Multiple sequence alignment - TraesCS5B01G131400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G131400 chr5B 100.000 6083 0 0 1 6083 244115770 244121852 0.000000e+00 11234.0
1 TraesCS5B01G131400 chr5B 94.262 122 5 1 4193 4314 38365240 38365121 1.040000e-42 185.0
2 TraesCS5B01G131400 chr5B 91.753 97 8 0 5629 5725 496138767 496138671 1.060000e-27 135.0
3 TraesCS5B01G131400 chr5A 94.623 1711 69 10 2376 4078 302308224 302306529 0.000000e+00 2628.0
4 TraesCS5B01G131400 chr5A 97.070 1263 23 4 785 2040 302309773 302308518 0.000000e+00 2115.0
5 TraesCS5B01G131400 chr5A 95.013 1183 37 10 4313 5494 302306089 302304928 0.000000e+00 1838.0
6 TraesCS5B01G131400 chr5A 98.585 212 3 0 2038 2249 302308437 302308226 5.760000e-100 375.0
7 TraesCS5B01G131400 chr5A 85.304 313 40 1 1 313 10803713 10803407 9.840000e-83 318.0
8 TraesCS5B01G131400 chr5A 95.349 129 3 1 5508 5633 302304857 302304729 1.030000e-47 202.0
9 TraesCS5B01G131400 chr5A 87.805 123 11 4 5961 6083 302304633 302304515 2.290000e-29 141.0
10 TraesCS5B01G131400 chr5A 100.000 30 0 0 4082 4111 302306491 302306520 8.520000e-04 56.5
11 TraesCS5B01G131400 chr5D 91.504 1742 90 30 2375 4076 221588709 221590432 0.000000e+00 2344.0
12 TraesCS5B01G131400 chr5D 96.920 1331 25 6 785 2106 221587306 221588629 0.000000e+00 2217.0
13 TraesCS5B01G131400 chr5D 96.703 1183 30 5 4313 5494 221590865 221592039 0.000000e+00 1960.0
14 TraesCS5B01G131400 chr5D 96.124 129 2 1 5508 5633 221592106 221592234 2.220000e-49 207.0
15 TraesCS5B01G131400 chr5D 90.184 163 11 4 5806 5963 334801295 334801457 2.220000e-49 207.0
16 TraesCS5B01G131400 chr5D 98.734 79 1 0 2171 2249 221588628 221588706 2.290000e-29 141.0
17 TraesCS5B01G131400 chr5D 91.579 95 7 1 5713 5807 221592231 221592324 4.950000e-26 130.0
18 TraesCS5B01G131400 chr7B 93.548 775 48 1 1 775 581496256 581495484 0.000000e+00 1153.0
19 TraesCS5B01G131400 chr7B 83.402 482 75 4 290 769 687048934 687048456 5.600000e-120 442.0
20 TraesCS5B01G131400 chr7B 96.403 139 4 1 2249 2386 489146774 489146912 1.710000e-55 228.0
21 TraesCS5B01G131400 chr7B 95.139 144 7 0 2235 2378 736367631 736367488 1.710000e-55 228.0
22 TraesCS5B01G131400 chr7B 92.763 152 9 2 2232 2383 680658551 680658402 1.030000e-52 219.0
23 TraesCS5B01G131400 chr7B 92.763 152 8 3 2228 2379 126549244 126549096 3.690000e-52 217.0
24 TraesCS5B01G131400 chr7B 90.840 131 9 3 4189 4318 252178052 252178180 8.110000e-39 172.0
25 TraesCS5B01G131400 chr3B 88.645 775 86 1 1 775 19230186 19230958 0.000000e+00 942.0
26 TraesCS5B01G131400 chr3B 96.377 138 4 1 2238 2375 407477901 407477765 6.130000e-55 226.0
27 TraesCS5B01G131400 chr3B 89.535 172 13 1 5806 5972 37969133 37969304 4.780000e-51 213.0
28 TraesCS5B01G131400 chr3B 92.126 127 8 2 4187 4313 475816883 475817007 1.740000e-40 178.0
29 TraesCS5B01G131400 chr3B 92.623 122 7 1 4190 4311 29607598 29607717 2.250000e-39 174.0
30 TraesCS5B01G131400 chr4D 83.161 772 128 1 7 778 379278420 379277651 0.000000e+00 704.0
31 TraesCS5B01G131400 chr4D 91.358 162 9 1 5806 5962 484111925 484111764 3.690000e-52 217.0
32 TraesCS5B01G131400 chr4D 95.455 88 4 0 5629 5716 478668929 478669016 2.290000e-29 141.0
33 TraesCS5B01G131400 chr2D 80.463 778 146 5 2 777 625537726 625538499 1.890000e-164 590.0
34 TraesCS5B01G131400 chr2D 92.000 125 7 2 4191 4314 428669900 428670022 8.110000e-39 172.0
35 TraesCS5B01G131400 chr6D 90.233 430 40 1 348 777 335333653 335334080 1.480000e-155 560.0
36 TraesCS5B01G131400 chr6D 88.150 346 37 1 3 344 335324920 335325265 5.680000e-110 409.0
37 TraesCS5B01G131400 chr6D 95.455 88 4 0 5627 5714 437774047 437774134 2.290000e-29 141.0
38 TraesCS5B01G131400 chr2B 90.000 370 36 1 353 722 25407242 25407610 1.530000e-130 477.0
39 TraesCS5B01G131400 chr2B 77.979 772 162 7 1 769 668334627 668335393 1.530000e-130 477.0
40 TraesCS5B01G131400 chr2B 88.509 322 31 1 1 322 25406621 25406936 9.560000e-103 385.0
41 TraesCS5B01G131400 chr2B 89.474 171 13 1 5806 5971 134256851 134256681 1.720000e-50 211.0
42 TraesCS5B01G131400 chr2A 86.458 384 50 1 392 775 102898759 102899140 2.620000e-113 420.0
43 TraesCS5B01G131400 chr2A 85.455 275 34 1 10 284 102898218 102898486 1.290000e-71 281.0
44 TraesCS5B01G131400 chr2A 94.521 146 7 1 2231 2375 749872714 749872859 2.210000e-54 224.0
45 TraesCS5B01G131400 chr2A 91.753 97 8 0 5625 5721 17484147 17484051 1.060000e-27 135.0
46 TraesCS5B01G131400 chr3A 86.262 313 37 1 1 313 725407584 725407278 9.770000e-88 335.0
47 TraesCS5B01G131400 chr3A 92.208 154 8 4 2230 2381 110030039 110030190 1.330000e-51 215.0
48 TraesCS5B01G131400 chr6A 96.403 139 5 0 2246 2384 473421988 473422126 4.740000e-56 230.0
49 TraesCS5B01G131400 chr1D 97.080 137 3 1 2249 2384 368493811 368493675 4.740000e-56 230.0
50 TraesCS5B01G131400 chr1D 93.548 93 5 1 5627 5719 483877507 483877598 2.960000e-28 137.0
51 TraesCS5B01G131400 chr4A 88.827 179 15 1 5806 5979 625174307 625174129 1.330000e-51 215.0
52 TraesCS5B01G131400 chr4A 89.423 104 11 0 5618 5721 434312215 434312112 1.380000e-26 132.0
53 TraesCS5B01G131400 chrUn 89.535 172 13 1 5796 5962 265419789 265419618 4.780000e-51 213.0
54 TraesCS5B01G131400 chr6B 89.535 172 13 1 5796 5962 88842337 88842508 4.780000e-51 213.0
55 TraesCS5B01G131400 chr6B 89.535 172 13 1 5796 5962 88859814 88859985 4.780000e-51 213.0
56 TraesCS5B01G131400 chr3D 89.941 169 12 4 5802 5965 47779470 47779302 4.780000e-51 213.0
57 TraesCS5B01G131400 chr3D 89.630 135 11 2 4190 4323 208640710 208640578 1.050000e-37 169.0
58 TraesCS5B01G131400 chr3D 94.382 89 5 0 5630 5718 141424359 141424271 2.960000e-28 137.0
59 TraesCS5B01G131400 chr7D 95.041 121 5 1 4193 4313 521557260 521557141 8.050000e-44 189.0
60 TraesCS5B01G131400 chr4B 93.388 121 6 1 4192 4312 254413366 254413248 1.740000e-40 178.0
61 TraesCS5B01G131400 chr4B 95.506 89 4 0 5627 5715 19743505 19743417 6.360000e-30 143.0
62 TraesCS5B01G131400 chr7A 89.706 136 8 5 4186 4319 1416106 1416237 1.050000e-37 169.0
63 TraesCS5B01G131400 chr1B 91.000 100 8 1 5630 5729 300581256 300581354 3.830000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G131400 chr5B 244115770 244121852 6082 False 11234.0 11234 100.000000 1 6083 1 chr5B.!!$F1 6082
1 TraesCS5B01G131400 chr5A 302304515 302309773 5258 True 1216.5 2628 94.740833 785 6083 6 chr5A.!!$R2 5298
2 TraesCS5B01G131400 chr5D 221587306 221592324 5018 False 1166.5 2344 95.260667 785 5807 6 chr5D.!!$F2 5022
3 TraesCS5B01G131400 chr7B 581495484 581496256 772 True 1153.0 1153 93.548000 1 775 1 chr7B.!!$R2 774
4 TraesCS5B01G131400 chr3B 19230186 19230958 772 False 942.0 942 88.645000 1 775 1 chr3B.!!$F1 774
5 TraesCS5B01G131400 chr4D 379277651 379278420 769 True 704.0 704 83.161000 7 778 1 chr4D.!!$R1 771
6 TraesCS5B01G131400 chr2D 625537726 625538499 773 False 590.0 590 80.463000 2 777 1 chr2D.!!$F2 775
7 TraesCS5B01G131400 chr2B 668334627 668335393 766 False 477.0 477 77.979000 1 769 1 chr2B.!!$F1 768
8 TraesCS5B01G131400 chr2B 25406621 25407610 989 False 431.0 477 89.254500 1 722 2 chr2B.!!$F2 721
9 TraesCS5B01G131400 chr2A 102898218 102899140 922 False 350.5 420 85.956500 10 775 2 chr2A.!!$F2 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
799 1075 0.320073 AAAATCCACGTTCTCCGCGA 60.320 50.000 8.23 0.0 41.42 5.87 F
1098 1381 1.379977 CGTCCACTCCTGCCTCCTA 60.380 63.158 0.00 0.0 0.00 2.94 F
1845 2128 6.365247 GCAGTGTCTTCGACAAGAAAATACTA 59.635 38.462 0.00 0.0 44.49 1.82 F
2267 2636 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.0 44.66 2.17 F
2270 2639 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 F
4106 4566 0.249120 TCGTGGTAGACATGGCAAGG 59.751 55.000 0.00 0.0 36.71 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2249 2618 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85 R
2251 2620 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
2705 3110 0.897863 GCCCATGCAACAGTTACCCA 60.898 55.000 0.00 0.00 37.47 4.51 R
4084 4501 0.901827 TGCCATGTCTACCACGATGT 59.098 50.000 0.00 0.00 0.00 3.06 R
4200 4940 1.129811 GCAACAAGTAATTCCGGACGG 59.870 52.381 1.83 3.96 0.00 4.79 R
6057 6862 0.469070 TTTTCGGACGGTTTCCCTCA 59.531 50.000 0.00 0.00 42.27 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 5.154222 GTTGTTTGAGTTATACAGCAAGCC 58.846 41.667 0.00 0.00 0.00 4.35
249 250 1.671054 GCTAGCCCAACAACAGCGA 60.671 57.895 2.29 0.00 0.00 4.93
346 347 3.075005 GCGGGGAGGTGCAGTAGA 61.075 66.667 0.00 0.00 0.00 2.59
380 656 6.798427 AGAGATGAGAATGGCAACTACTTA 57.202 37.500 0.00 0.00 37.61 2.24
465 741 1.811679 GAAGGACTAGCGCTGGCAC 60.812 63.158 22.90 13.84 43.41 5.01
473 749 0.755327 TAGCGCTGGCACCTGATCTA 60.755 55.000 22.90 0.00 43.41 1.98
661 937 2.153645 TCACAATCTCGCAAAGCATGT 58.846 42.857 0.00 0.00 0.00 3.21
733 1009 5.601313 ACCCGACTATTGTACCTATGAACAT 59.399 40.000 0.00 0.00 0.00 2.71
734 1010 6.099269 ACCCGACTATTGTACCTATGAACATT 59.901 38.462 0.00 0.00 0.00 2.71
799 1075 0.320073 AAAATCCACGTTCTCCGCGA 60.320 50.000 8.23 0.00 41.42 5.87
1025 1308 3.467226 CCTCCCATACACCGCCGT 61.467 66.667 0.00 0.00 0.00 5.68
1098 1381 1.379977 CGTCCACTCCTGCCTCCTA 60.380 63.158 0.00 0.00 0.00 2.94
1845 2128 6.365247 GCAGTGTCTTCGACAAGAAAATACTA 59.635 38.462 0.00 0.00 44.49 1.82
1846 2129 7.619571 GCAGTGTCTTCGACAAGAAAATACTAC 60.620 40.741 0.00 0.00 44.49 2.73
1847 2130 7.595502 CAGTGTCTTCGACAAGAAAATACTACT 59.404 37.037 0.00 0.00 44.49 2.57
1848 2131 7.808856 AGTGTCTTCGACAAGAAAATACTACTC 59.191 37.037 0.00 0.00 44.49 2.59
1849 2132 6.800408 TGTCTTCGACAAGAAAATACTACTCG 59.200 38.462 0.00 0.00 40.49 4.18
2061 2430 6.872020 TGTAGTTCACTTGTAGTTTAGGATGC 59.128 38.462 0.00 0.00 0.00 3.91
2263 2632 0.609662 TTTTTACTCCCTCCGTCCGG 59.390 55.000 0.00 0.00 0.00 5.14
2264 2633 0.251742 TTTTACTCCCTCCGTCCGGA 60.252 55.000 0.00 0.00 42.90 5.14
2265 2634 0.251742 TTTACTCCCTCCGTCCGGAA 60.252 55.000 5.23 0.00 44.66 4.30
2266 2635 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
2267 2636 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2268 2637 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2269 2638 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2270 2639 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2271 2640 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2272 2641 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2273 2642 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2274 2643 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2275 2644 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2276 2645 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2277 2646 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2278 2647 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2279 2648 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2280 2649 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2281 2650 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2282 2651 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2283 2652 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2284 2653 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2285 2654 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2286 2655 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2294 2663 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
2295 2664 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
2296 2665 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
2297 2666 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
2298 2667 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
2299 2668 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
2302 2671 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
2308 2677 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
2316 2685 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
2357 2726 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
2358 2727 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
2359 2728 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
2360 2729 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
2361 2730 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
2362 2731 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
2363 2732 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2364 2733 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2365 2734 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2366 2735 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2367 2736 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2368 2737 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2369 2738 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2370 2739 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2371 2740 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2372 2741 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2373 2742 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2374 2743 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2422 2793 4.989279 ATCCAGTCCATTACATTTGCAC 57.011 40.909 0.00 0.00 0.00 4.57
2458 2829 7.989741 AGTTACCAAAGTAAGGATGATCATCAG 59.010 37.037 31.49 13.53 39.13 2.90
2475 2846 5.745227 TCATCAGATACCCACTTTCTTTCC 58.255 41.667 0.00 0.00 0.00 3.13
2576 2981 3.821033 ACTGTACAAATCCAAGCACCTTC 59.179 43.478 0.00 0.00 0.00 3.46
2621 3026 5.355596 TGACCAAACTTAACTTTGCCAATG 58.644 37.500 2.93 0.00 30.87 2.82
2661 3066 4.698304 TGGACGAACTATTCAAACAATCCC 59.302 41.667 0.00 0.00 0.00 3.85
2779 3184 4.271687 CACTGTGTTAACGTCTTTTCTGC 58.728 43.478 0.26 0.00 0.00 4.26
2956 3362 3.199289 GGGTTTTCTTAGCCTAGGTAGCA 59.801 47.826 11.31 0.00 32.89 3.49
2963 3369 4.645588 TCTTAGCCTAGGTAGCAAAGACTC 59.354 45.833 11.31 0.00 0.00 3.36
3053 3459 2.288961 GCAAAGGATCTGGTTGCATG 57.711 50.000 17.81 0.00 45.51 4.06
3091 3497 3.890756 GGATGGTGAACATATGCCATGAA 59.109 43.478 15.00 0.77 41.33 2.57
3097 3503 4.067192 TGAACATATGCCATGAAGATCGG 58.933 43.478 1.58 0.00 0.00 4.18
3110 3516 8.443937 GCCATGAAGATCGGTTAATATCTAAAC 58.556 37.037 0.00 0.00 32.17 2.01
3150 3557 9.783256 AACCACAAAGTCTAAAATTAATATCGC 57.217 29.630 0.00 0.00 0.00 4.58
3400 3809 8.589338 AGTGAAACCTGCTATATACATAGGAAG 58.411 37.037 0.00 0.00 34.99 3.46
3656 4069 4.275936 ACAAGTTTCAGTGTATGCTTCCAC 59.724 41.667 0.00 0.00 0.00 4.02
3680 4093 6.934645 ACTTCCTCATTCTTAACATTTGACGA 59.065 34.615 0.00 0.00 0.00 4.20
3687 4100 3.743911 TCTTAACATTTGACGACGCACAT 59.256 39.130 0.00 0.00 0.00 3.21
3688 4101 4.924462 TCTTAACATTTGACGACGCACATA 59.076 37.500 0.00 0.00 0.00 2.29
3700 4113 3.226347 GACGCACATAGTTTCAAACAGC 58.774 45.455 2.41 0.00 0.00 4.40
3762 4175 3.971468 TGCTTAAATGGGGATAAGCCT 57.029 42.857 13.22 0.00 42.91 4.58
3804 4218 5.336372 AGTTCAAACTACTGCAAAGTGCAAA 60.336 36.000 4.25 0.00 45.01 3.68
3805 4219 7.116452 AGTTCAAACTACTGCAAAGTGCAAAG 61.116 38.462 4.25 7.40 45.01 2.77
3806 4220 9.393768 AGTTCAAACTACTGCAAAGTGCAAAGT 62.394 37.037 4.25 7.99 45.01 2.66
3835 4249 8.874744 ATGGACTTCTATATTTTGCTATGCAT 57.125 30.769 3.79 3.79 38.76 3.96
3894 4308 9.256477 TGTACTGATGTTCTAAAACTAGTTGTG 57.744 33.333 9.34 2.82 36.30 3.33
4078 4495 4.085357 ACTTATTCTGCAAGGTCACACA 57.915 40.909 0.00 0.00 0.00 3.72
4079 4496 3.815401 ACTTATTCTGCAAGGTCACACAC 59.185 43.478 0.00 0.00 0.00 3.82
4081 4498 3.769739 ATTCTGCAAGGTCACACACTA 57.230 42.857 0.00 0.00 0.00 2.74
4083 4500 2.316108 TCTGCAAGGTCACACACTAGA 58.684 47.619 0.00 0.00 0.00 2.43
4084 4501 2.698274 TCTGCAAGGTCACACACTAGAA 59.302 45.455 0.00 0.00 0.00 2.10
4085 4502 2.802816 CTGCAAGGTCACACACTAGAAC 59.197 50.000 0.00 0.00 0.00 3.01
4089 4549 3.577649 AGGTCACACACTAGAACATCG 57.422 47.619 0.00 0.00 0.00 3.84
4093 4553 2.626266 TCACACACTAGAACATCGTGGT 59.374 45.455 0.00 0.00 33.13 4.16
4100 4560 5.037385 CACTAGAACATCGTGGTAGACATG 58.963 45.833 0.00 0.00 37.44 3.21
4102 4562 1.933853 GAACATCGTGGTAGACATGGC 59.066 52.381 0.00 0.00 36.71 4.40
4105 4565 1.935873 CATCGTGGTAGACATGGCAAG 59.064 52.381 0.00 0.00 36.71 4.01
4106 4566 0.249120 TCGTGGTAGACATGGCAAGG 59.751 55.000 0.00 0.00 36.71 3.61
4111 4571 4.067896 GTGGTAGACATGGCAAGGATATG 58.932 47.826 0.00 0.00 0.00 1.78
4112 4572 3.072915 TGGTAGACATGGCAAGGATATGG 59.927 47.826 0.00 0.00 0.00 2.74
4113 4573 3.327757 GGTAGACATGGCAAGGATATGGA 59.672 47.826 0.00 0.00 0.00 3.41
4167 4903 8.373048 TGATTGTACTTGTAACAAGAAATCGT 57.627 30.769 0.00 0.00 40.00 3.73
4197 4937 5.008613 TGTTGTTGCATCTTTGAAGTACTCC 59.991 40.000 0.00 0.00 0.00 3.85
4198 4938 4.072131 TGTTGCATCTTTGAAGTACTCCC 58.928 43.478 0.00 0.00 0.00 4.30
4199 4939 4.202461 TGTTGCATCTTTGAAGTACTCCCT 60.202 41.667 0.00 0.00 0.00 4.20
4200 4940 4.207891 TGCATCTTTGAAGTACTCCCTC 57.792 45.455 0.00 0.00 0.00 4.30
4201 4941 3.055094 TGCATCTTTGAAGTACTCCCTCC 60.055 47.826 0.00 0.00 0.00 4.30
4202 4942 3.786635 CATCTTTGAAGTACTCCCTCCG 58.213 50.000 0.00 0.00 0.00 4.63
4203 4943 2.885616 TCTTTGAAGTACTCCCTCCGT 58.114 47.619 0.00 0.00 0.00 4.69
4204 4944 2.824341 TCTTTGAAGTACTCCCTCCGTC 59.176 50.000 0.00 0.00 0.00 4.79
4205 4945 1.553706 TTGAAGTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
4206 4946 0.679002 TGAAGTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
4207 4947 1.379576 AAGTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
4208 4948 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
4209 4949 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4210 4950 0.754587 GTACTCCCTCCGTCCGGAAT 60.755 60.000 5.23 0.00 44.66 3.01
4211 4951 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
4212 4952 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
4213 4953 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
4214 4954 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
4215 4955 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
4216 4956 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4217 4957 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4218 4958 2.354403 CCTCCGTCCGGAATTACTTGTT 60.354 50.000 5.23 0.00 44.66 2.83
4219 4959 2.671396 CTCCGTCCGGAATTACTTGTTG 59.329 50.000 5.23 0.00 44.66 3.33
4220 4960 1.129811 CCGTCCGGAATTACTTGTTGC 59.870 52.381 5.23 0.00 37.50 4.17
4221 4961 1.801771 CGTCCGGAATTACTTGTTGCA 59.198 47.619 5.23 0.00 0.00 4.08
4222 4962 2.418628 CGTCCGGAATTACTTGTTGCAT 59.581 45.455 5.23 0.00 0.00 3.96
4223 4963 3.619483 CGTCCGGAATTACTTGTTGCATA 59.381 43.478 5.23 0.00 0.00 3.14
4224 4964 4.093703 CGTCCGGAATTACTTGTTGCATAA 59.906 41.667 5.23 0.00 0.00 1.90
4225 4965 5.391097 CGTCCGGAATTACTTGTTGCATAAA 60.391 40.000 5.23 0.00 0.00 1.40
4226 4966 6.560711 GTCCGGAATTACTTGTTGCATAAAT 58.439 36.000 5.23 0.00 0.00 1.40
4227 4967 6.472163 GTCCGGAATTACTTGTTGCATAAATG 59.528 38.462 5.23 0.00 0.00 2.32
4228 4968 6.375736 TCCGGAATTACTTGTTGCATAAATGA 59.624 34.615 0.00 0.00 0.00 2.57
4229 4969 7.032580 CCGGAATTACTTGTTGCATAAATGAA 58.967 34.615 0.00 0.00 0.00 2.57
4230 4970 7.706179 CCGGAATTACTTGTTGCATAAATGAAT 59.294 33.333 0.00 0.00 0.00 2.57
4231 4971 9.729023 CGGAATTACTTGTTGCATAAATGAATA 57.271 29.630 0.00 0.00 0.00 1.75
4283 5023 7.653647 ACGTCTAGATACATTCATTTCTCTCC 58.346 38.462 0.00 0.00 0.00 3.71
4284 5024 6.799441 CGTCTAGATACATTCATTTCTCTCCG 59.201 42.308 0.00 0.00 0.00 4.63
4285 5025 7.308049 CGTCTAGATACATTCATTTCTCTCCGA 60.308 40.741 0.00 0.00 0.00 4.55
4286 5026 7.806014 GTCTAGATACATTCATTTCTCTCCGAC 59.194 40.741 0.00 0.00 0.00 4.79
4287 5027 6.471233 AGATACATTCATTTCTCTCCGACA 57.529 37.500 0.00 0.00 0.00 4.35
4288 5028 6.878317 AGATACATTCATTTCTCTCCGACAA 58.122 36.000 0.00 0.00 0.00 3.18
4289 5029 6.983307 AGATACATTCATTTCTCTCCGACAAG 59.017 38.462 0.00 0.00 0.00 3.16
4290 5030 4.899502 ACATTCATTTCTCTCCGACAAGT 58.100 39.130 0.00 0.00 0.00 3.16
4291 5031 6.037786 ACATTCATTTCTCTCCGACAAGTA 57.962 37.500 0.00 0.00 0.00 2.24
4292 5032 6.644347 ACATTCATTTCTCTCCGACAAGTAT 58.356 36.000 0.00 0.00 0.00 2.12
4293 5033 7.106239 ACATTCATTTCTCTCCGACAAGTATT 58.894 34.615 0.00 0.00 0.00 1.89
4294 5034 7.607991 ACATTCATTTCTCTCCGACAAGTATTT 59.392 33.333 0.00 0.00 0.00 1.40
4295 5035 7.596749 TTCATTTCTCTCCGACAAGTATTTC 57.403 36.000 0.00 0.00 0.00 2.17
4296 5036 6.106673 TCATTTCTCTCCGACAAGTATTTCC 58.893 40.000 0.00 0.00 0.00 3.13
4297 5037 3.777465 TCTCTCCGACAAGTATTTCCG 57.223 47.619 0.00 0.00 0.00 4.30
4298 5038 2.426024 TCTCTCCGACAAGTATTTCCGG 59.574 50.000 0.00 0.00 41.36 5.14
4299 5039 2.426024 CTCTCCGACAAGTATTTCCGGA 59.574 50.000 0.00 0.00 45.74 5.14
4300 5040 3.028850 TCTCCGACAAGTATTTCCGGAT 58.971 45.455 4.15 0.00 46.53 4.18
4301 5041 3.123804 CTCCGACAAGTATTTCCGGATG 58.876 50.000 4.15 0.97 46.53 3.51
4302 5042 2.159014 TCCGACAAGTATTTCCGGATGG 60.159 50.000 4.15 0.00 43.47 3.51
4303 5043 2.159014 CCGACAAGTATTTCCGGATGGA 60.159 50.000 4.15 0.00 44.61 3.41
4418 5158 7.517898 ACTGATGGCTATCTATCTACCTCTA 57.482 40.000 11.68 0.00 34.31 2.43
4518 5258 5.218885 TGGAACAAATTTTACATCTGTGCG 58.781 37.500 0.00 0.00 31.92 5.34
4545 5285 4.148079 TCTGTCTATGCCCTCTCATACTG 58.852 47.826 0.00 0.00 0.00 2.74
4632 5372 0.401395 TCCCCCTCTGGTCTGTTGTT 60.401 55.000 0.00 0.00 0.00 2.83
4671 5411 1.069935 GGCTCTATCCCACTTCCGC 59.930 63.158 0.00 0.00 0.00 5.54
4698 5438 5.994054 TGAGAAAGAATCACCAGAAACAGAG 59.006 40.000 0.00 0.00 0.00 3.35
4893 5633 3.365535 GCATTGGCCAAGAACGGT 58.634 55.556 24.94 2.19 0.00 4.83
4980 5720 1.517361 TGCCCTAGTGATGCAGACG 59.483 57.895 0.00 0.00 0.00 4.18
5185 5926 2.224137 CCATTGCGAGCTCTTCTGGATA 60.224 50.000 12.85 0.00 0.00 2.59
5232 5973 5.008811 AGCTCATAGATTGTGTCTACGGTAC 59.991 44.000 0.00 0.00 42.06 3.34
5242 5983 3.423206 GTGTCTACGGTACTTGTTTGACG 59.577 47.826 0.00 0.00 0.00 4.35
5254 5995 6.684609 ACTTGTTTGACGTTTCTGTTTTTC 57.315 33.333 0.00 0.00 0.00 2.29
5255 5996 5.631929 ACTTGTTTGACGTTTCTGTTTTTCC 59.368 36.000 0.00 0.00 0.00 3.13
5256 5997 4.487019 TGTTTGACGTTTCTGTTTTTCCC 58.513 39.130 0.00 0.00 0.00 3.97
5262 6003 3.452990 ACGTTTCTGTTTTTCCCCCAAAT 59.547 39.130 0.00 0.00 0.00 2.32
5340 6081 5.832595 TGTGAGGGAAAATCTGTTCATCAAA 59.167 36.000 0.00 0.00 30.88 2.69
5351 6092 2.754552 TGTTCATCAAATGCTAGGCCAC 59.245 45.455 5.01 0.00 0.00 5.01
5355 6096 2.018542 TCAAATGCTAGGCCACGTAC 57.981 50.000 5.01 0.00 0.00 3.67
5356 6097 0.650512 CAAATGCTAGGCCACGTACG 59.349 55.000 15.01 15.01 0.00 3.67
5357 6098 0.248289 AAATGCTAGGCCACGTACGT 59.752 50.000 16.72 16.72 0.00 3.57
5358 6099 1.105457 AATGCTAGGCCACGTACGTA 58.895 50.000 22.34 3.87 0.00 3.57
5359 6100 0.666913 ATGCTAGGCCACGTACGTAG 59.333 55.000 22.34 15.72 0.00 3.51
5361 6102 0.248377 GCTAGGCCACGTACGTAGTG 60.248 60.000 22.34 13.50 45.73 2.74
5562 6360 2.674852 CGATCCTGAATGACAACCACAG 59.325 50.000 0.00 0.00 0.00 3.66
5633 6434 7.551035 TTCCTCGTAATCTACTGTTCTACTC 57.449 40.000 0.00 0.00 0.00 2.59
5634 6435 6.054295 TCCTCGTAATCTACTGTTCTACTCC 58.946 44.000 0.00 0.00 0.00 3.85
5635 6436 5.239087 CCTCGTAATCTACTGTTCTACTCCC 59.761 48.000 0.00 0.00 0.00 4.30
5637 6438 6.054295 TCGTAATCTACTGTTCTACTCCCTC 58.946 44.000 0.00 0.00 0.00 4.30
5639 6440 3.278668 TCTACTGTTCTACTCCCTCCG 57.721 52.381 0.00 0.00 0.00 4.63
5640 6441 1.677052 CTACTGTTCTACTCCCTCCGC 59.323 57.143 0.00 0.00 0.00 5.54
5641 6442 0.251653 ACTGTTCTACTCCCTCCGCA 60.252 55.000 0.00 0.00 0.00 5.69
5642 6443 0.895530 CTGTTCTACTCCCTCCGCAA 59.104 55.000 0.00 0.00 0.00 4.85
5643 6444 1.275291 CTGTTCTACTCCCTCCGCAAA 59.725 52.381 0.00 0.00 0.00 3.68
5644 6445 1.001633 TGTTCTACTCCCTCCGCAAAC 59.998 52.381 0.00 0.00 0.00 2.93
5645 6446 1.275573 GTTCTACTCCCTCCGCAAACT 59.724 52.381 0.00 0.00 0.00 2.66
5646 6447 2.494870 GTTCTACTCCCTCCGCAAACTA 59.505 50.000 0.00 0.00 0.00 2.24
5647 6448 2.811410 TCTACTCCCTCCGCAAACTAA 58.189 47.619 0.00 0.00 0.00 2.24
5648 6449 3.371965 TCTACTCCCTCCGCAAACTAAT 58.628 45.455 0.00 0.00 0.00 1.73
5649 6450 4.539726 TCTACTCCCTCCGCAAACTAATA 58.460 43.478 0.00 0.00 0.00 0.98
5650 6451 5.145564 TCTACTCCCTCCGCAAACTAATAT 58.854 41.667 0.00 0.00 0.00 1.28
5651 6452 6.309357 TCTACTCCCTCCGCAAACTAATATA 58.691 40.000 0.00 0.00 0.00 0.86
5652 6453 5.881923 ACTCCCTCCGCAAACTAATATAA 57.118 39.130 0.00 0.00 0.00 0.98
5653 6454 6.243216 ACTCCCTCCGCAAACTAATATAAA 57.757 37.500 0.00 0.00 0.00 1.40
5654 6455 6.655930 ACTCCCTCCGCAAACTAATATAAAA 58.344 36.000 0.00 0.00 0.00 1.52
5655 6456 6.766467 ACTCCCTCCGCAAACTAATATAAAAG 59.234 38.462 0.00 0.00 0.00 2.27
5656 6457 5.529800 TCCCTCCGCAAACTAATATAAAAGC 59.470 40.000 0.00 0.00 0.00 3.51
5657 6458 5.440685 CCTCCGCAAACTAATATAAAAGCG 58.559 41.667 0.00 0.00 43.13 4.68
5658 6459 5.007332 CCTCCGCAAACTAATATAAAAGCGT 59.993 40.000 0.00 0.00 42.08 5.07
5659 6460 6.425577 TCCGCAAACTAATATAAAAGCGTT 57.574 33.333 0.00 0.00 42.08 4.84
5660 6461 6.844254 TCCGCAAACTAATATAAAAGCGTTT 58.156 32.000 2.53 2.53 42.08 3.60
5661 6462 7.972527 TCCGCAAACTAATATAAAAGCGTTTA 58.027 30.769 7.30 7.30 42.08 2.01
5662 6463 8.117988 TCCGCAAACTAATATAAAAGCGTTTAG 58.882 33.333 10.55 1.25 42.08 1.85
5663 6464 8.117988 CCGCAAACTAATATAAAAGCGTTTAGA 58.882 33.333 10.55 6.46 42.08 2.10
5664 6465 9.646336 CGCAAACTAATATAAAAGCGTTTAGAT 57.354 29.630 10.55 8.48 39.18 1.98
5675 6476 6.481954 AAAGCGTTTAGATCACTAAAGTGG 57.518 37.500 10.11 0.00 45.42 4.00
5676 6477 5.148651 AGCGTTTAGATCACTAAAGTGGT 57.851 39.130 10.11 2.63 45.42 4.16
5677 6478 4.929808 AGCGTTTAGATCACTAAAGTGGTG 59.070 41.667 10.11 0.00 45.42 4.17
5678 6479 4.927425 GCGTTTAGATCACTAAAGTGGTGA 59.073 41.667 10.11 0.25 45.42 4.02
5687 6488 4.927425 TCACTAAAGTGGTGATCTAAACGC 59.073 41.667 10.11 0.00 45.65 4.84
5688 6489 4.929808 CACTAAAGTGGTGATCTAAACGCT 59.070 41.667 2.01 0.00 42.10 5.07
5689 6490 5.062308 CACTAAAGTGGTGATCTAAACGCTC 59.938 44.000 2.01 0.00 42.10 5.03
5690 6491 3.963428 AAGTGGTGATCTAAACGCTCT 57.037 42.857 0.00 0.00 0.00 4.09
5691 6492 3.963428 AGTGGTGATCTAAACGCTCTT 57.037 42.857 0.00 0.00 0.00 2.85
5692 6493 5.401531 AAGTGGTGATCTAAACGCTCTTA 57.598 39.130 0.00 0.00 0.00 2.10
5693 6494 5.599999 AGTGGTGATCTAAACGCTCTTAT 57.400 39.130 0.00 0.00 0.00 1.73
5694 6495 6.710597 AGTGGTGATCTAAACGCTCTTATA 57.289 37.500 0.00 0.00 0.00 0.98
5695 6496 7.291411 AGTGGTGATCTAAACGCTCTTATAT 57.709 36.000 0.00 0.00 0.00 0.86
5696 6497 7.727181 AGTGGTGATCTAAACGCTCTTATATT 58.273 34.615 0.00 0.00 0.00 1.28
5697 6498 8.857098 AGTGGTGATCTAAACGCTCTTATATTA 58.143 33.333 0.00 0.00 0.00 0.98
5698 6499 9.130312 GTGGTGATCTAAACGCTCTTATATTAG 57.870 37.037 0.00 0.00 0.00 1.73
5699 6500 8.857098 TGGTGATCTAAACGCTCTTATATTAGT 58.143 33.333 0.00 0.00 0.00 2.24
5700 6501 9.694137 GGTGATCTAAACGCTCTTATATTAGTT 57.306 33.333 0.00 0.00 0.00 2.24
5709 6510 9.953697 AACGCTCTTATATTAGTTTACAGAGAG 57.046 33.333 0.00 0.00 34.15 3.20
5710 6511 9.339850 ACGCTCTTATATTAGTTTACAGAGAGA 57.660 33.333 4.35 0.00 32.80 3.10
5711 6512 9.820229 CGCTCTTATATTAGTTTACAGAGAGAG 57.180 37.037 0.00 0.00 30.76 3.20
5796 6601 4.037327 TGATTGATGGCAAGTTTTGTCGAA 59.963 37.500 0.00 0.00 38.34 3.71
5807 6612 7.270579 GGCAAGTTTTGTCGAACTATTGATTAC 59.729 37.037 0.00 0.00 38.86 1.89
5808 6613 8.015658 GCAAGTTTTGTCGAACTATTGATTACT 58.984 33.333 0.00 0.00 38.86 2.24
5811 6616 9.148104 AGTTTTGTCGAACTATTGATTACTACC 57.852 33.333 0.00 0.00 38.06 3.18
5812 6617 9.148104 GTTTTGTCGAACTATTGATTACTACCT 57.852 33.333 0.00 0.00 0.00 3.08
5813 6618 9.715121 TTTTGTCGAACTATTGATTACTACCTT 57.285 29.630 0.00 0.00 0.00 3.50
5814 6619 8.922058 TTGTCGAACTATTGATTACTACCTTC 57.078 34.615 0.00 0.00 0.00 3.46
5815 6620 7.191551 TGTCGAACTATTGATTACTACCTTCG 58.808 38.462 0.00 0.00 0.00 3.79
5816 6621 7.148188 TGTCGAACTATTGATTACTACCTTCGT 60.148 37.037 0.00 0.00 32.02 3.85
5817 6622 7.699812 GTCGAACTATTGATTACTACCTTCGTT 59.300 37.037 0.00 0.00 32.02 3.85
5818 6623 7.912250 TCGAACTATTGATTACTACCTTCGTTC 59.088 37.037 0.00 0.00 32.02 3.95
5819 6624 7.167136 CGAACTATTGATTACTACCTTCGTTCC 59.833 40.741 0.00 0.00 0.00 3.62
5820 6625 7.657023 ACTATTGATTACTACCTTCGTTCCT 57.343 36.000 0.00 0.00 0.00 3.36
5821 6626 8.757982 ACTATTGATTACTACCTTCGTTCCTA 57.242 34.615 0.00 0.00 0.00 2.94
5822 6627 9.193806 ACTATTGATTACTACCTTCGTTCCTAA 57.806 33.333 0.00 0.00 0.00 2.69
5832 6637 9.418839 ACTACCTTCGTTCCTAAATATAAGTCT 57.581 33.333 0.00 0.00 0.00 3.24
5835 6640 9.379791 ACCTTCGTTCCTAAATATAAGTCTTTG 57.620 33.333 0.00 0.00 0.00 2.77
5836 6641 9.379791 CCTTCGTTCCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
5854 6659 9.606631 AGTCTTTGTAGAGATTTCATTATGGAC 57.393 33.333 0.00 0.00 0.00 4.02
5855 6660 9.383519 GTCTTTGTAGAGATTTCATTATGGACA 57.616 33.333 0.00 0.00 0.00 4.02
5856 6661 9.958180 TCTTTGTAGAGATTTCATTATGGACAA 57.042 29.630 0.00 0.00 0.00 3.18
5857 6662 9.994432 CTTTGTAGAGATTTCATTATGGACAAC 57.006 33.333 0.00 0.00 0.00 3.32
5858 6663 9.513906 TTTGTAGAGATTTCATTATGGACAACA 57.486 29.630 0.00 0.00 0.00 3.33
5859 6664 9.685276 TTGTAGAGATTTCATTATGGACAACAT 57.315 29.630 0.00 0.00 43.68 2.71
5862 6667 8.370493 AGAGATTTCATTATGGACAACATACG 57.630 34.615 0.00 0.00 41.61 3.06
5863 6668 7.442364 AGAGATTTCATTATGGACAACATACGG 59.558 37.037 0.00 0.00 41.61 4.02
5864 6669 7.279615 AGATTTCATTATGGACAACATACGGA 58.720 34.615 0.00 0.00 41.61 4.69
5865 6670 7.939039 AGATTTCATTATGGACAACATACGGAT 59.061 33.333 0.00 0.00 41.61 4.18
5866 6671 6.859420 TTCATTATGGACAACATACGGATG 57.141 37.500 5.94 5.94 41.61 3.51
5868 6673 7.056844 TCATTATGGACAACATACGGATGTA 57.943 36.000 15.10 0.00 45.93 2.29
5869 6674 7.676004 TCATTATGGACAACATACGGATGTAT 58.324 34.615 15.10 5.31 45.93 2.29
5870 6675 7.817478 TCATTATGGACAACATACGGATGTATC 59.183 37.037 15.10 14.47 45.93 2.24
5871 6676 5.808366 ATGGACAACATACGGATGTATCT 57.192 39.130 15.10 0.00 45.93 1.98
5872 6677 6.911250 ATGGACAACATACGGATGTATCTA 57.089 37.500 15.10 13.10 45.93 1.98
5873 6678 6.327279 TGGACAACATACGGATGTATCTAG 57.673 41.667 15.10 4.73 45.93 2.43
5874 6679 6.066032 TGGACAACATACGGATGTATCTAGA 58.934 40.000 15.10 0.00 45.93 2.43
5875 6680 6.719829 TGGACAACATACGGATGTATCTAGAT 59.280 38.462 15.10 10.73 45.93 1.98
5876 6681 7.030165 GGACAACATACGGATGTATCTAGATG 58.970 42.308 15.10 9.24 45.93 2.90
5877 6682 6.390721 ACAACATACGGATGTATCTAGATGC 58.609 40.000 15.10 14.54 45.93 3.91
5878 6683 6.015434 ACAACATACGGATGTATCTAGATGCA 60.015 38.462 23.38 23.38 45.93 3.96
5879 6684 6.782082 ACATACGGATGTATCTAGATGCAT 57.218 37.500 29.54 29.54 44.77 3.96
5880 6685 7.175347 ACATACGGATGTATCTAGATGCATT 57.825 36.000 29.66 19.73 44.77 3.56
5881 6686 7.615403 ACATACGGATGTATCTAGATGCATTT 58.385 34.615 29.66 21.00 44.77 2.32
5882 6687 8.097038 ACATACGGATGTATCTAGATGCATTTT 58.903 33.333 29.66 20.74 44.77 1.82
5883 6688 9.586435 CATACGGATGTATCTAGATGCATTTTA 57.414 33.333 29.66 21.80 42.77 1.52
5884 6689 9.809096 ATACGGATGTATCTAGATGCATTTTAG 57.191 33.333 29.66 22.88 42.77 1.85
5885 6690 7.896811 ACGGATGTATCTAGATGCATTTTAGA 58.103 34.615 29.66 18.53 42.77 2.10
5886 6691 8.031864 ACGGATGTATCTAGATGCATTTTAGAG 58.968 37.037 29.66 20.36 42.77 2.43
5887 6692 8.031864 CGGATGTATCTAGATGCATTTTAGAGT 58.968 37.037 29.66 12.13 42.77 3.24
5910 6715 9.173939 GAGTATAAATTCATTCATTTTGCTCCG 57.826 33.333 0.00 0.00 0.00 4.63
5911 6716 8.686334 AGTATAAATTCATTCATTTTGCTCCGT 58.314 29.630 0.00 0.00 0.00 4.69
5912 6717 9.944663 GTATAAATTCATTCATTTTGCTCCGTA 57.055 29.630 0.00 0.00 0.00 4.02
5914 6719 7.760131 AAATTCATTCATTTTGCTCCGTATG 57.240 32.000 0.00 0.00 0.00 2.39
5915 6720 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
5916 6721 5.895636 TCATTCATTTTGCTCCGTATGTT 57.104 34.783 0.00 0.00 0.00 2.71
5917 6722 5.639757 TCATTCATTTTGCTCCGTATGTTG 58.360 37.500 0.00 0.00 0.00 3.33
5918 6723 5.182950 TCATTCATTTTGCTCCGTATGTTGT 59.817 36.000 0.00 0.00 0.00 3.32
5919 6724 4.678509 TCATTTTGCTCCGTATGTTGTC 57.321 40.909 0.00 0.00 0.00 3.18
5920 6725 4.323417 TCATTTTGCTCCGTATGTTGTCT 58.677 39.130 0.00 0.00 0.00 3.41
5921 6726 4.154015 TCATTTTGCTCCGTATGTTGTCTG 59.846 41.667 0.00 0.00 0.00 3.51
5922 6727 2.093306 TTGCTCCGTATGTTGTCTGG 57.907 50.000 0.00 0.00 0.00 3.86
5923 6728 1.262417 TGCTCCGTATGTTGTCTGGA 58.738 50.000 0.00 0.00 0.00 3.86
5924 6729 1.621317 TGCTCCGTATGTTGTCTGGAA 59.379 47.619 0.00 0.00 0.00 3.53
5925 6730 2.236146 TGCTCCGTATGTTGTCTGGAAT 59.764 45.455 0.00 0.00 0.00 3.01
5926 6731 2.866762 GCTCCGTATGTTGTCTGGAATC 59.133 50.000 0.00 0.00 0.00 2.52
5927 6732 3.430929 GCTCCGTATGTTGTCTGGAATCT 60.431 47.826 0.00 0.00 0.00 2.40
5928 6733 4.759782 CTCCGTATGTTGTCTGGAATCTT 58.240 43.478 0.00 0.00 0.00 2.40
5929 6734 5.160607 TCCGTATGTTGTCTGGAATCTTT 57.839 39.130 0.00 0.00 0.00 2.52
5930 6735 5.556915 TCCGTATGTTGTCTGGAATCTTTT 58.443 37.500 0.00 0.00 0.00 2.27
5931 6736 5.642063 TCCGTATGTTGTCTGGAATCTTTTC 59.358 40.000 0.00 0.00 0.00 2.29
5932 6737 5.411361 CCGTATGTTGTCTGGAATCTTTTCA 59.589 40.000 0.00 0.00 33.23 2.69
5933 6738 6.072728 CCGTATGTTGTCTGGAATCTTTTCAA 60.073 38.462 0.00 0.00 33.23 2.69
5934 6739 7.359595 CGTATGTTGTCTGGAATCTTTTCAAA 58.640 34.615 0.00 0.00 33.23 2.69
5935 6740 7.535258 CGTATGTTGTCTGGAATCTTTTCAAAG 59.465 37.037 0.00 0.00 37.36 2.77
5937 6742 6.795399 TGTTGTCTGGAATCTTTTCAAAGAC 58.205 36.000 4.08 11.11 46.80 3.01
5938 6743 6.603201 TGTTGTCTGGAATCTTTTCAAAGACT 59.397 34.615 4.08 0.00 46.80 3.24
5939 6744 7.122650 TGTTGTCTGGAATCTTTTCAAAGACTT 59.877 33.333 4.08 1.48 46.80 3.01
5940 6745 8.621286 GTTGTCTGGAATCTTTTCAAAGACTTA 58.379 33.333 4.08 6.96 46.80 2.24
5941 6746 8.924511 TGTCTGGAATCTTTTCAAAGACTTAT 57.075 30.769 4.08 0.00 46.80 1.73
5954 6759 9.947433 TTTCAAAGACTTATATTTAGGAACGGA 57.053 29.630 0.00 0.00 0.00 4.69
5955 6760 9.595823 TTCAAAGACTTATATTTAGGAACGGAG 57.404 33.333 0.00 0.00 0.00 4.63
5956 6761 8.202137 TCAAAGACTTATATTTAGGAACGGAGG 58.798 37.037 0.00 0.00 0.00 4.30
5957 6762 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5958 6763 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5959 6764 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5966 6771 3.629142 AGGAACGGAGGGAGTATTTTG 57.371 47.619 0.00 0.00 0.00 2.44
5967 6772 2.910977 AGGAACGGAGGGAGTATTTTGT 59.089 45.455 0.00 0.00 0.00 2.83
5973 6778 4.344390 ACGGAGGGAGTATTTTGTATCTCC 59.656 45.833 0.00 0.00 43.84 3.71
5976 6781 6.526526 GGAGGGAGTATTTTGTATCTCCTTC 58.473 44.000 11.84 11.84 45.88 3.46
6041 6846 3.634397 TTCCATTCAGAAGAAGCCGAT 57.366 42.857 0.00 0.00 37.14 4.18
6057 6862 2.094234 GCCGATGGTTGCTTGGTTTATT 60.094 45.455 0.00 0.00 0.00 1.40
6058 6863 3.510719 CCGATGGTTGCTTGGTTTATTG 58.489 45.455 0.00 0.00 0.00 1.90
6079 6884 3.011085 GGAAACCGTCCGAAAACCT 57.989 52.632 0.00 0.00 36.40 3.50
6080 6885 0.589708 GGAAACCGTCCGAAAACCTG 59.410 55.000 0.00 0.00 36.40 4.00
6081 6886 1.302366 GAAACCGTCCGAAAACCTGT 58.698 50.000 0.00 0.00 0.00 4.00
6082 6887 2.482864 GAAACCGTCCGAAAACCTGTA 58.517 47.619 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 2.989840 GTCGTGAACTTGGAGTGATCAG 59.010 50.000 0.00 0.00 0.00 2.90
266 267 4.329545 GACTCGGGTGCCAGCCAA 62.330 66.667 14.21 0.00 34.89 4.52
322 323 2.671070 CACCTCCCCGCATGTTCT 59.329 61.111 0.00 0.00 0.00 3.01
346 347 5.163426 CCATTCTCATCTCTACAGAGTGCTT 60.163 44.000 6.16 0.00 42.60 3.91
380 656 4.640690 ACCACTGCCGAGGACCCT 62.641 66.667 0.00 0.00 0.00 4.34
465 741 2.884012 AGTCGTGAGCATCTAGATCAGG 59.116 50.000 1.03 5.29 44.51 3.86
473 749 2.549754 CAAAACCAAGTCGTGAGCATCT 59.450 45.455 0.00 0.00 34.92 2.90
661 937 9.190317 CATGTCTGCCTATACCTAGATTACATA 57.810 37.037 0.00 0.00 0.00 2.29
733 1009 9.075519 CGCATGCTTTATTGAATAAGAGAAAAA 57.924 29.630 17.13 0.00 0.00 1.94
734 1010 8.458052 TCGCATGCTTTATTGAATAAGAGAAAA 58.542 29.630 17.13 0.00 0.00 2.29
799 1075 3.097830 TGGTGGTGGGTCCCGTTT 61.098 61.111 2.65 0.00 34.77 3.60
857 1134 4.383602 CCGACGCGTTGGGCAAAG 62.384 66.667 33.96 10.51 43.84 2.77
1126 1409 2.909965 GAGGAGGAGCGCGAGGAT 60.910 66.667 12.10 0.00 0.00 3.24
1224 1507 1.694169 GGCCATGGAAGGGGAGAGA 60.694 63.158 18.40 0.00 38.99 3.10
1392 1675 4.903010 GGCGCGGCGATAAGGGAA 62.903 66.667 28.54 0.00 0.00 3.97
1617 1900 3.113745 CCCATGCCATTCGCTGTC 58.886 61.111 0.00 0.00 38.78 3.51
1618 1901 3.142838 GCCCATGCCATTCGCTGT 61.143 61.111 0.00 0.00 38.78 4.40
1845 2128 9.112725 ACCAAGTATTTAACAGTTTAAACGAGT 57.887 29.630 12.54 12.22 39.47 4.18
1846 2129 9.940166 AACCAAGTATTTAACAGTTTAAACGAG 57.060 29.630 12.54 11.62 39.47 4.18
1886 2169 0.916086 ACTCACCCCACTGACAACAA 59.084 50.000 0.00 0.00 0.00 2.83
2249 2618 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2250 2619 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2251 2620 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2252 2621 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2253 2622 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2254 2623 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2255 2624 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2256 2625 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2257 2626 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2258 2627 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2259 2628 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2260 2629 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2261 2630 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2268 2637 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2269 2638 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
2270 2639 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
2271 2640 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
2272 2641 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
2273 2642 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
2276 2645 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
2282 2651 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
2290 2659 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
2331 2700 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
2332 2701 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
2333 2702 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
2334 2703 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
2335 2704 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
2336 2705 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
2337 2706 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2338 2707 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2339 2708 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2340 2709 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2341 2710 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2342 2711 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2343 2712 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2344 2713 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2345 2714 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2346 2715 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2347 2716 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2348 2717 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2349 2718 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2350 2719 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2351 2720 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2352 2721 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2353 2722 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2354 2723 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2355 2724 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2356 2725 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
2357 2726 1.856629 ATTACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
2358 2727 2.734755 TATTACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
2359 2728 2.965671 ATATTACTCCCTCCGTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
2360 2729 6.183360 CCTTTATATATTACTCCCTCCGTCCG 60.183 46.154 0.00 0.00 0.00 4.79
2361 2730 6.406737 GCCTTTATATATTACTCCCTCCGTCC 60.407 46.154 0.00 0.00 0.00 4.79
2362 2731 6.154021 TGCCTTTATATATTACTCCCTCCGTC 59.846 42.308 0.00 0.00 0.00 4.79
2363 2732 6.021030 TGCCTTTATATATTACTCCCTCCGT 58.979 40.000 0.00 0.00 0.00 4.69
2364 2733 6.154706 ACTGCCTTTATATATTACTCCCTCCG 59.845 42.308 0.00 0.00 0.00 4.63
2365 2734 7.497773 ACTGCCTTTATATATTACTCCCTCC 57.502 40.000 0.00 0.00 0.00 4.30
2367 2736 9.617053 ACTTACTGCCTTTATATATTACTCCCT 57.383 33.333 0.00 0.00 0.00 4.20
2368 2737 9.872721 GACTTACTGCCTTTATATATTACTCCC 57.127 37.037 0.00 0.00 0.00 4.30
2447 2818 6.767456 AGAAAGTGGGTATCTGATGATCATC 58.233 40.000 25.91 25.91 38.29 2.92
2458 2829 4.846168 AGAGGGAAAGAAAGTGGGTATC 57.154 45.455 0.00 0.00 0.00 2.24
2475 2846 2.777832 AAGCAGCTACAGGAAAGAGG 57.222 50.000 0.00 0.00 0.00 3.69
2576 2981 3.706373 ACAGGTGCGTGGCTAGGG 61.706 66.667 0.00 0.00 0.00 3.53
2661 3066 1.915141 AATGTCCAAACAGCCAGGAG 58.085 50.000 0.00 0.00 39.20 3.69
2705 3110 0.897863 GCCCATGCAACAGTTACCCA 60.898 55.000 0.00 0.00 37.47 4.51
2779 3184 7.875316 TCTAGTCTTCTCAAACGAAAAGATG 57.125 36.000 0.00 0.00 31.01 2.90
2829 3234 8.880878 AACTTTTACTGTTTGTTCACTTTGTT 57.119 26.923 0.00 0.00 0.00 2.83
2833 3239 9.135843 GCTTTAACTTTTACTGTTTGTTCACTT 57.864 29.630 0.00 0.00 0.00 3.16
2956 3362 9.495572 CTGATTGGTAAGAGTTAAAGAGTCTTT 57.504 33.333 21.35 21.35 43.91 2.52
2963 3369 7.648142 TGCAAACTGATTGGTAAGAGTTAAAG 58.352 34.615 0.00 0.00 39.54 1.85
3062 3468 5.464168 GCATATGTTCACCATCCAATTAGC 58.536 41.667 4.29 0.00 34.86 3.09
3110 3516 5.181245 ACTTTGTGGTTCCGTTATCATCTTG 59.819 40.000 0.00 0.00 0.00 3.02
3150 3557 3.131933 CCACCTATCTGAGTGTTCTCCAG 59.868 52.174 0.00 0.00 39.75 3.86
3346 3755 2.170166 TGTATCCTTCGGTTACACGGT 58.830 47.619 0.84 0.00 34.25 4.83
3348 3757 5.789710 AAAATGTATCCTTCGGTTACACG 57.210 39.130 6.08 0.00 39.65 4.49
3349 3758 6.314400 TGCTAAAATGTATCCTTCGGTTACAC 59.686 38.462 6.08 0.00 39.65 2.90
3350 3759 6.408035 TGCTAAAATGTATCCTTCGGTTACA 58.592 36.000 6.34 6.34 40.64 2.41
3351 3760 6.537660 ACTGCTAAAATGTATCCTTCGGTTAC 59.462 38.462 0.00 0.00 0.00 2.50
3400 3809 8.954350 CCCTCATATTTGATCACTTTATCATCC 58.046 37.037 0.00 0.00 35.84 3.51
3656 4069 7.237173 GTCGTCAAATGTTAAGAATGAGGAAG 58.763 38.462 12.56 0.00 36.87 3.46
3680 4093 2.878406 AGCTGTTTGAAACTATGTGCGT 59.122 40.909 9.69 0.00 0.00 5.24
3687 4100 8.220755 ACAAGATTGTAAGCTGTTTGAAACTA 57.779 30.769 9.69 0.00 40.16 2.24
3688 4101 7.100458 ACAAGATTGTAAGCTGTTTGAAACT 57.900 32.000 9.69 0.00 40.16 2.66
3749 4162 4.882559 TCAAATGAAAGGCTTATCCCCAT 58.117 39.130 0.00 0.00 34.51 4.00
3752 4165 5.921962 AGTTCAAATGAAAGGCTTATCCC 57.078 39.130 0.00 0.00 35.58 3.85
3804 4218 6.604795 AGCAAAATATAGAAGTCCATTGCACT 59.395 34.615 9.46 0.00 43.12 4.40
3805 4219 6.799512 AGCAAAATATAGAAGTCCATTGCAC 58.200 36.000 9.46 0.00 43.12 4.57
3806 4220 8.570488 CATAGCAAAATATAGAAGTCCATTGCA 58.430 33.333 9.46 0.00 43.12 4.08
3807 4221 7.540055 GCATAGCAAAATATAGAAGTCCATTGC 59.460 37.037 0.00 0.00 41.52 3.56
3808 4222 8.570488 TGCATAGCAAAATATAGAAGTCCATTG 58.430 33.333 0.00 0.00 34.76 2.82
3809 4223 8.696043 TGCATAGCAAAATATAGAAGTCCATT 57.304 30.769 0.00 0.00 34.76 3.16
3810 4224 8.874744 ATGCATAGCAAAATATAGAAGTCCAT 57.125 30.769 0.00 0.00 43.62 3.41
4019 4435 9.578439 CACGATTCATCATAATCTTGCTATCTA 57.422 33.333 0.00 0.00 34.34 1.98
4078 4495 4.098044 CCATGTCTACCACGATGTTCTAGT 59.902 45.833 0.00 0.00 0.00 2.57
4079 4496 4.611943 CCATGTCTACCACGATGTTCTAG 58.388 47.826 0.00 0.00 0.00 2.43
4081 4498 2.418746 GCCATGTCTACCACGATGTTCT 60.419 50.000 0.00 0.00 0.00 3.01
4083 4500 1.277842 TGCCATGTCTACCACGATGTT 59.722 47.619 0.00 0.00 0.00 2.71
4084 4501 0.901827 TGCCATGTCTACCACGATGT 59.098 50.000 0.00 0.00 0.00 3.06
4085 4502 1.935873 CTTGCCATGTCTACCACGATG 59.064 52.381 0.00 0.00 0.00 3.84
4089 4549 2.717639 ATCCTTGCCATGTCTACCAC 57.282 50.000 0.00 0.00 0.00 4.16
4093 4553 4.411869 TGTTCCATATCCTTGCCATGTCTA 59.588 41.667 0.00 0.00 0.00 2.59
4100 4560 3.567478 AGTCTGTTCCATATCCTTGCC 57.433 47.619 0.00 0.00 0.00 4.52
4102 4562 7.989741 ACATAGAAAGTCTGTTCCATATCCTTG 59.010 37.037 0.00 0.00 0.00 3.61
4105 4565 8.421784 TGTACATAGAAAGTCTGTTCCATATCC 58.578 37.037 0.00 0.00 0.00 2.59
4106 4566 9.817809 TTGTACATAGAAAGTCTGTTCCATATC 57.182 33.333 0.00 0.00 0.00 1.63
4111 4571 9.522804 CTCTATTGTACATAGAAAGTCTGTTCC 57.477 37.037 0.00 0.00 31.03 3.62
4112 4572 9.026074 GCTCTATTGTACATAGAAAGTCTGTTC 57.974 37.037 0.00 0.00 31.03 3.18
4113 4573 8.754080 AGCTCTATTGTACATAGAAAGTCTGTT 58.246 33.333 0.00 0.00 31.03 3.16
4167 4903 6.265196 ACTTCAAAGATGCAACAACAGGATAA 59.735 34.615 0.00 0.00 0.00 1.75
4197 4937 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4198 4938 2.667473 ACAAGTAATTCCGGACGGAG 57.333 50.000 13.64 3.15 46.06 4.63
4199 4939 2.690786 CAACAAGTAATTCCGGACGGA 58.309 47.619 1.83 9.76 43.52 4.69
4200 4940 1.129811 GCAACAAGTAATTCCGGACGG 59.870 52.381 1.83 3.96 0.00 4.79
4201 4941 1.801771 TGCAACAAGTAATTCCGGACG 59.198 47.619 1.83 0.00 0.00 4.79
4202 4942 5.554822 TTATGCAACAAGTAATTCCGGAC 57.445 39.130 1.83 0.00 0.00 4.79
4203 4943 6.375736 TCATTTATGCAACAAGTAATTCCGGA 59.624 34.615 0.00 0.00 0.00 5.14
4204 4944 6.559810 TCATTTATGCAACAAGTAATTCCGG 58.440 36.000 0.00 0.00 0.00 5.14
4205 4945 8.633075 ATTCATTTATGCAACAAGTAATTCCG 57.367 30.769 0.00 0.00 0.00 4.30
4257 4997 8.784994 GGAGAGAAATGAATGTATCTAGACGTA 58.215 37.037 0.00 0.00 0.00 3.57
4258 4998 7.520776 CGGAGAGAAATGAATGTATCTAGACGT 60.521 40.741 0.00 0.00 0.00 4.34
4259 4999 6.799441 CGGAGAGAAATGAATGTATCTAGACG 59.201 42.308 0.00 0.00 0.00 4.18
4260 5000 7.806014 GTCGGAGAGAAATGAATGTATCTAGAC 59.194 40.741 0.00 0.00 36.95 2.59
4261 5001 7.502561 TGTCGGAGAGAAATGAATGTATCTAGA 59.497 37.037 0.00 0.00 36.95 2.43
4262 5002 7.652727 TGTCGGAGAGAAATGAATGTATCTAG 58.347 38.462 0.00 0.00 36.95 2.43
4263 5003 7.582667 TGTCGGAGAGAAATGAATGTATCTA 57.417 36.000 0.00 0.00 36.95 1.98
4264 5004 6.471233 TGTCGGAGAGAAATGAATGTATCT 57.529 37.500 0.00 0.00 36.95 1.98
4265 5005 6.758886 ACTTGTCGGAGAGAAATGAATGTATC 59.241 38.462 0.00 0.00 39.98 2.24
4266 5006 6.644347 ACTTGTCGGAGAGAAATGAATGTAT 58.356 36.000 0.00 0.00 39.98 2.29
4267 5007 6.037786 ACTTGTCGGAGAGAAATGAATGTA 57.962 37.500 0.00 0.00 39.98 2.29
4268 5008 4.899502 ACTTGTCGGAGAGAAATGAATGT 58.100 39.130 0.00 0.00 39.98 2.71
4269 5009 7.545362 AATACTTGTCGGAGAGAAATGAATG 57.455 36.000 0.00 0.00 39.98 2.67
4270 5010 7.281100 GGAAATACTTGTCGGAGAGAAATGAAT 59.719 37.037 0.00 0.00 39.98 2.57
4271 5011 6.594159 GGAAATACTTGTCGGAGAGAAATGAA 59.406 38.462 0.00 0.00 39.98 2.57
4272 5012 6.106673 GGAAATACTTGTCGGAGAGAAATGA 58.893 40.000 0.00 0.00 39.98 2.57
4273 5013 5.005779 CGGAAATACTTGTCGGAGAGAAATG 59.994 44.000 0.00 0.00 39.98 2.32
4274 5014 5.109903 CGGAAATACTTGTCGGAGAGAAAT 58.890 41.667 0.00 0.00 39.98 2.17
4275 5015 4.491676 CGGAAATACTTGTCGGAGAGAAA 58.508 43.478 0.00 0.00 39.98 2.52
4276 5016 3.119245 CCGGAAATACTTGTCGGAGAGAA 60.119 47.826 0.00 0.00 42.94 2.87
4277 5017 2.426024 CCGGAAATACTTGTCGGAGAGA 59.574 50.000 0.00 0.00 42.94 3.10
4278 5018 2.426024 TCCGGAAATACTTGTCGGAGAG 59.574 50.000 0.00 0.00 43.84 3.20
4279 5019 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
4280 5020 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
4282 5022 2.159014 TCCATCCGGAAATACTTGTCGG 60.159 50.000 9.01 0.00 38.83 4.79
4283 5023 3.123804 CTCCATCCGGAAATACTTGTCG 58.876 50.000 9.01 0.00 42.21 4.35
4284 5024 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
4285 5025 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
4286 5026 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
4287 5027 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
4288 5028 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
4289 5029 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
4290 5030 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
4291 5031 2.489528 TACTCCCTCCATCCGGAAAT 57.510 50.000 9.01 0.00 42.21 2.17
4292 5032 2.489528 ATACTCCCTCCATCCGGAAA 57.510 50.000 9.01 0.00 42.21 3.13
4293 5033 2.438021 CAAATACTCCCTCCATCCGGAA 59.562 50.000 9.01 0.00 42.21 4.30
4294 5034 2.047061 CAAATACTCCCTCCATCCGGA 58.953 52.381 6.61 6.61 39.79 5.14
4295 5035 1.768870 ACAAATACTCCCTCCATCCGG 59.231 52.381 0.00 0.00 0.00 5.14
4296 5036 4.682778 TTACAAATACTCCCTCCATCCG 57.317 45.455 0.00 0.00 0.00 4.18
4297 5037 5.998363 GTCATTACAAATACTCCCTCCATCC 59.002 44.000 0.00 0.00 0.00 3.51
4298 5038 6.483640 GTGTCATTACAAATACTCCCTCCATC 59.516 42.308 0.00 0.00 37.36 3.51
4299 5039 6.158695 AGTGTCATTACAAATACTCCCTCCAT 59.841 38.462 0.00 0.00 37.36 3.41
4300 5040 5.487488 AGTGTCATTACAAATACTCCCTCCA 59.513 40.000 0.00 0.00 37.36 3.86
4301 5041 5.990668 AGTGTCATTACAAATACTCCCTCC 58.009 41.667 0.00 0.00 37.36 4.30
4302 5042 5.749109 CGAGTGTCATTACAAATACTCCCTC 59.251 44.000 0.00 0.00 37.36 4.30
4303 5043 5.395324 CCGAGTGTCATTACAAATACTCCCT 60.395 44.000 0.00 0.00 37.36 4.20
4304 5044 4.809426 CCGAGTGTCATTACAAATACTCCC 59.191 45.833 0.00 0.00 37.36 4.30
4305 5045 5.416947 ACCGAGTGTCATTACAAATACTCC 58.583 41.667 0.00 0.00 37.36 3.85
4306 5046 6.963049 AACCGAGTGTCATTACAAATACTC 57.037 37.500 0.00 0.00 37.36 2.59
4307 5047 7.117812 CAGAAACCGAGTGTCATTACAAATACT 59.882 37.037 0.00 0.00 37.36 2.12
4308 5048 7.234384 CAGAAACCGAGTGTCATTACAAATAC 58.766 38.462 0.00 0.00 37.36 1.89
4309 5049 6.370442 CCAGAAACCGAGTGTCATTACAAATA 59.630 38.462 0.00 0.00 37.36 1.40
4310 5050 5.181245 CCAGAAACCGAGTGTCATTACAAAT 59.819 40.000 0.00 0.00 37.36 2.32
4311 5051 4.513692 CCAGAAACCGAGTGTCATTACAAA 59.486 41.667 0.00 0.00 37.36 2.83
4418 5158 2.441750 TCCCAAACTCTTGTTACCTGCT 59.558 45.455 0.00 0.00 34.96 4.24
4510 5250 4.366586 CATAGACAGATGTTCGCACAGAT 58.633 43.478 0.00 0.00 35.94 2.90
4518 5258 3.386078 TGAGAGGGCATAGACAGATGTTC 59.614 47.826 0.00 0.00 0.00 3.18
4572 5312 7.873505 AGAAGAAATACTATTCGGCTATCCAAC 59.126 37.037 0.00 0.00 34.46 3.77
4632 5372 4.202111 GCCAAACAAAAGCTAACCAGAAGA 60.202 41.667 0.00 0.00 0.00 2.87
4671 5411 7.012704 TCTGTTTCTGGTGATTCTTTCTCAAAG 59.987 37.037 0.00 0.00 39.88 2.77
4698 5438 5.050091 CGATATGAGGGTACTTGCAATGTTC 60.050 44.000 0.00 0.00 0.00 3.18
4893 5633 1.742831 GCAATGGCGATTGTAGGTTGA 59.257 47.619 20.66 0.00 41.09 3.18
4980 5720 2.019156 GCTTTGGGATACACTCCTGCC 61.019 57.143 0.00 0.00 44.28 4.85
5162 5903 1.022982 CAGAAGAGCTCGCAATGGCA 61.023 55.000 8.37 0.00 41.24 4.92
5224 5965 4.741676 AGAAACGTCAAACAAGTACCGTAG 59.258 41.667 0.00 0.00 0.00 3.51
5232 5973 5.061684 GGGAAAAACAGAAACGTCAAACAAG 59.938 40.000 0.00 0.00 0.00 3.16
5242 5983 5.029807 TGATTTGGGGGAAAAACAGAAAC 57.970 39.130 0.00 0.00 0.00 2.78
5254 5995 3.952931 TCAAATGCAATTGATTTGGGGG 58.047 40.909 25.90 12.88 40.01 5.40
5255 5996 5.706369 TCTTTCAAATGCAATTGATTTGGGG 59.294 36.000 25.90 19.89 40.01 4.96
5256 5997 6.804770 TCTTTCAAATGCAATTGATTTGGG 57.195 33.333 25.90 20.09 40.01 4.12
5262 6003 4.317488 GGCCTTCTTTCAAATGCAATTGA 58.683 39.130 13.20 13.20 36.10 2.57
5340 6081 0.666913 CTACGTACGTGGCCTAGCAT 59.333 55.000 30.25 1.85 0.00 3.79
5351 6092 6.858104 TCATTGATGTAAACACTACGTACG 57.142 37.500 15.01 15.01 0.00 3.67
5355 6096 6.831769 AGCTTTCATTGATGTAAACACTACG 58.168 36.000 0.00 0.00 0.00 3.51
5356 6097 8.034058 AGAGCTTTCATTGATGTAAACACTAC 57.966 34.615 0.00 0.00 0.00 2.73
5357 6098 7.877612 TGAGAGCTTTCATTGATGTAAACACTA 59.122 33.333 2.15 0.00 0.00 2.74
5358 6099 6.712095 TGAGAGCTTTCATTGATGTAAACACT 59.288 34.615 2.15 0.00 0.00 3.55
5359 6100 6.902341 TGAGAGCTTTCATTGATGTAAACAC 58.098 36.000 2.15 0.00 0.00 3.32
5360 6101 7.692460 ATGAGAGCTTTCATTGATGTAAACA 57.308 32.000 13.77 0.00 34.17 2.83
5361 6102 7.699812 GGAATGAGAGCTTTCATTGATGTAAAC 59.300 37.037 30.90 16.49 45.30 2.01
5403 6144 9.809096 GATGATGTCAGAGTATTTTGTTCTCTA 57.191 33.333 0.00 0.00 36.88 2.43
5562 6360 4.874977 GGACTGCCGGACTAGCGC 62.875 72.222 5.05 0.00 0.00 5.92
5633 6434 5.560183 CGCTTTTATATTAGTTTGCGGAGGG 60.560 44.000 0.00 0.00 38.74 4.30
5634 6435 5.007332 ACGCTTTTATATTAGTTTGCGGAGG 59.993 40.000 0.00 0.00 45.26 4.30
5635 6436 6.044512 ACGCTTTTATATTAGTTTGCGGAG 57.955 37.500 0.00 0.00 45.26 4.63
5637 6438 8.117988 TCTAAACGCTTTTATATTAGTTTGCGG 58.882 33.333 0.00 0.00 45.26 5.69
5665 6466 4.929808 AGCGTTTAGATCACCACTTTAGTG 59.070 41.667 2.86 2.86 45.23 2.74
5666 6467 5.047235 AGAGCGTTTAGATCACCACTTTAGT 60.047 40.000 0.00 0.00 37.82 2.24
5667 6468 5.411781 AGAGCGTTTAGATCACCACTTTAG 58.588 41.667 0.00 0.00 37.82 1.85
5668 6469 5.401531 AGAGCGTTTAGATCACCACTTTA 57.598 39.130 0.00 0.00 37.82 1.85
5669 6470 4.273148 AGAGCGTTTAGATCACCACTTT 57.727 40.909 0.00 0.00 37.82 2.66
5670 6471 3.963428 AGAGCGTTTAGATCACCACTT 57.037 42.857 0.00 0.00 37.82 3.16
5671 6472 3.963428 AAGAGCGTTTAGATCACCACT 57.037 42.857 0.00 0.00 37.82 4.00
5672 6473 7.948278 AATATAAGAGCGTTTAGATCACCAC 57.052 36.000 0.00 0.00 37.82 4.16
5673 6474 8.857098 ACTAATATAAGAGCGTTTAGATCACCA 58.143 33.333 0.00 0.00 37.82 4.17
5674 6475 9.694137 AACTAATATAAGAGCGTTTAGATCACC 57.306 33.333 0.00 0.00 37.82 4.02
5683 6484 9.953697 CTCTCTGTAAACTAATATAAGAGCGTT 57.046 33.333 0.00 0.00 0.00 4.84
5684 6485 9.339850 TCTCTCTGTAAACTAATATAAGAGCGT 57.660 33.333 0.00 0.00 0.00 5.07
5685 6486 9.820229 CTCTCTCTGTAAACTAATATAAGAGCG 57.180 37.037 0.00 0.00 0.00 5.03
5734 6535 1.653151 GAAGTCGAACTACCCATGCC 58.347 55.000 0.00 0.00 0.00 4.40
5779 6584 5.240623 TCAATAGTTCGACAAAACTTGCCAT 59.759 36.000 0.00 0.00 40.01 4.40
5780 6585 4.576873 TCAATAGTTCGACAAAACTTGCCA 59.423 37.500 0.00 0.00 40.01 4.92
5796 6601 7.657023 AGGAACGAAGGTAGTAATCAATAGT 57.343 36.000 0.00 0.00 0.00 2.12
5809 6614 9.379791 CAAAGACTTATATTTAGGAACGAAGGT 57.620 33.333 0.00 0.00 0.00 3.50
5810 6615 9.379791 ACAAAGACTTATATTTAGGAACGAAGG 57.620 33.333 0.00 0.00 0.00 3.46
5828 6633 9.606631 GTCCATAATGAAATCTCTACAAAGACT 57.393 33.333 0.00 0.00 0.00 3.24
5829 6634 9.383519 TGTCCATAATGAAATCTCTACAAAGAC 57.616 33.333 0.00 0.00 0.00 3.01
5830 6635 9.958180 TTGTCCATAATGAAATCTCTACAAAGA 57.042 29.630 0.00 0.00 0.00 2.52
5831 6636 9.994432 GTTGTCCATAATGAAATCTCTACAAAG 57.006 33.333 0.00 0.00 0.00 2.77
5832 6637 9.513906 TGTTGTCCATAATGAAATCTCTACAAA 57.486 29.630 0.00 0.00 0.00 2.83
5833 6638 9.685276 ATGTTGTCCATAATGAAATCTCTACAA 57.315 29.630 0.00 0.00 29.82 2.41
5836 6641 9.476202 CGTATGTTGTCCATAATGAAATCTCTA 57.524 33.333 0.00 0.00 37.77 2.43
5837 6642 7.442364 CCGTATGTTGTCCATAATGAAATCTCT 59.558 37.037 0.00 0.00 37.77 3.10
5838 6643 7.441157 TCCGTATGTTGTCCATAATGAAATCTC 59.559 37.037 0.00 0.00 37.77 2.75
5839 6644 7.279615 TCCGTATGTTGTCCATAATGAAATCT 58.720 34.615 0.00 0.00 37.77 2.40
5840 6645 7.490962 TCCGTATGTTGTCCATAATGAAATC 57.509 36.000 0.00 0.00 37.77 2.17
5841 6646 7.502226 ACATCCGTATGTTGTCCATAATGAAAT 59.498 33.333 0.00 0.00 44.07 2.17
5842 6647 6.826231 ACATCCGTATGTTGTCCATAATGAAA 59.174 34.615 0.00 0.00 44.07 2.69
5843 6648 6.353323 ACATCCGTATGTTGTCCATAATGAA 58.647 36.000 0.00 0.00 44.07 2.57
5844 6649 5.924356 ACATCCGTATGTTGTCCATAATGA 58.076 37.500 0.00 0.00 44.07 2.57
5845 6650 7.819415 AGATACATCCGTATGTTGTCCATAATG 59.181 37.037 0.00 0.00 44.07 1.90
5846 6651 7.907389 AGATACATCCGTATGTTGTCCATAAT 58.093 34.615 0.00 0.00 44.07 1.28
5847 6652 7.297936 AGATACATCCGTATGTTGTCCATAA 57.702 36.000 0.00 0.00 44.07 1.90
5848 6653 6.911250 AGATACATCCGTATGTTGTCCATA 57.089 37.500 0.00 0.00 44.07 2.74
5849 6654 5.808366 AGATACATCCGTATGTTGTCCAT 57.192 39.130 0.00 0.00 44.07 3.41
5850 6655 6.066032 TCTAGATACATCCGTATGTTGTCCA 58.934 40.000 0.00 0.00 44.07 4.02
5851 6656 6.570672 TCTAGATACATCCGTATGTTGTCC 57.429 41.667 0.00 0.00 44.07 4.02
5852 6657 6.528423 GCATCTAGATACATCCGTATGTTGTC 59.472 42.308 4.54 0.00 44.07 3.18
5853 6658 6.015434 TGCATCTAGATACATCCGTATGTTGT 60.015 38.462 4.54 0.00 44.07 3.32
5854 6659 6.389906 TGCATCTAGATACATCCGTATGTTG 58.610 40.000 4.54 0.00 44.07 3.33
5855 6660 6.590234 TGCATCTAGATACATCCGTATGTT 57.410 37.500 4.54 0.00 44.07 2.71
5857 6662 8.484641 AAAATGCATCTAGATACATCCGTATG 57.515 34.615 17.09 0.00 38.48 2.39
5858 6663 9.809096 CTAAAATGCATCTAGATACATCCGTAT 57.191 33.333 17.09 0.85 41.16 3.06
5859 6664 9.020731 TCTAAAATGCATCTAGATACATCCGTA 57.979 33.333 17.09 9.71 0.00 4.02
5860 6665 7.896811 TCTAAAATGCATCTAGATACATCCGT 58.103 34.615 17.09 9.18 0.00 4.69
5861 6666 8.031864 ACTCTAAAATGCATCTAGATACATCCG 58.968 37.037 17.09 7.74 0.00 4.18
5884 6689 9.173939 CGGAGCAAAATGAATGAATTTATACTC 57.826 33.333 0.00 0.00 0.00 2.59
5885 6690 8.686334 ACGGAGCAAAATGAATGAATTTATACT 58.314 29.630 0.00 0.00 0.00 2.12
5886 6691 8.856490 ACGGAGCAAAATGAATGAATTTATAC 57.144 30.769 0.00 0.00 0.00 1.47
5888 6693 9.467258 CATACGGAGCAAAATGAATGAATTTAT 57.533 29.630 0.00 0.00 0.00 1.40
5889 6694 8.465999 ACATACGGAGCAAAATGAATGAATTTA 58.534 29.630 0.00 0.00 0.00 1.40
5890 6695 7.322664 ACATACGGAGCAAAATGAATGAATTT 58.677 30.769 0.00 0.00 0.00 1.82
5891 6696 6.866480 ACATACGGAGCAAAATGAATGAATT 58.134 32.000 0.00 0.00 0.00 2.17
5892 6697 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
5893 6698 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
5894 6699 5.182950 ACAACATACGGAGCAAAATGAATGA 59.817 36.000 0.00 0.00 0.00 2.57
5895 6700 5.401550 ACAACATACGGAGCAAAATGAATG 58.598 37.500 0.00 0.00 0.00 2.67
5896 6701 5.415701 AGACAACATACGGAGCAAAATGAAT 59.584 36.000 0.00 0.00 0.00 2.57
5897 6702 4.759693 AGACAACATACGGAGCAAAATGAA 59.240 37.500 0.00 0.00 0.00 2.57
5898 6703 4.154015 CAGACAACATACGGAGCAAAATGA 59.846 41.667 0.00 0.00 0.00 2.57
5899 6704 4.406069 CAGACAACATACGGAGCAAAATG 58.594 43.478 0.00 0.00 0.00 2.32
5900 6705 3.440173 CCAGACAACATACGGAGCAAAAT 59.560 43.478 0.00 0.00 0.00 1.82
5901 6706 2.811431 CCAGACAACATACGGAGCAAAA 59.189 45.455 0.00 0.00 0.00 2.44
5902 6707 2.037902 TCCAGACAACATACGGAGCAAA 59.962 45.455 0.00 0.00 0.00 3.68
5903 6708 1.621317 TCCAGACAACATACGGAGCAA 59.379 47.619 0.00 0.00 0.00 3.91
5904 6709 1.262417 TCCAGACAACATACGGAGCA 58.738 50.000 0.00 0.00 0.00 4.26
5905 6710 2.380084 TTCCAGACAACATACGGAGC 57.620 50.000 0.00 0.00 0.00 4.70
5906 6711 4.392921 AGATTCCAGACAACATACGGAG 57.607 45.455 0.00 0.00 0.00 4.63
5907 6712 4.819105 AAGATTCCAGACAACATACGGA 57.181 40.909 0.00 0.00 0.00 4.69
5908 6713 5.411361 TGAAAAGATTCCAGACAACATACGG 59.589 40.000 0.00 0.00 34.49 4.02
5909 6714 6.480524 TGAAAAGATTCCAGACAACATACG 57.519 37.500 0.00 0.00 34.49 3.06
5910 6715 8.567948 TCTTTGAAAAGATTCCAGACAACATAC 58.432 33.333 1.31 0.00 39.95 2.39
5911 6716 8.567948 GTCTTTGAAAAGATTCCAGACAACATA 58.432 33.333 8.64 0.00 45.83 2.29
5912 6717 7.286316 AGTCTTTGAAAAGATTCCAGACAACAT 59.714 33.333 8.64 0.00 45.83 2.71
5913 6718 6.603201 AGTCTTTGAAAAGATTCCAGACAACA 59.397 34.615 8.64 0.00 45.83 3.33
5914 6719 7.032377 AGTCTTTGAAAAGATTCCAGACAAC 57.968 36.000 8.64 0.00 45.83 3.32
5915 6720 7.645058 AAGTCTTTGAAAAGATTCCAGACAA 57.355 32.000 8.64 0.00 45.83 3.18
5916 6721 8.924511 ATAAGTCTTTGAAAAGATTCCAGACA 57.075 30.769 8.64 2.83 45.83 3.41
5928 6733 9.947433 TCCGTTCCTAAATATAAGTCTTTGAAA 57.053 29.630 0.00 0.00 0.00 2.69
5929 6734 9.595823 CTCCGTTCCTAAATATAAGTCTTTGAA 57.404 33.333 0.00 0.00 0.00 2.69
5930 6735 8.202137 CCTCCGTTCCTAAATATAAGTCTTTGA 58.798 37.037 0.00 0.00 0.00 2.69
5931 6736 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
5932 6737 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5933 6738 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5934 6739 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5935 6740 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5936 6741 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5937 6742 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5938 6743 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
5939 6744 8.731591 AAATACTCCCTCCGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
5940 6745 7.628501 AAATACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
5941 6746 7.092757 ACAAAATACTCCCTCCGTTCCTAAATA 60.093 37.037 0.00 0.00 0.00 1.40
5942 6747 5.970501 AAATACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
5943 6748 5.013391 ACAAAATACTCCCTCCGTTCCTAAA 59.987 40.000 0.00 0.00 0.00 1.85
5944 6749 4.533311 ACAAAATACTCCCTCCGTTCCTAA 59.467 41.667 0.00 0.00 0.00 2.69
5945 6750 4.098894 ACAAAATACTCCCTCCGTTCCTA 58.901 43.478 0.00 0.00 0.00 2.94
5946 6751 2.910977 ACAAAATACTCCCTCCGTTCCT 59.089 45.455 0.00 0.00 0.00 3.36
5947 6752 3.345508 ACAAAATACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
5948 6753 5.915175 AGATACAAAATACTCCCTCCGTTC 58.085 41.667 0.00 0.00 0.00 3.95
5949 6754 5.163332 GGAGATACAAAATACTCCCTCCGTT 60.163 44.000 0.00 0.00 41.89 4.44
5950 6755 4.344390 GGAGATACAAAATACTCCCTCCGT 59.656 45.833 0.00 0.00 41.89 4.69
5951 6756 4.589374 AGGAGATACAAAATACTCCCTCCG 59.411 45.833 0.00 0.00 46.88 4.63
5952 6757 6.327887 AGAAGGAGATACAAAATACTCCCTCC 59.672 42.308 0.00 0.00 46.88 4.30
5953 6758 7.368198 AGAAGGAGATACAAAATACTCCCTC 57.632 40.000 0.00 0.00 46.88 4.30
5954 6759 7.757242 AAGAAGGAGATACAAAATACTCCCT 57.243 36.000 0.00 0.00 46.88 4.20
5955 6760 8.809468 AAAAGAAGGAGATACAAAATACTCCC 57.191 34.615 0.00 0.00 46.88 4.30
5992 6797 5.067283 GGCAGTTCTCCTGTTAACTTTCAAA 59.933 40.000 7.22 0.00 43.55 2.69
5993 6798 4.578928 GGCAGTTCTCCTGTTAACTTTCAA 59.421 41.667 7.22 0.00 43.55 2.69
5994 6799 4.134563 GGCAGTTCTCCTGTTAACTTTCA 58.865 43.478 7.22 0.00 43.55 2.69
6003 6808 2.290577 GGAATCTTGGCAGTTCTCCTGT 60.291 50.000 8.55 0.00 43.55 4.00
6041 6846 2.896685 CCCTCAATAAACCAAGCAACCA 59.103 45.455 0.00 0.00 0.00 3.67
6057 6862 0.469070 TTTTCGGACGGTTTCCCTCA 59.531 50.000 0.00 0.00 42.27 3.86
6058 6863 0.870393 GTTTTCGGACGGTTTCCCTC 59.130 55.000 0.00 0.00 42.27 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.