Multiple sequence alignment - TraesCS5B01G136900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G136900 chr5B 100.000 4740 0 0 1 4740 256618142 256613403 0.000000e+00 8754.0
1 TraesCS5B01G136900 chr5A 93.023 3526 191 22 500 4004 311677506 311674015 0.000000e+00 5097.0
2 TraesCS5B01G136900 chr5A 89.389 622 34 10 4050 4639 311673912 311673291 0.000000e+00 754.0
3 TraesCS5B01G136900 chr5A 90.503 358 22 4 144 498 311678131 311677783 3.340000e-126 462.0
4 TraesCS5B01G136900 chr5A 93.056 144 9 1 1 144 311678305 311678163 4.810000e-50 209.0
5 TraesCS5B01G136900 chr5A 93.860 114 3 4 4626 4739 698500809 698500700 8.160000e-38 169.0
6 TraesCS5B01G136900 chr5D 91.814 2883 164 29 147 3002 241848092 241845255 0.000000e+00 3951.0
7 TraesCS5B01G136900 chr5D 94.353 974 51 3 3035 4004 241845254 241844281 0.000000e+00 1491.0
8 TraesCS5B01G136900 chr5D 89.358 592 35 7 4076 4639 241844079 241843488 0.000000e+00 719.0
9 TraesCS5B01G136900 chr6B 94.828 116 3 3 4628 4740 601199608 601199493 1.360000e-40 178.0
10 TraesCS5B01G136900 chr6D 95.455 110 5 0 4631 4740 42565383 42565274 4.880000e-40 176.0
11 TraesCS5B01G136900 chr4A 97.087 103 3 0 4638 4740 329838371 329838473 1.750000e-39 174.0
12 TraesCS5B01G136900 chr3B 97.087 103 3 0 4638 4740 507505713 507505611 1.750000e-39 174.0
13 TraesCS5B01G136900 chr3B 93.750 112 7 0 4629 4740 26608007 26607896 8.160000e-38 169.0
14 TraesCS5B01G136900 chr3B 82.734 139 23 1 1878 2016 264009182 264009319 6.440000e-24 122.0
15 TraesCS5B01G136900 chr2A 94.595 111 5 1 4631 4740 460904172 460904062 2.270000e-38 171.0
16 TraesCS5B01G136900 chr6A 93.103 116 6 2 4626 4740 20022168 20022054 8.160000e-38 169.0
17 TraesCS5B01G136900 chr4B 93.103 116 5 3 4625 4740 639158419 639158531 2.930000e-37 167.0
18 TraesCS5B01G136900 chr3D 82.963 135 23 0 1878 2012 185236312 185236446 6.440000e-24 122.0
19 TraesCS5B01G136900 chr3A 82.734 139 23 1 1878 2016 244351949 244352086 6.440000e-24 122.0
20 TraesCS5B01G136900 chrUn 84.404 109 15 2 1 108 94669433 94669540 6.490000e-19 106.0
21 TraesCS5B01G136900 chr7B 78.621 145 29 2 1 144 678093403 678093546 1.400000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G136900 chr5B 256613403 256618142 4739 True 8754.000000 8754 100.000000 1 4740 1 chr5B.!!$R1 4739
1 TraesCS5B01G136900 chr5A 311673291 311678305 5014 True 1630.500000 5097 91.492750 1 4639 4 chr5A.!!$R2 4638
2 TraesCS5B01G136900 chr5D 241843488 241848092 4604 True 2053.666667 3951 91.841667 147 4639 3 chr5D.!!$R1 4492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 1.000060 CCGACTCGGTTCTTGTAACCA 60.000 52.381 9.51 0.0 42.73 3.67 F
1001 1335 0.327259 TGAAGCAGCAGCAAGAGGAT 59.673 50.000 3.17 0.0 45.49 3.24 F
1744 2094 0.907704 ACCCAGGAATAGTGCCACGA 60.908 55.000 0.00 0.0 0.00 4.35 F
2570 2928 0.249120 TCGCCACATCGACATTCCTT 59.751 50.000 0.00 0.0 33.02 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1360 1707 0.530870 GGTAGCAGAAGACGATGGCC 60.531 60.0 0.0 0.0 0.00 5.36 R
2123 2473 0.264955 TCTCTCTTCCCGGCCCTTAT 59.735 55.0 0.0 0.0 0.00 1.73 R
2630 2988 0.267356 AGGCCTTCCAGATAGAGCCT 59.733 55.0 0.0 0.0 45.72 4.58 R
4344 4944 0.035630 CCAGTCTTGAGAGCTTGGGG 60.036 60.0 0.0 0.0 0.00 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.000060 CCGACTCGGTTCTTGTAACCA 60.000 52.381 9.51 0.00 42.73 3.67
49 50 3.542648 GTTCTTGTAACCATAGGGGCTC 58.457 50.000 0.00 0.00 42.05 4.70
59 60 3.144125 ACCATAGGGGCTCTGGTATCTTA 59.856 47.826 0.00 0.00 38.82 2.10
66 67 5.663556 AGGGGCTCTGGTATCTTATATAAGC 59.336 44.000 16.37 3.55 33.40 3.09
144 145 2.341846 ACACCCCAACCGCAATATAG 57.658 50.000 0.00 0.00 0.00 1.31
145 146 1.133915 ACACCCCAACCGCAATATAGG 60.134 52.381 0.00 0.00 0.00 2.57
204 237 3.067461 CCCTCTAATCTTCTCACCTCGTG 59.933 52.174 0.00 0.00 34.45 4.35
227 260 4.503991 GGAGACACCATACCATCAGAATCC 60.504 50.000 0.00 0.00 38.79 3.01
308 341 7.428562 GATGCAATCGAACAACTTCTATTTG 57.571 36.000 0.00 0.00 31.13 2.32
408 444 6.455690 AGGAGGAAATGGAAAGAAACTACT 57.544 37.500 0.00 0.00 0.00 2.57
409 445 7.569599 AGGAGGAAATGGAAAGAAACTACTA 57.430 36.000 0.00 0.00 0.00 1.82
410 446 7.625469 AGGAGGAAATGGAAAGAAACTACTAG 58.375 38.462 0.00 0.00 0.00 2.57
411 447 7.237887 AGGAGGAAATGGAAAGAAACTACTAGT 59.762 37.037 0.00 0.00 0.00 2.57
412 448 8.537858 GGAGGAAATGGAAAGAAACTACTAGTA 58.462 37.037 1.89 1.89 0.00 1.82
413 449 9.368674 GAGGAAATGGAAAGAAACTACTAGTAC 57.631 37.037 0.00 0.00 0.00 2.73
414 450 9.102453 AGGAAATGGAAAGAAACTACTAGTACT 57.898 33.333 0.00 0.00 0.00 2.73
455 511 5.985781 ACTACGTTTGTGCTTATTTCACAG 58.014 37.500 0.00 0.00 44.18 3.66
456 512 3.628017 ACGTTTGTGCTTATTTCACAGC 58.372 40.909 0.00 0.00 44.18 4.40
457 513 3.066064 ACGTTTGTGCTTATTTCACAGCA 59.934 39.130 0.00 0.00 44.18 4.41
461 517 2.330231 TGCTTATTTCACAGCAACGC 57.670 45.000 0.00 0.00 43.14 4.84
462 518 1.879380 TGCTTATTTCACAGCAACGCT 59.121 42.857 0.00 0.00 43.14 5.07
476 532 4.014847 GCAACGCTGCTTATATTTCACA 57.985 40.909 2.93 0.00 45.74 3.58
479 535 5.003778 GCAACGCTGCTTATATTTCACAAAG 59.996 40.000 2.93 0.00 45.74 2.77
498 554 2.235891 AGATGTCCATACGCGTCCATA 58.764 47.619 18.63 0.00 0.00 2.74
514 845 5.107453 GCGTCCATAATGTTTCTAGAATCCG 60.107 44.000 5.89 3.58 0.00 4.18
516 847 6.868864 CGTCCATAATGTTTCTAGAATCCGAT 59.131 38.462 5.89 0.00 0.00 4.18
543 874 1.477923 GCCCCACGGATTGGCTTAATA 60.478 52.381 0.00 0.00 45.37 0.98
547 878 3.253188 CCCACGGATTGGCTTAATATGTG 59.747 47.826 0.00 9.36 45.37 3.21
559 890 5.116180 GCTTAATATGTGTAGGCTGTGTGA 58.884 41.667 0.00 0.00 0.00 3.58
570 901 1.542915 GGCTGTGTGATGCTGAACAAT 59.457 47.619 0.00 0.00 0.00 2.71
571 902 2.749076 GGCTGTGTGATGCTGAACAATA 59.251 45.455 0.00 0.00 0.00 1.90
572 903 3.191162 GGCTGTGTGATGCTGAACAATAA 59.809 43.478 0.00 0.00 0.00 1.40
573 904 4.142315 GGCTGTGTGATGCTGAACAATAAT 60.142 41.667 0.00 0.00 0.00 1.28
574 905 5.032863 GCTGTGTGATGCTGAACAATAATC 58.967 41.667 0.00 0.00 0.00 1.75
578 909 5.355071 GTGTGATGCTGAACAATAATCCTCA 59.645 40.000 0.00 0.00 0.00 3.86
595 927 3.825014 TCCTCAGGCATATACTACCGTTC 59.175 47.826 0.00 0.00 0.00 3.95
600 932 3.514309 AGGCATATACTACCGTTCATCCC 59.486 47.826 0.00 0.00 0.00 3.85
685 1017 2.027192 AGTGTACACATCAAGGCCGATT 60.027 45.455 27.06 0.00 0.00 3.34
783 1115 1.594331 ACGCTCCAAAGTCCAAACTC 58.406 50.000 0.00 0.00 33.48 3.01
803 1135 3.872603 TCCTGCCTGCAACCACGT 61.873 61.111 0.00 0.00 0.00 4.49
824 1157 5.813672 ACGTCTTAAACAAGAGCAAAGTACA 59.186 36.000 0.00 0.00 0.00 2.90
970 1304 4.220602 ACAGAAAAATTCCAATCTTCCCCG 59.779 41.667 0.00 0.00 0.00 5.73
978 1312 1.533625 CAATCTTCCCCGTGCTTGAA 58.466 50.000 0.00 0.00 0.00 2.69
1001 1335 0.327259 TGAAGCAGCAGCAAGAGGAT 59.673 50.000 3.17 0.00 45.49 3.24
1101 1435 3.981211 AGGAAACAACGTACGTACATGT 58.019 40.909 23.12 23.01 0.00 3.21
1108 1442 3.015934 ACGTACGTACATGTTTGCTCA 57.984 42.857 21.41 0.00 0.00 4.26
1130 1464 1.222113 CCCCTCTTCGCCTTCTTCC 59.778 63.158 0.00 0.00 0.00 3.46
1262 1609 4.021981 CAGAGTGTACTCACCACAGATCAA 60.022 45.833 13.95 0.00 45.21 2.57
1429 1776 2.551006 GCAACCACACATGCACCGA 61.551 57.895 0.00 0.00 42.12 4.69
1482 1829 6.267928 ACACTAGTGGTTAGTCTTCATCTTGT 59.732 38.462 26.12 0.00 40.68 3.16
1531 1878 6.983906 TCTTCATCAGCTCTACCATCATAA 57.016 37.500 0.00 0.00 0.00 1.90
1564 1911 2.233271 CAATGGCTGGAGTCAACAACT 58.767 47.619 0.00 0.00 42.42 3.16
1603 1950 1.832167 GGCTGAAACCAACAGGGCA 60.832 57.895 0.00 0.00 42.05 5.36
1604 1951 1.363807 GCTGAAACCAACAGGGCAC 59.636 57.895 0.00 0.00 42.05 5.01
1660 2007 1.438651 TACCAGATGCAACGCTGAAC 58.561 50.000 14.05 0.00 34.06 3.18
1676 2023 3.181476 GCTGAACAACCCTTGTGATGTTT 60.181 43.478 0.00 0.00 44.59 2.83
1744 2094 0.907704 ACCCAGGAATAGTGCCACGA 60.908 55.000 0.00 0.00 0.00 4.35
1846 2196 2.125673 CGGATGAGGTTTCGCCGT 60.126 61.111 0.00 0.00 43.70 5.68
2029 2379 5.443693 CGTAAGTACACACGGTTATTGCTTC 60.444 44.000 10.46 0.00 34.57 3.86
2044 2394 3.560636 TGCTTCTTCCCTACCATTAGC 57.439 47.619 0.00 0.00 0.00 3.09
2082 2432 7.398332 TCATTATGATAAGGATCTAGCAGAGCA 59.602 37.037 0.00 0.00 30.96 4.26
2122 2472 8.797438 ACCTTTCTTGATTGAACTTTATCTTCC 58.203 33.333 0.00 0.00 0.00 3.46
2123 2473 8.796475 CCTTTCTTGATTGAACTTTATCTTCCA 58.204 33.333 0.00 0.00 0.00 3.53
2132 2482 4.086706 ACTTTATCTTCCATAAGGGCCG 57.913 45.455 0.00 0.00 36.21 6.13
2141 2491 0.394565 CATAAGGGCCGGGAAGAGAG 59.605 60.000 2.18 0.00 0.00 3.20
2144 2494 0.621862 AAGGGCCGGGAAGAGAGAAT 60.622 55.000 2.18 0.00 0.00 2.40
2146 2496 1.524849 GGCCGGGAAGAGAGAATGC 60.525 63.158 2.18 0.00 0.00 3.56
2153 2503 3.359950 GGGAAGAGAGAATGCCAAACAT 58.640 45.455 0.00 0.00 42.30 2.71
2188 2545 1.415200 CAGACCTAGCCTAACTCCCC 58.585 60.000 0.00 0.00 0.00 4.81
2193 2550 4.035814 GACCTAGCCTAACTCCCCTTAAA 58.964 47.826 0.00 0.00 0.00 1.52
2202 2559 3.790089 ACTCCCCTTAAACACCTCTTG 57.210 47.619 0.00 0.00 0.00 3.02
2252 2609 9.706691 GGTATATCTAAAGCTATGCAGTTTACA 57.293 33.333 0.00 0.00 0.00 2.41
2259 2616 7.930513 AAAGCTATGCAGTTTACAAAAAGAC 57.069 32.000 0.00 0.00 0.00 3.01
2267 2624 8.401046 TGCAGTTTACAAAAAGACATTTACAC 57.599 30.769 0.00 0.00 0.00 2.90
2274 2631 5.128663 ACAAAAAGACATTTACACTTGGGCT 59.871 36.000 0.00 0.00 0.00 5.19
2275 2632 5.869649 AAAAGACATTTACACTTGGGCTT 57.130 34.783 0.00 0.00 0.00 4.35
2276 2633 6.969993 AAAAGACATTTACACTTGGGCTTA 57.030 33.333 0.00 0.00 0.00 3.09
2277 2634 6.575162 AAAGACATTTACACTTGGGCTTAG 57.425 37.500 0.00 0.00 0.00 2.18
2278 2635 5.499004 AGACATTTACACTTGGGCTTAGA 57.501 39.130 0.00 0.00 0.00 2.10
2279 2636 5.491982 AGACATTTACACTTGGGCTTAGAG 58.508 41.667 0.00 0.00 0.00 2.43
2300 2657 9.533253 TTAGAGTTGTAACAGTACTACAAAACC 57.467 33.333 10.53 4.61 40.11 3.27
2348 2705 1.487976 ACATACAGCTAGTGGCAGCAT 59.512 47.619 0.00 0.00 44.35 3.79
2360 2717 0.443869 GGCAGCATGTCGTTAGTGTG 59.556 55.000 0.00 0.00 39.31 3.82
2476 2834 6.650807 CACTAGTTGACTTTTGAGCCTCAATA 59.349 38.462 8.18 2.51 36.11 1.90
2504 2862 2.033299 GGCCCATCATAATCACAACGTG 59.967 50.000 0.00 0.00 34.45 4.49
2546 2904 4.082136 AGGAACTACCGCTACTTCTTTCTG 60.082 45.833 0.00 0.00 44.74 3.02
2570 2928 0.249120 TCGCCACATCGACATTCCTT 59.751 50.000 0.00 0.00 33.02 3.36
2630 2988 0.237235 GCGAAATGCAAGACAACGGA 59.763 50.000 0.00 0.00 45.45 4.69
2711 3069 6.385649 ACTTCAATTGTTGTATGGTTCGTT 57.614 33.333 5.13 0.00 0.00 3.85
2725 3083 0.887387 TTCGTTGGTGGCCTAACAGC 60.887 55.000 3.32 0.22 39.22 4.40
2793 3151 8.532977 TTCCTTTTGCTGCAATTTTAGATAAC 57.467 30.769 16.77 0.00 0.00 1.89
2795 3153 8.367156 TCCTTTTGCTGCAATTTTAGATAACTT 58.633 29.630 16.77 0.00 0.00 2.66
2824 3185 9.538508 GTTTCTAGTCCTTTTAACTGTAACTGA 57.461 33.333 0.00 0.00 0.00 3.41
2862 3223 9.011095 TGAGTACACTATACAATACTCATAGGC 57.989 37.037 8.50 0.00 45.32 3.93
2884 3245 4.376146 CCTAATCTCTTGAACTAGCTGCC 58.624 47.826 0.00 0.00 0.00 4.85
2893 3254 3.587498 TGAACTAGCTGCCCCATATACT 58.413 45.455 0.00 0.00 0.00 2.12
2898 3259 4.712337 ACTAGCTGCCCCATATACTATGAC 59.288 45.833 0.00 0.00 0.00 3.06
2941 3302 3.426787 TTCCTGCCTTGGTCGATTAAA 57.573 42.857 0.00 0.00 0.00 1.52
2952 3313 6.093495 CCTTGGTCGATTAAATAGAAACAGCA 59.907 38.462 0.00 0.00 0.00 4.41
2997 3358 0.185901 TGAAAAAGTGGGGCAGAGCT 59.814 50.000 0.00 0.00 0.00 4.09
3002 3363 0.995024 AAGTGGGGCAGAGCTGTATT 59.005 50.000 0.00 0.00 0.00 1.89
3003 3364 0.254178 AGTGGGGCAGAGCTGTATTG 59.746 55.000 0.00 0.00 0.00 1.90
3004 3365 0.253044 GTGGGGCAGAGCTGTATTGA 59.747 55.000 0.00 0.00 0.00 2.57
3005 3366 0.991146 TGGGGCAGAGCTGTATTGAA 59.009 50.000 0.00 0.00 0.00 2.69
3006 3367 1.354031 TGGGGCAGAGCTGTATTGAAA 59.646 47.619 0.00 0.00 0.00 2.69
3007 3368 2.224992 TGGGGCAGAGCTGTATTGAAAA 60.225 45.455 0.00 0.00 0.00 2.29
3008 3369 3.026694 GGGGCAGAGCTGTATTGAAAAT 58.973 45.455 0.00 0.00 0.00 1.82
3009 3370 3.181483 GGGGCAGAGCTGTATTGAAAATG 60.181 47.826 0.00 0.00 0.00 2.32
3010 3371 3.445096 GGGCAGAGCTGTATTGAAAATGT 59.555 43.478 0.00 0.00 0.00 2.71
3011 3372 4.082026 GGGCAGAGCTGTATTGAAAATGTT 60.082 41.667 0.00 0.00 0.00 2.71
3012 3373 5.125417 GGGCAGAGCTGTATTGAAAATGTTA 59.875 40.000 0.00 0.00 0.00 2.41
3013 3374 6.350110 GGGCAGAGCTGTATTGAAAATGTTAA 60.350 38.462 0.00 0.00 0.00 2.01
3014 3375 6.528072 GGCAGAGCTGTATTGAAAATGTTAAC 59.472 38.462 0.00 0.00 0.00 2.01
3015 3376 7.308435 GCAGAGCTGTATTGAAAATGTTAACT 58.692 34.615 7.22 0.00 0.00 2.24
3016 3377 8.450964 GCAGAGCTGTATTGAAAATGTTAACTA 58.549 33.333 7.22 0.00 0.00 2.24
3027 3388 8.294954 TGAAAATGTTAACTAAAGACCAACCA 57.705 30.769 7.22 0.00 0.00 3.67
3067 3428 7.601130 GTGTATTGTTTGTGATGTCTAGTGGTA 59.399 37.037 0.00 0.00 0.00 3.25
3263 3624 1.010046 TCACCAAGATCCCTCCTCCAT 59.990 52.381 0.00 0.00 0.00 3.41
3301 3662 1.831106 CATGTAGGTGAGGGTGCACTA 59.169 52.381 17.98 0.00 38.78 2.74
3345 3706 2.220653 ATTGGGTTGGATGTGACCAG 57.779 50.000 0.00 0.00 41.19 4.00
3346 3707 0.539438 TTGGGTTGGATGTGACCAGC 60.539 55.000 0.00 0.00 41.19 4.85
3382 3743 7.537715 AGATTGATACAGATATGCGAGAGAAG 58.462 38.462 0.00 0.00 0.00 2.85
3400 3761 0.396835 AGGAAGTACTCGTAGGGGGC 60.397 60.000 0.00 0.00 0.00 5.80
3455 3816 5.501156 ACTATGGTTCCTTTGAAGATGGTC 58.499 41.667 0.00 0.00 0.00 4.02
3457 3818 3.754965 TGGTTCCTTTGAAGATGGTCTG 58.245 45.455 0.00 0.00 0.00 3.51
3526 3887 1.869774 CTTGGGCACAAAAAGGAAGC 58.130 50.000 1.48 0.00 35.89 3.86
3603 3964 5.463724 GTGAGGACGATGCTAAGGAAATTAG 59.536 44.000 0.00 0.00 43.33 1.73
3605 3966 5.360591 AGGACGATGCTAAGGAAATTAGTG 58.639 41.667 0.00 0.00 42.57 2.74
3649 4010 4.380550 CGGACATCTACAGAAGCTAACACA 60.381 45.833 0.00 0.00 0.00 3.72
3650 4011 5.105752 GGACATCTACAGAAGCTAACACAG 58.894 45.833 0.00 0.00 0.00 3.66
3661 4022 5.717178 AGAAGCTAACACAGTATCTGAGGAA 59.283 40.000 3.70 0.00 35.18 3.36
3690 4051 4.691216 AGTTCAGGACGATGCTAAAGAAAC 59.309 41.667 0.00 0.00 0.00 2.78
3697 4058 5.638234 GGACGATGCTAAAGAAACTAACACT 59.362 40.000 0.00 0.00 0.00 3.55
3710 4071 8.196378 AGAAACTAACACTCCAGATAGAAGTT 57.804 34.615 0.00 0.00 0.00 2.66
3730 4091 0.035056 CCGCCCAGTCCTTGAAAGAT 60.035 55.000 0.00 0.00 0.00 2.40
3746 4107 9.202273 CCTTGAAAGATATGAGCTGATAAGTAC 57.798 37.037 0.00 0.00 0.00 2.73
3747 4108 9.979578 CTTGAAAGATATGAGCTGATAAGTACT 57.020 33.333 0.00 0.00 0.00 2.73
3814 4175 7.392953 TGTGAGTTGGCATCATTCTTTACAATA 59.607 33.333 0.00 0.00 0.00 1.90
3834 4196 7.934457 ACAATATATAGAAAAGGCAAGTGCAG 58.066 34.615 5.52 0.00 44.36 4.41
3842 4204 2.119801 AGGCAAGTGCAGGACTATTG 57.880 50.000 5.52 0.00 44.36 1.90
3849 4211 5.123820 GCAAGTGCAGGACTATTGAATTACA 59.876 40.000 0.00 0.00 41.59 2.41
3854 4216 6.763135 GTGCAGGACTATTGAATTACATCAGA 59.237 38.462 0.00 0.00 0.00 3.27
3881 4243 9.533831 AAATGATTTAAGGAGTGTAATGAACCT 57.466 29.630 0.00 0.00 0.00 3.50
3934 4300 8.671921 TGTTACATTAGACGTTCCTAACTCTAG 58.328 37.037 0.00 0.00 32.11 2.43
3954 4320 0.108520 GGCATGTTGACCTTGCATGG 60.109 55.000 16.76 16.76 44.00 3.66
3955 4321 0.108520 GCATGTTGACCTTGCATGGG 60.109 55.000 21.67 13.32 42.30 4.00
3992 4361 8.994170 AGCAAGAAAGAGTTTGAATAGTTCTAC 58.006 33.333 0.00 0.00 0.00 2.59
4009 4378 9.775854 ATAGTTCTACTGATGAATTCATTCCTG 57.224 33.333 21.57 15.16 36.57 3.86
4010 4379 7.855375 AGTTCTACTGATGAATTCATTCCTGA 58.145 34.615 21.57 13.23 36.57 3.86
4011 4380 7.768120 AGTTCTACTGATGAATTCATTCCTGAC 59.232 37.037 21.57 13.80 36.57 3.51
4012 4381 7.429374 TCTACTGATGAATTCATTCCTGACT 57.571 36.000 21.57 0.00 36.57 3.41
4013 4382 7.855375 TCTACTGATGAATTCATTCCTGACTT 58.145 34.615 21.57 0.00 36.57 3.01
4014 4383 8.981659 TCTACTGATGAATTCATTCCTGACTTA 58.018 33.333 21.57 5.24 36.57 2.24
4015 4384 9.258826 CTACTGATGAATTCATTCCTGACTTAG 57.741 37.037 21.57 6.97 36.57 2.18
4016 4385 7.628234 ACTGATGAATTCATTCCTGACTTAGT 58.372 34.615 21.57 7.57 36.57 2.24
4017 4386 8.762645 ACTGATGAATTCATTCCTGACTTAGTA 58.237 33.333 21.57 0.00 36.57 1.82
4018 4387 9.605275 CTGATGAATTCATTCCTGACTTAGTAA 57.395 33.333 21.57 0.00 36.57 2.24
4041 4410 7.976135 AATGAAGCAGGTCAGATGATATAAC 57.024 36.000 0.00 0.00 0.00 1.89
4042 4411 5.858381 TGAAGCAGGTCAGATGATATAACC 58.142 41.667 0.00 0.00 0.00 2.85
4045 4414 6.252599 AGCAGGTCAGATGATATAACCAAA 57.747 37.500 0.00 0.00 32.25 3.28
4047 4416 7.977818 AGCAGGTCAGATGATATAACCAAATA 58.022 34.615 0.00 0.00 32.25 1.40
4146 4719 4.981674 AGATTTGTGCAAATTACAACACGG 59.018 37.500 10.94 0.00 40.77 4.94
4180 4753 6.801539 TGCACATAACTTAACTTCAAGAGG 57.198 37.500 0.00 0.00 0.00 3.69
4182 4755 6.995686 TGCACATAACTTAACTTCAAGAGGAA 59.004 34.615 0.00 0.00 0.00 3.36
4183 4756 7.665559 TGCACATAACTTAACTTCAAGAGGAAT 59.334 33.333 0.00 0.00 34.32 3.01
4226 4823 7.620880 AGGTAGTACAAAGCATCAACAGAATA 58.379 34.615 2.06 0.00 0.00 1.75
4237 4834 5.684626 GCATCAACAGAATAAATGCTACTGC 59.315 40.000 0.00 0.00 39.62 4.40
4240 4837 6.172630 TCAACAGAATAAATGCTACTGCTCA 58.827 36.000 0.00 0.00 40.48 4.26
4288 4888 1.508632 GAGCACGCTAAACTGTCCAA 58.491 50.000 0.00 0.00 0.00 3.53
4297 4897 4.201871 CGCTAAACTGTCCAAAACAACTGA 60.202 41.667 0.00 0.00 37.45 3.41
4300 4900 6.756542 GCTAAACTGTCCAAAACAACTGAAAT 59.243 34.615 0.00 0.00 37.45 2.17
4312 4912 9.956797 CAAAACAACTGAAATTTTGTAACTCAG 57.043 29.630 0.00 0.00 38.13 3.35
4342 4942 1.579429 CAAAAGCAGTACCACGGGC 59.421 57.895 0.00 0.00 0.00 6.13
4344 4944 3.562732 AAAGCAGTACCACGGGCCC 62.563 63.158 13.57 13.57 0.00 5.80
4474 5074 2.166459 CGAGAATAGCAGTTCCTGGACA 59.834 50.000 0.00 0.00 31.21 4.02
4522 5122 0.311790 ACACAGTGCATGAAAAGCCG 59.688 50.000 0.00 0.00 0.00 5.52
4528 5128 0.326595 TGCATGAAAAGCCGAGGGTA 59.673 50.000 0.00 0.00 0.00 3.69
4534 5134 2.210961 GAAAAGCCGAGGGTACTATGC 58.789 52.381 0.00 0.00 0.00 3.14
4556 5156 4.344102 GCCCACTACTACAAGGATGTGATA 59.656 45.833 0.00 0.00 40.84 2.15
4587 5187 9.508567 GAATGACTTGTTCAATCTAAAATAGGC 57.491 33.333 0.00 0.00 37.92 3.93
4588 5188 7.391148 TGACTTGTTCAATCTAAAATAGGCC 57.609 36.000 0.00 0.00 0.00 5.19
4605 5205 1.065551 GGCCGTGTTATGGAAATCAGC 59.934 52.381 0.00 0.00 0.00 4.26
4617 5217 4.009675 TGGAAATCAGCAATAAAGCGAGT 58.990 39.130 0.00 0.00 40.15 4.18
4618 5218 4.142622 TGGAAATCAGCAATAAAGCGAGTG 60.143 41.667 0.00 0.00 40.15 3.51
4619 5219 3.411415 AATCAGCAATAAAGCGAGTGC 57.589 42.857 1.25 1.25 40.66 4.40
4629 5229 1.726853 AAGCGAGTGCATTCTGGTAC 58.273 50.000 7.68 0.00 46.23 3.34
4634 5234 4.524714 AGCGAGTGCATTCTGGTACTATAT 59.475 41.667 7.68 0.00 46.23 0.86
4635 5235 5.710567 AGCGAGTGCATTCTGGTACTATATA 59.289 40.000 7.68 0.00 46.23 0.86
4636 5236 6.030849 GCGAGTGCATTCTGGTACTATATAG 58.969 44.000 8.27 8.27 42.15 1.31
4637 5237 6.349445 GCGAGTGCATTCTGGTACTATATAGT 60.349 42.308 19.07 19.07 42.15 2.12
4638 5238 7.148289 GCGAGTGCATTCTGGTACTATATAGTA 60.148 40.741 17.03 17.03 42.15 1.82
4651 5251 5.814481 ACTATATAGTACTCCCTCCGTTCC 58.186 45.833 13.88 0.00 34.13 3.62
4652 5252 5.551189 ACTATATAGTACTCCCTCCGTTCCT 59.449 44.000 13.88 0.00 34.13 3.36
4653 5253 6.732862 ACTATATAGTACTCCCTCCGTTCCTA 59.267 42.308 13.88 0.00 34.13 2.94
4654 5254 4.803329 ATAGTACTCCCTCCGTTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
4655 5255 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
4656 5256 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
4657 5257 3.705072 AGTACTCCCTCCGTTCCTAAATG 59.295 47.826 0.00 0.00 0.00 2.32
4658 5258 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
4659 5259 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
4660 5260 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
4661 5261 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
4662 5262 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
4663 5263 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
4664 5264 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
4665 5265 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
4666 5266 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
4667 5267 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
4668 5268 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
4669 5269 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
4670 5270 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
4671 5271 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
4672 5272 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
4673 5273 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
4691 5291 7.768807 GTAGAGATTCTACTATGGACCACAT 57.231 40.000 0.00 0.00 44.45 3.21
4692 5292 8.865420 GTAGAGATTCTACTATGGACCACATA 57.135 38.462 0.00 0.00 44.45 2.29
4693 5293 7.768807 AGAGATTCTACTATGGACCACATAC 57.231 40.000 0.00 0.00 41.03 2.39
4694 5294 6.431543 AGAGATTCTACTATGGACCACATACG 59.568 42.308 0.00 0.00 41.03 3.06
4695 5295 5.477291 AGATTCTACTATGGACCACATACGG 59.523 44.000 0.00 0.00 41.03 4.02
4696 5296 4.442401 TCTACTATGGACCACATACGGA 57.558 45.455 0.00 0.00 41.03 4.69
4697 5297 4.994282 TCTACTATGGACCACATACGGAT 58.006 43.478 0.00 0.00 41.03 4.18
4698 5298 4.765339 TCTACTATGGACCACATACGGATG 59.235 45.833 5.94 5.94 41.03 3.51
4700 5300 4.476297 ACTATGGACCACATACGGATGTA 58.524 43.478 14.23 0.00 44.82 2.29
4701 5301 5.084519 ACTATGGACCACATACGGATGTAT 58.915 41.667 14.23 4.48 44.82 2.29
4702 5302 6.250711 ACTATGGACCACATACGGATGTATA 58.749 40.000 14.23 6.48 44.82 1.47
4703 5303 6.895756 ACTATGGACCACATACGGATGTATAT 59.104 38.462 14.23 1.16 44.82 0.86
4704 5304 8.057011 ACTATGGACCACATACGGATGTATATA 58.943 37.037 14.23 7.10 44.82 0.86
4705 5305 6.769134 TGGACCACATACGGATGTATATAG 57.231 41.667 14.23 0.00 44.82 1.31
4706 5306 6.486941 TGGACCACATACGGATGTATATAGA 58.513 40.000 14.23 0.00 44.82 1.98
4707 5307 7.123383 TGGACCACATACGGATGTATATAGAT 58.877 38.462 14.23 0.00 44.82 1.98
4708 5308 7.068226 TGGACCACATACGGATGTATATAGATG 59.932 40.741 14.23 0.00 44.82 2.90
4709 5309 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
4710 5310 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
4711 5311 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
4712 5312 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
4713 5313 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
4714 5314 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
4718 5318 9.809096 ACGGATGTATATAGATGCATTTTAGAG 57.191 33.333 11.19 0.00 38.38 2.43
4719 5319 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
4729 5329 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
4730 5330 6.985188 TGCATTTTAGAGTGTAGATTCACC 57.015 37.500 0.00 0.00 38.91 4.02
4731 5331 5.880332 TGCATTTTAGAGTGTAGATTCACCC 59.120 40.000 0.00 0.00 38.91 4.61
4732 5332 5.880332 GCATTTTAGAGTGTAGATTCACCCA 59.120 40.000 0.00 0.00 38.91 4.51
4733 5333 6.543831 GCATTTTAGAGTGTAGATTCACCCAT 59.456 38.462 0.00 0.00 38.91 4.00
4734 5334 7.067494 GCATTTTAGAGTGTAGATTCACCCATT 59.933 37.037 0.00 0.00 38.91 3.16
4735 5335 8.960591 CATTTTAGAGTGTAGATTCACCCATTT 58.039 33.333 0.00 0.00 38.91 2.32
4736 5336 8.934023 TTTTAGAGTGTAGATTCACCCATTTT 57.066 30.769 0.00 0.00 38.91 1.82
4737 5337 7.921786 TTAGAGTGTAGATTCACCCATTTTG 57.078 36.000 0.00 0.00 38.91 2.44
4738 5338 4.702131 AGAGTGTAGATTCACCCATTTTGC 59.298 41.667 0.00 0.00 38.91 3.68
4739 5339 4.666512 AGTGTAGATTCACCCATTTTGCT 58.333 39.130 0.00 0.00 38.91 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.511028 GCTTATATAAGATACCAGAGCCCCTAT 59.489 40.741 23.84 0.00 35.33 2.57
49 50 4.715297 ACCCCGGCTTATATAAGATACCAG 59.285 45.833 23.84 9.51 35.33 4.00
59 60 0.542232 AGCTCGACCCCGGCTTATAT 60.542 55.000 0.00 0.00 38.51 0.86
66 67 3.905678 CAGCTAGCTCGACCCCGG 61.906 72.222 16.15 0.00 36.24 5.73
82 83 8.774546 ACCTAGAGATTCTGATTTGTCTATCA 57.225 34.615 0.00 0.00 33.66 2.15
114 115 4.577875 CGGTTGGGGTGTACAAAGTATAA 58.422 43.478 0.00 0.00 0.00 0.98
160 193 5.878669 GGGGAAACACGAGACAATATTTACT 59.121 40.000 0.00 0.00 0.00 2.24
204 237 4.503991 GGATTCTGATGGTATGGTGTCTCC 60.504 50.000 0.00 0.00 0.00 3.71
227 260 1.730501 ATGCACCATTCGTCAGAGTG 58.269 50.000 0.00 0.00 34.34 3.51
341 374 7.149307 GGATTTGTGGAATTCTAAAAACCGAA 58.851 34.615 9.14 0.00 0.00 4.30
412 448 8.603181 ACGTAGTCAATTGTTTACGTTTTTAGT 58.397 29.630 27.92 14.51 46.83 2.24
413 449 8.976715 ACGTAGTCAATTGTTTACGTTTTTAG 57.023 30.769 27.92 12.60 46.83 1.85
434 470 4.273724 TGCTGTGAAATAAGCACAAACGTA 59.726 37.500 0.00 0.00 44.26 3.57
456 512 6.314018 TCTTTGTGAAATATAAGCAGCGTTG 58.686 36.000 0.00 0.00 0.00 4.10
457 513 6.494893 TCTTTGTGAAATATAAGCAGCGTT 57.505 33.333 0.00 0.00 0.00 4.84
458 514 6.094048 ACATCTTTGTGAAATATAAGCAGCGT 59.906 34.615 0.00 0.00 33.85 5.07
459 515 6.489675 ACATCTTTGTGAAATATAAGCAGCG 58.510 36.000 0.00 0.00 33.85 5.18
460 516 6.914757 GGACATCTTTGTGAAATATAAGCAGC 59.085 38.462 0.00 0.00 35.79 5.25
461 517 7.988737 TGGACATCTTTGTGAAATATAAGCAG 58.011 34.615 0.00 0.00 35.79 4.24
462 518 7.936496 TGGACATCTTTGTGAAATATAAGCA 57.064 32.000 0.00 0.00 35.79 3.91
463 519 9.884465 GTATGGACATCTTTGTGAAATATAAGC 57.116 33.333 0.00 0.00 35.79 3.09
465 521 8.556194 GCGTATGGACATCTTTGTGAAATATAA 58.444 33.333 0.00 0.00 35.79 0.98
466 522 7.095816 CGCGTATGGACATCTTTGTGAAATATA 60.096 37.037 0.00 0.00 35.79 0.86
467 523 6.292865 CGCGTATGGACATCTTTGTGAAATAT 60.293 38.462 0.00 0.00 35.79 1.28
468 524 5.006261 CGCGTATGGACATCTTTGTGAAATA 59.994 40.000 0.00 0.00 35.79 1.40
469 525 4.201812 CGCGTATGGACATCTTTGTGAAAT 60.202 41.667 0.00 0.00 35.79 2.17
470 526 3.124466 CGCGTATGGACATCTTTGTGAAA 59.876 43.478 0.00 0.00 35.79 2.69
471 527 2.670905 CGCGTATGGACATCTTTGTGAA 59.329 45.455 0.00 0.00 35.79 3.18
472 528 2.267426 CGCGTATGGACATCTTTGTGA 58.733 47.619 0.00 0.00 35.79 3.58
473 529 1.999735 ACGCGTATGGACATCTTTGTG 59.000 47.619 11.67 0.00 35.79 3.33
474 530 2.268298 GACGCGTATGGACATCTTTGT 58.732 47.619 13.97 0.00 39.32 2.83
475 531 1.593006 GGACGCGTATGGACATCTTTG 59.407 52.381 13.97 0.00 0.00 2.77
476 532 1.206132 TGGACGCGTATGGACATCTTT 59.794 47.619 13.97 0.00 0.00 2.52
479 535 2.717580 TATGGACGCGTATGGACATC 57.282 50.000 13.97 0.00 0.00 3.06
498 554 6.712241 CGCATATCGGATTCTAGAAACATT 57.288 37.500 9.71 0.00 33.78 2.71
528 859 5.305585 CCTACACATATTAAGCCAATCCGT 58.694 41.667 0.00 0.00 0.00 4.69
534 865 4.080582 ACACAGCCTACACATATTAAGCCA 60.081 41.667 0.00 0.00 0.00 4.75
543 874 1.280133 AGCATCACACAGCCTACACAT 59.720 47.619 0.00 0.00 0.00 3.21
547 878 1.734465 GTTCAGCATCACACAGCCTAC 59.266 52.381 0.00 0.00 0.00 3.18
559 890 3.887716 GCCTGAGGATTATTGTTCAGCAT 59.112 43.478 0.65 0.00 36.57 3.79
570 901 5.577100 ACGGTAGTATATGCCTGAGGATTA 58.423 41.667 0.65 0.00 0.00 1.75
571 902 4.417437 ACGGTAGTATATGCCTGAGGATT 58.583 43.478 0.65 0.00 0.00 3.01
572 903 4.048970 ACGGTAGTATATGCCTGAGGAT 57.951 45.455 0.65 0.00 0.00 3.24
573 904 3.520691 ACGGTAGTATATGCCTGAGGA 57.479 47.619 0.65 0.00 0.00 3.71
574 905 3.572682 TGAACGGTAGTATATGCCTGAGG 59.427 47.826 0.00 0.00 0.00 3.86
578 909 3.514309 GGGATGAACGGTAGTATATGCCT 59.486 47.826 0.00 0.00 34.11 4.75
595 927 3.803082 CACGCAACGGCTGGGATG 61.803 66.667 10.21 0.00 40.40 3.51
620 952 3.370978 CGCACTTCGTGAAATTATGGTCT 59.629 43.478 0.00 0.00 35.23 3.85
783 1115 2.113774 TGGTTGCAGGCAGGACAG 59.886 61.111 0.00 0.00 0.00 3.51
803 1135 6.116806 TGGTGTACTTTGCTCTTGTTTAAGA 58.883 36.000 0.00 0.00 40.53 2.10
824 1157 4.742201 CACCGCTGCTACGCTGGT 62.742 66.667 0.00 0.00 37.31 4.00
926 1260 1.315981 TGTGCCTGGCTCTAGTCGAG 61.316 60.000 21.03 0.00 42.88 4.04
994 1328 2.158505 CCATCATCTTGCCCATCCTCTT 60.159 50.000 0.00 0.00 0.00 2.85
1001 1335 4.342427 GCACCATCATCTTGCCCA 57.658 55.556 0.00 0.00 0.00 5.36
1101 1435 1.270839 CGAAGAGGGGAGTTGAGCAAA 60.271 52.381 0.00 0.00 0.00 3.68
1108 1442 0.545548 AGAAGGCGAAGAGGGGAGTT 60.546 55.000 0.00 0.00 0.00 3.01
1130 1464 4.087892 CTCTGACCAGGGCACGGG 62.088 72.222 2.52 2.52 38.01 5.28
1138 1472 1.018226 CGCCAAAGCTCTCTGACCAG 61.018 60.000 0.00 0.00 36.60 4.00
1166 1501 2.205074 CCTGATTTAGCTGTACGGCTG 58.795 52.381 34.54 18.77 43.01 4.85
1173 1508 5.378230 TCATGAATCCCTGATTTAGCTGT 57.622 39.130 0.00 0.00 31.89 4.40
1262 1609 0.901124 ACCTGCAGAGAAGCGAAGAT 59.099 50.000 17.39 0.00 37.31 2.40
1294 1641 1.461911 GCCCGAGTATAAGCCGTCCT 61.462 60.000 0.00 0.00 0.00 3.85
1360 1707 0.530870 GGTAGCAGAAGACGATGGCC 60.531 60.000 0.00 0.00 0.00 5.36
1531 1878 3.448301 CCAGCCATTGTGATTATTGTGGT 59.552 43.478 0.00 0.00 0.00 4.16
1564 1911 2.768527 CTCAGGTCTGAAGGCTGGAATA 59.231 50.000 2.13 0.00 39.39 1.75
1603 1950 3.499537 GGAATCGTAAGTTTGAAACCCGT 59.500 43.478 4.14 0.00 39.48 5.28
1604 1951 3.499157 TGGAATCGTAAGTTTGAAACCCG 59.501 43.478 4.14 5.35 39.48 5.28
1660 2007 1.411977 TGGCAAACATCACAAGGGTTG 59.588 47.619 0.00 0.00 0.00 3.77
1744 2094 2.597510 GGCGGGGCTCTTGTGTTT 60.598 61.111 0.00 0.00 0.00 2.83
1795 2145 2.060980 GCTCCACTCCATCGAGGGT 61.061 63.158 16.92 0.00 37.90 4.34
1798 2148 1.064946 GACGCTCCACTCCATCGAG 59.935 63.158 0.00 0.00 42.32 4.04
1801 2151 2.105128 CCGACGCTCCACTCCATC 59.895 66.667 0.00 0.00 0.00 3.51
1846 2196 3.755112 TTCACGTTGACATCCTTGGTA 57.245 42.857 0.00 0.00 0.00 3.25
1876 2226 2.288666 TCGCAAAACTTGAGCTTCACT 58.711 42.857 0.00 0.00 0.00 3.41
2029 2379 7.496346 TTCTATATGGCTAATGGTAGGGAAG 57.504 40.000 0.00 0.00 0.00 3.46
2122 2472 0.394565 CTCTCTTCCCGGCCCTTATG 59.605 60.000 0.00 0.00 0.00 1.90
2123 2473 0.264955 TCTCTCTTCCCGGCCCTTAT 59.735 55.000 0.00 0.00 0.00 1.73
2128 2478 1.524849 GCATTCTCTCTTCCCGGCC 60.525 63.158 0.00 0.00 0.00 6.13
2132 2482 2.795329 TGTTTGGCATTCTCTCTTCCC 58.205 47.619 0.00 0.00 0.00 3.97
2144 2494 5.897050 ACTTTTACGAAAGAATGTTTGGCA 58.103 33.333 5.95 0.00 44.03 4.92
2146 2496 6.500041 TGGACTTTTACGAAAGAATGTTTGG 58.500 36.000 5.95 0.00 44.03 3.28
2153 2503 5.286267 AGGTCTGGACTTTTACGAAAGAA 57.714 39.130 5.95 0.00 44.03 2.52
2188 2545 7.702348 CTGAAAGAAAACCAAGAGGTGTTTAAG 59.298 37.037 0.00 0.00 45.61 1.85
2193 2550 4.399303 CACTGAAAGAAAACCAAGAGGTGT 59.601 41.667 0.00 0.00 43.15 4.16
2202 2559 6.255670 CCTTAACTTTGCACTGAAAGAAAACC 59.744 38.462 2.92 0.00 36.58 3.27
2252 2609 5.869649 AGCCCAAGTGTAAATGTCTTTTT 57.130 34.783 0.00 0.00 0.00 1.94
2259 2616 5.473504 ACAACTCTAAGCCCAAGTGTAAATG 59.526 40.000 0.00 0.00 0.00 2.32
2267 2624 4.642429 ACTGTTACAACTCTAAGCCCAAG 58.358 43.478 0.00 0.00 0.00 3.61
2274 2631 9.533253 GGTTTTGTAGTACTGTTACAACTCTAA 57.467 33.333 5.39 0.00 39.86 2.10
2275 2632 8.917088 AGGTTTTGTAGTACTGTTACAACTCTA 58.083 33.333 5.39 0.00 39.86 2.43
2276 2633 7.789026 AGGTTTTGTAGTACTGTTACAACTCT 58.211 34.615 5.39 3.50 39.86 3.24
2277 2634 8.429493 AAGGTTTTGTAGTACTGTTACAACTC 57.571 34.615 5.39 4.30 39.86 3.01
2278 2635 8.797350 AAAGGTTTTGTAGTACTGTTACAACT 57.203 30.769 5.39 0.00 39.86 3.16
2279 2636 8.886719 AGAAAGGTTTTGTAGTACTGTTACAAC 58.113 33.333 5.39 2.30 39.86 3.32
2360 2717 7.041508 CCTGCAAATCTAGTCAGATAATGGAAC 60.042 40.741 0.00 0.00 40.81 3.62
2403 2760 7.012327 CAGGACTTAGTTCACAAATCTGTTTGA 59.988 37.037 7.79 0.00 46.03 2.69
2476 2834 2.091720 TGATTATGATGGGCCAACTGCT 60.092 45.455 11.89 0.00 40.92 4.24
2504 2862 4.881920 TCCTCTGCAAGGCAAATAAAAAC 58.118 39.130 9.35 0.00 45.78 2.43
2525 2883 4.807443 ACAGAAAGAAGTAGCGGTAGTTC 58.193 43.478 27.12 27.12 38.45 3.01
2531 2889 3.304559 CGATGAACAGAAAGAAGTAGCGG 59.695 47.826 0.00 0.00 0.00 5.52
2546 2904 1.290203 ATGTCGATGTGGCGATGAAC 58.710 50.000 0.00 0.00 42.82 3.18
2570 2928 7.857734 TGAAAAGATTAAGACGGATATGCAA 57.142 32.000 0.00 0.00 0.00 4.08
2606 2964 1.163420 TGTCTTGCATTTCGCCGTGT 61.163 50.000 0.00 0.00 41.33 4.49
2630 2988 0.267356 AGGCCTTCCAGATAGAGCCT 59.733 55.000 0.00 0.00 45.72 4.58
2711 3069 1.250154 GCAATGCTGTTAGGCCACCA 61.250 55.000 5.01 0.00 0.00 4.17
2725 3083 7.604549 AGTACTGATCAGATAGAGATGCAATG 58.395 38.462 29.27 0.00 0.00 2.82
2761 3119 6.790285 AATTGCAGCAAAAGGAAGTAAATG 57.210 33.333 12.97 0.00 0.00 2.32
2767 3125 8.650714 GTTATCTAAAATTGCAGCAAAAGGAAG 58.349 33.333 12.97 6.72 0.00 3.46
2811 3172 8.556194 CAAGTGCATTACTTCAGTTACAGTTAA 58.444 33.333 0.00 0.00 46.55 2.01
2847 3208 8.807118 CAAGAGATTAGGCCTATGAGTATTGTA 58.193 37.037 14.74 0.00 0.00 2.41
2862 3223 4.376146 GGCAGCTAGTTCAAGAGATTAGG 58.624 47.826 0.00 0.00 0.00 2.69
2884 3245 3.700038 GTCCCTCCGTCATAGTATATGGG 59.300 52.174 0.00 0.00 0.00 4.00
2893 3254 2.241281 TTTCCTGTCCCTCCGTCATA 57.759 50.000 0.00 0.00 0.00 2.15
2898 3259 1.003118 TCACATTTTCCTGTCCCTCCG 59.997 52.381 0.00 0.00 0.00 4.63
2941 3302 7.458409 ACTCACATTTTCATGCTGTTTCTAT 57.542 32.000 0.00 0.00 33.05 1.98
2952 3313 3.259123 GGGCAGGAAACTCACATTTTCAT 59.741 43.478 0.00 0.00 40.21 2.57
3002 3363 8.294954 TGGTTGGTCTTTAGTTAACATTTTCA 57.705 30.769 8.61 0.00 0.00 2.69
3008 3369 9.675464 CCTTATATGGTTGGTCTTTAGTTAACA 57.325 33.333 8.61 0.00 0.00 2.41
3009 3370 9.895138 TCCTTATATGGTTGGTCTTTAGTTAAC 57.105 33.333 0.00 0.00 0.00 2.01
3010 3371 9.895138 GTCCTTATATGGTTGGTCTTTAGTTAA 57.105 33.333 4.67 0.00 0.00 2.01
3011 3372 8.199449 CGTCCTTATATGGTTGGTCTTTAGTTA 58.801 37.037 4.67 0.00 0.00 2.24
3012 3373 7.046033 CGTCCTTATATGGTTGGTCTTTAGTT 58.954 38.462 4.67 0.00 0.00 2.24
3013 3374 6.155737 ACGTCCTTATATGGTTGGTCTTTAGT 59.844 38.462 4.67 0.00 0.00 2.24
3014 3375 6.479001 CACGTCCTTATATGGTTGGTCTTTAG 59.521 42.308 4.67 0.00 0.00 1.85
3015 3376 6.154877 TCACGTCCTTATATGGTTGGTCTTTA 59.845 38.462 4.67 0.00 0.00 1.85
3016 3377 5.046159 TCACGTCCTTATATGGTTGGTCTTT 60.046 40.000 4.67 0.00 0.00 2.52
3017 3378 4.468510 TCACGTCCTTATATGGTTGGTCTT 59.531 41.667 4.67 0.00 0.00 3.01
3018 3379 4.028131 TCACGTCCTTATATGGTTGGTCT 58.972 43.478 4.67 0.00 0.00 3.85
3019 3380 4.142004 ACTCACGTCCTTATATGGTTGGTC 60.142 45.833 4.67 0.00 0.00 4.02
3020 3381 3.773119 ACTCACGTCCTTATATGGTTGGT 59.227 43.478 4.67 0.00 0.00 3.67
3021 3382 4.119862 CACTCACGTCCTTATATGGTTGG 58.880 47.826 4.67 0.00 0.00 3.77
3022 3383 4.755411 ACACTCACGTCCTTATATGGTTG 58.245 43.478 4.67 1.94 0.00 3.77
3023 3384 6.726490 ATACACTCACGTCCTTATATGGTT 57.274 37.500 4.67 0.00 0.00 3.67
3027 3388 8.038944 ACAAACAATACACTCACGTCCTTATAT 58.961 33.333 0.00 0.00 0.00 0.86
3112 3473 8.849168 TGATATCAGTAAAATTATGCAAGGGTG 58.151 33.333 0.00 0.00 0.00 4.61
3114 3475 9.683069 GTTGATATCAGTAAAATTATGCAAGGG 57.317 33.333 5.39 0.00 0.00 3.95
3277 3638 1.003118 GCACCCTCACCTACATGTGAA 59.997 52.381 9.11 0.00 44.19 3.18
3301 3662 1.903183 GGAGTGTAGAACCCAGCTTCT 59.097 52.381 0.00 0.00 34.72 2.85
3345 3706 5.415701 TCTGTATCAATCTTTTCCCTTGTGC 59.584 40.000 0.00 0.00 0.00 4.57
3346 3707 7.636150 ATCTGTATCAATCTTTTCCCTTGTG 57.364 36.000 0.00 0.00 0.00 3.33
3382 3743 0.685458 TGCCCCCTACGAGTACTTCC 60.685 60.000 0.00 0.00 0.00 3.46
3400 3761 6.539826 TCTGCAATACTGTTGGAATCTGTATG 59.460 38.462 0.00 0.00 32.90 2.39
3455 3816 6.348786 CCATTGTTCCTGTTCTTGTCATACAG 60.349 42.308 0.00 0.00 39.13 2.74
3457 3818 5.619981 GCCATTGTTCCTGTTCTTGTCATAC 60.620 44.000 0.00 0.00 0.00 2.39
3565 3926 4.342951 TCGTCCTCACTTGTTTCTTCCTTA 59.657 41.667 0.00 0.00 0.00 2.69
3577 3938 2.457598 TCCTTAGCATCGTCCTCACTT 58.542 47.619 0.00 0.00 0.00 3.16
3603 3964 5.565259 CGTGCAGAACTTGTATTTGAATCAC 59.435 40.000 0.00 0.00 0.00 3.06
3605 3966 5.088739 CCGTGCAGAACTTGTATTTGAATC 58.911 41.667 0.00 0.00 0.00 2.52
3622 3983 1.404181 GCTTCTGTAGATGTCCGTGCA 60.404 52.381 0.00 0.00 0.00 4.57
3649 4010 7.841729 TCCTGAACTATTTCTTCCTCAGATACT 59.158 37.037 0.00 0.00 33.65 2.12
3650 4011 7.923878 GTCCTGAACTATTTCTTCCTCAGATAC 59.076 40.741 0.00 0.00 33.65 2.24
3661 4022 4.744795 AGCATCGTCCTGAACTATTTCT 57.255 40.909 0.00 0.00 32.36 2.52
3690 4051 5.583495 CGGAACTTCTATCTGGAGTGTTAG 58.417 45.833 0.00 0.00 0.00 2.34
3697 4058 1.120530 GGGCGGAACTTCTATCTGGA 58.879 55.000 0.00 0.00 0.00 3.86
3710 4071 1.125093 TCTTTCAAGGACTGGGCGGA 61.125 55.000 0.00 0.00 0.00 5.54
3746 4107 7.719483 ACAAATTCCCAAACATATATGAGCAG 58.281 34.615 19.63 6.08 0.00 4.24
3747 4108 7.560991 AGACAAATTCCCAAACATATATGAGCA 59.439 33.333 19.63 0.00 0.00 4.26
3762 4123 6.599638 GTGGCCATATCTATAGACAAATTCCC 59.400 42.308 9.72 1.23 0.00 3.97
3814 4175 4.884164 GTCCTGCACTTGCCTTTTCTATAT 59.116 41.667 0.00 0.00 41.18 0.86
3934 4300 0.108520 CATGCAAGGTCAACATGCCC 60.109 55.000 0.00 0.00 39.31 5.36
3954 4320 5.703130 ACTCTTTCTTGCTATGTCAACTTCC 59.297 40.000 0.00 0.00 0.00 3.46
3955 4321 6.793492 ACTCTTTCTTGCTATGTCAACTTC 57.207 37.500 0.00 0.00 0.00 3.01
3992 4361 9.605275 TTACTAAGTCAGGAATGAATTCATCAG 57.395 33.333 20.95 11.20 42.53 2.90
4003 4372 6.069963 ACCTGCTTCATTACTAAGTCAGGAAT 60.070 38.462 21.95 0.00 43.45 3.01
4004 4373 5.248477 ACCTGCTTCATTACTAAGTCAGGAA 59.752 40.000 21.95 6.17 43.45 3.36
4005 4374 4.777896 ACCTGCTTCATTACTAAGTCAGGA 59.222 41.667 21.95 0.00 43.45 3.86
4006 4375 5.091261 ACCTGCTTCATTACTAAGTCAGG 57.909 43.478 17.24 17.24 44.71 3.86
4007 4376 5.724328 TGACCTGCTTCATTACTAAGTCAG 58.276 41.667 0.00 0.00 32.58 3.51
4008 4377 5.480422 TCTGACCTGCTTCATTACTAAGTCA 59.520 40.000 0.00 0.00 0.00 3.41
4009 4378 5.967088 TCTGACCTGCTTCATTACTAAGTC 58.033 41.667 0.00 0.00 0.00 3.01
4010 4379 6.155221 TCATCTGACCTGCTTCATTACTAAGT 59.845 38.462 0.00 0.00 0.00 2.24
4011 4380 6.577103 TCATCTGACCTGCTTCATTACTAAG 58.423 40.000 0.00 0.00 0.00 2.18
4012 4381 6.544928 TCATCTGACCTGCTTCATTACTAA 57.455 37.500 0.00 0.00 0.00 2.24
4013 4382 6.737720 ATCATCTGACCTGCTTCATTACTA 57.262 37.500 0.00 0.00 0.00 1.82
4014 4383 5.627182 ATCATCTGACCTGCTTCATTACT 57.373 39.130 0.00 0.00 0.00 2.24
4015 4384 8.930760 GTTATATCATCTGACCTGCTTCATTAC 58.069 37.037 0.00 0.00 0.00 1.89
4016 4385 8.097038 GGTTATATCATCTGACCTGCTTCATTA 58.903 37.037 0.00 0.00 0.00 1.90
4017 4386 6.939163 GGTTATATCATCTGACCTGCTTCATT 59.061 38.462 0.00 0.00 0.00 2.57
4018 4387 6.043590 TGGTTATATCATCTGACCTGCTTCAT 59.956 38.462 0.00 0.00 0.00 2.57
4019 4388 5.366477 TGGTTATATCATCTGACCTGCTTCA 59.634 40.000 0.00 0.00 0.00 3.02
4020 4389 5.858381 TGGTTATATCATCTGACCTGCTTC 58.142 41.667 0.00 0.00 0.00 3.86
4091 4664 2.999331 TGGTAGGTTGCTCCTTTATGC 58.001 47.619 6.36 0.00 45.67 3.14
4094 4667 6.544650 TGTTTTATGGTAGGTTGCTCCTTTA 58.455 36.000 6.36 0.00 45.67 1.85
4114 4687 9.107177 TGTAATTTGCACAAATCTGAATTGTTT 57.893 25.926 8.33 3.60 39.88 2.83
4146 4719 5.762825 AAGTTATGTGCATCCATCATGTC 57.237 39.130 0.00 0.00 34.56 3.06
4180 4753 0.099436 GTTCCATGGCGTCTGCATTC 59.901 55.000 6.96 0.00 45.35 2.67
4182 4755 0.608856 TTGTTCCATGGCGTCTGCAT 60.609 50.000 6.96 0.00 45.35 3.96
4183 4756 1.228094 TTGTTCCATGGCGTCTGCA 60.228 52.632 6.96 0.00 45.35 4.41
4226 4823 5.448654 TCCCAATAATGAGCAGTAGCATTT 58.551 37.500 0.00 0.00 45.49 2.32
4232 4829 5.897250 TGTACTCTCCCAATAATGAGCAGTA 59.103 40.000 0.00 0.00 0.00 2.74
4237 4834 5.295950 CAGCTGTACTCTCCCAATAATGAG 58.704 45.833 5.25 0.00 0.00 2.90
4240 4837 3.713764 AGCAGCTGTACTCTCCCAATAAT 59.286 43.478 16.64 0.00 0.00 1.28
4269 4867 1.508632 TTGGACAGTTTAGCGTGCTC 58.491 50.000 0.00 0.00 0.00 4.26
4283 4883 8.931775 AGTTACAAAATTTCAGTTGTTTTGGAC 58.068 29.630 12.61 10.56 43.52 4.02
4288 4888 7.277760 GCCTGAGTTACAAAATTTCAGTTGTTT 59.722 33.333 0.00 0.00 38.80 2.83
4297 4897 7.538303 CAACTTTGCCTGAGTTACAAAATTT 57.462 32.000 0.00 0.00 35.68 1.82
4344 4944 0.035630 CCAGTCTTGAGAGCTTGGGG 60.036 60.000 0.00 0.00 0.00 4.96
4359 4959 2.499289 CAGCTTCCAGATGTCTACCAGT 59.501 50.000 0.00 0.00 0.00 4.00
4507 5107 0.962356 CCCTCGGCTTTTCATGCACT 60.962 55.000 0.00 0.00 0.00 4.40
4528 5128 3.990369 TCCTTGTAGTAGTGGGCATAGT 58.010 45.455 0.00 0.00 0.00 2.12
4534 5134 6.479972 TTATCACATCCTTGTAGTAGTGGG 57.520 41.667 0.00 0.00 33.76 4.61
4541 5141 8.554528 GTCATTCACATTATCACATCCTTGTAG 58.445 37.037 0.00 0.00 33.76 2.74
4587 5187 4.637483 ATTGCTGATTTCCATAACACGG 57.363 40.909 0.00 0.00 0.00 4.94
4588 5188 6.197096 GCTTTATTGCTGATTTCCATAACACG 59.803 38.462 0.00 0.00 0.00 4.49
4605 5205 3.127548 ACCAGAATGCACTCGCTTTATTG 59.872 43.478 0.00 0.00 39.64 1.90
4629 5229 6.064735 AGGAACGGAGGGAGTACTATATAG 57.935 45.833 8.27 8.27 0.00 1.31
4634 5234 4.591321 TTTAGGAACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 0.00 1.82
4635 5235 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
4636 5236 3.450096 ACATTTAGGAACGGAGGGAGTAC 59.550 47.826 0.00 0.00 0.00 2.73
4637 5237 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
4638 5238 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
4639 5239 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
4640 5240 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4641 5241 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
4642 5242 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
4643 5243 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
4644 5244 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
4645 5245 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
4646 5246 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
4647 5247 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
4666 5266 8.445588 TATGTGGTCCATAGTAGAATCTCTACA 58.554 37.037 14.55 3.46 41.83 2.74
4667 5267 8.732531 GTATGTGGTCCATAGTAGAATCTCTAC 58.267 40.741 0.00 5.81 40.89 2.59
4668 5268 7.606839 CGTATGTGGTCCATAGTAGAATCTCTA 59.393 40.741 0.00 0.00 36.71 2.43
4669 5269 6.431543 CGTATGTGGTCCATAGTAGAATCTCT 59.568 42.308 0.00 0.00 36.71 3.10
4670 5270 6.349445 CCGTATGTGGTCCATAGTAGAATCTC 60.349 46.154 0.00 0.00 36.71 2.75
4671 5271 5.477291 CCGTATGTGGTCCATAGTAGAATCT 59.523 44.000 0.00 0.00 36.71 2.40
4672 5272 5.475909 TCCGTATGTGGTCCATAGTAGAATC 59.524 44.000 0.00 0.00 36.71 2.52
4673 5273 5.391256 TCCGTATGTGGTCCATAGTAGAAT 58.609 41.667 0.00 0.00 36.71 2.40
4674 5274 4.795469 TCCGTATGTGGTCCATAGTAGAA 58.205 43.478 0.00 0.00 36.71 2.10
4675 5275 4.442401 TCCGTATGTGGTCCATAGTAGA 57.558 45.455 0.00 0.00 36.71 2.59
4676 5276 4.523173 ACATCCGTATGTGGTCCATAGTAG 59.477 45.833 0.00 0.00 44.79 2.57
4677 5277 4.476297 ACATCCGTATGTGGTCCATAGTA 58.524 43.478 0.00 0.00 44.79 1.82
4678 5278 3.305720 ACATCCGTATGTGGTCCATAGT 58.694 45.455 0.00 0.00 44.79 2.12
4679 5279 5.661056 ATACATCCGTATGTGGTCCATAG 57.339 43.478 3.56 0.00 45.99 2.23
4680 5280 8.276477 TCTATATACATCCGTATGTGGTCCATA 58.724 37.037 3.56 0.00 45.99 2.74
4681 5281 7.123383 TCTATATACATCCGTATGTGGTCCAT 58.877 38.462 3.56 0.00 45.99 3.41
4682 5282 6.486941 TCTATATACATCCGTATGTGGTCCA 58.513 40.000 3.56 0.00 45.99 4.02
4683 5283 7.426410 CATCTATATACATCCGTATGTGGTCC 58.574 42.308 3.56 0.00 45.99 4.46
4684 5284 6.918569 GCATCTATATACATCCGTATGTGGTC 59.081 42.308 3.56 0.00 45.99 4.02
4685 5285 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
4686 5286 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
4687 5287 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
4692 5292 9.809096 CTCTAAAATGCATCTATATACATCCGT 57.191 33.333 0.00 0.00 0.00 4.69
4693 5293 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
4703 5303 9.534565 GTGAATCTACACTCTAAAATGCATCTA 57.465 33.333 0.00 0.00 37.73 1.98
4704 5304 7.497249 GGTGAATCTACACTCTAAAATGCATCT 59.503 37.037 0.00 0.00 40.22 2.90
4705 5305 7.254932 GGGTGAATCTACACTCTAAAATGCATC 60.255 40.741 0.00 0.00 38.14 3.91
4706 5306 6.543831 GGGTGAATCTACACTCTAAAATGCAT 59.456 38.462 0.00 0.00 38.14 3.96
4707 5307 5.880332 GGGTGAATCTACACTCTAAAATGCA 59.120 40.000 0.00 0.00 38.14 3.96
4708 5308 5.880332 TGGGTGAATCTACACTCTAAAATGC 59.120 40.000 0.00 0.00 41.33 3.56
4709 5309 8.511604 AATGGGTGAATCTACACTCTAAAATG 57.488 34.615 0.00 0.00 41.33 2.32
4710 5310 9.533831 AAAATGGGTGAATCTACACTCTAAAAT 57.466 29.630 0.00 0.00 41.33 1.82
4711 5311 8.792633 CAAAATGGGTGAATCTACACTCTAAAA 58.207 33.333 0.00 0.00 41.33 1.52
4712 5312 7.094377 GCAAAATGGGTGAATCTACACTCTAAA 60.094 37.037 0.00 0.00 41.33 1.85
4713 5313 6.374333 GCAAAATGGGTGAATCTACACTCTAA 59.626 38.462 0.00 0.00 41.33 2.10
4714 5314 5.880332 GCAAAATGGGTGAATCTACACTCTA 59.120 40.000 0.00 0.00 41.33 2.43
4715 5315 4.702131 GCAAAATGGGTGAATCTACACTCT 59.298 41.667 0.00 0.00 41.33 3.24
4716 5316 4.702131 AGCAAAATGGGTGAATCTACACTC 59.298 41.667 0.00 0.00 41.16 3.51
4717 5317 4.666512 AGCAAAATGGGTGAATCTACACT 58.333 39.130 0.00 0.00 40.22 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.