Multiple sequence alignment - TraesCS5B01G136800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G136800 chr5B 100.000 3011 0 0 1 3011 256611778 256614788 0.000000e+00 5561.0
1 TraesCS5B01G136800 chr5B 80.717 223 34 7 2 220 231735535 231735752 6.680000e-37 165.0
2 TraesCS5B01G136800 chr5D 89.430 1192 72 22 137 1299 241840494 241841660 0.000000e+00 1454.0
3 TraesCS5B01G136800 chr5D 94.037 654 35 3 2362 3011 241844281 241844934 0.000000e+00 989.0
4 TraesCS5B01G136800 chr5D 89.358 592 35 7 1727 2290 241843488 241844079 0.000000e+00 719.0
5 TraesCS5B01G136800 chr5D 82.552 384 45 13 341 704 292644149 292644530 4.840000e-83 318.0
6 TraesCS5B01G136800 chr5D 81.579 380 48 15 349 709 422803562 422803938 8.160000e-76 294.0
7 TraesCS5B01G136800 chr5D 80.829 386 56 12 341 710 564930917 564931300 1.370000e-73 287.0
8 TraesCS5B01G136800 chr5D 89.333 150 12 2 1421 1570 241843346 241843491 5.130000e-43 185.0
9 TraesCS5B01G136800 chr5A 95.426 634 17 5 667 1297 311671129 311671753 0.000000e+00 1000.0
10 TraesCS5B01G136800 chr5A 93.607 657 35 4 2362 3011 311674015 311674671 0.000000e+00 974.0
11 TraesCS5B01G136800 chr5A 89.389 622 34 10 1727 2316 311673291 311673912 0.000000e+00 754.0
12 TraesCS5B01G136800 chr5A 83.240 358 29 9 229 578 311670746 311671080 1.750000e-77 300.0
13 TraesCS5B01G136800 chr5A 90.811 185 11 6 1557 1740 698500630 698500809 3.000000e-60 243.0
14 TraesCS5B01G136800 chr5A 90.000 150 11 2 1421 1570 311673149 311673294 1.100000e-44 191.0
15 TraesCS5B01G136800 chr2B 82.078 385 52 11 341 710 601433044 601432662 2.250000e-81 313.0
16 TraesCS5B01G136800 chr2B 81.221 213 29 7 10 220 692454990 692455193 8.640000e-36 161.0
17 TraesCS5B01G136800 chr6D 81.558 385 54 12 339 710 408686585 408686965 4.880000e-78 302.0
18 TraesCS5B01G136800 chr6D 80.000 370 60 13 341 704 312679827 312680188 8.280000e-66 261.0
19 TraesCS5B01G136800 chr6D 79.821 223 38 6 3 223 121810410 121810193 4.020000e-34 156.0
20 TraesCS5B01G136800 chr3B 81.606 386 52 10 341 708 399650853 399651237 4.880000e-78 302.0
21 TraesCS5B01G136800 chr3B 81.395 387 53 13 341 710 744599959 744600343 6.310000e-77 298.0
22 TraesCS5B01G136800 chr3B 94.512 164 9 0 1566 1729 697395159 697394996 1.390000e-63 254.0
23 TraesCS5B01G136800 chr3B 87.654 81 8 2 1 81 74529083 74529161 3.200000e-15 93.5
24 TraesCS5B01G136800 chr7D 81.102 381 45 14 341 710 195264528 195264164 2.290000e-71 279.0
25 TraesCS5B01G136800 chr7D 79.951 409 59 12 319 710 472923545 472923947 2.290000e-71 279.0
26 TraesCS5B01G136800 chr4A 92.697 178 13 0 1551 1728 329838548 329838371 1.070000e-64 257.0
27 TraesCS5B01G136800 chr4A 82.759 116 19 1 221 336 522955263 522955149 5.310000e-18 102.0
28 TraesCS5B01G136800 chr6B 92.308 182 11 3 1560 1738 601199427 601199608 3.850000e-64 255.0
29 TraesCS5B01G136800 chr3D 92.655 177 10 3 1554 1728 528190508 528190683 4.980000e-63 252.0
30 TraesCS5B01G136800 chr3D 76.471 357 49 12 341 687 84593933 84594264 8.640000e-36 161.0
31 TraesCS5B01G136800 chr3D 79.279 111 20 3 221 330 609292945 609293053 1.160000e-09 75.0
32 TraesCS5B01G136800 chr3A 90.761 184 13 4 1559 1739 745031193 745031375 3.000000e-60 243.0
33 TraesCS5B01G136800 chr3A 91.011 178 16 0 1551 1728 478426315 478426492 1.080000e-59 241.0
34 TraesCS5B01G136800 chr3A 83.898 118 16 3 221 337 207777530 207777415 3.170000e-20 110.0
35 TraesCS5B01G136800 chr3A 82.203 118 18 3 221 337 737435888 737435773 6.870000e-17 99.0
36 TraesCS5B01G136800 chr1A 90.556 180 17 0 1552 1731 282056103 282055924 3.880000e-59 239.0
37 TraesCS5B01G136800 chr1A 81.857 237 33 7 2 236 27192869 27192641 1.100000e-44 191.0
38 TraesCS5B01G136800 chr1A 85.714 119 14 3 220 337 265640784 265640900 4.080000e-24 122.0
39 TraesCS5B01G136800 chr1A 82.645 121 15 5 355 472 392787255 392787372 5.310000e-18 102.0
40 TraesCS5B01G136800 chr2A 89.785 186 18 1 1551 1735 573679154 573679339 1.400000e-58 237.0
41 TraesCS5B01G136800 chr2A 88.750 80 7 1 2 81 1502027 1501950 2.470000e-16 97.1
42 TraesCS5B01G136800 chr2A 88.608 79 7 1 2 80 729555203 729555127 8.890000e-16 95.3
43 TraesCS5B01G136800 chr7A 81.588 277 39 6 377 646 49595781 49596052 5.050000e-53 219.0
44 TraesCS5B01G136800 chr1B 84.360 211 25 6 12 220 1279017 1279221 1.830000e-47 200.0
45 TraesCS5B01G136800 chr1B 86.207 174 18 4 43 214 1291714 1291883 1.840000e-42 183.0
46 TraesCS5B01G136800 chr1B 82.547 212 26 8 12 220 1271901 1272104 3.080000e-40 176.0
47 TraesCS5B01G136800 chr1B 83.333 180 24 4 43 220 1346276 1346451 8.640000e-36 161.0
48 TraesCS5B01G136800 chr1B 83.333 180 24 4 43 220 1369827 1370002 8.640000e-36 161.0
49 TraesCS5B01G136800 chr2D 77.089 371 51 18 341 700 367917854 367918201 1.840000e-42 183.0
50 TraesCS5B01G136800 chr4D 83.168 101 9 5 340 432 16052268 16052168 5.350000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G136800 chr5B 256611778 256614788 3010 False 5561.00 5561 100.0000 1 3011 1 chr5B.!!$F2 3010
1 TraesCS5B01G136800 chr5D 241840494 241844934 4440 False 836.75 1454 90.5395 137 3011 4 chr5D.!!$F4 2874
2 TraesCS5B01G136800 chr5A 311670746 311674671 3925 False 643.80 1000 90.3324 229 3011 5 chr5A.!!$F2 2782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.031111 TGCTACCCCTATGAGCACCT 60.031 55.0 0.00 0.0 41.18 4.00 F
69 70 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.00 0.0 0.00 3.24 F
1636 3266 0.035739 ACGTACGGAGCAAAATGGGT 59.964 50.0 21.06 0.0 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1617 3247 0.035739 ACCCATTTTGCTCCGTACGT 59.964 50.0 15.21 0.0 0.0 3.57 R
1842 3472 0.311790 ACACAGTGCATGAAAAGCCG 59.688 50.0 0.00 0.0 0.0 5.52 R
2634 4503 0.035056 CCGCCCAGTCCTTGAAAGAT 60.035 55.0 0.00 0.0 0.0 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.387716 TGCGCATACACTCACCCT 58.612 55.556 5.66 0.00 0.00 4.34
18 19 1.676968 TGCGCATACACTCACCCTT 59.323 52.632 5.66 0.00 0.00 3.95
19 20 0.899019 TGCGCATACACTCACCCTTA 59.101 50.000 5.66 0.00 0.00 2.69
20 21 1.484653 TGCGCATACACTCACCCTTAT 59.515 47.619 5.66 0.00 0.00 1.73
21 22 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
22 23 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
23 24 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
24 25 3.804325 CGCATACACTCACCCTTATGAAG 59.196 47.826 0.00 0.00 0.00 3.02
25 26 4.441495 CGCATACACTCACCCTTATGAAGA 60.441 45.833 0.00 0.00 0.00 2.87
26 27 4.811557 GCATACACTCACCCTTATGAAGAC 59.188 45.833 0.00 0.00 0.00 3.01
27 28 5.626809 GCATACACTCACCCTTATGAAGACA 60.627 44.000 0.00 0.00 0.00 3.41
28 29 4.273148 ACACTCACCCTTATGAAGACAC 57.727 45.455 0.00 0.00 0.00 3.67
29 30 3.646162 ACACTCACCCTTATGAAGACACA 59.354 43.478 0.00 0.00 0.00 3.72
30 31 3.997021 CACTCACCCTTATGAAGACACAC 59.003 47.826 0.00 0.00 0.00 3.82
31 32 3.646162 ACTCACCCTTATGAAGACACACA 59.354 43.478 0.00 0.00 0.00 3.72
32 33 4.287067 ACTCACCCTTATGAAGACACACAT 59.713 41.667 0.00 0.00 0.00 3.21
33 34 5.483937 ACTCACCCTTATGAAGACACACATA 59.516 40.000 0.00 0.00 0.00 2.29
34 35 6.156949 ACTCACCCTTATGAAGACACACATAT 59.843 38.462 0.00 0.00 0.00 1.78
35 36 6.348498 TCACCCTTATGAAGACACACATATG 58.652 40.000 0.00 0.00 0.00 1.78
36 37 5.008019 CACCCTTATGAAGACACACATATGC 59.992 44.000 1.58 0.00 0.00 3.14
37 38 5.125356 CCCTTATGAAGACACACATATGCA 58.875 41.667 1.58 0.00 0.00 3.96
38 39 5.008019 CCCTTATGAAGACACACATATGCAC 59.992 44.000 1.58 0.00 0.00 4.57
39 40 5.585844 CCTTATGAAGACACACATATGCACA 59.414 40.000 1.58 0.00 0.00 4.57
40 41 6.261603 CCTTATGAAGACACACATATGCACAT 59.738 38.462 1.58 0.00 0.00 3.21
41 42 4.950434 TGAAGACACACATATGCACATG 57.050 40.909 2.71 2.71 0.00 3.21
42 43 3.127376 TGAAGACACACATATGCACATGC 59.873 43.478 4.49 0.00 42.50 4.06
43 44 2.995283 AGACACACATATGCACATGCT 58.005 42.857 4.49 0.00 42.66 3.79
44 45 4.141233 AGACACACATATGCACATGCTA 57.859 40.909 4.49 0.00 42.66 3.49
45 46 3.873361 AGACACACATATGCACATGCTAC 59.127 43.478 4.49 0.00 42.66 3.58
46 47 2.945008 ACACACATATGCACATGCTACC 59.055 45.455 4.49 0.00 42.66 3.18
47 48 2.291465 CACACATATGCACATGCTACCC 59.709 50.000 4.49 0.00 42.66 3.69
48 49 1.881973 CACATATGCACATGCTACCCC 59.118 52.381 4.49 0.00 42.66 4.95
49 50 1.776667 ACATATGCACATGCTACCCCT 59.223 47.619 4.49 0.00 42.66 4.79
50 51 2.978978 ACATATGCACATGCTACCCCTA 59.021 45.455 4.49 0.00 42.66 3.53
51 52 3.588842 ACATATGCACATGCTACCCCTAT 59.411 43.478 4.49 0.00 42.66 2.57
52 53 2.574006 ATGCACATGCTACCCCTATG 57.426 50.000 5.31 0.00 42.66 2.23
53 54 1.506025 TGCACATGCTACCCCTATGA 58.494 50.000 5.31 0.00 42.66 2.15
54 55 1.417517 TGCACATGCTACCCCTATGAG 59.582 52.381 5.31 0.00 42.66 2.90
55 56 1.879796 GCACATGCTACCCCTATGAGC 60.880 57.143 0.00 0.00 38.21 4.26
58 59 2.528134 TGCTACCCCTATGAGCACC 58.472 57.895 0.00 0.00 41.18 5.01
59 60 0.031111 TGCTACCCCTATGAGCACCT 60.031 55.000 0.00 0.00 41.18 4.00
60 61 0.682292 GCTACCCCTATGAGCACCTC 59.318 60.000 0.00 0.00 36.20 3.85
61 62 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
62 63 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
63 64 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
64 65 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
65 66 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
66 67 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
67 68 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
68 69 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
69 70 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
70 71 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
71 72 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
72 73 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
73 74 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
74 75 0.679640 CACCTCCGAGAGACTGAGCT 60.680 60.000 0.00 0.00 0.00 4.09
75 76 0.679640 ACCTCCGAGAGACTGAGCTG 60.680 60.000 0.00 0.00 0.00 4.24
76 77 1.383456 CCTCCGAGAGACTGAGCTGG 61.383 65.000 0.00 0.00 0.00 4.85
77 78 2.003658 CTCCGAGAGACTGAGCTGGC 62.004 65.000 0.00 0.00 0.00 4.85
78 79 2.346541 CCGAGAGACTGAGCTGGCA 61.347 63.158 0.00 0.00 0.00 4.92
79 80 1.674764 CCGAGAGACTGAGCTGGCAT 61.675 60.000 0.00 0.00 0.00 4.40
80 81 1.028130 CGAGAGACTGAGCTGGCATA 58.972 55.000 0.00 0.00 0.00 3.14
81 82 1.001487 CGAGAGACTGAGCTGGCATAG 60.001 57.143 0.00 0.00 0.00 2.23
91 92 3.748863 CTGGCATAGCAGAACGTCT 57.251 52.632 0.00 0.00 0.00 4.18
92 93 1.565305 CTGGCATAGCAGAACGTCTC 58.435 55.000 0.00 0.00 0.00 3.36
93 94 0.175760 TGGCATAGCAGAACGTCTCC 59.824 55.000 0.00 0.00 0.00 3.71
94 95 0.461961 GGCATAGCAGAACGTCTCCT 59.538 55.000 0.00 0.00 0.00 3.69
95 96 1.537135 GGCATAGCAGAACGTCTCCTC 60.537 57.143 0.00 0.00 0.00 3.71
96 97 1.537135 GCATAGCAGAACGTCTCCTCC 60.537 57.143 0.00 0.00 0.00 4.30
97 98 1.067821 CATAGCAGAACGTCTCCTCCC 59.932 57.143 0.00 0.00 0.00 4.30
98 99 0.039180 TAGCAGAACGTCTCCTCCCA 59.961 55.000 0.00 0.00 0.00 4.37
99 100 1.079750 GCAGAACGTCTCCTCCCAC 60.080 63.158 0.00 0.00 0.00 4.61
100 101 1.536943 GCAGAACGTCTCCTCCCACT 61.537 60.000 0.00 0.00 0.00 4.00
101 102 0.244994 CAGAACGTCTCCTCCCACTG 59.755 60.000 0.00 0.00 0.00 3.66
102 103 0.112606 AGAACGTCTCCTCCCACTGA 59.887 55.000 0.00 0.00 0.00 3.41
103 104 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
104 105 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
105 106 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
106 107 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
107 108 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
108 109 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
109 110 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
110 111 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
111 112 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
112 113 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
123 124 4.609018 CGCATCGCCGGGAATCCT 62.609 66.667 2.18 0.00 0.00 3.24
124 125 2.974698 GCATCGCCGGGAATCCTG 60.975 66.667 2.18 0.00 0.00 3.86
125 126 2.821685 CATCGCCGGGAATCCTGA 59.178 61.111 10.24 0.00 29.82 3.86
126 127 1.146041 CATCGCCGGGAATCCTGAA 59.854 57.895 10.24 0.00 29.82 3.02
127 128 0.463654 CATCGCCGGGAATCCTGAAA 60.464 55.000 10.24 0.00 29.82 2.69
128 129 0.254747 ATCGCCGGGAATCCTGAAAA 59.745 50.000 10.24 0.00 29.82 2.29
129 130 0.037017 TCGCCGGGAATCCTGAAAAA 59.963 50.000 10.24 0.00 29.82 1.94
150 151 6.639632 AAAATCCAGTATAAATGCGAGCAT 57.360 33.333 4.52 4.52 38.46 3.79
157 158 1.953559 TAAATGCGAGCATCAGGACC 58.046 50.000 11.26 0.00 35.31 4.46
163 164 0.247460 CGAGCATCAGGACCTGAACA 59.753 55.000 27.69 6.02 44.04 3.18
171 172 0.399949 AGGACCTGAACACTGGTGGA 60.400 55.000 0.00 0.00 36.31 4.02
177 178 2.446994 AACACTGGTGGACCGGGA 60.447 61.111 6.32 0.00 46.75 5.14
180 181 1.378762 CACTGGTGGACCGGGAATT 59.621 57.895 6.32 0.00 46.75 2.17
181 182 0.676782 CACTGGTGGACCGGGAATTC 60.677 60.000 6.32 0.00 46.75 2.17
184 185 1.211567 TGGTGGACCGGGAATTCCAT 61.212 55.000 25.67 10.67 43.85 3.41
189 190 1.389555 GACCGGGAATTCCATTGTCC 58.610 55.000 25.67 6.47 37.91 4.02
201 202 2.777692 TCCATTGTCCTCCTAACCATCC 59.222 50.000 0.00 0.00 0.00 3.51
207 208 2.509964 GTCCTCCTAACCATCCAACCAT 59.490 50.000 0.00 0.00 0.00 3.55
243 244 5.293324 CCACGCTAAATATGTTGAGCACTTA 59.707 40.000 11.72 0.00 41.24 2.24
249 250 8.279103 GCTAAATATGTTGAGCACTTAGACATC 58.721 37.037 6.67 0.00 40.91 3.06
254 255 2.447443 TGAGCACTTAGACATCGGAGT 58.553 47.619 0.00 0.00 0.00 3.85
264 265 3.018149 AGACATCGGAGTAGTCTGGTTC 58.982 50.000 6.55 1.13 40.02 3.62
283 284 2.226330 TCGTTGGATTGACCTGGTTTG 58.774 47.619 0.00 0.00 39.86 2.93
305 306 3.961477 TGGTCGCGATTAATTGGATTG 57.039 42.857 14.06 0.00 0.00 2.67
315 316 5.359576 CGATTAATTGGATTGACCCCTTTGA 59.640 40.000 0.00 0.00 38.00 2.69
316 317 5.993748 TTAATTGGATTGACCCCTTTGAC 57.006 39.130 0.00 0.00 38.00 3.18
385 400 5.727434 AGCTCCATGAAGGCTTTTATTTTG 58.273 37.500 0.00 0.00 37.29 2.44
495 515 7.768582 TCAAGATGAAATATCTTTAACTGCGGA 59.231 33.333 0.00 0.00 36.32 5.54
578 598 3.845781 TGTCTCTTTTGTGGAGCTCTT 57.154 42.857 14.64 0.00 0.00 2.85
579 599 4.955811 TGTCTCTTTTGTGGAGCTCTTA 57.044 40.909 14.64 0.00 0.00 2.10
594 614 7.858879 GTGGAGCTCTTATTTTAACGTTTTTCA 59.141 33.333 14.64 0.00 0.00 2.69
704 729 9.315363 TGAAGTTTTTAAATTAAGGCCTCCATA 57.685 29.630 5.23 0.00 0.00 2.74
725 750 7.550551 TCCATAGAGCTAGACAAATCTTTTGTG 59.449 37.037 10.13 0.00 36.29 3.33
762 789 5.840940 AAAACTCAAATCGACCGAAGTAG 57.159 39.130 0.00 0.00 0.00 2.57
784 811 4.406649 AGGCTTGGGTCCAAATGATTATTG 59.593 41.667 3.87 0.00 35.33 1.90
785 812 4.405358 GGCTTGGGTCCAAATGATTATTGA 59.595 41.667 3.87 0.00 35.33 2.57
786 813 5.452356 GGCTTGGGTCCAAATGATTATTGAG 60.452 44.000 3.87 0.00 35.33 3.02
787 814 5.360714 GCTTGGGTCCAAATGATTATTGAGA 59.639 40.000 3.87 0.00 35.33 3.27
788 815 6.681368 GCTTGGGTCCAAATGATTATTGAGAC 60.681 42.308 3.87 4.97 35.33 3.36
789 816 6.078456 TGGGTCCAAATGATTATTGAGACT 57.922 37.500 10.72 0.00 32.90 3.24
790 817 6.493166 TGGGTCCAAATGATTATTGAGACTT 58.507 36.000 10.72 0.00 32.90 3.01
791 818 6.953520 TGGGTCCAAATGATTATTGAGACTTT 59.046 34.615 10.72 0.00 32.90 2.66
792 819 7.093814 TGGGTCCAAATGATTATTGAGACTTTG 60.094 37.037 10.72 0.00 32.90 2.77
797 824 7.914346 CCAAATGATTATTGAGACTTTGAGAGC 59.086 37.037 0.00 0.00 0.00 4.09
907 934 1.227497 CAGGAATCAGGGAGAGCGC 60.227 63.158 0.00 0.00 0.00 5.92
1259 1292 2.618709 AGAAAGGTGTGCTTACTTGTGC 59.381 45.455 0.00 0.00 0.00 4.57
1264 1297 2.069273 GTGTGCTTACTTGTGCTCGAT 58.931 47.619 0.00 0.00 0.00 3.59
1275 1308 4.455533 ACTTGTGCTCGATGAAATGCTAAA 59.544 37.500 0.00 0.00 0.00 1.85
1285 1319 5.551760 ATGAAATGCTAAAGAAGACGGTG 57.448 39.130 0.00 0.00 0.00 4.94
1293 1327 0.748450 AAGAAGACGGTGGTTCGTGA 59.252 50.000 0.00 0.00 43.96 4.35
1299 1333 1.444553 CGGTGGTTCGTGAGAGCTC 60.445 63.158 5.27 5.27 43.69 4.09
1300 1334 1.867919 CGGTGGTTCGTGAGAGCTCT 61.868 60.000 18.28 18.28 43.69 4.09
1301 1335 1.174783 GGTGGTTCGTGAGAGCTCTA 58.825 55.000 18.25 0.00 43.69 2.43
1302 1336 1.544691 GGTGGTTCGTGAGAGCTCTAA 59.455 52.381 18.25 6.41 43.69 2.10
1303 1337 2.029290 GGTGGTTCGTGAGAGCTCTAAA 60.029 50.000 18.25 5.22 43.69 1.85
1304 1338 3.554337 GGTGGTTCGTGAGAGCTCTAAAA 60.554 47.826 18.25 5.86 43.69 1.52
1307 1341 3.062774 GGTTCGTGAGAGCTCTAAAATGC 59.937 47.826 18.25 3.28 43.69 3.56
1308 1342 3.876274 TCGTGAGAGCTCTAAAATGCT 57.124 42.857 18.25 0.00 42.82 3.79
1310 1344 3.193479 TCGTGAGAGCTCTAAAATGCTGA 59.807 43.478 18.25 3.66 39.91 4.26
1311 1345 3.551082 CGTGAGAGCTCTAAAATGCTGAG 59.449 47.826 18.25 0.00 39.91 3.35
1322 2952 0.108424 AATGCTGAGCGACCTGTCTC 60.108 55.000 0.00 0.00 0.00 3.36
1334 2964 6.120905 AGCGACCTGTCTCTCTATACTTTTA 58.879 40.000 0.00 0.00 0.00 1.52
1359 2989 8.931385 AATATGTGCTAATTGTTTTGTCCATC 57.069 30.769 0.00 0.00 0.00 3.51
1360 2990 5.132897 TGTGCTAATTGTTTTGTCCATCC 57.867 39.130 0.00 0.00 0.00 3.51
1361 2991 4.586421 TGTGCTAATTGTTTTGTCCATCCA 59.414 37.500 0.00 0.00 0.00 3.41
1362 2992 5.245751 TGTGCTAATTGTTTTGTCCATCCAT 59.754 36.000 0.00 0.00 0.00 3.41
1363 2993 6.165577 GTGCTAATTGTTTTGTCCATCCATT 58.834 36.000 0.00 0.00 0.00 3.16
1364 2994 6.091169 GTGCTAATTGTTTTGTCCATCCATTG 59.909 38.462 0.00 0.00 0.00 2.82
1403 3033 3.496884 TGCAACGAAAAGAAATAGCGTCT 59.503 39.130 0.00 0.00 33.66 4.18
1412 3042 7.201444 CGAAAAGAAATAGCGTCTGAAGTGTAT 60.201 37.037 0.00 0.00 0.00 2.29
1413 3043 7.907214 AAAGAAATAGCGTCTGAAGTGTATT 57.093 32.000 0.00 0.00 0.00 1.89
1414 3044 8.997621 AAAGAAATAGCGTCTGAAGTGTATTA 57.002 30.769 0.00 0.00 0.00 0.98
1415 3045 8.635877 AAGAAATAGCGTCTGAAGTGTATTAG 57.364 34.615 0.00 0.00 0.00 1.73
1416 3046 7.997482 AGAAATAGCGTCTGAAGTGTATTAGA 58.003 34.615 0.00 0.00 0.00 2.10
1417 3047 8.467598 AGAAATAGCGTCTGAAGTGTATTAGAA 58.532 33.333 0.00 0.00 0.00 2.10
1418 3048 8.997621 AAATAGCGTCTGAAGTGTATTAGAAA 57.002 30.769 0.00 0.00 0.00 2.52
1419 3049 9.601217 AAATAGCGTCTGAAGTGTATTAGAAAT 57.399 29.630 0.00 0.00 0.00 2.17
1450 3080 6.222038 AGACAACGGAGCTTATCTAATTCA 57.778 37.500 0.00 0.00 0.00 2.57
1453 3083 8.085296 AGACAACGGAGCTTATCTAATTCATAG 58.915 37.037 0.00 0.00 0.00 2.23
1475 3105 4.999950 AGATTCCATATGATTCAACCTCGC 59.000 41.667 3.65 0.00 0.00 5.03
1488 3118 2.868583 CAACCTCGCTAGATCACCATTG 59.131 50.000 0.00 0.00 0.00 2.82
1494 3124 4.461198 TCGCTAGATCACCATTGTAGAGA 58.539 43.478 0.00 0.00 0.00 3.10
1498 3128 6.389091 GCTAGATCACCATTGTAGAGAGATG 58.611 44.000 0.00 0.00 0.00 2.90
1504 3134 4.940046 CACCATTGTAGAGAGATGTTGCTT 59.060 41.667 0.00 0.00 0.00 3.91
1528 3158 4.263462 TGGCAGTCTAGTTTGAATGGTGAT 60.263 41.667 0.00 0.00 33.29 3.06
1529 3159 5.045942 TGGCAGTCTAGTTTGAATGGTGATA 60.046 40.000 0.00 0.00 33.29 2.15
1573 3203 9.787435 TTGCGTTATAAATAAATGATACTCCCT 57.213 29.630 0.00 0.00 0.00 4.20
1574 3204 9.431887 TGCGTTATAAATAAATGATACTCCCTC 57.568 33.333 0.00 0.00 0.00 4.30
1575 3205 9.654663 GCGTTATAAATAAATGATACTCCCTCT 57.345 33.333 0.00 0.00 0.00 3.69
1615 3245 9.660180 AGTCTTTGGAGAGATTTCACTATAAAC 57.340 33.333 0.00 0.00 31.07 2.01
1616 3246 8.884726 GTCTTTGGAGAGATTTCACTATAAACC 58.115 37.037 0.00 0.00 31.07 3.27
1617 3247 8.602424 TCTTTGGAGAGATTTCACTATAAACCA 58.398 33.333 0.00 0.00 0.00 3.67
1618 3248 8.561738 TTTGGAGAGATTTCACTATAAACCAC 57.438 34.615 0.00 0.00 0.00 4.16
1619 3249 6.338146 TGGAGAGATTTCACTATAAACCACG 58.662 40.000 0.00 0.00 0.00 4.94
1620 3250 6.070995 TGGAGAGATTTCACTATAAACCACGT 60.071 38.462 0.00 0.00 0.00 4.49
1621 3251 7.123098 TGGAGAGATTTCACTATAAACCACGTA 59.877 37.037 0.00 0.00 0.00 3.57
1622 3252 7.434602 GGAGAGATTTCACTATAAACCACGTAC 59.565 40.741 0.00 0.00 0.00 3.67
1623 3253 6.971184 AGAGATTTCACTATAAACCACGTACG 59.029 38.462 15.01 15.01 0.00 3.67
1624 3254 6.038356 AGATTTCACTATAAACCACGTACGG 58.962 40.000 21.06 8.46 0.00 4.02
1625 3255 5.384063 TTTCACTATAAACCACGTACGGA 57.616 39.130 21.06 0.00 0.00 4.69
1626 3256 4.621068 TCACTATAAACCACGTACGGAG 57.379 45.455 21.06 12.62 0.00 4.63
1627 3257 3.111098 CACTATAAACCACGTACGGAGC 58.889 50.000 21.06 0.00 0.00 4.70
1628 3258 2.754552 ACTATAAACCACGTACGGAGCA 59.245 45.455 21.06 0.00 0.00 4.26
1629 3259 2.747396 ATAAACCACGTACGGAGCAA 57.253 45.000 21.06 0.43 0.00 3.91
1630 3260 2.522836 TAAACCACGTACGGAGCAAA 57.477 45.000 21.06 0.00 0.00 3.68
1631 3261 1.666054 AAACCACGTACGGAGCAAAA 58.334 45.000 21.06 0.00 0.00 2.44
1632 3262 1.886886 AACCACGTACGGAGCAAAAT 58.113 45.000 21.06 0.00 0.00 1.82
1633 3263 1.153353 ACCACGTACGGAGCAAAATG 58.847 50.000 21.06 5.74 0.00 2.32
1634 3264 0.446222 CCACGTACGGAGCAAAATGG 59.554 55.000 21.06 11.39 0.00 3.16
1635 3265 0.446222 CACGTACGGAGCAAAATGGG 59.554 55.000 21.06 0.00 0.00 4.00
1636 3266 0.035739 ACGTACGGAGCAAAATGGGT 59.964 50.000 21.06 0.00 0.00 4.51
1637 3267 0.446222 CGTACGGAGCAAAATGGGTG 59.554 55.000 7.57 0.00 0.00 4.61
1638 3268 1.816074 GTACGGAGCAAAATGGGTGA 58.184 50.000 0.00 0.00 0.00 4.02
1639 3269 2.156098 GTACGGAGCAAAATGGGTGAA 58.844 47.619 0.00 0.00 0.00 3.18
1640 3270 1.923356 ACGGAGCAAAATGGGTGAAT 58.077 45.000 0.00 0.00 0.00 2.57
1641 3271 1.818674 ACGGAGCAAAATGGGTGAATC 59.181 47.619 0.00 0.00 0.00 2.52
1642 3272 2.094675 CGGAGCAAAATGGGTGAATCT 58.905 47.619 0.00 0.00 0.00 2.40
1643 3273 3.278574 CGGAGCAAAATGGGTGAATCTA 58.721 45.455 0.00 0.00 0.00 1.98
1644 3274 3.065371 CGGAGCAAAATGGGTGAATCTAC 59.935 47.826 0.00 0.00 0.00 2.59
1645 3275 4.016444 GGAGCAAAATGGGTGAATCTACA 58.984 43.478 0.00 0.00 0.00 2.74
1646 3276 4.142381 GGAGCAAAATGGGTGAATCTACAC 60.142 45.833 0.00 0.00 39.70 2.90
1647 3277 4.666512 AGCAAAATGGGTGAATCTACACT 58.333 39.130 0.00 0.00 40.22 3.55
1648 3278 4.702131 AGCAAAATGGGTGAATCTACACTC 59.298 41.667 0.00 0.00 41.16 3.51
1649 3279 4.702131 GCAAAATGGGTGAATCTACACTCT 59.298 41.667 0.00 0.00 41.33 3.24
1650 3280 5.880332 GCAAAATGGGTGAATCTACACTCTA 59.120 40.000 0.00 0.00 41.33 2.43
1651 3281 6.374333 GCAAAATGGGTGAATCTACACTCTAA 59.626 38.462 0.00 0.00 41.33 2.10
1652 3282 7.094377 GCAAAATGGGTGAATCTACACTCTAAA 60.094 37.037 0.00 0.00 41.33 1.85
1653 3283 8.792633 CAAAATGGGTGAATCTACACTCTAAAA 58.207 33.333 0.00 0.00 41.33 1.52
1654 3284 9.533831 AAAATGGGTGAATCTACACTCTAAAAT 57.466 29.630 0.00 0.00 41.33 1.82
1655 3285 8.511604 AATGGGTGAATCTACACTCTAAAATG 57.488 34.615 0.00 0.00 41.33 2.32
1656 3286 5.880332 TGGGTGAATCTACACTCTAAAATGC 59.120 40.000 0.00 0.00 41.33 3.56
1657 3287 5.880332 GGGTGAATCTACACTCTAAAATGCA 59.120 40.000 0.00 0.00 38.14 3.96
1658 3288 6.543831 GGGTGAATCTACACTCTAAAATGCAT 59.456 38.462 0.00 0.00 38.14 3.96
1659 3289 7.254932 GGGTGAATCTACACTCTAAAATGCATC 60.255 40.741 0.00 0.00 38.14 3.91
1660 3290 7.497249 GGTGAATCTACACTCTAAAATGCATCT 59.503 37.037 0.00 0.00 40.22 2.90
1661 3291 9.534565 GTGAATCTACACTCTAAAATGCATCTA 57.465 33.333 0.00 0.00 37.73 1.98
1671 3301 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
1672 3302 9.809096 CTCTAAAATGCATCTATATACATCCGT 57.191 33.333 0.00 0.00 0.00 4.69
1677 3307 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
1678 3308 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
1679 3309 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
1680 3310 6.918569 GCATCTATATACATCCGTATGTGGTC 59.081 42.308 3.56 0.00 45.99 4.02
1681 3311 7.426410 CATCTATATACATCCGTATGTGGTCC 58.574 42.308 3.56 0.00 45.99 4.46
1682 3312 6.486941 TCTATATACATCCGTATGTGGTCCA 58.513 40.000 3.56 0.00 45.99 4.02
1683 3313 7.123383 TCTATATACATCCGTATGTGGTCCAT 58.877 38.462 3.56 0.00 45.99 3.41
1684 3314 8.276477 TCTATATACATCCGTATGTGGTCCATA 58.724 37.037 3.56 0.00 45.99 2.74
1685 3315 5.661056 ATACATCCGTATGTGGTCCATAG 57.339 43.478 3.56 0.00 45.99 2.23
1686 3316 3.305720 ACATCCGTATGTGGTCCATAGT 58.694 45.455 0.00 0.00 44.79 2.12
1687 3317 4.476297 ACATCCGTATGTGGTCCATAGTA 58.524 43.478 0.00 0.00 44.79 1.82
1688 3318 4.523173 ACATCCGTATGTGGTCCATAGTAG 59.477 45.833 0.00 0.00 44.79 2.57
1689 3319 4.442401 TCCGTATGTGGTCCATAGTAGA 57.558 45.455 0.00 0.00 36.71 2.59
1690 3320 4.795469 TCCGTATGTGGTCCATAGTAGAA 58.205 43.478 0.00 0.00 36.71 2.10
1691 3321 5.391256 TCCGTATGTGGTCCATAGTAGAAT 58.609 41.667 0.00 0.00 36.71 2.40
1692 3322 5.475909 TCCGTATGTGGTCCATAGTAGAATC 59.524 44.000 0.00 0.00 36.71 2.52
1693 3323 5.477291 CCGTATGTGGTCCATAGTAGAATCT 59.523 44.000 0.00 0.00 36.71 2.40
1694 3324 6.349445 CCGTATGTGGTCCATAGTAGAATCTC 60.349 46.154 0.00 0.00 36.71 2.75
1695 3325 6.431543 CGTATGTGGTCCATAGTAGAATCTCT 59.568 42.308 0.00 0.00 36.71 3.10
1696 3326 7.606839 CGTATGTGGTCCATAGTAGAATCTCTA 59.393 40.741 0.00 0.00 36.71 2.43
1697 3327 8.732531 GTATGTGGTCCATAGTAGAATCTCTAC 58.267 40.741 0.00 5.81 40.89 2.59
1698 3328 8.445588 TATGTGGTCCATAGTAGAATCTCTACA 58.554 37.037 14.55 3.46 41.83 2.74
1717 3347 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
1718 3348 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
1719 3349 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
1720 3350 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
1721 3351 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
1722 3352 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
1723 3353 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
1724 3354 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
1725 3355 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
1726 3356 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
1727 3357 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
1728 3358 3.450096 ACATTTAGGAACGGAGGGAGTAC 59.550 47.826 0.00 0.00 0.00 2.73
1729 3359 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
1730 3360 4.591321 TTTAGGAACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 0.00 1.82
1731 3361 4.803329 TTAGGAACGGAGGGAGTACTAT 57.197 45.455 0.00 0.00 0.00 2.12
1732 3362 5.912149 TTAGGAACGGAGGGAGTACTATA 57.088 43.478 0.00 0.00 0.00 1.31
1733 3363 6.460103 TTAGGAACGGAGGGAGTACTATAT 57.540 41.667 0.00 0.00 0.00 0.86
1734 3364 7.574021 TTAGGAACGGAGGGAGTACTATATA 57.426 40.000 0.00 0.00 0.00 0.86
1735 3365 6.064735 AGGAACGGAGGGAGTACTATATAG 57.935 45.833 8.27 8.27 0.00 1.31
1759 3389 3.127548 ACCAGAATGCACTCGCTTTATTG 59.872 43.478 0.00 0.00 39.64 1.90
1776 3406 6.197096 GCTTTATTGCTGATTTCCATAACACG 59.803 38.462 0.00 0.00 0.00 4.49
1777 3407 4.637483 ATTGCTGATTTCCATAACACGG 57.363 40.909 0.00 0.00 0.00 4.94
1823 3453 8.554528 GTCATTCACATTATCACATCCTTGTAG 58.445 37.037 0.00 0.00 33.76 2.74
1830 3460 6.479972 TTATCACATCCTTGTAGTAGTGGG 57.520 41.667 0.00 0.00 33.76 4.61
1836 3466 3.990369 TCCTTGTAGTAGTGGGCATAGT 58.010 45.455 0.00 0.00 0.00 2.12
1857 3487 0.962356 CCCTCGGCTTTTCATGCACT 60.962 55.000 0.00 0.00 0.00 4.40
2005 3635 2.499289 CAGCTTCCAGATGTCTACCAGT 59.501 50.000 0.00 0.00 0.00 4.00
2020 3650 0.035630 CCAGTCTTGAGAGCTTGGGG 60.036 60.000 0.00 0.00 0.00 4.96
2067 3697 7.538303 CAACTTTGCCTGAGTTACAAAATTT 57.462 32.000 0.00 0.00 35.68 1.82
2076 3706 7.277760 GCCTGAGTTACAAAATTTCAGTTGTTT 59.722 33.333 0.00 0.00 38.80 2.83
2081 3711 8.931775 AGTTACAAAATTTCAGTTGTTTTGGAC 58.068 29.630 12.61 10.56 43.52 4.02
2095 3725 1.508632 TTGGACAGTTTAGCGTGCTC 58.491 50.000 0.00 0.00 0.00 4.26
2124 3757 3.713764 AGCAGCTGTACTCTCCCAATAAT 59.286 43.478 16.64 0.00 0.00 1.28
2127 3760 5.295950 CAGCTGTACTCTCCCAATAATGAG 58.704 45.833 5.25 0.00 0.00 2.90
2132 3765 5.897250 TGTACTCTCCCAATAATGAGCAGTA 59.103 40.000 0.00 0.00 0.00 2.74
2138 3771 5.448654 TCCCAATAATGAGCAGTAGCATTT 58.551 37.500 0.00 0.00 45.49 2.32
2181 3814 1.228094 TTGTTCCATGGCGTCTGCA 60.228 52.632 6.96 0.00 45.35 4.41
2183 3816 0.608856 TGTTCCATGGCGTCTGCATT 60.609 50.000 6.96 0.00 45.35 3.56
2218 3875 5.762825 AAGTTATGTGCATCCATCATGTC 57.237 39.130 0.00 0.00 34.56 3.06
2250 3907 9.107177 TGTAATTTGCACAAATCTGAATTGTTT 57.893 25.926 8.33 3.60 39.88 2.83
2270 3927 6.544650 TGTTTTATGGTAGGTTGCTCCTTTA 58.455 36.000 6.36 0.00 45.67 1.85
2273 3930 2.999331 TGGTAGGTTGCTCCTTTATGC 58.001 47.619 6.36 0.00 45.67 3.14
2344 4205 5.858381 TGGTTATATCATCTGACCTGCTTC 58.142 41.667 0.00 0.00 0.00 3.86
2345 4206 5.366477 TGGTTATATCATCTGACCTGCTTCA 59.634 40.000 0.00 0.00 0.00 3.02
2346 4207 6.043590 TGGTTATATCATCTGACCTGCTTCAT 59.956 38.462 0.00 0.00 0.00 2.57
2347 4208 6.939163 GGTTATATCATCTGACCTGCTTCATT 59.061 38.462 0.00 0.00 0.00 2.57
2348 4209 8.097038 GGTTATATCATCTGACCTGCTTCATTA 58.903 37.037 0.00 0.00 0.00 1.90
2349 4210 8.930760 GTTATATCATCTGACCTGCTTCATTAC 58.069 37.037 0.00 0.00 0.00 1.89
2350 4211 5.627182 ATCATCTGACCTGCTTCATTACT 57.373 39.130 0.00 0.00 0.00 2.24
2351 4212 6.737720 ATCATCTGACCTGCTTCATTACTA 57.262 37.500 0.00 0.00 0.00 1.82
2352 4213 6.544928 TCATCTGACCTGCTTCATTACTAA 57.455 37.500 0.00 0.00 0.00 2.24
2353 4214 6.577103 TCATCTGACCTGCTTCATTACTAAG 58.423 40.000 0.00 0.00 0.00 2.18
2354 4215 6.155221 TCATCTGACCTGCTTCATTACTAAGT 59.845 38.462 0.00 0.00 0.00 2.24
2355 4216 5.967088 TCTGACCTGCTTCATTACTAAGTC 58.033 41.667 0.00 0.00 0.00 3.01
2356 4217 5.480422 TCTGACCTGCTTCATTACTAAGTCA 59.520 40.000 0.00 0.00 0.00 3.41
2357 4218 5.724328 TGACCTGCTTCATTACTAAGTCAG 58.276 41.667 0.00 0.00 32.58 3.51
2358 4219 5.091261 ACCTGCTTCATTACTAAGTCAGG 57.909 43.478 17.24 17.24 44.71 3.86
2359 4220 4.777896 ACCTGCTTCATTACTAAGTCAGGA 59.222 41.667 21.95 0.00 43.45 3.86
2360 4221 5.248477 ACCTGCTTCATTACTAAGTCAGGAA 59.752 40.000 21.95 6.17 43.45 3.36
2361 4222 6.069963 ACCTGCTTCATTACTAAGTCAGGAAT 60.070 38.462 21.95 0.00 43.45 3.01
2372 4233 9.605275 TTACTAAGTCAGGAATGAATTCATCAG 57.395 33.333 20.95 11.20 42.53 2.90
2409 4271 6.793492 ACTCTTTCTTGCTATGTCAACTTC 57.207 37.500 0.00 0.00 0.00 3.01
2410 4272 5.703130 ACTCTTTCTTGCTATGTCAACTTCC 59.297 40.000 0.00 0.00 0.00 3.46
2430 4294 0.108520 CATGCAAGGTCAACATGCCC 60.109 55.000 0.00 0.00 39.31 5.36
2550 4419 4.884164 GTCCTGCACTTGCCTTTTCTATAT 59.116 41.667 0.00 0.00 41.18 0.86
2602 4471 6.599638 GTGGCCATATCTATAGACAAATTCCC 59.400 42.308 9.72 1.23 0.00 3.97
2617 4486 7.560991 AGACAAATTCCCAAACATATATGAGCA 59.439 33.333 19.63 0.00 0.00 4.26
2618 4487 7.719483 ACAAATTCCCAAACATATATGAGCAG 58.281 34.615 19.63 6.08 0.00 4.24
2654 4523 1.125093 TCTTTCAAGGACTGGGCGGA 61.125 55.000 0.00 0.00 0.00 5.54
2667 4536 1.120530 GGGCGGAACTTCTATCTGGA 58.879 55.000 0.00 0.00 0.00 3.86
2674 4543 5.583495 CGGAACTTCTATCTGGAGTGTTAG 58.417 45.833 0.00 0.00 0.00 2.34
2703 4572 4.744795 AGCATCGTCCTGAACTATTTCT 57.255 40.909 0.00 0.00 32.36 2.52
2714 4583 7.923878 GTCCTGAACTATTTCTTCCTCAGATAC 59.076 40.741 0.00 0.00 33.65 2.24
2715 4584 7.841729 TCCTGAACTATTTCTTCCTCAGATACT 59.158 37.037 0.00 0.00 33.65 2.12
2742 4611 1.404181 GCTTCTGTAGATGTCCGTGCA 60.404 52.381 0.00 0.00 0.00 4.57
2759 4628 5.088739 CCGTGCAGAACTTGTATTTGAATC 58.911 41.667 0.00 0.00 0.00 2.52
2761 4630 5.565259 CGTGCAGAACTTGTATTTGAATCAC 59.435 40.000 0.00 0.00 0.00 3.06
2787 4656 2.457598 TCCTTAGCATCGTCCTCACTT 58.542 47.619 0.00 0.00 0.00 3.16
2799 4668 4.342951 TCGTCCTCACTTGTTTCTTCCTTA 59.657 41.667 0.00 0.00 0.00 2.69
2907 4776 5.619981 GCCATTGTTCCTGTTCTTGTCATAC 60.620 44.000 0.00 0.00 0.00 2.39
2909 4778 6.348786 CCATTGTTCCTGTTCTTGTCATACAG 60.349 42.308 0.00 0.00 39.13 2.74
2964 4833 6.539826 TCTGCAATACTGTTGGAATCTGTATG 59.460 38.462 0.00 0.00 32.90 2.39
2982 4851 0.685458 TGCCCCCTACGAGTACTTCC 60.685 60.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.899019 TAAGGGTGAGTGTATGCGCA 59.101 50.000 14.96 14.96 0.00 6.09
1 2 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
2 3 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
3 4 4.811557 GTCTTCATAAGGGTGAGTGTATGC 59.188 45.833 0.00 0.00 0.00 3.14
4 5 5.812642 GTGTCTTCATAAGGGTGAGTGTATG 59.187 44.000 0.00 0.00 0.00 2.39
5 6 5.483937 TGTGTCTTCATAAGGGTGAGTGTAT 59.516 40.000 0.00 0.00 0.00 2.29
6 7 4.836175 TGTGTCTTCATAAGGGTGAGTGTA 59.164 41.667 0.00 0.00 0.00 2.90
7 8 3.646162 TGTGTCTTCATAAGGGTGAGTGT 59.354 43.478 0.00 0.00 0.00 3.55
8 9 3.997021 GTGTGTCTTCATAAGGGTGAGTG 59.003 47.826 0.00 0.00 0.00 3.51
9 10 3.646162 TGTGTGTCTTCATAAGGGTGAGT 59.354 43.478 0.00 0.00 0.00 3.41
10 11 4.271696 TGTGTGTCTTCATAAGGGTGAG 57.728 45.455 0.00 0.00 0.00 3.51
11 12 4.908601 ATGTGTGTCTTCATAAGGGTGA 57.091 40.909 0.00 0.00 0.00 4.02
12 13 5.008019 GCATATGTGTGTCTTCATAAGGGTG 59.992 44.000 4.29 0.00 31.67 4.61
13 14 5.126067 GCATATGTGTGTCTTCATAAGGGT 58.874 41.667 4.29 0.00 31.67 4.34
14 15 5.008019 GTGCATATGTGTGTCTTCATAAGGG 59.992 44.000 4.29 0.00 31.67 3.95
15 16 5.585844 TGTGCATATGTGTGTCTTCATAAGG 59.414 40.000 4.29 0.00 31.67 2.69
16 17 6.667007 TGTGCATATGTGTGTCTTCATAAG 57.333 37.500 4.29 0.00 31.67 1.73
17 18 6.458615 GCATGTGCATATGTGTGTCTTCATAA 60.459 38.462 22.48 0.00 41.59 1.90
18 19 5.007921 GCATGTGCATATGTGTGTCTTCATA 59.992 40.000 22.48 0.00 41.59 2.15
19 20 4.201980 GCATGTGCATATGTGTGTCTTCAT 60.202 41.667 22.48 0.00 41.59 2.57
20 21 3.127376 GCATGTGCATATGTGTGTCTTCA 59.873 43.478 22.48 0.00 41.59 3.02
21 22 3.376234 AGCATGTGCATATGTGTGTCTTC 59.624 43.478 22.48 5.49 45.16 2.87
22 23 3.349927 AGCATGTGCATATGTGTGTCTT 58.650 40.909 22.48 0.58 45.16 3.01
23 24 2.995283 AGCATGTGCATATGTGTGTCT 58.005 42.857 22.48 9.50 45.16 3.41
24 25 3.002656 GGTAGCATGTGCATATGTGTGTC 59.997 47.826 22.48 7.47 45.16 3.67
25 26 2.945008 GGTAGCATGTGCATATGTGTGT 59.055 45.455 22.48 9.40 45.16 3.72
26 27 2.291465 GGGTAGCATGTGCATATGTGTG 59.709 50.000 22.48 1.47 45.16 3.82
27 28 2.575532 GGGTAGCATGTGCATATGTGT 58.424 47.619 22.48 13.73 45.16 3.72
28 29 1.881973 GGGGTAGCATGTGCATATGTG 59.118 52.381 22.48 2.56 45.16 3.21
29 30 1.776667 AGGGGTAGCATGTGCATATGT 59.223 47.619 22.48 12.84 45.16 2.29
30 31 2.574006 AGGGGTAGCATGTGCATATG 57.426 50.000 18.29 18.29 45.16 1.78
31 32 3.845992 TCATAGGGGTAGCATGTGCATAT 59.154 43.478 7.83 0.00 45.16 1.78
32 33 3.247162 TCATAGGGGTAGCATGTGCATA 58.753 45.455 7.83 0.00 45.16 3.14
33 34 2.039480 CTCATAGGGGTAGCATGTGCAT 59.961 50.000 7.83 0.00 45.16 3.96
34 35 1.417517 CTCATAGGGGTAGCATGTGCA 59.582 52.381 7.83 0.00 45.16 4.57
35 36 1.879796 GCTCATAGGGGTAGCATGTGC 60.880 57.143 0.00 0.00 42.49 4.57
36 37 1.417517 TGCTCATAGGGGTAGCATGTG 59.582 52.381 0.00 0.00 41.15 3.21
37 38 1.417890 GTGCTCATAGGGGTAGCATGT 59.582 52.381 0.00 0.00 46.99 3.21
38 39 1.271054 GGTGCTCATAGGGGTAGCATG 60.271 57.143 0.00 0.00 46.99 4.06
39 40 1.059913 GGTGCTCATAGGGGTAGCAT 58.940 55.000 0.00 0.00 46.99 3.79
40 41 0.031111 AGGTGCTCATAGGGGTAGCA 60.031 55.000 0.00 0.00 43.66 3.49
41 42 0.682292 GAGGTGCTCATAGGGGTAGC 59.318 60.000 0.00 0.00 36.77 3.58
42 43 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
43 44 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
44 45 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
45 46 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
46 47 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
47 48 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
48 49 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
49 50 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
50 51 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
51 52 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
52 53 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
53 54 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
54 55 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
55 56 0.679640 AGCTCAGTCTCTCGGAGGTG 60.680 60.000 4.96 0.00 44.55 4.00
56 57 0.679640 CAGCTCAGTCTCTCGGAGGT 60.680 60.000 4.96 0.00 46.44 3.85
57 58 1.383456 CCAGCTCAGTCTCTCGGAGG 61.383 65.000 4.96 0.00 38.48 4.30
58 59 2.003658 GCCAGCTCAGTCTCTCGGAG 62.004 65.000 0.00 0.00 40.44 4.63
59 60 2.049185 GCCAGCTCAGTCTCTCGGA 61.049 63.158 0.00 0.00 0.00 4.55
60 61 1.674764 ATGCCAGCTCAGTCTCTCGG 61.675 60.000 0.00 0.00 0.00 4.63
61 62 1.001487 CTATGCCAGCTCAGTCTCTCG 60.001 57.143 0.00 0.00 0.00 4.04
62 63 2.798976 CTATGCCAGCTCAGTCTCTC 57.201 55.000 0.00 0.00 0.00 3.20
73 74 1.565305 GAGACGTTCTGCTATGCCAG 58.435 55.000 0.00 0.00 0.00 4.85
74 75 0.175760 GGAGACGTTCTGCTATGCCA 59.824 55.000 0.00 0.00 31.63 4.92
75 76 0.461961 AGGAGACGTTCTGCTATGCC 59.538 55.000 7.14 0.00 43.62 4.40
76 77 1.537135 GGAGGAGACGTTCTGCTATGC 60.537 57.143 8.54 0.00 45.50 3.14
77 78 1.067821 GGGAGGAGACGTTCTGCTATG 59.932 57.143 8.54 0.00 45.50 2.23
78 79 1.342076 TGGGAGGAGACGTTCTGCTAT 60.342 52.381 8.54 0.00 45.50 2.97
79 80 0.039180 TGGGAGGAGACGTTCTGCTA 59.961 55.000 8.54 0.00 45.50 3.49
81 82 1.079750 GTGGGAGGAGACGTTCTGC 60.080 63.158 0.00 0.00 34.82 4.26
82 83 0.244994 CAGTGGGAGGAGACGTTCTG 59.755 60.000 0.00 0.00 0.00 3.02
83 84 0.112606 TCAGTGGGAGGAGACGTTCT 59.887 55.000 0.00 0.00 0.00 3.01
84 85 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
85 86 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
86 87 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
87 88 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
88 89 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
89 90 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
90 91 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
91 92 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
92 93 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
93 94 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
94 95 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
95 96 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
106 107 4.609018 AGGATTCCCGGCGATGCG 62.609 66.667 9.30 0.00 37.58 4.73
107 108 2.940890 TTCAGGATTCCCGGCGATGC 62.941 60.000 9.30 0.00 37.58 3.91
108 109 0.463654 TTTCAGGATTCCCGGCGATG 60.464 55.000 9.30 0.00 37.58 3.84
109 110 0.254747 TTTTCAGGATTCCCGGCGAT 59.745 50.000 9.30 0.00 37.58 4.58
110 111 0.037017 TTTTTCAGGATTCCCGGCGA 59.963 50.000 9.30 0.00 37.58 5.54
111 112 2.562125 TTTTTCAGGATTCCCGGCG 58.438 52.632 0.00 0.00 37.58 6.46
126 127 6.449635 TGCTCGCATTTATACTGGATTTTT 57.550 33.333 0.00 0.00 0.00 1.94
127 128 6.262944 TGATGCTCGCATTTATACTGGATTTT 59.737 34.615 5.79 0.00 36.70 1.82
128 129 5.764686 TGATGCTCGCATTTATACTGGATTT 59.235 36.000 5.79 0.00 36.70 2.17
129 130 5.308014 TGATGCTCGCATTTATACTGGATT 58.692 37.500 5.79 0.00 36.70 3.01
130 131 4.898320 TGATGCTCGCATTTATACTGGAT 58.102 39.130 5.79 0.00 36.70 3.41
131 132 4.309933 CTGATGCTCGCATTTATACTGGA 58.690 43.478 5.79 0.00 36.70 3.86
132 133 3.434641 CCTGATGCTCGCATTTATACTGG 59.565 47.826 5.79 3.03 36.70 4.00
133 134 4.151335 GTCCTGATGCTCGCATTTATACTG 59.849 45.833 5.79 0.00 36.70 2.74
134 135 4.310769 GTCCTGATGCTCGCATTTATACT 58.689 43.478 5.79 0.00 36.70 2.12
135 136 3.433615 GGTCCTGATGCTCGCATTTATAC 59.566 47.826 5.79 3.47 36.70 1.47
139 140 0.254178 AGGTCCTGATGCTCGCATTT 59.746 50.000 5.79 0.00 36.70 2.32
150 151 0.758734 CACCAGTGTTCAGGTCCTGA 59.241 55.000 18.15 18.15 38.87 3.86
157 158 1.301716 CCGGTCCACCAGTGTTCAG 60.302 63.158 0.00 0.00 35.14 3.02
163 164 1.683441 GAATTCCCGGTCCACCAGT 59.317 57.895 0.00 0.00 35.14 4.00
171 172 0.999712 AGGACAATGGAATTCCCGGT 59.000 50.000 21.90 16.04 31.22 5.28
177 178 4.946160 TGGTTAGGAGGACAATGGAATT 57.054 40.909 0.00 0.00 36.63 2.17
180 181 2.777692 GGATGGTTAGGAGGACAATGGA 59.222 50.000 0.00 0.00 0.00 3.41
181 182 2.509548 TGGATGGTTAGGAGGACAATGG 59.490 50.000 0.00 0.00 0.00 3.16
184 185 2.307686 GGTTGGATGGTTAGGAGGACAA 59.692 50.000 0.00 0.00 0.00 3.18
189 190 3.716872 ACCTATGGTTGGATGGTTAGGAG 59.283 47.826 0.00 0.00 27.29 3.69
243 244 2.810870 ACCAGACTACTCCGATGTCT 57.189 50.000 0.00 0.00 41.15 3.41
249 250 1.402456 CCAACGAACCAGACTACTCCG 60.402 57.143 0.00 0.00 0.00 4.63
254 255 3.306502 GGTCAATCCAACGAACCAGACTA 60.307 47.826 0.00 0.00 35.97 2.59
264 265 2.226330 TCAAACCAGGTCAATCCAACG 58.774 47.619 0.00 0.00 39.02 4.10
283 284 4.213270 TCAATCCAATTAATCGCGACCATC 59.787 41.667 12.93 0.00 0.00 3.51
305 306 7.396339 ACCAATATAAAAAGAGTCAAAGGGGTC 59.604 37.037 0.00 0.00 0.00 4.46
337 338 3.691609 GTCTCCAAAATGGCCTACTCTTG 59.308 47.826 3.32 0.44 37.47 3.02
339 340 2.239907 GGTCTCCAAAATGGCCTACTCT 59.760 50.000 3.32 0.00 37.47 3.24
548 568 6.542821 TCCACAAAAGAGACAAATATGAGGT 58.457 36.000 0.00 0.00 0.00 3.85
554 574 5.869579 AGAGCTCCACAAAAGAGACAAATA 58.130 37.500 10.93 0.00 32.86 1.40
594 614 5.280654 ACATGAGTGCAAATTTTCAGGTT 57.719 34.783 0.00 0.00 31.33 3.50
704 729 4.457257 GCCACAAAAGATTTGTCTAGCTCT 59.543 41.667 5.54 0.00 0.00 4.09
762 789 4.405358 TCAATAATCATTTGGACCCAAGCC 59.595 41.667 1.42 0.00 37.24 4.35
784 811 4.162096 TCGTAGTTGCTCTCAAAGTCTC 57.838 45.455 0.00 0.00 33.37 3.36
785 812 3.057174 CCTCGTAGTTGCTCTCAAAGTCT 60.057 47.826 0.00 0.00 33.37 3.24
786 813 3.246619 CCTCGTAGTTGCTCTCAAAGTC 58.753 50.000 0.00 0.00 33.37 3.01
787 814 2.028930 CCCTCGTAGTTGCTCTCAAAGT 60.029 50.000 0.00 0.00 33.37 2.66
788 815 2.028930 ACCCTCGTAGTTGCTCTCAAAG 60.029 50.000 0.00 0.00 33.37 2.77
789 816 1.968493 ACCCTCGTAGTTGCTCTCAAA 59.032 47.619 0.00 0.00 33.37 2.69
790 817 1.272490 CACCCTCGTAGTTGCTCTCAA 59.728 52.381 0.00 0.00 0.00 3.02
791 818 0.888619 CACCCTCGTAGTTGCTCTCA 59.111 55.000 0.00 0.00 0.00 3.27
792 819 0.889306 ACACCCTCGTAGTTGCTCTC 59.111 55.000 0.00 0.00 0.00 3.20
797 824 2.056577 GTCGAAACACCCTCGTAGTTG 58.943 52.381 0.00 0.00 37.56 3.16
1259 1292 5.276584 CCGTCTTCTTTAGCATTTCATCGAG 60.277 44.000 0.00 0.00 0.00 4.04
1264 1297 3.751175 CCACCGTCTTCTTTAGCATTTCA 59.249 43.478 0.00 0.00 0.00 2.69
1275 1308 0.314302 CTCACGAACCACCGTCTTCT 59.686 55.000 0.00 0.00 41.29 2.85
1285 1319 3.062774 GCATTTTAGAGCTCTCACGAACC 59.937 47.826 22.17 0.86 0.00 3.62
1299 1333 2.349886 GACAGGTCGCTCAGCATTTTAG 59.650 50.000 0.00 0.00 0.00 1.85
1300 1334 2.028112 AGACAGGTCGCTCAGCATTTTA 60.028 45.455 0.00 0.00 34.09 1.52
1301 1335 1.160137 GACAGGTCGCTCAGCATTTT 58.840 50.000 0.00 0.00 0.00 1.82
1302 1336 0.322975 AGACAGGTCGCTCAGCATTT 59.677 50.000 0.00 0.00 34.09 2.32
1303 1337 0.108424 GAGACAGGTCGCTCAGCATT 60.108 55.000 0.00 0.00 34.09 3.56
1304 1338 0.969917 AGAGACAGGTCGCTCAGCAT 60.970 55.000 0.00 0.00 34.65 3.79
1310 1344 3.849563 AGTATAGAGAGACAGGTCGCT 57.150 47.619 5.34 5.34 42.40 4.93
1311 1345 4.904253 AAAGTATAGAGAGACAGGTCGC 57.096 45.455 0.00 0.00 34.09 5.19
1334 2964 7.981225 GGATGGACAAAACAATTAGCACATATT 59.019 33.333 0.00 0.00 0.00 1.28
1357 2987 7.558604 CATTCAACCTTTAACATCCAATGGAT 58.441 34.615 9.36 9.36 44.21 3.41
1358 2988 6.574073 GCATTCAACCTTTAACATCCAATGGA 60.574 38.462 3.67 3.67 35.55 3.41
1359 2989 5.581874 GCATTCAACCTTTAACATCCAATGG 59.418 40.000 0.00 0.00 33.60 3.16
1360 2990 6.164876 TGCATTCAACCTTTAACATCCAATG 58.835 36.000 0.00 0.00 0.00 2.82
1361 2991 6.357579 TGCATTCAACCTTTAACATCCAAT 57.642 33.333 0.00 0.00 0.00 3.16
1362 2992 5.798125 TGCATTCAACCTTTAACATCCAA 57.202 34.783 0.00 0.00 0.00 3.53
1363 2993 5.537188 GTTGCATTCAACCTTTAACATCCA 58.463 37.500 0.00 0.00 45.15 3.41
1375 3005 6.516739 GCTATTTCTTTTCGTTGCATTCAAC 58.483 36.000 0.00 0.00 46.85 3.18
1376 3006 5.341993 CGCTATTTCTTTTCGTTGCATTCAA 59.658 36.000 0.00 0.00 0.00 2.69
1377 3007 4.851014 CGCTATTTCTTTTCGTTGCATTCA 59.149 37.500 0.00 0.00 0.00 2.57
1378 3008 4.851558 ACGCTATTTCTTTTCGTTGCATTC 59.148 37.500 0.00 0.00 0.00 2.67
1379 3009 4.794169 ACGCTATTTCTTTTCGTTGCATT 58.206 34.783 0.00 0.00 0.00 3.56
1387 3017 6.229561 ACACTTCAGACGCTATTTCTTTTC 57.770 37.500 0.00 0.00 0.00 2.29
1392 3022 8.630278 TTCTAATACACTTCAGACGCTATTTC 57.370 34.615 0.00 0.00 0.00 2.17
1393 3023 8.997621 TTTCTAATACACTTCAGACGCTATTT 57.002 30.769 0.00 0.00 0.00 1.40
1394 3024 9.601217 AATTTCTAATACACTTCAGACGCTATT 57.399 29.630 0.00 0.00 0.00 1.73
1395 3025 9.601217 AAATTTCTAATACACTTCAGACGCTAT 57.399 29.630 0.00 0.00 0.00 2.97
1412 3042 9.095065 GCTCCGTTGTCTATTCTAAATTTCTAA 57.905 33.333 0.00 0.00 0.00 2.10
1413 3043 8.475639 AGCTCCGTTGTCTATTCTAAATTTCTA 58.524 33.333 0.00 0.00 0.00 2.10
1414 3044 7.331791 AGCTCCGTTGTCTATTCTAAATTTCT 58.668 34.615 0.00 0.00 0.00 2.52
1415 3045 7.541122 AGCTCCGTTGTCTATTCTAAATTTC 57.459 36.000 0.00 0.00 0.00 2.17
1416 3046 7.923414 AAGCTCCGTTGTCTATTCTAAATTT 57.077 32.000 0.00 0.00 0.00 1.82
1417 3047 9.262358 GATAAGCTCCGTTGTCTATTCTAAATT 57.738 33.333 0.00 0.00 0.00 1.82
1418 3048 8.643324 AGATAAGCTCCGTTGTCTATTCTAAAT 58.357 33.333 0.00 0.00 0.00 1.40
1419 3049 8.008513 AGATAAGCTCCGTTGTCTATTCTAAA 57.991 34.615 0.00 0.00 0.00 1.85
1450 3080 6.820656 GCGAGGTTGAATCATATGGAATCTAT 59.179 38.462 2.13 0.00 0.00 1.98
1453 3083 4.999950 AGCGAGGTTGAATCATATGGAATC 59.000 41.667 2.13 0.00 0.00 2.52
1460 3090 5.279006 GGTGATCTAGCGAGGTTGAATCATA 60.279 44.000 0.00 0.00 0.00 2.15
1461 3091 4.502259 GGTGATCTAGCGAGGTTGAATCAT 60.502 45.833 0.00 0.00 0.00 2.45
1466 3096 1.847328 TGGTGATCTAGCGAGGTTGA 58.153 50.000 0.00 0.00 0.00 3.18
1475 3105 7.523293 ACATCTCTCTACAATGGTGATCTAG 57.477 40.000 0.00 0.00 0.00 2.43
1504 3134 3.820467 CACCATTCAAACTAGACTGCCAA 59.180 43.478 0.00 0.00 0.00 4.52
1589 3219 9.660180 GTTTATAGTGAAATCTCTCCAAAGACT 57.340 33.333 0.00 0.00 0.00 3.24
1590 3220 8.884726 GGTTTATAGTGAAATCTCTCCAAAGAC 58.115 37.037 0.00 0.00 0.00 3.01
1591 3221 8.602424 TGGTTTATAGTGAAATCTCTCCAAAGA 58.398 33.333 0.00 0.00 0.00 2.52
1592 3222 8.669243 GTGGTTTATAGTGAAATCTCTCCAAAG 58.331 37.037 0.00 0.00 0.00 2.77
1593 3223 7.333423 CGTGGTTTATAGTGAAATCTCTCCAAA 59.667 37.037 0.00 0.00 0.00 3.28
1594 3224 6.816640 CGTGGTTTATAGTGAAATCTCTCCAA 59.183 38.462 0.00 0.00 0.00 3.53
1595 3225 6.070995 ACGTGGTTTATAGTGAAATCTCTCCA 60.071 38.462 0.00 0.00 0.00 3.86
1596 3226 6.338937 ACGTGGTTTATAGTGAAATCTCTCC 58.661 40.000 0.00 0.00 0.00 3.71
1597 3227 7.165483 CGTACGTGGTTTATAGTGAAATCTCTC 59.835 40.741 7.22 0.00 0.00 3.20
1598 3228 6.971184 CGTACGTGGTTTATAGTGAAATCTCT 59.029 38.462 7.22 0.00 0.00 3.10
1599 3229 6.197842 CCGTACGTGGTTTATAGTGAAATCTC 59.802 42.308 15.21 0.00 0.00 2.75
1600 3230 6.038356 CCGTACGTGGTTTATAGTGAAATCT 58.962 40.000 15.21 0.00 0.00 2.40
1601 3231 6.035843 TCCGTACGTGGTTTATAGTGAAATC 58.964 40.000 15.21 0.00 0.00 2.17
1602 3232 5.964758 TCCGTACGTGGTTTATAGTGAAAT 58.035 37.500 15.21 0.00 0.00 2.17
1603 3233 5.384063 TCCGTACGTGGTTTATAGTGAAA 57.616 39.130 15.21 0.00 0.00 2.69
1604 3234 4.675146 GCTCCGTACGTGGTTTATAGTGAA 60.675 45.833 15.21 0.00 0.00 3.18
1605 3235 3.181497 GCTCCGTACGTGGTTTATAGTGA 60.181 47.826 15.21 0.00 0.00 3.41
1606 3236 3.111098 GCTCCGTACGTGGTTTATAGTG 58.889 50.000 15.21 0.00 0.00 2.74
1607 3237 2.754552 TGCTCCGTACGTGGTTTATAGT 59.245 45.455 15.21 0.00 0.00 2.12
1608 3238 3.425577 TGCTCCGTACGTGGTTTATAG 57.574 47.619 15.21 0.00 0.00 1.31
1609 3239 3.865011 TTGCTCCGTACGTGGTTTATA 57.135 42.857 15.21 0.00 0.00 0.98
1610 3240 2.747396 TTGCTCCGTACGTGGTTTAT 57.253 45.000 15.21 0.00 0.00 1.40
1611 3241 2.522836 TTTGCTCCGTACGTGGTTTA 57.477 45.000 15.21 0.00 0.00 2.01
1612 3242 1.666054 TTTTGCTCCGTACGTGGTTT 58.334 45.000 15.21 0.00 0.00 3.27
1613 3243 1.533731 CATTTTGCTCCGTACGTGGTT 59.466 47.619 15.21 0.00 0.00 3.67
1614 3244 1.153353 CATTTTGCTCCGTACGTGGT 58.847 50.000 15.21 0.00 0.00 4.16
1615 3245 0.446222 CCATTTTGCTCCGTACGTGG 59.554 55.000 15.21 8.65 0.00 4.94
1616 3246 0.446222 CCCATTTTGCTCCGTACGTG 59.554 55.000 15.21 7.80 0.00 4.49
1617 3247 0.035739 ACCCATTTTGCTCCGTACGT 59.964 50.000 15.21 0.00 0.00 3.57
1618 3248 0.446222 CACCCATTTTGCTCCGTACG 59.554 55.000 8.69 8.69 0.00 3.67
1619 3249 1.816074 TCACCCATTTTGCTCCGTAC 58.184 50.000 0.00 0.00 0.00 3.67
1620 3250 2.570415 TTCACCCATTTTGCTCCGTA 57.430 45.000 0.00 0.00 0.00 4.02
1621 3251 1.818674 GATTCACCCATTTTGCTCCGT 59.181 47.619 0.00 0.00 0.00 4.69
1622 3252 2.094675 AGATTCACCCATTTTGCTCCG 58.905 47.619 0.00 0.00 0.00 4.63
1623 3253 4.016444 TGTAGATTCACCCATTTTGCTCC 58.984 43.478 0.00 0.00 0.00 4.70
1624 3254 4.702131 AGTGTAGATTCACCCATTTTGCTC 59.298 41.667 0.00 0.00 38.91 4.26
1625 3255 4.666512 AGTGTAGATTCACCCATTTTGCT 58.333 39.130 0.00 0.00 38.91 3.91
1626 3256 4.702131 AGAGTGTAGATTCACCCATTTTGC 59.298 41.667 0.00 0.00 38.91 3.68
1627 3257 7.921786 TTAGAGTGTAGATTCACCCATTTTG 57.078 36.000 0.00 0.00 38.91 2.44
1628 3258 8.934023 TTTTAGAGTGTAGATTCACCCATTTT 57.066 30.769 0.00 0.00 38.91 1.82
1629 3259 8.960591 CATTTTAGAGTGTAGATTCACCCATTT 58.039 33.333 0.00 0.00 38.91 2.32
1630 3260 7.067494 GCATTTTAGAGTGTAGATTCACCCATT 59.933 37.037 0.00 0.00 38.91 3.16
1631 3261 6.543831 GCATTTTAGAGTGTAGATTCACCCAT 59.456 38.462 0.00 0.00 38.91 4.00
1632 3262 5.880332 GCATTTTAGAGTGTAGATTCACCCA 59.120 40.000 0.00 0.00 38.91 4.51
1633 3263 5.880332 TGCATTTTAGAGTGTAGATTCACCC 59.120 40.000 0.00 0.00 38.91 4.61
1634 3264 6.985188 TGCATTTTAGAGTGTAGATTCACC 57.015 37.500 0.00 0.00 38.91 4.02
1635 3265 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
1645 3275 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
1646 3276 9.809096 ACGGATGTATATAGATGCATTTTAGAG 57.191 33.333 11.19 0.00 38.38 2.43
1650 3280 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
1651 3281 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
1652 3282 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
1653 3283 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
1654 3284 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
1655 3285 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
1656 3286 7.068226 TGGACCACATACGGATGTATATAGATG 59.932 40.741 14.23 0.00 44.82 2.90
1657 3287 7.123383 TGGACCACATACGGATGTATATAGAT 58.877 38.462 14.23 0.00 44.82 1.98
1658 3288 6.486941 TGGACCACATACGGATGTATATAGA 58.513 40.000 14.23 0.00 44.82 1.98
1659 3289 6.769134 TGGACCACATACGGATGTATATAG 57.231 41.667 14.23 0.00 44.82 1.31
1660 3290 8.057011 ACTATGGACCACATACGGATGTATATA 58.943 37.037 14.23 7.10 44.82 0.86
1661 3291 6.895756 ACTATGGACCACATACGGATGTATAT 59.104 38.462 14.23 1.16 44.82 0.86
1662 3292 6.250711 ACTATGGACCACATACGGATGTATA 58.749 40.000 14.23 6.48 44.82 1.47
1663 3293 5.084519 ACTATGGACCACATACGGATGTAT 58.915 41.667 14.23 4.48 44.82 2.29
1664 3294 4.476297 ACTATGGACCACATACGGATGTA 58.524 43.478 14.23 0.00 44.82 2.29
1666 3296 4.765339 TCTACTATGGACCACATACGGATG 59.235 45.833 5.94 5.94 41.03 3.51
1667 3297 4.994282 TCTACTATGGACCACATACGGAT 58.006 43.478 0.00 0.00 41.03 4.18
1668 3298 4.442401 TCTACTATGGACCACATACGGA 57.558 45.455 0.00 0.00 41.03 4.69
1669 3299 5.477291 AGATTCTACTATGGACCACATACGG 59.523 44.000 0.00 0.00 41.03 4.02
1670 3300 6.431543 AGAGATTCTACTATGGACCACATACG 59.568 42.308 0.00 0.00 41.03 3.06
1671 3301 7.768807 AGAGATTCTACTATGGACCACATAC 57.231 40.000 0.00 0.00 41.03 2.39
1672 3302 8.865420 GTAGAGATTCTACTATGGACCACATA 57.135 38.462 0.00 0.00 44.45 2.29
1673 3303 7.768807 GTAGAGATTCTACTATGGACCACAT 57.231 40.000 0.00 0.00 44.45 3.21
1691 3321 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
1692 3322 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
1693 3323 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
1694 3324 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
1695 3325 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
1696 3326 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
1697 3327 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
1698 3328 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
1699 3329 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
1700 3330 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
1701 3331 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
1702 3332 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
1703 3333 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
1704 3334 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
1705 3335 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
1706 3336 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
1707 3337 3.705072 AGTACTCCCTCCGTTCCTAAATG 59.295 47.826 0.00 0.00 0.00 2.32
1708 3338 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
1709 3339 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1710 3340 4.803329 ATAGTACTCCCTCCGTTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
1711 3341 6.732862 ACTATATAGTACTCCCTCCGTTCCTA 59.267 42.308 13.88 0.00 34.13 2.94
1712 3342 5.551189 ACTATATAGTACTCCCTCCGTTCCT 59.449 44.000 13.88 0.00 34.13 3.36
1713 3343 5.814481 ACTATATAGTACTCCCTCCGTTCC 58.186 45.833 13.88 0.00 34.13 3.62
1726 3356 7.148289 GCGAGTGCATTCTGGTACTATATAGTA 60.148 40.741 17.03 17.03 42.15 1.82
1727 3357 6.349445 GCGAGTGCATTCTGGTACTATATAGT 60.349 42.308 19.07 19.07 42.15 2.12
1728 3358 6.030849 GCGAGTGCATTCTGGTACTATATAG 58.969 44.000 8.27 8.27 42.15 1.31
1729 3359 5.710567 AGCGAGTGCATTCTGGTACTATATA 59.289 40.000 7.68 0.00 46.23 0.86
1730 3360 4.524714 AGCGAGTGCATTCTGGTACTATAT 59.475 41.667 7.68 0.00 46.23 0.86
1731 3361 3.889538 AGCGAGTGCATTCTGGTACTATA 59.110 43.478 7.68 0.00 46.23 1.31
1732 3362 2.695666 AGCGAGTGCATTCTGGTACTAT 59.304 45.455 7.68 0.00 46.23 2.12
1733 3363 2.100197 AGCGAGTGCATTCTGGTACTA 58.900 47.619 7.68 0.00 46.23 1.82
1734 3364 0.898320 AGCGAGTGCATTCTGGTACT 59.102 50.000 7.68 0.00 46.23 2.73
1735 3365 1.726853 AAGCGAGTGCATTCTGGTAC 58.273 50.000 7.68 0.00 46.23 3.34
1745 3375 3.411415 AATCAGCAATAAAGCGAGTGC 57.589 42.857 1.25 1.25 40.66 4.40
1746 3376 4.142622 TGGAAATCAGCAATAAAGCGAGTG 60.143 41.667 0.00 0.00 40.15 3.51
1747 3377 4.009675 TGGAAATCAGCAATAAAGCGAGT 58.990 39.130 0.00 0.00 40.15 4.18
1759 3389 1.065551 GGCCGTGTTATGGAAATCAGC 59.934 52.381 0.00 0.00 0.00 4.26
1776 3406 7.391148 TGACTTGTTCAATCTAAAATAGGCC 57.609 36.000 0.00 0.00 0.00 5.19
1777 3407 9.508567 GAATGACTTGTTCAATCTAAAATAGGC 57.491 33.333 0.00 0.00 37.92 3.93
1808 3438 4.344102 GCCCACTACTACAAGGATGTGATA 59.656 45.833 0.00 0.00 40.84 2.15
1830 3460 2.210961 GAAAAGCCGAGGGTACTATGC 58.789 52.381 0.00 0.00 0.00 3.14
1836 3466 0.326595 TGCATGAAAAGCCGAGGGTA 59.673 50.000 0.00 0.00 0.00 3.69
1842 3472 0.311790 ACACAGTGCATGAAAAGCCG 59.688 50.000 0.00 0.00 0.00 5.52
1890 3520 2.166459 CGAGAATAGCAGTTCCTGGACA 59.834 50.000 0.00 0.00 31.21 4.02
2020 3650 3.562732 AAAGCAGTACCACGGGCCC 62.563 63.158 13.57 13.57 0.00 5.80
2022 3652 1.579429 CAAAAGCAGTACCACGGGC 59.421 57.895 0.00 0.00 0.00 6.13
2052 3682 9.956797 CAAAACAACTGAAATTTTGTAACTCAG 57.043 29.630 0.00 0.00 38.13 3.35
2064 3694 6.756542 GCTAAACTGTCCAAAACAACTGAAAT 59.243 34.615 0.00 0.00 37.45 2.17
2067 3697 4.201871 CGCTAAACTGTCCAAAACAACTGA 60.202 41.667 0.00 0.00 37.45 3.41
2076 3706 1.508632 GAGCACGCTAAACTGTCCAA 58.491 50.000 0.00 0.00 0.00 3.53
2124 3757 6.172630 TCAACAGAATAAATGCTACTGCTCA 58.827 36.000 0.00 0.00 40.48 4.26
2127 3760 5.684626 GCATCAACAGAATAAATGCTACTGC 59.315 40.000 0.00 0.00 39.62 4.40
2138 3771 7.620880 AGGTAGTACAAAGCATCAACAGAATA 58.379 34.615 2.06 0.00 0.00 1.75
2181 3814 7.665559 TGCACATAACTTAACTTCAAGAGGAAT 59.334 33.333 0.00 0.00 34.32 3.01
2183 3816 6.530120 TGCACATAACTTAACTTCAAGAGGA 58.470 36.000 0.00 0.00 0.00 3.71
2218 3875 4.981674 AGATTTGTGCAAATTACAACACGG 59.018 37.500 10.94 0.00 40.77 4.94
2315 4099 7.880195 GCAGGTCAGATGATATAACCAAATACT 59.120 37.037 0.00 0.00 32.25 2.12
2316 4100 7.880195 AGCAGGTCAGATGATATAACCAAATAC 59.120 37.037 0.00 0.00 32.25 1.89
2317 4101 7.977818 AGCAGGTCAGATGATATAACCAAATA 58.022 34.615 0.00 0.00 32.25 1.40
2318 4102 6.845908 AGCAGGTCAGATGATATAACCAAAT 58.154 36.000 0.00 0.00 32.25 2.32
2320 4104 5.894298 AGCAGGTCAGATGATATAACCAA 57.106 39.130 0.00 0.00 32.25 3.67
2321 4105 5.366477 TGAAGCAGGTCAGATGATATAACCA 59.634 40.000 0.00 0.00 32.25 3.67
2322 4106 5.858381 TGAAGCAGGTCAGATGATATAACC 58.142 41.667 0.00 0.00 0.00 2.85
2323 4107 7.976135 AATGAAGCAGGTCAGATGATATAAC 57.024 36.000 0.00 0.00 0.00 1.89
2346 4207 9.605275 CTGATGAATTCATTCCTGACTTAGTAA 57.395 33.333 21.57 0.00 36.57 2.24
2347 4208 8.762645 ACTGATGAATTCATTCCTGACTTAGTA 58.237 33.333 21.57 0.00 36.57 1.82
2348 4209 7.628234 ACTGATGAATTCATTCCTGACTTAGT 58.372 34.615 21.57 7.57 36.57 2.24
2349 4210 9.258826 CTACTGATGAATTCATTCCTGACTTAG 57.741 37.037 21.57 6.97 36.57 2.18
2350 4211 8.981659 TCTACTGATGAATTCATTCCTGACTTA 58.018 33.333 21.57 5.24 36.57 2.24
2351 4212 7.855375 TCTACTGATGAATTCATTCCTGACTT 58.145 34.615 21.57 0.00 36.57 3.01
2352 4213 7.429374 TCTACTGATGAATTCATTCCTGACT 57.571 36.000 21.57 0.00 36.57 3.41
2353 4214 7.768120 AGTTCTACTGATGAATTCATTCCTGAC 59.232 37.037 21.57 13.80 36.57 3.51
2354 4215 7.855375 AGTTCTACTGATGAATTCATTCCTGA 58.145 34.615 21.57 13.23 36.57 3.86
2355 4216 9.775854 ATAGTTCTACTGATGAATTCATTCCTG 57.224 33.333 21.57 15.16 36.57 3.86
2372 4233 8.994170 AGCAAGAAAGAGTTTGAATAGTTCTAC 58.006 33.333 0.00 0.00 0.00 2.59
2409 4271 0.108520 GCATGTTGACCTTGCATGGG 60.109 55.000 21.67 13.32 42.30 4.00
2410 4272 0.108520 GGCATGTTGACCTTGCATGG 60.109 55.000 16.76 16.76 44.00 3.66
2430 4294 8.671921 TGTTACATTAGACGTTCCTAACTCTAG 58.328 37.037 0.00 0.00 32.11 2.43
2483 4351 9.533831 AAATGATTTAAGGAGTGTAATGAACCT 57.466 29.630 0.00 0.00 0.00 3.50
2510 4378 6.763135 GTGCAGGACTATTGAATTACATCAGA 59.237 38.462 0.00 0.00 0.00 3.27
2515 4383 5.123820 GCAAGTGCAGGACTATTGAATTACA 59.876 40.000 0.00 0.00 41.59 2.41
2522 4390 2.119801 AGGCAAGTGCAGGACTATTG 57.880 50.000 5.52 0.00 44.36 1.90
2530 4398 7.934457 ACAATATATAGAAAAGGCAAGTGCAG 58.066 34.615 5.52 0.00 44.36 4.41
2550 4419 7.392953 TGTGAGTTGGCATCATTCTTTACAATA 59.607 33.333 0.00 0.00 0.00 1.90
2617 4486 9.979578 CTTGAAAGATATGAGCTGATAAGTACT 57.020 33.333 0.00 0.00 0.00 2.73
2618 4487 9.202273 CCTTGAAAGATATGAGCTGATAAGTAC 57.798 37.037 0.00 0.00 0.00 2.73
2634 4503 0.035056 CCGCCCAGTCCTTGAAAGAT 60.035 55.000 0.00 0.00 0.00 2.40
2654 4523 8.196378 AGAAACTAACACTCCAGATAGAAGTT 57.804 34.615 0.00 0.00 0.00 2.66
2667 4536 5.638234 GGACGATGCTAAAGAAACTAACACT 59.362 40.000 0.00 0.00 0.00 3.55
2674 4543 4.691216 AGTTCAGGACGATGCTAAAGAAAC 59.309 41.667 0.00 0.00 0.00 2.78
2703 4572 5.717178 AGAAGCTAACACAGTATCTGAGGAA 59.283 40.000 3.70 0.00 35.18 3.36
2714 4583 5.105752 GGACATCTACAGAAGCTAACACAG 58.894 45.833 0.00 0.00 0.00 3.66
2715 4584 4.380550 CGGACATCTACAGAAGCTAACACA 60.381 45.833 0.00 0.00 0.00 3.72
2759 4628 5.360591 AGGACGATGCTAAGGAAATTAGTG 58.639 41.667 0.00 0.00 42.57 2.74
2761 4630 5.463724 GTGAGGACGATGCTAAGGAAATTAG 59.536 44.000 0.00 0.00 43.33 1.73
2838 4707 1.869774 CTTGGGCACAAAAAGGAAGC 58.130 50.000 1.48 0.00 35.89 3.86
2907 4776 3.754965 TGGTTCCTTTGAAGATGGTCTG 58.245 45.455 0.00 0.00 0.00 3.51
2909 4778 5.501156 ACTATGGTTCCTTTGAAGATGGTC 58.499 41.667 0.00 0.00 0.00 4.02
2964 4833 0.396835 AGGAAGTACTCGTAGGGGGC 60.397 60.000 0.00 0.00 0.00 5.80
2982 4851 7.537715 AGATTGATACAGATATGCGAGAGAAG 58.462 38.462 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.