
4069 5582 1.396301 GCTTCTTGGCACGATTCAGAG 59.604 52.381 0.00 0.00 0.00 3.35
4070 5583 1.270785 TGCTTCTTGGCACGATTCAGA 60.271 47.619 0.00 0.00 37.29 3.27
4071 5584 1.129998 CTGCTTCTTGGCACGATTCAG 59.870 52.381 0.00 1.97 37.29 3.02
4072 5585 1.159285 CTGCTTCTTGGCACGATTCA 58.841 50.000 0.00 0.00 37.29 2.57
4073 5586 1.160137 ACTGCTTCTTGGCACGATTC 58.840 50.000 0.00 0.00 37.29 2.52
4074 5587 2.472695 TACTGCTTCTTGGCACGATT 57.527 45.000 0.00 0.00 37.29 3.34
4075 5588 2.472695 TTACTGCTTCTTGGCACGAT 57.527 45.000 0.00 0.00 37.29 3.73
4076 5589 2.248280 TTTACTGCTTCTTGGCACGA 57.752 45.000 0.00 0.00 37.29 4.35
4077 5590 2.474526 CGATTTACTGCTTCTTGGCACG 60.475 50.000 0.00 0.00 37.29 5.34
4078 5591 2.742053 TCGATTTACTGCTTCTTGGCAC 59.258 45.455 0.00 0.00 37.29 5.01
4079 5592 2.742053 GTCGATTTACTGCTTCTTGGCA 59.258 45.455 0.00 0.00 40.15 4.92
4080 5593 2.222819 CGTCGATTTACTGCTTCTTGGC 60.223 50.000 0.00 0.00 0.00 4.52
4081 5594 3.060895 GTCGTCGATTTACTGCTTCTTGG 59.939 47.826 0.00 0.00 0.00 3.61
4082 5595 3.921021 AGTCGTCGATTTACTGCTTCTTG 59.079 43.478 0.00 0.00 0.00 3.02
4083 5596 4.175787 AGTCGTCGATTTACTGCTTCTT 57.824 40.909 0.00 0.00 0.00 2.52
4084 5597 3.851976 AGTCGTCGATTTACTGCTTCT 57.148 42.857 0.00 0.00 0.00 2.85
4085 5598 4.036352 CCTAGTCGTCGATTTACTGCTTC 58.964 47.826 0.00 0.00 0.00 3.86
4086 5599 3.442977 ACCTAGTCGTCGATTTACTGCTT 59.557 43.478 0.00 0.00 0.00 3.91
4087 5600 3.015327 ACCTAGTCGTCGATTTACTGCT 58.985 45.455 0.00 0.00 0.00 4.24
4088 5601 3.361414 GACCTAGTCGTCGATTTACTGC 58.639 50.000 0.00 0.00 0.00 4.40
4089 5602 3.626670 AGGACCTAGTCGTCGATTTACTG 59.373 47.826 0.00 0.00 33.30 2.74
4090 5603 3.876320 GAGGACCTAGTCGTCGATTTACT 59.124 47.826 0.00 0.00 37.62 2.24
4091 5604 4.208074 GAGGACCTAGTCGTCGATTTAC 57.792 50.000 0.00 0.00 37.62 2.01
4098 5611 2.223525 CCAAATCGAGGACCTAGTCGTC 60.224 54.545 0.00 7.24 41.98 4.20
4099 5612 1.749634 CCAAATCGAGGACCTAGTCGT 59.250 52.381 0.00 0.00 37.46 4.34
4100 5613 1.749634 ACCAAATCGAGGACCTAGTCG 59.250 52.381 0.00 0.00 37.54 4.18
4101 5614 2.101082 GGACCAAATCGAGGACCTAGTC 59.899 54.545 0.00 0.00 37.87 2.59
4102 5615 2.108970 GGACCAAATCGAGGACCTAGT 58.891 52.381 0.00 0.00 37.87 2.57
4103 5616 1.067212 CGGACCAAATCGAGGACCTAG 59.933 57.143 8.59 0.00 38.58 3.02
4104 5617 1.108776 CGGACCAAATCGAGGACCTA 58.891 55.000 8.59 0.00 38.58 3.08
4105 5618 1.898154 CGGACCAAATCGAGGACCT 59.102 57.895 0.00 0.00 38.58 3.85
4106 5619 1.814169 GCGGACCAAATCGAGGACC 60.814 63.158 0.00 0.00 37.57 4.46
4107 5620 1.814169 GGCGGACCAAATCGAGGAC 60.814 63.158 0.00 0.00 35.26 3.85
4108 5621 1.550130 AAGGCGGACCAAATCGAGGA 61.550 55.000 0.00 0.00 39.06 3.71
4109 5622 1.078426 AAGGCGGACCAAATCGAGG 60.078 57.895 0.00 0.00 39.06 4.63
4110 5623 1.369091 CCAAGGCGGACCAAATCGAG 61.369 60.000 0.00 0.00 39.06 4.04
4111 5624 1.376683 CCAAGGCGGACCAAATCGA 60.377 57.895 0.00 0.00 39.06 3.59
4112 5625 3.051392 GCCAAGGCGGACCAAATCG 62.051 63.158 0.00 0.00 39.06 3.34
4113 5626 2.710902 GGCCAAGGCGGACCAAATC 61.711 63.158 4.80 0.00 43.06 2.17
4114 5627 2.679996 GGCCAAGGCGGACCAAAT 60.680 61.111 4.80 0.00 43.06 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.