Multiple sequence alignment - TraesCS5B01G131100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G131100 chr5B 100.000 5779 0 0 1 5779 243853141 243847363 0.000000e+00 10672
1 TraesCS5B01G131100 chr5B 90.260 154 13 2 1979 2130 288327656 288327809 3.530000e-47 200
2 TraesCS5B01G131100 chr5D 97.338 3156 58 9 2396 5536 221149284 221146140 0.000000e+00 5339
3 TraesCS5B01G131100 chr5D 95.191 1414 40 7 865 2278 221150650 221149265 0.000000e+00 2209
4 TraesCS5B01G131100 chr5D 85.060 415 18 19 413 819 221151135 221150757 3.270000e-102 383
5 TraesCS5B01G131100 chr5D 92.704 233 14 2 5536 5767 536022336 536022106 3.340000e-87 333
6 TraesCS5B01G131100 chr5D 92.275 233 14 3 5537 5768 504790863 504790634 1.550000e-85 327
7 TraesCS5B01G131100 chr5D 99.174 121 1 0 2275 2395 152758135 152758255 9.750000e-53 219
8 TraesCS5B01G131100 chr5D 91.083 157 12 2 1979 2133 256749951 256749795 1.630000e-50 211
9 TraesCS5B01G131100 chr5A 95.976 3106 86 12 2396 5489 303400096 303403174 0.000000e+00 5007
10 TraesCS5B01G131100 chr5A 95.786 1234 38 4 1046 2275 303398890 303400113 0.000000e+00 1978
11 TraesCS5B01G131100 chr5A 88.591 596 53 9 1 582 303397367 303397961 0.000000e+00 710
12 TraesCS5B01G131100 chr5A 90.190 316 16 8 615 924 303397952 303398258 1.170000e-106 398
13 TraesCS5B01G131100 chr3A 85.185 378 45 10 3 370 375814565 375814941 1.520000e-100 377
14 TraesCS5B01G131100 chr4D 93.534 232 12 2 5537 5767 208562320 208562549 5.540000e-90 342
15 TraesCS5B01G131100 chr7D 93.133 233 13 2 5536 5767 82851133 82851363 7.170000e-89 339
16 TraesCS5B01G131100 chr7D 91.915 235 15 3 5535 5767 114684976 114684744 5.580000e-85 326
17 TraesCS5B01G131100 chr7D 83.544 316 44 6 420 733 49866798 49867107 7.330000e-74 289
18 TraesCS5B01G131100 chr7D 97.581 124 2 1 2272 2395 84437343 84437465 1.630000e-50 211
19 TraesCS5B01G131100 chr7D 80.952 252 39 7 1 246 360354100 360354348 2.130000e-44 191
20 TraesCS5B01G131100 chr7D 80.392 255 43 4 1 249 80290842 80290589 2.750000e-43 187
21 TraesCS5B01G131100 chr7D 87.379 103 12 1 320 421 417794687 417794789 3.660000e-22 117
22 TraesCS5B01G131100 chr4A 93.103 232 12 3 5536 5765 714825914 714826143 2.580000e-88 337
23 TraesCS5B01G131100 chr2B 92.308 234 14 3 5536 5767 110817814 110818045 4.320000e-86 329
24 TraesCS5B01G131100 chr2B 95.420 131 4 2 2266 2395 79014275 79014404 2.110000e-49 207
25 TraesCS5B01G131100 chr2B 89.241 158 15 2 1976 2131 602996297 602996454 4.570000e-46 196
26 TraesCS5B01G131100 chr1B 92.308 234 14 3 5536 5767 662015018 662015249 4.320000e-86 329
27 TraesCS5B01G131100 chr1B 98.361 122 2 0 2275 2396 644913012 644913133 1.260000e-51 215
28 TraesCS5B01G131100 chr1A 91.632 239 15 4 5531 5767 380580365 380580130 5.580000e-85 326
29 TraesCS5B01G131100 chr1A 97.581 124 2 1 2272 2395 548323195 548323317 1.630000e-50 211
30 TraesCS5B01G131100 chr2A 98.361 122 2 0 2274 2395 757574132 757574253 1.260000e-51 215
31 TraesCS5B01G131100 chrUn 96.183 131 3 2 2266 2395 388759350 388759479 4.540000e-51 213
32 TraesCS5B01G131100 chrUn 96.875 128 2 2 2269 2395 390044245 390044119 4.540000e-51 213
33 TraesCS5B01G131100 chrUn 96.875 128 2 2 2269 2395 466843462 466843336 4.540000e-51 213
34 TraesCS5B01G131100 chr7B 91.837 147 11 1 1979 2125 700413929 700413784 2.730000e-48 204
35 TraesCS5B01G131100 chr4B 90.260 154 14 1 1979 2132 78607919 78607767 3.530000e-47 200
36 TraesCS5B01G131100 chr7A 87.222 180 13 10 1971 2144 201986994 201987169 4.570000e-46 196
37 TraesCS5B01G131100 chr2D 89.172 157 16 1 1976 2131 512769189 512769345 1.640000e-45 195
38 TraesCS5B01G131100 chr1D 81.659 229 35 5 1 223 411747074 411747301 3.560000e-42 183
39 TraesCS5B01G131100 chr1D 80.423 189 29 6 1 182 234736923 234736736 2.810000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G131100 chr5B 243847363 243853141 5778 True 10672.000000 10672 100.000000 1 5779 1 chr5B.!!$R1 5778
1 TraesCS5B01G131100 chr5D 221146140 221151135 4995 True 2643.666667 5339 92.529667 413 5536 3 chr5D.!!$R4 5123
2 TraesCS5B01G131100 chr5A 303397367 303403174 5807 False 2023.250000 5007 92.635750 1 5489 4 chr5A.!!$F1 5488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
319 329 0.452987 CCCATGATTTGTGACAGCGG 59.547 55.000 0.00 0.0 0.00 5.52 F
337 347 0.744771 GGGGACTGCGGATTGAAGAC 60.745 60.000 0.00 0.0 0.00 3.01 F
1524 2118 0.112412 ACGGTTGGGAATTCAAGGCT 59.888 50.000 7.93 0.0 0.00 4.58 F
2298 2895 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.0 45.19 2.75 F
2306 2903 0.673985 TGGTCGCGAGATCTTATGGG 59.326 55.000 10.24 0.0 43.23 4.00 F
2307 2904 0.674534 GGTCGCGAGATCTTATGGGT 59.325 55.000 10.24 0.0 45.19 4.51 F
2327 2924 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.0 0.00 4.96 F
2330 2927 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.0 0.00 3.16 F
2331 2928 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.0 0.00 2.66 F
4706 5308 1.226746 GGGCAAATCGGGTATCTTCG 58.773 55.000 0.00 0.0 0.00 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1290 1884 0.105709 CCTTCTCCTCCTCCTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30 R
2287 2884 0.673985 CCCATAAGATCTCGCGACCA 59.326 55.000 3.71 0.00 0.00 4.02 R
3192 3793 2.097142 GCTTTCTCTGCAGCACATAAGG 59.903 50.000 9.47 0.42 35.95 2.69 R
3989 4591 0.179059 ACCATGCGGCGACATAATCA 60.179 50.000 12.98 0.00 34.57 2.57 R
4098 4700 8.649973 ATCGAAATATCTGTACCTTCAGAAAC 57.350 34.615 0.00 0.00 45.65 2.78 R
4456 5058 4.101430 AGACAATGTTGAAAATTGGCCACT 59.899 37.500 10.27 0.00 42.98 4.00 R
4513 5115 2.325484 TGTAGAAGACCAGTTGGCAGA 58.675 47.619 0.00 0.00 39.32 4.26 R
4635 5237 0.661020 CCGTTCCACACAACCACTTC 59.339 55.000 0.00 0.00 0.00 3.01 R
4733 5335 5.064452 GCTTGTACTGTCCATTGAAGAGATG 59.936 44.000 0.00 0.00 0.00 2.90 R
5586 6213 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.552294 GGAATCGTCTTAAAGAAGCGAGG 59.448 47.826 0.00 0.00 41.29 4.63
25 26 1.993370 CGTCTTAAAGAAGCGAGGTGG 59.007 52.381 0.00 0.00 35.53 4.61
62 63 1.026182 TATCCGTGCTTTGCAGCCTG 61.026 55.000 0.00 0.00 46.74 4.85
68 69 1.006922 GCTTTGCAGCCTGTTGGAC 60.007 57.895 0.00 0.00 40.61 4.02
69 70 1.662044 CTTTGCAGCCTGTTGGACC 59.338 57.895 0.00 0.00 34.57 4.46
70 71 2.133742 CTTTGCAGCCTGTTGGACCG 62.134 60.000 0.00 0.00 34.57 4.79
79 80 1.470979 CCTGTTGGACCGGAGATTACG 60.471 57.143 9.46 0.00 34.57 3.18
96 97 7.073342 AGATTACGTTTTTCTTATGTGGCTC 57.927 36.000 0.00 0.00 0.00 4.70
131 133 5.952387 AGGCCTAGCAATGGTTATTTGATA 58.048 37.500 1.29 0.00 0.00 2.15
234 236 3.193479 TCACGAACATGTGATAGCTCAGT 59.807 43.478 0.00 0.00 43.62 3.41
237 239 4.176271 CGAACATGTGATAGCTCAGTTGA 58.824 43.478 0.00 0.00 30.18 3.18
246 248 5.290643 GTGATAGCTCAGTTGATTGACTCAC 59.709 44.000 0.00 0.00 29.45 3.51
267 269 3.512680 CGTAAGTCAACCATGAGAGGTC 58.487 50.000 0.00 0.00 42.25 3.85
276 278 2.119801 CATGAGAGGTCAGGGGTTTG 57.880 55.000 0.00 0.00 35.66 2.93
280 282 2.305927 TGAGAGGTCAGGGGTTTGAATC 59.694 50.000 0.00 0.00 0.00 2.52
310 314 7.006865 TGGCATATATTTTCCCCATGATTTG 57.993 36.000 0.00 0.00 0.00 2.32
311 315 6.558014 TGGCATATATTTTCCCCATGATTTGT 59.442 34.615 0.00 0.00 0.00 2.83
312 316 6.875195 GGCATATATTTTCCCCATGATTTGTG 59.125 38.462 0.00 0.00 0.00 3.33
313 317 7.256261 GGCATATATTTTCCCCATGATTTGTGA 60.256 37.037 0.00 0.00 0.00 3.58
314 318 7.599998 GCATATATTTTCCCCATGATTTGTGAC 59.400 37.037 0.00 0.00 0.00 3.67
315 319 8.640651 CATATATTTTCCCCATGATTTGTGACA 58.359 33.333 0.00 0.00 0.00 3.58
319 329 0.452987 CCCATGATTTGTGACAGCGG 59.547 55.000 0.00 0.00 0.00 5.52
335 345 1.815421 CGGGGACTGCGGATTGAAG 60.815 63.158 0.00 0.00 0.00 3.02
337 347 0.744771 GGGGACTGCGGATTGAAGAC 60.745 60.000 0.00 0.00 0.00 3.01
338 348 0.744771 GGGACTGCGGATTGAAGACC 60.745 60.000 0.00 0.00 37.34 3.85
349 359 5.335661 GCGGATTGAAGACCAAAAAGTACAT 60.336 40.000 0.00 0.00 38.43 2.29
413 428 3.185797 GCGGTCGGTGCTTTATTATTAGG 59.814 47.826 0.00 0.00 0.00 2.69
456 471 5.931146 GCAAATTCATTGTTTACACCATGGA 59.069 36.000 21.47 0.00 41.32 3.41
589 605 6.212888 ACCATGGCAATTATCTGACTTTTC 57.787 37.500 13.04 0.00 0.00 2.29
616 632 4.413495 TTTCCCTTTAATCTTGTTCGCG 57.587 40.909 0.00 0.00 0.00 5.87
637 653 8.289440 TCGCGATTATCTATTTATGAAACGTT 57.711 30.769 3.71 0.00 0.00 3.99
638 654 8.422457 TCGCGATTATCTATTTATGAAACGTTC 58.578 33.333 3.71 0.00 0.00 3.95
674 690 4.492494 TCTGGCTATGTGATGACAACAT 57.508 40.909 0.00 0.00 39.67 2.71
675 691 4.847198 TCTGGCTATGTGATGACAACATT 58.153 39.130 0.00 0.00 36.82 2.71
676 692 5.255687 TCTGGCTATGTGATGACAACATTT 58.744 37.500 0.00 0.00 36.82 2.32
677 693 5.711506 TCTGGCTATGTGATGACAACATTTT 59.288 36.000 0.00 0.00 36.82 1.82
678 694 6.209192 TCTGGCTATGTGATGACAACATTTTT 59.791 34.615 0.00 0.00 36.82 1.94
766 789 7.141758 AGAGGATGCAATTTTATAGAGGTCA 57.858 36.000 0.00 0.00 0.00 4.02
769 792 4.875544 TGCAATTTTATAGAGGTCACGC 57.124 40.909 0.00 0.00 0.00 5.34
956 1040 2.896443 CCAGAAGGGACTCGCCTC 59.104 66.667 0.00 0.00 38.49 4.70
995 1079 2.117423 CACCCCAACCAACCCTCC 59.883 66.667 0.00 0.00 0.00 4.30
998 1082 3.992641 CCCAACCAACCCTCCCCC 61.993 72.222 0.00 0.00 0.00 5.40
999 1083 3.189646 CCAACCAACCCTCCCCCA 61.190 66.667 0.00 0.00 0.00 4.96
1080 1674 2.047179 GACTTCGCTTTCGCCCCT 60.047 61.111 0.00 0.00 35.26 4.79
1289 1883 1.522668 CTGTTTGGAGCCGATGACAA 58.477 50.000 0.00 0.00 0.00 3.18
1290 1884 1.466167 CTGTTTGGAGCCGATGACAAG 59.534 52.381 0.00 0.00 0.00 3.16
1291 1885 0.804989 GTTTGGAGCCGATGACAAGG 59.195 55.000 0.00 0.00 0.00 3.61
1524 2118 0.112412 ACGGTTGGGAATTCAAGGCT 59.888 50.000 7.93 0.00 0.00 4.58
1533 2127 2.843912 AATTCAAGGCTGCCCCCTCG 62.844 60.000 16.57 0.00 32.93 4.63
1696 2290 3.354948 ACTATTGCATCAGCTGGACAA 57.645 42.857 15.13 15.61 42.74 3.18
1713 2307 4.223255 TGGACAACCGACCTGATAAATGTA 59.777 41.667 0.00 0.00 39.42 2.29
1714 2308 4.569564 GGACAACCGACCTGATAAATGTAC 59.430 45.833 0.00 0.00 0.00 2.90
1715 2309 5.416271 ACAACCGACCTGATAAATGTACT 57.584 39.130 0.00 0.00 0.00 2.73
1716 2310 5.416947 ACAACCGACCTGATAAATGTACTC 58.583 41.667 0.00 0.00 0.00 2.59
1717 2311 4.667519 ACCGACCTGATAAATGTACTCC 57.332 45.455 0.00 0.00 0.00 3.85
1718 2312 3.067742 ACCGACCTGATAAATGTACTCCG 59.932 47.826 0.00 0.00 0.00 4.63
1719 2313 3.067742 CCGACCTGATAAATGTACTCCGT 59.932 47.826 0.00 0.00 0.00 4.69
1840 2434 0.322187 AATTCGTTGCTAAGCCCCGT 60.322 50.000 0.00 0.00 0.00 5.28
1908 2502 8.649841 CATGATTGTGGCAATTAAGTAAAACAG 58.350 33.333 0.00 0.00 0.00 3.16
1982 2576 7.651607 TGGGGAATAAGGTGTAACTAGTACTA 58.348 38.462 1.89 1.89 36.74 1.82
1991 2585 7.187676 AGGTGTAACTAGTACTACCTCCATTT 58.812 38.462 15.41 0.00 38.67 2.32
2068 2662 8.921670 GTTTTAGTGTGTTTGTTCACTCATTTT 58.078 29.630 1.08 0.00 42.77 1.82
2187 2781 9.444600 GTTTTAGACCTGGACATTAATTCAGTA 57.555 33.333 0.00 0.00 0.00 2.74
2273 2870 9.839185 TTAATAGGAACATATACCTCTAAGGCT 57.161 33.333 0.00 0.00 39.63 4.58
2274 2871 7.964666 ATAGGAACATATACCTCTAAGGCTC 57.035 40.000 0.00 0.00 39.63 4.70
2275 2872 5.716979 AGGAACATATACCTCTAAGGCTCA 58.283 41.667 0.00 0.00 39.63 4.26
2276 2873 5.777732 AGGAACATATACCTCTAAGGCTCAG 59.222 44.000 0.00 0.00 39.63 3.35
2277 2874 5.775701 GGAACATATACCTCTAAGGCTCAGA 59.224 44.000 0.00 0.00 39.63 3.27
2278 2875 6.071616 GGAACATATACCTCTAAGGCTCAGAG 60.072 46.154 7.78 7.78 39.63 3.35
2279 2876 4.770010 ACATATACCTCTAAGGCTCAGAGC 59.230 45.833 14.69 14.69 39.63 4.09
2289 2886 2.777969 GCTCAGAGCCATGAGTTGG 58.222 57.895 11.84 0.00 46.93 3.77
2296 2893 3.786101 CCATGAGTTGGTCGCGAG 58.214 61.111 10.24 0.00 40.99 5.03
2297 2894 1.215382 CCATGAGTTGGTCGCGAGA 59.785 57.895 10.24 0.00 40.99 4.04
2298 2895 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.00 45.19 2.75
2299 2896 1.203928 CATGAGTTGGTCGCGAGATC 58.796 55.000 10.24 2.63 45.19 2.75
2300 2897 1.107114 ATGAGTTGGTCGCGAGATCT 58.893 50.000 10.24 5.84 43.23 2.75
2301 2898 0.888619 TGAGTTGGTCGCGAGATCTT 59.111 50.000 10.24 0.00 43.23 2.40
2302 2899 2.089201 TGAGTTGGTCGCGAGATCTTA 58.911 47.619 10.24 0.00 43.23 2.10
2303 2900 2.688446 TGAGTTGGTCGCGAGATCTTAT 59.312 45.455 10.24 0.00 43.23 1.73
2304 2901 3.046390 GAGTTGGTCGCGAGATCTTATG 58.954 50.000 10.24 0.00 43.23 1.90
2305 2902 2.128035 GTTGGTCGCGAGATCTTATGG 58.872 52.381 10.24 0.00 43.23 2.74
2306 2903 0.673985 TGGTCGCGAGATCTTATGGG 59.326 55.000 10.24 0.00 43.23 4.00
2307 2904 0.674534 GGTCGCGAGATCTTATGGGT 59.325 55.000 10.24 0.00 45.19 4.51
2308 2905 1.068741 GGTCGCGAGATCTTATGGGTT 59.931 52.381 10.24 0.00 45.19 4.11
2309 2906 2.483188 GGTCGCGAGATCTTATGGGTTT 60.483 50.000 10.24 0.00 45.19 3.27
2310 2907 2.795470 GTCGCGAGATCTTATGGGTTTC 59.205 50.000 10.24 0.00 45.19 2.78
2311 2908 2.429250 TCGCGAGATCTTATGGGTTTCA 59.571 45.455 3.71 0.00 33.31 2.69
2312 2909 2.540101 CGCGAGATCTTATGGGTTTCAC 59.460 50.000 0.00 0.00 0.00 3.18
2313 2910 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2314 2911 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2315 2912 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2316 2913 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2317 2914 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2318 2915 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2319 2916 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2320 2917 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2321 2918 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2322 2919 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2323 2920 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2324 2921 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2325 2922 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2326 2923 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2327 2924 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2328 2925 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2329 2926 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2330 2927 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2331 2928 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2332 2929 2.316982 ACCTCTAGCCTACCCCAACTTA 59.683 50.000 0.00 0.00 0.00 2.24
2333 2930 3.051264 ACCTCTAGCCTACCCCAACTTAT 60.051 47.826 0.00 0.00 0.00 1.73
2334 2931 3.974642 CCTCTAGCCTACCCCAACTTATT 59.025 47.826 0.00 0.00 0.00 1.40
2335 2932 4.412528 CCTCTAGCCTACCCCAACTTATTT 59.587 45.833 0.00 0.00 0.00 1.40
2336 2933 5.367945 TCTAGCCTACCCCAACTTATTTG 57.632 43.478 0.00 0.00 34.63 2.32
2349 2946 6.590234 CAACTTATTTGGGACTAAAGGCTT 57.410 37.500 0.00 0.00 0.00 4.35
2350 2947 6.993079 CAACTTATTTGGGACTAAAGGCTTT 58.007 36.000 17.76 17.76 0.00 3.51
2351 2948 6.590234 ACTTATTTGGGACTAAAGGCTTTG 57.410 37.500 22.32 13.97 0.00 2.77
2352 2949 6.075315 ACTTATTTGGGACTAAAGGCTTTGT 58.925 36.000 22.32 16.86 0.00 2.83
2353 2950 6.553476 ACTTATTTGGGACTAAAGGCTTTGTT 59.447 34.615 22.32 8.73 0.00 2.83
2354 2951 4.664150 TTTGGGACTAAAGGCTTTGTTG 57.336 40.909 22.32 13.85 0.00 3.33
2355 2952 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2356 2953 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2357 2954 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2358 2955 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2359 2956 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2360 2957 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2361 2958 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2362 2959 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2363 2960 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2364 2961 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
2365 2962 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
2366 2963 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
2367 2964 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
2368 2965 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
2369 2966 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
2370 2967 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
2371 2968 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
2372 2969 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2373 2970 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2374 2971 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2375 2972 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2376 2973 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2377 2974 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2378 2975 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2379 2976 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2380 2977 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2381 2978 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2382 2979 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2383 2980 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2384 2981 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2385 2982 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2386 2983 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2387 2984 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2388 2985 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2389 2986 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2390 2987 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2391 2988 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2392 2989 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2393 2990 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2394 2991 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2395 2992 6.040247 TGTTGTTGTTGTTGTTGTTGTTGTA 58.960 32.000 0.00 0.00 0.00 2.41
2396 2993 6.701841 TGTTGTTGTTGTTGTTGTTGTTGTAT 59.298 30.769 0.00 0.00 0.00 2.29
2397 2994 7.865889 TGTTGTTGTTGTTGTTGTTGTTGTATA 59.134 29.630 0.00 0.00 0.00 1.47
2398 2995 8.865001 GTTGTTGTTGTTGTTGTTGTTGTATAT 58.135 29.630 0.00 0.00 0.00 0.86
2400 2997 9.504710 TGTTGTTGTTGTTGTTGTTGTATATAC 57.495 29.630 5.89 5.89 0.00 1.47
2401 2998 8.960075 GTTGTTGTTGTTGTTGTTGTATATACC 58.040 33.333 10.38 0.00 0.00 2.73
2402 2999 8.453238 TGTTGTTGTTGTTGTTGTATATACCT 57.547 30.769 10.38 0.00 0.00 3.08
2403 3000 8.561212 TGTTGTTGTTGTTGTTGTATATACCTC 58.439 33.333 10.38 4.29 0.00 3.85
2435 3032 3.467803 ACGATATCTTTAGCCACCTTGC 58.532 45.455 0.34 0.00 0.00 4.01
2710 3310 6.552859 TCTAAATTTGTCGATGCTGTTCAA 57.447 33.333 0.00 0.00 0.00 2.69
2816 3416 6.849085 TTAAGTTACCAGTGGATACCGTTA 57.151 37.500 18.40 6.18 0.00 3.18
3212 3813 2.097142 GCCTTATGTGCTGCAGAGAAAG 59.903 50.000 20.43 12.09 0.00 2.62
3238 3839 8.981647 GCATTATTTGGCCTAAATATTGAACTG 58.018 33.333 26.13 16.21 41.09 3.16
3448 4049 2.187239 ATCATCCTTGCTCCTCAGGA 57.813 50.000 0.00 0.00 34.66 3.86
3558 4159 5.004922 TCATTCTTTTCGCCTTGTGTTTT 57.995 34.783 0.00 0.00 0.00 2.43
3847 4449 4.713553 TGTTACCATCTGCTTCTTGTTCA 58.286 39.130 0.00 0.00 0.00 3.18
3883 4485 8.748412 TGATCTTTGTTTGGGTTATTAATCCAG 58.252 33.333 8.39 0.00 31.59 3.86
3962 4564 5.088730 AGTGTGTCAACCCTACATACCTTA 58.911 41.667 0.00 0.00 39.11 2.69
4098 4700 5.188327 TGCGAAAGTCCATGATCTAGTAG 57.812 43.478 0.00 0.00 0.00 2.57
4456 5058 9.904198 TCCATCATCAGTATTAATGAACTTGAA 57.096 29.630 0.00 0.00 35.64 2.69
4513 5115 2.806244 GTTGACATGCCGACTAACACTT 59.194 45.455 0.00 0.00 0.00 3.16
4635 5237 2.173356 TCTTCACATAATGCAGGAGGGG 59.827 50.000 0.00 0.00 0.00 4.79
4706 5308 1.226746 GGGCAAATCGGGTATCTTCG 58.773 55.000 0.00 0.00 0.00 3.79
4733 5335 0.784778 CTCGGCTTTCACTCGTTCAC 59.215 55.000 0.00 0.00 0.00 3.18
4790 5392 2.413837 CCTTGTTGAGTAACCTGTCCG 58.586 52.381 0.00 0.00 35.92 4.79
4811 5413 4.258935 GCAAATTCGCGATGTTCTTAGA 57.741 40.909 10.88 0.00 0.00 2.10
4812 5414 4.266945 GCAAATTCGCGATGTTCTTAGAG 58.733 43.478 10.88 0.00 0.00 2.43
4865 5479 8.787852 CAAGCTCTCTTTACCAAAACTTATTCT 58.212 33.333 0.00 0.00 0.00 2.40
5043 5657 4.832590 AGATGACGGGTATCTTTCTACG 57.167 45.455 0.00 0.00 30.98 3.51
5072 5686 8.635765 ACCATGTATATTGTATTTAAGCTGGG 57.364 34.615 0.00 0.00 0.00 4.45
5087 5701 1.228124 TGGGGTACACTGCAACAGC 60.228 57.895 0.00 0.00 34.37 4.40
5309 5923 8.910351 GGTTTCACCTCTTAGAGCATTTATAT 57.090 34.615 3.26 0.00 34.73 0.86
5310 5924 8.778358 GGTTTCACCTCTTAGAGCATTTATATG 58.222 37.037 3.26 0.00 34.73 1.78
5311 5925 9.331282 GTTTCACCTCTTAGAGCATTTATATGT 57.669 33.333 3.26 0.00 34.12 2.29
5312 5926 9.905713 TTTCACCTCTTAGAGCATTTATATGTT 57.094 29.630 3.26 0.00 34.12 2.71
5313 5927 9.905713 TTCACCTCTTAGAGCATTTATATGTTT 57.094 29.630 3.26 0.00 34.12 2.83
5314 5928 9.905713 TCACCTCTTAGAGCATTTATATGTTTT 57.094 29.630 3.26 0.00 34.12 2.43
5315 5929 9.941664 CACCTCTTAGAGCATTTATATGTTTTG 57.058 33.333 3.26 0.00 34.12 2.44
5316 5930 9.905713 ACCTCTTAGAGCATTTATATGTTTTGA 57.094 29.630 3.26 0.00 34.12 2.69
5462 6089 8.840200 TTTCATCAAGTACTCCCTCTATAACT 57.160 34.615 0.00 0.00 0.00 2.24
5533 6160 3.236618 GAACCGGCACACTCGTTGC 62.237 63.158 0.00 0.00 0.00 4.17
5536 6163 2.972505 CGGCACACTCGTTGCCTT 60.973 61.111 11.41 0.00 45.86 4.35
5537 6164 2.542907 CGGCACACTCGTTGCCTTT 61.543 57.895 11.41 0.00 45.86 3.11
5538 6165 1.733526 GGCACACTCGTTGCCTTTT 59.266 52.632 6.10 0.00 44.72 2.27
5539 6166 0.102300 GGCACACTCGTTGCCTTTTT 59.898 50.000 6.10 0.00 44.72 1.94
5561 6188 6.606234 TTTTTAACATCAGTACAGACGCAA 57.394 33.333 0.00 0.00 0.00 4.85
5563 6190 1.714794 ACATCAGTACAGACGCAAGC 58.285 50.000 0.00 0.00 45.62 4.01
5564 6191 0.642291 CATCAGTACAGACGCAAGCG 59.358 55.000 13.50 13.50 46.03 4.68
5565 6192 1.078759 ATCAGTACAGACGCAAGCGC 61.079 55.000 15.09 0.00 44.19 5.92
5566 6193 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
5567 6194 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
5568 6195 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
5569 6196 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
5570 6197 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
5571 6198 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
5572 6199 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
5573 6200 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
5574 6201 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
5575 6202 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
5576 6203 0.159554 CGCAAGCGCTCATATACACG 59.840 55.000 12.06 2.00 35.30 4.49
5580 6207 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
5581 6208 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
5582 6209 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
5583 6210 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
5584 6211 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
5585 6212 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
5586 6213 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
5587 6214 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
5588 6215 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
5589 6216 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
5590 6217 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
5591 6218 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
5592 6219 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
5593 6220 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
5594 6221 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
5595 6222 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
5596 6223 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
5597 6224 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
5598 6225 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
5599 6226 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
5600 6227 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
5601 6228 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
5602 6229 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
5603 6230 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
5604 6231 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
5605 6232 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
5606 6233 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
5607 6234 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
5608 6235 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
5615 6242 4.314096 ACGCACACACGTACACTC 57.686 55.556 0.00 0.00 46.19 3.51
5616 6243 1.731700 ACGCACACACGTACACTCT 59.268 52.632 0.00 0.00 46.19 3.24
5617 6244 0.946528 ACGCACACACGTACACTCTA 59.053 50.000 0.00 0.00 46.19 2.43
5618 6245 1.324718 CGCACACACGTACACTCTAC 58.675 55.000 0.00 0.00 0.00 2.59
5619 6246 1.694639 GCACACACGTACACTCTACC 58.305 55.000 0.00 0.00 0.00 3.18
5620 6247 1.668047 GCACACACGTACACTCTACCC 60.668 57.143 0.00 0.00 0.00 3.69
5621 6248 1.884579 CACACACGTACACTCTACCCT 59.115 52.381 0.00 0.00 0.00 4.34
5622 6249 3.076621 CACACACGTACACTCTACCCTA 58.923 50.000 0.00 0.00 0.00 3.53
5623 6250 3.693085 CACACACGTACACTCTACCCTAT 59.307 47.826 0.00 0.00 0.00 2.57
5624 6251 3.693085 ACACACGTACACTCTACCCTATG 59.307 47.826 0.00 0.00 0.00 2.23
5625 6252 3.943381 CACACGTACACTCTACCCTATGA 59.057 47.826 0.00 0.00 0.00 2.15
5626 6253 4.035324 CACACGTACACTCTACCCTATGAG 59.965 50.000 0.00 0.00 36.47 2.90
5627 6254 3.003482 CACGTACACTCTACCCTATGAGC 59.997 52.174 0.00 0.00 33.92 4.26
5628 6255 3.211865 CGTACACTCTACCCTATGAGCA 58.788 50.000 0.00 0.00 33.92 4.26
5629 6256 3.821600 CGTACACTCTACCCTATGAGCAT 59.178 47.826 0.00 0.00 33.92 3.79
5630 6257 4.083217 CGTACACTCTACCCTATGAGCATC 60.083 50.000 0.00 0.00 33.92 3.91
5631 6258 4.191804 ACACTCTACCCTATGAGCATCT 57.808 45.455 0.00 0.00 34.92 2.90
5632 6259 4.148838 ACACTCTACCCTATGAGCATCTC 58.851 47.826 0.00 0.00 34.92 2.75
5633 6260 3.509575 CACTCTACCCTATGAGCATCTCC 59.490 52.174 0.00 0.00 34.92 3.71
5634 6261 2.752354 CTCTACCCTATGAGCATCTCCG 59.248 54.545 0.00 0.00 34.92 4.63
5635 6262 2.375509 TCTACCCTATGAGCATCTCCGA 59.624 50.000 0.00 0.00 34.92 4.55
5636 6263 2.088104 ACCCTATGAGCATCTCCGAA 57.912 50.000 0.00 0.00 34.92 4.30
5637 6264 2.398588 ACCCTATGAGCATCTCCGAAA 58.601 47.619 0.00 0.00 34.92 3.46
5638 6265 2.366916 ACCCTATGAGCATCTCCGAAAG 59.633 50.000 0.00 0.00 34.92 2.62
5639 6266 2.630098 CCCTATGAGCATCTCCGAAAGA 59.370 50.000 0.00 0.00 38.72 2.52
5640 6267 3.553922 CCCTATGAGCATCTCCGAAAGAC 60.554 52.174 0.00 0.00 36.65 3.01
5641 6268 3.320541 CCTATGAGCATCTCCGAAAGACT 59.679 47.826 0.00 0.00 36.65 3.24
5642 6269 2.662006 TGAGCATCTCCGAAAGACTG 57.338 50.000 0.00 0.00 36.65 3.51
5643 6270 2.171003 TGAGCATCTCCGAAAGACTGA 58.829 47.619 0.00 0.00 36.65 3.41
5644 6271 2.165234 TGAGCATCTCCGAAAGACTGAG 59.835 50.000 0.00 0.00 36.65 3.35
5645 6272 1.134848 AGCATCTCCGAAAGACTGAGC 60.135 52.381 0.00 0.00 36.65 4.26
5646 6273 1.933247 CATCTCCGAAAGACTGAGCC 58.067 55.000 0.00 0.00 36.65 4.70
5647 6274 0.457851 ATCTCCGAAAGACTGAGCCG 59.542 55.000 0.00 0.00 36.65 5.52
5648 6275 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
5649 6276 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
5650 6277 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
5651 6278 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
5652 6279 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
5653 6280 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
5654 6281 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
5655 6282 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
5656 6283 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
5657 6284 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
5658 6285 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
5659 6286 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
5660 6287 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
5661 6288 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
5662 6289 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
5663 6290 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
5664 6291 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
5665 6292 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
5666 6293 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
5667 6294 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
5668 6295 5.587844 GCCGGCATATCATCTTGAGATTTAT 59.412 40.000 24.80 0.00 31.21 1.40
5669 6296 6.457934 GCCGGCATATCATCTTGAGATTTATG 60.458 42.308 24.80 12.28 34.43 1.90
5670 6297 6.820152 CCGGCATATCATCTTGAGATTTATGA 59.180 38.462 17.06 5.24 33.82 2.15
5671 6298 7.335171 CCGGCATATCATCTTGAGATTTATGAA 59.665 37.037 17.06 0.00 33.82 2.57
5672 6299 8.388853 CGGCATATCATCTTGAGATTTATGAAG 58.611 37.037 17.06 10.18 33.82 3.02
5673 6300 9.228949 GGCATATCATCTTGAGATTTATGAAGT 57.771 33.333 17.06 0.00 33.82 3.01
5677 6304 8.674263 ATCATCTTGAGATTTATGAAGTCACC 57.326 34.615 0.00 0.00 32.47 4.02
5678 6305 6.758416 TCATCTTGAGATTTATGAAGTCACCG 59.242 38.462 0.00 0.00 31.21 4.94
5679 6306 6.037786 TCTTGAGATTTATGAAGTCACCGT 57.962 37.500 0.00 0.00 0.00 4.83
5680 6307 7.165460 TCTTGAGATTTATGAAGTCACCGTA 57.835 36.000 0.00 0.00 0.00 4.02
5681 6308 7.258441 TCTTGAGATTTATGAAGTCACCGTAG 58.742 38.462 0.00 0.00 0.00 3.51
5682 6309 6.769134 TGAGATTTATGAAGTCACCGTAGA 57.231 37.500 0.00 0.00 0.00 2.59
5683 6310 6.561614 TGAGATTTATGAAGTCACCGTAGAC 58.438 40.000 0.00 0.00 38.81 2.59
5684 6311 5.579718 AGATTTATGAAGTCACCGTAGACG 58.420 41.667 0.00 0.00 43.24 4.18
5685 6312 2.838386 TATGAAGTCACCGTAGACGC 57.162 50.000 0.00 0.00 43.24 5.19
5686 6313 0.172803 ATGAAGTCACCGTAGACGCC 59.827 55.000 0.00 0.00 43.24 5.68
5687 6314 0.892358 TGAAGTCACCGTAGACGCCT 60.892 55.000 0.00 0.00 43.24 5.52
5688 6315 0.179169 GAAGTCACCGTAGACGCCTC 60.179 60.000 0.00 0.00 43.24 4.70
5689 6316 1.919956 AAGTCACCGTAGACGCCTCG 61.920 60.000 0.00 0.00 43.24 4.63
5690 6317 2.359107 TCACCGTAGACGCCTCGT 60.359 61.111 0.00 0.00 45.10 4.18
5714 6341 3.459063 CGGGTTCCCGTCTCCTCC 61.459 72.222 20.65 0.00 43.86 4.30
5715 6342 3.082055 GGGTTCCCGTCTCCTCCC 61.082 72.222 0.00 0.00 0.00 4.30
5716 6343 2.284405 GGTTCCCGTCTCCTCCCA 60.284 66.667 0.00 0.00 0.00 4.37
5717 6344 2.657066 GGTTCCCGTCTCCTCCCAC 61.657 68.421 0.00 0.00 0.00 4.61
5718 6345 1.609794 GTTCCCGTCTCCTCCCACT 60.610 63.158 0.00 0.00 0.00 4.00
5719 6346 1.609501 TTCCCGTCTCCTCCCACTG 60.610 63.158 0.00 0.00 0.00 3.66
5720 6347 2.037367 CCCGTCTCCTCCCACTGA 59.963 66.667 0.00 0.00 0.00 3.41
5721 6348 2.055042 CCCGTCTCCTCCCACTGAG 61.055 68.421 0.00 0.00 41.07 3.35
5722 6349 1.304547 CCGTCTCCTCCCACTGAGT 60.305 63.158 0.00 0.00 39.65 3.41
5723 6350 1.599606 CCGTCTCCTCCCACTGAGTG 61.600 65.000 5.42 5.42 39.65 3.51
5724 6351 0.896019 CGTCTCCTCCCACTGAGTGT 60.896 60.000 12.15 0.00 39.65 3.55
5725 6352 0.605589 GTCTCCTCCCACTGAGTGTG 59.394 60.000 12.15 0.00 45.80 3.82
5726 6353 1.188219 TCTCCTCCCACTGAGTGTGC 61.188 60.000 12.15 0.00 44.92 4.57
5727 6354 1.459348 TCCTCCCACTGAGTGTGCA 60.459 57.895 12.15 0.00 44.92 4.57
5728 6355 0.837691 TCCTCCCACTGAGTGTGCAT 60.838 55.000 12.15 0.00 44.92 3.96
5729 6356 0.392193 CCTCCCACTGAGTGTGCATC 60.392 60.000 12.15 0.00 44.92 3.91
5730 6357 0.738762 CTCCCACTGAGTGTGCATCG 60.739 60.000 12.15 0.00 44.92 3.84
5731 6358 2.393768 CCCACTGAGTGTGCATCGC 61.394 63.158 12.15 0.00 44.92 4.58
5732 6359 2.393768 CCACTGAGTGTGCATCGCC 61.394 63.158 12.15 0.00 44.92 5.54
5733 6360 2.433145 ACTGAGTGTGCATCGCCG 60.433 61.111 0.00 0.00 0.00 6.46
5734 6361 3.190849 CTGAGTGTGCATCGCCGG 61.191 66.667 0.00 0.00 0.00 6.13
5735 6362 3.647649 CTGAGTGTGCATCGCCGGA 62.648 63.158 5.05 0.00 0.00 5.14
5736 6363 2.434185 GAGTGTGCATCGCCGGAA 60.434 61.111 5.05 0.00 0.00 4.30
5737 6364 2.031919 AGTGTGCATCGCCGGAAA 59.968 55.556 5.05 0.00 0.00 3.13
5738 6365 1.369091 GAGTGTGCATCGCCGGAAAT 61.369 55.000 5.05 0.00 0.00 2.17
5739 6366 1.062525 GTGTGCATCGCCGGAAATC 59.937 57.895 5.05 0.00 0.00 2.17
5740 6367 2.112198 TGTGCATCGCCGGAAATCC 61.112 57.895 5.05 0.00 0.00 3.01
5741 6368 1.819632 GTGCATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 0.00 3.24
5742 6369 1.819208 TGCATCGCCGGAAATCCTG 60.819 57.895 5.05 0.00 0.00 3.86
5743 6370 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
5744 6371 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
5745 6372 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
5746 6373 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
5747 6374 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
5748 6375 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
5749 6376 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
5750 6377 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
5751 6378 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
5752 6379 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
5753 6380 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
5754 6381 5.163457 GCCGGAAATCCTGAAATAAATCCAA 60.163 40.000 5.05 0.00 0.00 3.53
5755 6382 6.629291 GCCGGAAATCCTGAAATAAATCCAAA 60.629 38.462 5.05 0.00 0.00 3.28
5756 6383 7.327214 CCGGAAATCCTGAAATAAATCCAAAA 58.673 34.615 0.00 0.00 0.00 2.44
5757 6384 7.821846 CCGGAAATCCTGAAATAAATCCAAAAA 59.178 33.333 0.00 0.00 0.00 1.94
5758 6385 9.382275 CGGAAATCCTGAAATAAATCCAAAAAT 57.618 29.630 0.00 0.00 0.00 1.82
5765 6392 9.919348 CCTGAAATAAATCCAAAAATAAATGCG 57.081 29.630 0.00 0.00 0.00 4.73
5772 6399 6.869421 ATCCAAAAATAAATGCGAAACTCG 57.131 33.333 0.00 0.00 43.89 4.18
5773 6400 5.764131 TCCAAAAATAAATGCGAAACTCGT 58.236 33.333 0.00 0.00 42.81 4.18
5774 6401 6.210078 TCCAAAAATAAATGCGAAACTCGTT 58.790 32.000 0.00 0.00 42.81 3.85
5775 6402 6.143118 TCCAAAAATAAATGCGAAACTCGTTG 59.857 34.615 0.00 0.00 42.81 4.10
5776 6403 6.288419 CAAAAATAAATGCGAAACTCGTTGG 58.712 36.000 0.00 0.00 42.81 3.77
5777 6404 2.604969 TAAATGCGAAACTCGTTGGC 57.395 45.000 0.00 0.00 42.81 4.52
5778 6405 0.951558 AAATGCGAAACTCGTTGGCT 59.048 45.000 0.00 0.00 42.81 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.450976 TCATGTGAAATAATCCCACCTCG 58.549 43.478 0.00 0.00 0.00 4.63
44 45 2.034687 AGGCTGCAAAGCACGGAT 59.965 55.556 0.50 0.00 33.79 4.18
47 48 1.659335 CAACAGGCTGCAAAGCACG 60.659 57.895 15.89 0.00 33.79 5.34
48 49 1.300388 CCAACAGGCTGCAAAGCAC 60.300 57.895 15.89 0.00 33.79 4.40
62 63 2.375173 AACGTAATCTCCGGTCCAAC 57.625 50.000 0.00 0.00 0.00 3.77
68 69 6.456449 CCACATAAGAAAAACGTAATCTCCGG 60.456 42.308 0.00 0.00 0.00 5.14
69 70 6.475207 CCACATAAGAAAAACGTAATCTCCG 58.525 40.000 0.00 0.00 0.00 4.63
70 71 6.093633 AGCCACATAAGAAAAACGTAATCTCC 59.906 38.462 0.00 0.00 0.00 3.71
79 80 2.163613 CCCCGAGCCACATAAGAAAAAC 59.836 50.000 0.00 0.00 0.00 2.43
131 133 3.366052 AATCGTTGGGCCTATTTGACT 57.634 42.857 4.53 0.00 0.00 3.41
163 165 1.266178 AAAGGTTACTTGCATGGCCC 58.734 50.000 0.00 1.03 36.93 5.80
213 215 3.515630 ACTGAGCTATCACATGTTCGTG 58.484 45.455 0.00 0.00 38.29 4.35
215 217 4.176271 TCAACTGAGCTATCACATGTTCG 58.824 43.478 0.00 0.00 0.00 3.95
227 229 2.036475 ACGTGAGTCAATCAACTGAGCT 59.964 45.455 0.00 0.00 44.19 4.09
228 230 2.408050 ACGTGAGTCAATCAACTGAGC 58.592 47.619 0.00 0.00 44.19 4.26
246 248 3.056821 TGACCTCTCATGGTTGACTTACG 60.057 47.826 0.00 0.00 41.00 3.18
255 257 0.178861 AACCCCTGACCTCTCATGGT 60.179 55.000 0.00 0.00 44.10 3.55
260 262 2.573915 AGATTCAAACCCCTGACCTCTC 59.426 50.000 0.00 0.00 0.00 3.20
267 269 2.228822 CCAAACGAGATTCAAACCCCTG 59.771 50.000 0.00 0.00 0.00 4.45
276 278 7.084486 GGGAAAATATATGCCAAACGAGATTC 58.916 38.462 0.00 0.00 0.00 2.52
280 282 4.582656 TGGGGAAAATATATGCCAAACGAG 59.417 41.667 0.00 0.00 0.00 4.18
314 318 4.473520 AATCCGCAGTCCCCGCTG 62.474 66.667 0.00 0.00 39.37 5.18
315 319 4.473520 CAATCCGCAGTCCCCGCT 62.474 66.667 0.00 0.00 0.00 5.52
319 329 0.744771 GGTCTTCAATCCGCAGTCCC 60.745 60.000 0.00 0.00 0.00 4.46
377 392 3.195698 CCGCTTCTGCCGGCTAAC 61.196 66.667 29.70 11.56 35.36 2.34
391 406 3.185797 CCTAATAATAAAGCACCGACCGC 59.814 47.826 0.00 0.00 0.00 5.68
408 423 8.058847 TGCCATAGTCCAAAATCTTTACCTAAT 58.941 33.333 0.00 0.00 0.00 1.73
413 428 9.087424 GAATTTGCCATAGTCCAAAATCTTTAC 57.913 33.333 0.00 0.00 34.93 2.01
589 605 6.586082 CGAACAAGATTAAAGGGAAAATGTGG 59.414 38.462 0.00 0.00 0.00 4.17
637 653 4.488770 AGCCAGATTTAACCCCAAAAAGA 58.511 39.130 0.00 0.00 0.00 2.52
638 654 4.890158 AGCCAGATTTAACCCCAAAAAG 57.110 40.909 0.00 0.00 0.00 2.27
644 660 4.164843 TCACATAGCCAGATTTAACCCC 57.835 45.455 0.00 0.00 0.00 4.95
766 789 4.489771 GCTATGGTGGGGCAGCGT 62.490 66.667 0.00 0.00 34.27 5.07
769 792 1.819632 GTTCGCTATGGTGGGGCAG 60.820 63.158 0.00 0.00 0.00 4.85
956 1040 3.820843 CCGGGAATGGGAAGGGGG 61.821 72.222 0.00 0.00 0.00 5.40
979 1063 3.190391 GGGAGGGTTGGTTGGGGT 61.190 66.667 0.00 0.00 0.00 4.95
982 1066 2.105640 ATTGGGGGAGGGTTGGTTGG 62.106 60.000 0.00 0.00 0.00 3.77
1035 1119 0.110509 CGAAGTCGTCGTCGAGGAAA 60.111 55.000 18.39 0.00 46.96 3.13
1289 1883 0.933700 CTTCTCCTCCTCCTCCTCCT 59.066 60.000 0.00 0.00 0.00 3.69
1290 1884 0.105709 CCTTCTCCTCCTCCTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
1291 1885 0.930726 TCCTTCTCCTCCTCCTCCTC 59.069 60.000 0.00 0.00 0.00 3.71
1524 2118 3.785859 GCATCAGACGAGGGGGCA 61.786 66.667 0.00 0.00 0.00 5.36
1533 2127 3.112205 ATCCTGGCCGGCATCAGAC 62.112 63.158 30.85 10.31 33.11 3.51
1659 2253 6.816140 TGCAATAGTTTCAGATCACGTTGATA 59.184 34.615 0.00 0.00 37.20 2.15
1696 2290 3.067742 CGGAGTACATTTATCAGGTCGGT 59.932 47.826 0.00 0.00 0.00 4.69
1714 2308 5.962433 TCACTCTCTTTACCAAATACGGAG 58.038 41.667 0.00 0.00 0.00 4.63
1715 2309 5.623824 GCTCACTCTCTTTACCAAATACGGA 60.624 44.000 0.00 0.00 0.00 4.69
1716 2310 4.567159 GCTCACTCTCTTTACCAAATACGG 59.433 45.833 0.00 0.00 0.00 4.02
1717 2311 5.411781 AGCTCACTCTCTTTACCAAATACG 58.588 41.667 0.00 0.00 0.00 3.06
1718 2312 6.477360 GCTAGCTCACTCTCTTTACCAAATAC 59.523 42.308 7.70 0.00 0.00 1.89
1719 2313 6.381420 AGCTAGCTCACTCTCTTTACCAAATA 59.619 38.462 12.68 0.00 0.00 1.40
1840 2434 2.494870 GCTCTTAGGTTACAGTTCCGGA 59.505 50.000 0.00 0.00 0.00 5.14
1908 2502 5.678955 ATTACCCCTTGAAGTAGTCTGAC 57.321 43.478 0.00 0.00 0.00 3.51
1982 2576 7.781324 ACATCTTACAATTTGAAATGGAGGT 57.219 32.000 2.79 0.00 0.00 3.85
2253 2850 5.775701 TCTGAGCCTTAGAGGTATATGTTCC 59.224 44.000 0.00 0.00 37.80 3.62
2271 2868 2.777969 CCAACTCATGGCTCTGAGC 58.222 57.895 21.17 21.17 45.37 4.26
2280 2877 1.202348 AGATCTCGCGACCAACTCATG 60.202 52.381 3.71 0.00 0.00 3.07
2281 2878 1.107114 AGATCTCGCGACCAACTCAT 58.893 50.000 3.71 0.00 0.00 2.90
2282 2879 0.888619 AAGATCTCGCGACCAACTCA 59.111 50.000 3.71 0.00 0.00 3.41
2283 2880 2.846039 TAAGATCTCGCGACCAACTC 57.154 50.000 3.71 0.00 0.00 3.01
2284 2881 2.223829 CCATAAGATCTCGCGACCAACT 60.224 50.000 3.71 0.00 0.00 3.16
2285 2882 2.128035 CCATAAGATCTCGCGACCAAC 58.872 52.381 3.71 0.00 0.00 3.77
2286 2883 1.068588 CCCATAAGATCTCGCGACCAA 59.931 52.381 3.71 0.00 0.00 3.67
2287 2884 0.673985 CCCATAAGATCTCGCGACCA 59.326 55.000 3.71 0.00 0.00 4.02
2288 2885 0.674534 ACCCATAAGATCTCGCGACC 59.325 55.000 3.71 0.00 0.00 4.79
2289 2886 2.510768 AACCCATAAGATCTCGCGAC 57.489 50.000 3.71 0.00 0.00 5.19
2290 2887 2.429250 TGAAACCCATAAGATCTCGCGA 59.571 45.455 9.26 9.26 0.00 5.87
2291 2888 2.540101 GTGAAACCCATAAGATCTCGCG 59.460 50.000 0.00 0.00 0.00 5.87
2306 2903 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2307 2904 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2308 2905 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2309 2906 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2310 2907 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2311 2908 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2312 2909 1.880941 AAGTTGGGGTAGGCTAGAGG 58.119 55.000 0.00 0.00 0.00 3.69
2313 2910 5.368989 CAAATAAGTTGGGGTAGGCTAGAG 58.631 45.833 0.00 0.00 33.18 2.43
2314 2911 5.367945 CAAATAAGTTGGGGTAGGCTAGA 57.632 43.478 0.00 0.00 33.18 2.43
2326 2923 6.590234 AAGCCTTTAGTCCCAAATAAGTTG 57.410 37.500 0.00 0.00 36.94 3.16
2327 2924 6.553476 ACAAAGCCTTTAGTCCCAAATAAGTT 59.447 34.615 0.00 0.00 0.00 2.66
2328 2925 6.075315 ACAAAGCCTTTAGTCCCAAATAAGT 58.925 36.000 0.00 0.00 0.00 2.24
2329 2926 6.590234 ACAAAGCCTTTAGTCCCAAATAAG 57.410 37.500 0.00 0.00 0.00 1.73
2330 2927 6.325286 ACAACAAAGCCTTTAGTCCCAAATAA 59.675 34.615 0.00 0.00 0.00 1.40
2331 2928 5.836358 ACAACAAAGCCTTTAGTCCCAAATA 59.164 36.000 0.00 0.00 0.00 1.40
2332 2929 4.653801 ACAACAAAGCCTTTAGTCCCAAAT 59.346 37.500 0.00 0.00 0.00 2.32
2333 2930 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2334 2931 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2335 2932 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2336 2933 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2337 2934 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2338 2935 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2339 2936 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2340 2937 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2341 2938 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2342 2939 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2343 2940 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2344 2941 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2345 2942 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
2346 2943 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
2347 2944 6.042144 ACAACAACAACAACAACAACAAAG 57.958 33.333 0.00 0.00 0.00 2.77
2348 2945 6.128282 ACAACAACAACAACAACAACAACAAA 60.128 30.769 0.00 0.00 0.00 2.83
2349 2946 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2350 2947 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2351 2948 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2352 2949 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2353 2950 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2354 2951 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2355 2952 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2356 2953 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2357 2954 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2358 2955 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2359 2956 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2360 2957 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2361 2958 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2362 2959 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2363 2960 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2364 2961 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2365 2962 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2366 2963 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2367 2964 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2368 2965 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2369 2966 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2370 2967 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2371 2968 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2372 2969 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2373 2970 8.988064 ATATACAACAACAACAACAACAACAA 57.012 26.923 0.00 0.00 0.00 2.83
2374 2971 9.504710 GTATATACAACAACAACAACAACAACA 57.495 29.630 8.05 0.00 0.00 3.33
2375 2972 8.960075 GGTATATACAACAACAACAACAACAAC 58.040 33.333 14.70 0.00 0.00 3.32
2376 2973 8.904834 AGGTATATACAACAACAACAACAACAA 58.095 29.630 14.70 0.00 0.00 2.83
2377 2974 8.453238 AGGTATATACAACAACAACAACAACA 57.547 30.769 14.70 0.00 0.00 3.33
2378 2975 8.780249 AGAGGTATATACAACAACAACAACAAC 58.220 33.333 14.70 0.00 0.00 3.32
2379 2976 8.911918 AGAGGTATATACAACAACAACAACAA 57.088 30.769 14.70 0.00 0.00 2.83
2380 2977 9.999660 TTAGAGGTATATACAACAACAACAACA 57.000 29.630 14.70 0.00 0.00 3.33
2382 2979 9.661563 CCTTAGAGGTATATACAACAACAACAA 57.338 33.333 14.70 0.00 0.00 2.83
2383 2980 7.767198 GCCTTAGAGGTATATACAACAACAACA 59.233 37.037 14.70 0.00 37.80 3.33
2384 2981 7.985752 AGCCTTAGAGGTATATACAACAACAAC 59.014 37.037 14.70 0.00 37.80 3.32
2385 2982 8.086143 AGCCTTAGAGGTATATACAACAACAA 57.914 34.615 14.70 0.71 37.80 2.83
2386 2983 7.563924 AGAGCCTTAGAGGTATATACAACAACA 59.436 37.037 14.70 0.00 37.80 3.33
2387 2984 7.868415 CAGAGCCTTAGAGGTATATACAACAAC 59.132 40.741 14.70 0.00 37.80 3.32
2388 2985 7.783119 TCAGAGCCTTAGAGGTATATACAACAA 59.217 37.037 14.70 2.57 37.80 2.83
2389 2986 7.230913 GTCAGAGCCTTAGAGGTATATACAACA 59.769 40.741 14.70 0.00 37.80 3.33
2390 2987 7.573469 CGTCAGAGCCTTAGAGGTATATACAAC 60.573 44.444 14.70 7.64 37.80 3.32
2391 2988 6.430308 CGTCAGAGCCTTAGAGGTATATACAA 59.570 42.308 14.70 0.00 37.80 2.41
2392 2989 5.938710 CGTCAGAGCCTTAGAGGTATATACA 59.061 44.000 14.70 0.00 37.80 2.29
2393 2990 6.171921 TCGTCAGAGCCTTAGAGGTATATAC 58.828 44.000 4.14 4.14 37.80 1.47
2394 2991 6.370186 TCGTCAGAGCCTTAGAGGTATATA 57.630 41.667 0.00 0.00 37.80 0.86
2395 2992 5.244189 TCGTCAGAGCCTTAGAGGTATAT 57.756 43.478 0.00 0.00 37.80 0.86
2396 2993 4.701651 TCGTCAGAGCCTTAGAGGTATA 57.298 45.455 0.00 0.00 37.80 1.47
2397 2994 3.579534 TCGTCAGAGCCTTAGAGGTAT 57.420 47.619 0.00 0.00 37.80 2.73
2398 2995 3.579534 ATCGTCAGAGCCTTAGAGGTA 57.420 47.619 0.00 0.00 37.80 3.08
2399 2996 2.445682 ATCGTCAGAGCCTTAGAGGT 57.554 50.000 0.00 0.00 37.80 3.85
2400 2997 4.331968 AGATATCGTCAGAGCCTTAGAGG 58.668 47.826 0.00 0.00 38.80 3.69
2401 2998 5.957842 AAGATATCGTCAGAGCCTTAGAG 57.042 43.478 0.00 0.00 0.00 2.43
2402 2999 6.072397 GCTAAAGATATCGTCAGAGCCTTAGA 60.072 42.308 0.00 0.00 0.00 2.10
2403 3000 6.090129 GCTAAAGATATCGTCAGAGCCTTAG 58.910 44.000 0.00 0.00 0.00 2.18
3192 3793 2.097142 GCTTTCTCTGCAGCACATAAGG 59.903 50.000 9.47 0.42 35.95 2.69
3212 3813 8.981647 CAGTTCAATATTTAGGCCAAATAATGC 58.018 33.333 20.03 12.85 41.34 3.56
3238 3839 6.700352 TCCTGGAAATTGTGAAAAATGGATC 58.300 36.000 0.00 0.00 0.00 3.36
3790 4392 6.656945 CAAGATCAGCTGCACATAATTCTAC 58.343 40.000 9.47 0.00 0.00 2.59
3847 4449 6.268387 ACCCAAACAAAGATCAAATCATGACT 59.732 34.615 0.00 0.00 41.93 3.41
3883 4485 7.441157 TGTCATGCTGTGCCTATATTTAAGTAC 59.559 37.037 0.00 0.00 0.00 2.73
3962 4564 3.037549 CTCCTCTTTGGATGCTAGTCCT 58.962 50.000 1.42 0.00 45.16 3.85
3989 4591 0.179059 ACCATGCGGCGACATAATCA 60.179 50.000 12.98 0.00 34.57 2.57
4098 4700 8.649973 ATCGAAATATCTGTACCTTCAGAAAC 57.350 34.615 0.00 0.00 45.65 2.78
4456 5058 4.101430 AGACAATGTTGAAAATTGGCCACT 59.899 37.500 10.27 0.00 42.98 4.00
4513 5115 2.325484 TGTAGAAGACCAGTTGGCAGA 58.675 47.619 0.00 0.00 39.32 4.26
4635 5237 0.661020 CCGTTCCACACAACCACTTC 59.339 55.000 0.00 0.00 0.00 3.01
4733 5335 5.064452 GCTTGTACTGTCCATTGAAGAGATG 59.936 44.000 0.00 0.00 0.00 2.90
4790 5392 4.258935 TCTAAGAACATCGCGAATTTGC 57.741 40.909 15.24 7.68 0.00 3.68
4809 5411 4.624913 TCCACTGGATTTACTCATCCTCT 58.375 43.478 0.00 0.00 43.12 3.69
4810 5412 5.359194 TTCCACTGGATTTACTCATCCTC 57.641 43.478 0.00 0.00 43.12 3.71
4811 5413 4.384647 GCTTCCACTGGATTTACTCATCCT 60.385 45.833 0.00 0.00 43.12 3.24
4812 5414 3.879892 GCTTCCACTGGATTTACTCATCC 59.120 47.826 0.00 0.00 43.03 3.51
5072 5686 1.532868 CTTGAGCTGTTGCAGTGTACC 59.467 52.381 0.00 0.00 42.74 3.34
5087 5701 1.285023 GGCTGCTTGTGCACTTGAG 59.715 57.895 19.41 13.85 45.31 3.02
5307 5921 7.973388 CGAATTAGCCCTGAAAATCAAAACATA 59.027 33.333 0.00 0.00 0.00 2.29
5309 5923 6.015856 TCGAATTAGCCCTGAAAATCAAAACA 60.016 34.615 0.00 0.00 0.00 2.83
5310 5924 6.386654 TCGAATTAGCCCTGAAAATCAAAAC 58.613 36.000 0.00 0.00 0.00 2.43
5311 5925 6.582677 TCGAATTAGCCCTGAAAATCAAAA 57.417 33.333 0.00 0.00 0.00 2.44
5312 5926 6.183360 GGATCGAATTAGCCCTGAAAATCAAA 60.183 38.462 0.00 0.00 0.00 2.69
5313 5927 5.299279 GGATCGAATTAGCCCTGAAAATCAA 59.701 40.000 0.00 0.00 0.00 2.57
5314 5928 4.821805 GGATCGAATTAGCCCTGAAAATCA 59.178 41.667 0.00 0.00 0.00 2.57
5315 5929 4.216472 GGGATCGAATTAGCCCTGAAAATC 59.784 45.833 0.00 0.00 42.16 2.17
5316 5930 4.145052 GGGATCGAATTAGCCCTGAAAAT 58.855 43.478 0.00 0.00 42.16 1.82
5317 5931 3.551846 GGGATCGAATTAGCCCTGAAAA 58.448 45.455 0.00 0.00 42.16 2.29
5318 5932 3.208747 GGGATCGAATTAGCCCTGAAA 57.791 47.619 0.00 0.00 42.16 2.69
5319 5933 2.930826 GGGATCGAATTAGCCCTGAA 57.069 50.000 0.00 0.00 42.16 3.02
5503 6130 2.174334 CCGGTTCTTGTGGCATCTG 58.826 57.895 0.00 0.00 0.00 2.90
5538 6165 6.606234 TTGCGTCTGTACTGATGTTAAAAA 57.394 33.333 19.48 7.53 0.00 1.94
5539 6166 5.333798 GCTTGCGTCTGTACTGATGTTAAAA 60.334 40.000 19.48 10.58 0.00 1.52
5540 6167 4.151689 GCTTGCGTCTGTACTGATGTTAAA 59.848 41.667 19.48 12.39 0.00 1.52
5541 6168 3.678072 GCTTGCGTCTGTACTGATGTTAA 59.322 43.478 19.48 14.64 0.00 2.01
5542 6169 3.250744 GCTTGCGTCTGTACTGATGTTA 58.749 45.455 19.48 9.40 0.00 2.41
5543 6170 2.069273 GCTTGCGTCTGTACTGATGTT 58.931 47.619 19.48 0.00 0.00 2.71
5544 6171 1.714794 GCTTGCGTCTGTACTGATGT 58.285 50.000 19.48 0.00 0.00 3.06
5545 6172 0.642291 CGCTTGCGTCTGTACTGATG 59.358 55.000 15.57 15.57 0.00 3.07
5546 6173 1.078759 GCGCTTGCGTCTGTACTGAT 61.079 55.000 16.38 0.00 0.00 2.90
5547 6174 1.733041 GCGCTTGCGTCTGTACTGA 60.733 57.895 16.38 0.00 0.00 3.41
5548 6175 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
5549 6176 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
5550 6177 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
5551 6178 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
5552 6179 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
5553 6180 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
5554 6181 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
5555 6182 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
5556 6183 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
5557 6184 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
5558 6185 0.111089 GCGTGTATATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
5559 6186 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
5560 6187 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
5561 6188 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
5564 6191 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
5565 6192 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
5566 6193 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
5567 6194 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
5568 6195 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
5569 6196 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
5570 6197 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
5571 6198 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
5572 6199 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
5573 6200 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
5574 6201 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
5575 6202 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
5576 6203 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
5577 6204 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
5578 6205 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
5579 6206 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
5580 6207 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
5581 6208 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
5582 6209 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
5583 6210 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
5584 6211 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
5585 6212 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
5586 6213 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
5587 6214 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
5588 6215 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
5589 6216 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
5590 6217 0.669318 ACGTGTGTGCGTTCATAGGG 60.669 55.000 0.00 0.00 43.04 3.53
5591 6218 1.652124 GTACGTGTGTGCGTTCATAGG 59.348 52.381 0.00 0.00 43.04 2.57
5592 6219 2.090041 GTGTACGTGTGTGCGTTCATAG 59.910 50.000 0.00 0.00 43.04 2.23
5593 6220 2.052891 GTGTACGTGTGTGCGTTCATA 58.947 47.619 0.00 0.00 43.04 2.15
5594 6221 0.856641 GTGTACGTGTGTGCGTTCAT 59.143 50.000 0.00 0.00 43.04 2.57
5595 6222 0.179132 AGTGTACGTGTGTGCGTTCA 60.179 50.000 0.00 0.00 43.04 3.18
5596 6223 0.501435 GAGTGTACGTGTGTGCGTTC 59.499 55.000 0.00 0.00 43.04 3.95
5597 6224 0.101759 AGAGTGTACGTGTGTGCGTT 59.898 50.000 0.00 0.00 43.04 4.84
5599 6226 1.324718 GTAGAGTGTACGTGTGTGCG 58.675 55.000 0.00 0.00 32.77 5.34
5600 6227 1.668047 GGGTAGAGTGTACGTGTGTGC 60.668 57.143 0.00 0.00 0.00 4.57
5601 6228 1.884579 AGGGTAGAGTGTACGTGTGTG 59.115 52.381 0.00 0.00 0.00 3.82
5602 6229 2.283145 AGGGTAGAGTGTACGTGTGT 57.717 50.000 0.00 0.00 0.00 3.72
5603 6230 3.943381 TCATAGGGTAGAGTGTACGTGTG 59.057 47.826 0.00 0.00 0.00 3.82
5604 6231 4.197750 CTCATAGGGTAGAGTGTACGTGT 58.802 47.826 0.00 0.00 0.00 4.49
5605 6232 3.003482 GCTCATAGGGTAGAGTGTACGTG 59.997 52.174 0.00 0.00 34.39 4.49
5606 6233 3.212685 GCTCATAGGGTAGAGTGTACGT 58.787 50.000 0.00 0.00 34.39 3.57
5607 6234 3.211865 TGCTCATAGGGTAGAGTGTACG 58.788 50.000 0.00 0.00 34.39 3.67
5608 6235 5.074115 AGATGCTCATAGGGTAGAGTGTAC 58.926 45.833 0.00 0.00 34.39 2.90
5609 6236 5.317808 GAGATGCTCATAGGGTAGAGTGTA 58.682 45.833 0.00 0.00 34.39 2.90
5610 6237 4.148838 GAGATGCTCATAGGGTAGAGTGT 58.851 47.826 0.00 0.00 34.39 3.55
5611 6238 3.509575 GGAGATGCTCATAGGGTAGAGTG 59.490 52.174 0.00 0.00 34.39 3.51
5612 6239 3.773560 GGAGATGCTCATAGGGTAGAGT 58.226 50.000 0.00 0.00 34.39 3.24
5613 6240 2.752354 CGGAGATGCTCATAGGGTAGAG 59.248 54.545 0.00 0.00 35.01 2.43
5614 6241 2.375509 TCGGAGATGCTCATAGGGTAGA 59.624 50.000 0.00 0.00 31.08 2.59
5615 6242 2.796557 TCGGAGATGCTCATAGGGTAG 58.203 52.381 0.00 0.00 31.08 3.18
5616 6243 2.971901 TCGGAGATGCTCATAGGGTA 57.028 50.000 0.00 0.00 31.08 3.69
5617 6244 2.088104 TTCGGAGATGCTCATAGGGT 57.912 50.000 0.00 0.00 35.04 4.34
5618 6245 2.630098 TCTTTCGGAGATGCTCATAGGG 59.370 50.000 0.00 0.00 35.04 3.53
5619 6246 3.320541 AGTCTTTCGGAGATGCTCATAGG 59.679 47.826 0.00 0.00 36.61 2.57
5620 6247 4.037327 TCAGTCTTTCGGAGATGCTCATAG 59.963 45.833 0.00 0.00 36.61 2.23
5621 6248 3.954258 TCAGTCTTTCGGAGATGCTCATA 59.046 43.478 0.00 0.00 36.61 2.15
5622 6249 2.762887 TCAGTCTTTCGGAGATGCTCAT 59.237 45.455 0.00 0.00 36.61 2.90
5623 6250 2.165234 CTCAGTCTTTCGGAGATGCTCA 59.835 50.000 0.00 0.00 40.01 4.26
5624 6251 2.808244 CTCAGTCTTTCGGAGATGCTC 58.192 52.381 0.00 0.00 40.01 4.26
5625 6252 1.134848 GCTCAGTCTTTCGGAGATGCT 60.135 52.381 0.00 0.00 40.01 3.79
5626 6253 1.285578 GCTCAGTCTTTCGGAGATGC 58.714 55.000 0.00 0.00 40.01 3.91
5627 6254 1.800655 CGGCTCAGTCTTTCGGAGATG 60.801 57.143 0.00 0.00 40.01 2.90
5628 6255 0.457851 CGGCTCAGTCTTTCGGAGAT 59.542 55.000 0.00 0.00 40.01 2.75
5629 6256 1.595993 CCGGCTCAGTCTTTCGGAGA 61.596 60.000 0.00 0.00 42.94 3.71
5630 6257 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
5631 6258 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
5632 6259 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
5633 6260 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
5634 6261 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
5635 6262 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
5636 6263 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
5637 6264 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
5638 6265 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
5639 6266 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
5640 6267 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
5641 6268 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
5642 6269 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
5643 6270 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
5644 6271 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
5645 6272 6.820152 TCATAAATCTCAAGATGATATGCCGG 59.180 38.462 0.00 0.00 36.32 6.13
5646 6273 7.838771 TCATAAATCTCAAGATGATATGCCG 57.161 36.000 15.00 0.00 36.32 5.69
5647 6274 9.228949 ACTTCATAAATCTCAAGATGATATGCC 57.771 33.333 15.00 0.00 36.32 4.40
5651 6278 9.770097 GGTGACTTCATAAATCTCAAGATGATA 57.230 33.333 0.00 0.00 34.49 2.15
5652 6279 7.440556 CGGTGACTTCATAAATCTCAAGATGAT 59.559 37.037 0.00 0.00 34.49 2.45
5653 6280 6.758416 CGGTGACTTCATAAATCTCAAGATGA 59.242 38.462 0.00 0.00 34.49 2.92
5654 6281 6.536582 ACGGTGACTTCATAAATCTCAAGATG 59.463 38.462 0.00 0.00 34.49 2.90
5655 6282 6.644347 ACGGTGACTTCATAAATCTCAAGAT 58.356 36.000 0.00 0.00 36.07 2.40
5656 6283 6.037786 ACGGTGACTTCATAAATCTCAAGA 57.962 37.500 0.00 0.00 0.00 3.02
5657 6284 7.221067 GTCTACGGTGACTTCATAAATCTCAAG 59.779 40.741 0.00 0.00 34.39 3.02
5658 6285 7.033791 GTCTACGGTGACTTCATAAATCTCAA 58.966 38.462 0.00 0.00 34.39 3.02
5659 6286 6.561614 GTCTACGGTGACTTCATAAATCTCA 58.438 40.000 0.00 0.00 34.39 3.27
5660 6287 5.681982 CGTCTACGGTGACTTCATAAATCTC 59.318 44.000 8.11 0.00 35.00 2.75
5661 6288 5.579718 CGTCTACGGTGACTTCATAAATCT 58.420 41.667 8.11 0.00 35.00 2.40
5662 6289 4.206609 GCGTCTACGGTGACTTCATAAATC 59.793 45.833 4.49 0.00 40.23 2.17
5663 6290 4.110482 GCGTCTACGGTGACTTCATAAAT 58.890 43.478 4.49 0.00 40.23 1.40
5664 6291 3.504863 GCGTCTACGGTGACTTCATAAA 58.495 45.455 4.49 0.00 40.23 1.40
5665 6292 2.159338 GGCGTCTACGGTGACTTCATAA 60.159 50.000 4.49 0.00 40.23 1.90
5666 6293 1.402968 GGCGTCTACGGTGACTTCATA 59.597 52.381 4.49 0.00 40.23 2.15
5667 6294 0.172803 GGCGTCTACGGTGACTTCAT 59.827 55.000 4.49 0.00 40.23 2.57
5668 6295 0.892358 AGGCGTCTACGGTGACTTCA 60.892 55.000 4.49 0.00 40.23 3.02
5669 6296 0.179169 GAGGCGTCTACGGTGACTTC 60.179 60.000 4.49 0.00 40.23 3.01
5670 6297 1.881602 GAGGCGTCTACGGTGACTT 59.118 57.895 4.49 0.00 40.23 3.01
5671 6298 2.396955 CGAGGCGTCTACGGTGACT 61.397 63.158 4.69 0.00 40.23 3.41
5672 6299 2.099831 CGAGGCGTCTACGGTGAC 59.900 66.667 4.69 0.00 40.23 3.67
5673 6300 2.359107 ACGAGGCGTCTACGGTGA 60.359 61.111 12.25 0.00 33.69 4.02
5700 6327 1.609794 AGTGGGAGGAGACGGGAAC 60.610 63.158 0.00 0.00 0.00 3.62
5701 6328 1.609501 CAGTGGGAGGAGACGGGAA 60.610 63.158 0.00 0.00 0.00 3.97
5702 6329 2.037367 CAGTGGGAGGAGACGGGA 59.963 66.667 0.00 0.00 0.00 5.14
5703 6330 2.037367 TCAGTGGGAGGAGACGGG 59.963 66.667 0.00 0.00 0.00 5.28
5704 6331 3.609703 CTCAGTGGGAGGAGACGG 58.390 66.667 0.00 0.00 40.13 4.79
5716 6343 2.433145 CGGCGATGCACACTCAGT 60.433 61.111 0.00 0.00 0.00 3.41
5717 6344 3.190849 CCGGCGATGCACACTCAG 61.191 66.667 9.30 0.00 0.00 3.35
5718 6345 2.723586 TTTCCGGCGATGCACACTCA 62.724 55.000 9.30 0.00 0.00 3.41
5719 6346 1.369091 ATTTCCGGCGATGCACACTC 61.369 55.000 9.30 0.00 0.00 3.51
5720 6347 1.369091 GATTTCCGGCGATGCACACT 61.369 55.000 9.30 0.00 0.00 3.55
5721 6348 1.062525 GATTTCCGGCGATGCACAC 59.937 57.895 9.30 0.00 0.00 3.82
5722 6349 2.112198 GGATTTCCGGCGATGCACA 61.112 57.895 9.30 0.00 0.00 4.57
5723 6350 1.819632 AGGATTTCCGGCGATGCAC 60.820 57.895 9.30 0.00 42.08 4.57
5724 6351 1.819208 CAGGATTTCCGGCGATGCA 60.819 57.895 9.30 0.00 42.08 3.96
5725 6352 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
5726 6353 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
5727 6354 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
5728 6355 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
5729 6356 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
5730 6357 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
5731 6358 6.463995 TTGGATTTATTTCAGGATTTCCGG 57.536 37.500 0.00 0.00 42.08 5.14
5732 6359 8.770438 TTTTTGGATTTATTTCAGGATTTCCG 57.230 30.769 0.00 0.00 42.08 4.30
5739 6366 9.919348 CGCATTTATTTTTGGATTTATTTCAGG 57.081 29.630 0.00 0.00 0.00 3.86
5746 6373 8.855279 CGAGTTTCGCATTTATTTTTGGATTTA 58.145 29.630 0.00 0.00 31.14 1.40
5747 6374 7.383843 ACGAGTTTCGCATTTATTTTTGGATTT 59.616 29.630 0.00 0.00 45.12 2.17
5748 6375 6.866248 ACGAGTTTCGCATTTATTTTTGGATT 59.134 30.769 0.00 0.00 45.12 3.01
5749 6376 6.386654 ACGAGTTTCGCATTTATTTTTGGAT 58.613 32.000 0.00 0.00 45.12 3.41
5750 6377 5.764131 ACGAGTTTCGCATTTATTTTTGGA 58.236 33.333 0.00 0.00 45.12 3.53
5751 6378 6.288419 CAACGAGTTTCGCATTTATTTTTGG 58.712 36.000 0.00 0.00 45.12 3.28
5752 6379 6.288419 CCAACGAGTTTCGCATTTATTTTTG 58.712 36.000 0.00 0.00 45.12 2.44
5753 6380 5.107645 GCCAACGAGTTTCGCATTTATTTTT 60.108 36.000 0.00 0.00 45.12 1.94
5754 6381 4.384547 GCCAACGAGTTTCGCATTTATTTT 59.615 37.500 0.00 0.00 45.12 1.82
5755 6382 3.917985 GCCAACGAGTTTCGCATTTATTT 59.082 39.130 0.00 0.00 45.12 1.40
5756 6383 3.190535 AGCCAACGAGTTTCGCATTTATT 59.809 39.130 0.00 0.00 45.12 1.40
5757 6384 2.747446 AGCCAACGAGTTTCGCATTTAT 59.253 40.909 0.00 0.00 45.12 1.40
5758 6385 2.147958 AGCCAACGAGTTTCGCATTTA 58.852 42.857 0.00 0.00 45.12 1.40
5759 6386 0.951558 AGCCAACGAGTTTCGCATTT 59.048 45.000 0.00 0.00 45.12 2.32
5760 6387 2.629002 AGCCAACGAGTTTCGCATT 58.371 47.368 0.00 0.00 45.12 3.56
5761 6388 4.379174 AGCCAACGAGTTTCGCAT 57.621 50.000 0.00 0.00 45.12 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.