Multiple sequence alignment - TraesCS5B01G131000

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G131000 chr5B 100.000 7283 0 0 1 7283 243742770 243750052 0.000000e+00 13450.0
1 TraesCS5B01G131000 chr5B 90.177 621 35 14 2280 2895 117248872 117249471 0.000000e+00 785.0
2 TraesCS5B01G131000 chr5B 92.989 271 16 3 2908 3176 93476444 93476175 6.850000e-105 392.0
3 TraesCS5B01G131000 chr5B 92.308 273 19 2 2902 3173 128671730 128672001 3.190000e-103 387.0
4 TraesCS5B01G131000 chr5B 90.681 279 23 3 2899 3175 117249416 117249693 1.150000e-97 368.0
5 TraesCS5B01G131000 chr5B 91.803 183 15 0 6755 6937 668593651 668593833 9.380000e-64 255.0
6 TraesCS5B01G131000 chr5B 92.857 70 3 2 3289 3358 128672038 128672105 4.650000e-17 100.0
7 TraesCS5B01G131000 chr5B 93.651 63 4 0 3296 3358 93476136 93476074 2.160000e-15 95.3
8 TraesCS5B01G131000 chr5A 95.930 3636 92 19 436 4048 295316195 295319797 0.000000e+00 5843.0
9 TraesCS5B01G131000 chr5A 94.684 997 34 7 4196 5192 295319810 295320787 0.000000e+00 1530.0
10 TraesCS5B01G131000 chr5A 94.939 652 17 1 5892 6527 295321338 295321989 0.000000e+00 1007.0
11 TraesCS5B01G131000 chr5A 89.246 623 40 16 2280 2895 121725053 121724451 0.000000e+00 754.0
12 TraesCS5B01G131000 chr5A 88.673 618 40 13 2280 2895 412224976 412224387 0.000000e+00 726.0
13 TraesCS5B01G131000 chr5A 91.241 548 19 10 5221 5748 295320781 295321319 0.000000e+00 719.0
14 TraesCS5B01G131000 chr5A 87.825 616 42 16 2280 2890 80516159 80515572 0.000000e+00 691.0
15 TraesCS5B01G131000 chr5A 91.852 270 20 2 2908 3176 80515613 80515345 6.900000e-100 375.0
16 TraesCS5B01G131000 chr5A 90.370 270 19 3 2908 3176 121724497 121724234 1.500000e-91 348.0
17 TraesCS5B01G131000 chr5A 89.781 274 21 4 2905 3176 412224437 412224169 1.950000e-90 344.0
18 TraesCS5B01G131000 chr5A 94.836 213 11 0 6318 6530 295324611 295324823 4.210000e-87 333.0
19 TraesCS5B01G131000 chr5A 92.241 232 8 3 6952 7178 295324141 295324367 3.280000e-83 320.0
20 TraesCS5B01G131000 chr5A 92.079 202 9 2 6951 7146 295325015 295325215 2.000000e-70 278.0
21 TraesCS5B01G131000 chr5A 94.048 84 2 1 6589 6672 295322132 295322212 2.760000e-24 124.0
22 TraesCS5B01G131000 chr5A 93.103 58 3 1 6620 6676 295324991 295325048 4.680000e-12 84.2
23 TraesCS5B01G131000 chr5A 90.625 64 3 3 6651 6714 295324970 295325030 1.680000e-11 82.4
24 TraesCS5B01G131000 chr5A 100.000 41 0 0 6529 6569 295322056 295322096 7.840000e-10 76.8
25 TraesCS5B01G131000 chr5A 85.000 60 5 3 5063 5120 567533905 567533848 2.840000e-04 58.4
26 TraesCS5B01G131000 chr5D 95.825 3521 57 27 554 4048 221006803 221010259 0.000000e+00 5605.0
27 TraesCS5B01G131000 chr5D 97.517 1208 26 3 4170 5377 221010256 221011459 0.000000e+00 2061.0
28 TraesCS5B01G131000 chr5D 94.477 1195 22 12 5375 6530 221011582 221012771 0.000000e+00 1801.0
29 TraesCS5B01G131000 chr5D 90.323 620 38 11 2280 2895 118208113 118207512 0.000000e+00 793.0
30 TraesCS5B01G131000 chr5D 89.406 623 39 15 2280 2895 87545975 87545373 0.000000e+00 760.0
31 TraesCS5B01G131000 chr5D 89.050 621 41 13 2280 2895 122073553 122072955 0.000000e+00 745.0
32 TraesCS5B01G131000 chr5D 93.333 270 16 2 2908 3176 118207558 118207290 1.470000e-106 398.0
33 TraesCS5B01G131000 chr5D 92.963 270 17 2 2908 3176 87545419 87545151 6.850000e-105 392.0
34 TraesCS5B01G131000 chr5D 91.544 272 5 4 6952 7218 221013006 221013264 6.950000e-95 359.0
35 TraesCS5B01G131000 chr5D 92.424 198 15 0 2908 3105 122073001 122072804 4.300000e-72 283.0
36 TraesCS5B01G131000 chr5D 89.899 198 5 8 6530 6714 221012825 221013020 2.630000e-59 241.0
37 TraesCS5B01G131000 chr5D 88.000 100 8 2 436 535 221006471 221006566 1.660000e-21 115.0
38 TraesCS5B01G131000 chr5D 96.825 63 2 0 3296 3358 118207251 118207189 9.990000e-19 106.0
39 TraesCS5B01G131000 chr5D 91.667 60 4 1 6618 6676 221012979 221013038 1.680000e-11 82.4
40 TraesCS5B01G131000 chr3D 84.437 1253 105 42 4170 5372 579691919 579693131 0.000000e+00 1151.0
41 TraesCS5B01G131000 chr3D 90.863 394 22 4 1 381 608394314 608394706 3.900000e-142 516.0
42 TraesCS5B01G131000 chr3D 87.555 458 28 12 2281 2738 579690936 579691364 3.030000e-138 503.0
43 TraesCS5B01G131000 chr3D 89.474 304 19 7 5921 6215 579693723 579694022 8.920000e-99 372.0
44 TraesCS5B01G131000 chr3D 81.543 363 50 12 5422 5780 579693285 579693634 4.300000e-72 283.0
45 TraesCS5B01G131000 chr3D 98.462 130 2 0 4045 4174 496172754 496172883 5.680000e-56 230.0
46 TraesCS5B01G131000 chr3A 83.706 1252 115 45 4170 5372 714792318 714793529 0.000000e+00 1099.0
47 TraesCS5B01G131000 chr3A 83.533 1251 116 37 4170 5372 607849578 607850786 0.000000e+00 1086.0
48 TraesCS5B01G131000 chr3A 92.797 236 13 3 5981 6215 607851453 607851685 9.050000e-89 339.0
49 TraesCS5B01G131000 chr3A 91.053 190 16 1 6755 6943 579034672 579034483 9.380000e-64 255.0
50 TraesCS5B01G131000 chr3A 77.751 418 70 17 5375 5780 679873241 679873647 1.220000e-57 235.0
51 TraesCS5B01G131000 chr3A 97.761 134 2 1 4047 4179 348834446 348834579 5.680000e-56 230.0
52 TraesCS5B01G131000 chr3A 87.368 95 8 2 5803 5893 493714847 493714941 9.990000e-19 106.0
53 TraesCS5B01G131000 chr4A 83.307 1264 111 39 4170 5379 557658799 557657582 0.000000e+00 1074.0
54 TraesCS5B01G131000 chr4A 83.320 1259 108 41 4170 5372 554702865 554704077 0.000000e+00 1068.0
55 TraesCS5B01G131000 chr4A 91.966 697 44 7 3360 4048 9635025 9635717 0.000000e+00 966.0
56 TraesCS5B01G131000 chr4A 89.015 619 41 14 2280 2895 538719805 538719211 0.000000e+00 741.0
57 TraesCS5B01G131000 chr4A 86.441 354 31 6 2905 3255 9634576 9634915 8.920000e-99 372.0
58 TraesCS5B01G131000 chr4A 92.350 183 14 0 6755 6937 719077194 719077376 2.020000e-65 261.0
59 TraesCS5B01G131000 chr4A 97.761 134 3 0 4043 4176 729151838 729151971 1.580000e-56 231.0
60 TraesCS5B01G131000 chr4A 97.744 133 3 0 4044 4176 668166018 668166150 5.680000e-56 230.0
61 TraesCS5B01G131000 chr4A 93.651 63 4 0 3296 3358 538718956 538718894 2.160000e-15 95.3
62 TraesCS5B01G131000 chr4A 95.082 61 2 1 6694 6754 713987505 713987446 2.160000e-15 95.3
63 TraesCS5B01G131000 chr6D 84.089 1081 94 36 4345 5372 430998650 430999705 0.000000e+00 972.0
64 TraesCS5B01G131000 chr6D 87.725 611 38 14 2281 2891 430997330 430997903 0.000000e+00 678.0
65 TraesCS5B01G131000 chr6D 84.630 527 41 13 4396 4900 445172578 445173086 8.490000e-134 488.0
66 TraesCS5B01G131000 chr6D 88.304 342 22 6 2905 3240 430997858 430998187 1.900000e-105 394.0
67 TraesCS5B01G131000 chr6D 90.957 188 14 3 6755 6941 467827435 467827250 4.360000e-62 250.0
68 TraesCS5B01G131000 chr6D 86.782 174 21 2 5375 5547 430999770 430999942 7.460000e-45 193.0
69 TraesCS5B01G131000 chr6A 82.661 1090 105 41 4345 5380 137659376 137658317 0.000000e+00 889.0
70 TraesCS5B01G131000 chr6A 93.739 559 28 5 3495 4048 121721541 121720985 0.000000e+00 832.0
71 TraesCS5B01G131000 chr6A 88.169 617 46 12 2281 2895 137660254 137659663 0.000000e+00 710.0
72 TraesCS5B01G131000 chr6A 88.945 597 36 11 2281 2876 577830825 577831392 0.000000e+00 710.0
73 TraesCS5B01G131000 chr6A 87.601 621 47 12 2280 2896 125151224 125151818 0.000000e+00 693.0
74 TraesCS5B01G131000 chr6A 90.580 276 15 8 2905 3176 125151767 125152035 8.990000e-94 355.0
75 TraesCS5B01G131000 chr6A 89.161 286 21 3 2905 3188 137659713 137659436 1.500000e-91 348.0
76 TraesCS5B01G131000 chr6A 88.000 100 6 3 5799 5898 77986015 77986108 5.970000e-21 113.0
77 TraesCS5B01G131000 chr6A 86.139 101 8 3 5798 5898 78016700 78016794 3.590000e-18 104.0
78 TraesCS5B01G131000 chr1B 86.836 828 59 19 4170 4979 146944132 146943337 0.000000e+00 880.0
79 TraesCS5B01G131000 chr1B 86.715 828 61 18 4170 4979 116254195 116254991 0.000000e+00 874.0
80 TraesCS5B01G131000 chr1B 92.665 559 36 3 3495 4048 596179454 596180012 0.000000e+00 800.0
81 TraesCS5B01G131000 chr1B 91.413 559 43 3 3495 4048 143105456 143106014 0.000000e+00 761.0
82 TraesCS5B01G131000 chr1B 89.303 617 34 10 2280 2895 640618093 640617508 0.000000e+00 745.0
83 TraesCS5B01G131000 chr1B 91.734 496 31 5 3555 4048 116253711 116254198 0.000000e+00 680.0
84 TraesCS5B01G131000 chr1B 84.796 638 44 24 4170 4791 143106011 143106611 6.290000e-165 592.0
85 TraesCS5B01G131000 chr1B 92.350 183 14 0 6755 6937 338044179 338043997 2.020000e-65 261.0
86 TraesCS5B01G131000 chr1B 91.803 183 15 0 6755 6937 397661599 397661781 9.380000e-64 255.0
87 TraesCS5B01G131000 chr1B 97.059 136 4 0 4045 4180 623731983 623732118 5.680000e-56 230.0
88 TraesCS5B01G131000 chr1B 83.636 110 12 5 5790 5897 345311244 345311139 1.670000e-16 99.0
89 TraesCS5B01G131000 chr1A 93.381 559 32 3 3495 4048 86041013 86040455 0.000000e+00 822.0
90 TraesCS5B01G131000 chr1A 87.419 461 29 12 2281 2741 86041457 86041026 3.030000e-138 503.0
91 TraesCS5B01G131000 chr1A 90.258 349 16 7 2280 2627 556838646 556838977 2.410000e-119 440.0
92 TraesCS5B01G131000 chr1A 90.876 274 14 4 2905 3176 556839129 556839393 2.500000e-94 357.0
93 TraesCS5B01G131000 chr1A 81.163 361 55 9 5422 5780 86039667 86039318 2.000000e-70 278.0
94 TraesCS5B01G131000 chr1A 88.318 214 16 5 2684 2895 556838973 556839179 1.570000e-61 248.0
95 TraesCS5B01G131000 chr1A 96.552 58 2 0 6697 6754 3221070 3221127 6.010000e-16 97.1
96 TraesCS5B01G131000 chr1A 93.651 63 4 0 3296 3358 556839409 556839471 2.160000e-15 95.3
97 TraesCS5B01G131000 chr3B 81.667 1080 96 39 4345 5372 550789849 550790878 0.000000e+00 804.0
98 TraesCS5B01G131000 chr3B 86.677 638 38 19 4170 4791 734909833 734909227 0.000000e+00 664.0
99 TraesCS5B01G131000 chr3B 84.796 638 44 19 4170 4791 774222177 774222777 6.290000e-165 592.0
100 TraesCS5B01G131000 chr3B 88.301 359 25 7 2905 3255 550789165 550789514 1.460000e-111 414.0
101 TraesCS5B01G131000 chr3B 93.220 236 12 3 5981 6215 774223455 774223687 1.950000e-90 344.0
102 TraesCS5B01G131000 chr3B 92.797 236 13 3 5981 6215 734908534 734908302 9.050000e-89 339.0
103 TraesCS5B01G131000 chr3B 91.630 227 11 3 3360 3578 550789624 550789850 2.550000e-79 307.0
104 TraesCS5B01G131000 chr3B 91.848 184 14 1 6755 6937 511628944 511628761 9.380000e-64 255.0
105 TraesCS5B01G131000 chr3B 97.143 105 1 1 2281 2383 734910946 734910842 7.510000e-40 176.0
106 TraesCS5B01G131000 chr3B 98.246 57 1 0 6698 6754 174904345 174904289 4.650000e-17 100.0
107 TraesCS5B01G131000 chr3B 95.082 61 2 1 6694 6754 511628957 511628898 2.160000e-15 95.3
108 TraesCS5B01G131000 chr6B 89.644 618 34 12 2280 2895 153235749 153235160 0.000000e+00 760.0
109 TraesCS5B01G131000 chr6B 93.066 274 16 3 2905 3176 153235210 153234938 1.470000e-106 398.0
110 TraesCS5B01G131000 chr6B 91.803 183 15 0 6755 6937 75528702 75528884 9.380000e-64 255.0
111 TraesCS5B01G131000 chr6B 98.246 57 1 0 6698 6754 578466359 578466303 4.650000e-17 100.0
112 TraesCS5B01G131000 chr6B 98.246 57 1 0 6698 6754 699155958 699156014 4.650000e-17 100.0
113 TraesCS5B01G131000 chr6B 92.063 63 5 0 3296 3358 153234899 153234837 1.010000e-13 89.8
114 TraesCS5B01G131000 chr7B 91.238 525 40 4 3530 4048 7002608 7003132 0.000000e+00 710.0
115 TraesCS5B01G131000 chr7B 92.735 234 13 3 5983 6215 7013782 7014012 1.170000e-87 335.0
116 TraesCS5B01G131000 chr7B 80.899 356 53 10 5422 5774 7013272 7013615 4.330000e-67 267.0
117 TraesCS5B01G131000 chr1D 85.981 642 45 17 4170 4796 64340603 64341214 0.000000e+00 645.0
118 TraesCS5B01G131000 chr1D 86.050 638 35 25 4170 4791 96031482 96030883 2.870000e-178 636.0
119 TraesCS5B01G131000 chr1D 84.301 637 48 23 4170 4791 439408015 439408614 6.340000e-160 575.0
120 TraesCS5B01G131000 chr1D 87.976 499 32 11 2280 2775 464438989 464439462 1.370000e-156 564.0
121 TraesCS5B01G131000 chr1D 88.938 452 22 10 2281 2732 439407005 439407428 3.870000e-147 532.0
122 TraesCS5B01G131000 chr1D 93.296 358 19 2 2474 2831 96032385 96032033 2.330000e-144 523.0
123 TraesCS5B01G131000 chr1D 92.778 360 19 4 2474 2833 64339730 64340082 1.400000e-141 514.0
124 TraesCS5B01G131000 chr1D 92.797 236 13 3 5981 6215 439409314 439409546 9.050000e-89 339.0
125 TraesCS5B01G131000 chr1D 81.543 363 50 12 5422 5780 439408805 439409154 4.300000e-72 283.0
126 TraesCS5B01G131000 chr1D 80.387 362 56 10 5422 5780 64341364 64341713 2.020000e-65 261.0
127 TraesCS5B01G131000 chr1D 97.143 105 1 1 2281 2383 64339494 64339598 7.510000e-40 176.0
128 TraesCS5B01G131000 chr1D 95.238 105 3 1 2281 2383 96032619 96032515 1.630000e-36 165.0
129 TraesCS5B01G131000 chr1D 89.130 92 7 3 5802 5893 268535862 268535950 2.150000e-20 111.0
130 TraesCS5B01G131000 chr4D 91.111 405 17 7 3362 3754 57873530 57873927 1.390000e-146 531.0
131 TraesCS5B01G131000 chr4D 92.120 368 21 4 22 382 274458516 274458150 5.040000e-141 512.0
132 TraesCS5B01G131000 chr4D 89.313 393 20 9 2282 2669 57872275 57872650 2.380000e-129 473.0
133 TraesCS5B01G131000 chr4D 90.171 234 15 4 2663 2895 57872976 57873202 1.540000e-76 298.0
134 TraesCS5B01G131000 chr4D 94.253 87 4 1 2905 2990 57873152 57873238 1.650000e-26 132.0
135 TraesCS5B01G131000 chr4D 95.161 62 2 1 6694 6754 8001367 8001306 6.010000e-16 97.1
136 TraesCS5B01G131000 chr7D 91.927 384 22 3 1 375 515813472 515813089 5.000000e-146 529.0
137 TraesCS5B01G131000 chr7D 100.000 29 0 0 949 977 356590491 356590463 4.000000e-03 54.7
138 TraesCS5B01G131000 chr2A 91.451 386 23 7 1 381 611092611 611092991 8.370000e-144 521.0
139 TraesCS5B01G131000 chr2A 86.000 100 13 1 5803 5901 73160171 73160072 9.990000e-19 106.0
140 TraesCS5B01G131000 chr2B 93.644 236 11 3 5981 6215 755335148 755335380 4.180000e-92 350.0
141 TraesCS5B01G131000 chr2B 91.257 183 16 0 6755 6937 790114609 790114791 4.360000e-62 250.0
142 TraesCS5B01G131000 chr2B 95.082 61 3 0 6694 6754 790114595 790114655 6.010000e-16 97.1
143 TraesCS5B01G131000 chr2D 98.473 131 2 0 4047 4177 561025748 561025618 1.580000e-56 231.0
144 TraesCS5B01G131000 chr2D 95.804 143 5 1 4034 4175 201306437 201306295 5.680000e-56 230.0
145 TraesCS5B01G131000 chr2D 94.558 147 5 3 4041 4186 326403644 326403500 2.640000e-54 224.0
146 TraesCS5B01G131000 chr7A 97.080 137 3 1 4044 4179 343843843 343843707 5.680000e-56 230.0
147 TraesCS5B01G131000 chr7A 98.246 57 1 0 6698 6754 162572346 162572290 4.650000e-17 100.0
148 TraesCS5B01G131000 chr7A 84.932 73 8 3 5845 5917 375886541 375886472 3.650000e-08 71.3
149 TraesCS5B01G131000 chr7A 100.000 29 0 0 5063 5091 572498659 572498631 4.000000e-03 54.7
150 TraesCS5B01G131000 chrUn 90.361 83 6 2 5813 5893 255365221 255365139 2.780000e-19 108.0
151 TraesCS5B01G131000 chrUn 90.361 83 6 2 5813 5893 365038400 365038482 2.780000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G131000 chr5B 243742770 243750052 7282 False 13450.000000 13450 100.000000 1 7283 1 chr5B.!!$F1 7282
1 TraesCS5B01G131000 chr5B 117248872 117249693 821 False 576.500000 785 90.429000 2280 3175 2 chr5B.!!$F3 895
2 TraesCS5B01G131000 chr5A 295316195 295325215 9020 False 945.218182 5843 93.975091 436 7178 11 chr5A.!!$F1 6742
3 TraesCS5B01G131000 chr5A 121724234 121725053 819 True 551.000000 754 89.808000 2280 3176 2 chr5A.!!$R3 896
4 TraesCS5B01G131000 chr5A 412224169 412224976 807 True 535.000000 726 89.227000 2280 3176 2 chr5A.!!$R4 896
5 TraesCS5B01G131000 chr5A 80515345 80516159 814 True 533.000000 691 89.838500 2280 3176 2 chr5A.!!$R2 896
6 TraesCS5B01G131000 chr5D 221006471 221013264 6793 False 1466.342857 5605 92.704143 436 7218 7 chr5D.!!$F1 6782
7 TraesCS5B01G131000 chr5D 87545151 87545975 824 True 576.000000 760 91.184500 2280 3176 2 chr5D.!!$R1 896
8 TraesCS5B01G131000 chr5D 122072804 122073553 749 True 514.000000 745 90.737000 2280 3105 2 chr5D.!!$R3 825
9 TraesCS5B01G131000 chr5D 118207189 118208113 924 True 432.333333 793 93.493667 2280 3358 3 chr5D.!!$R2 1078
10 TraesCS5B01G131000 chr3D 579690936 579694022 3086 False 577.250000 1151 85.752250 2281 6215 4 chr3D.!!$F3 3934
11 TraesCS5B01G131000 chr3A 714792318 714793529 1211 False 1099.000000 1099 83.706000 4170 5372 1 chr3A.!!$F4 1202
12 TraesCS5B01G131000 chr3A 607849578 607851685 2107 False 712.500000 1086 88.165000 4170 6215 2 chr3A.!!$F5 2045
13 TraesCS5B01G131000 chr4A 557657582 557658799 1217 True 1074.000000 1074 83.307000 4170 5379 1 chr4A.!!$R1 1209
14 TraesCS5B01G131000 chr4A 554702865 554704077 1212 False 1068.000000 1068 83.320000 4170 5372 1 chr4A.!!$F1 1202
15 TraesCS5B01G131000 chr4A 9634576 9635717 1141 False 669.000000 966 89.203500 2905 4048 2 chr4A.!!$F5 1143
16 TraesCS5B01G131000 chr4A 538718894 538719805 911 True 418.150000 741 91.333000 2280 3358 2 chr4A.!!$R3 1078
17 TraesCS5B01G131000 chr6D 430997330 430999942 2612 False 559.250000 972 86.725000 2281 5547 4 chr6D.!!$F2 3266
18 TraesCS5B01G131000 chr6D 445172578 445173086 508 False 488.000000 488 84.630000 4396 4900 1 chr6D.!!$F1 504
19 TraesCS5B01G131000 chr6A 121720985 121721541 556 True 832.000000 832 93.739000 3495 4048 1 chr6A.!!$R1 553
20 TraesCS5B01G131000 chr6A 577830825 577831392 567 False 710.000000 710 88.945000 2281 2876 1 chr6A.!!$F3 595
21 TraesCS5B01G131000 chr6A 137658317 137660254 1937 True 649.000000 889 86.663667 2281 5380 3 chr6A.!!$R2 3099
22 TraesCS5B01G131000 chr6A 125151224 125152035 811 False 524.000000 693 89.090500 2280 3176 2 chr6A.!!$F4 896
23 TraesCS5B01G131000 chr1B 146943337 146944132 795 True 880.000000 880 86.836000 4170 4979 1 chr1B.!!$R1 809
24 TraesCS5B01G131000 chr1B 596179454 596180012 558 False 800.000000 800 92.665000 3495 4048 1 chr1B.!!$F2 553
25 TraesCS5B01G131000 chr1B 116253711 116254991 1280 False 777.000000 874 89.224500 3555 4979 2 chr1B.!!$F4 1424
26 TraesCS5B01G131000 chr1B 640617508 640618093 585 True 745.000000 745 89.303000 2280 2895 1 chr1B.!!$R4 615
27 TraesCS5B01G131000 chr1B 143105456 143106611 1155 False 676.500000 761 88.104500 3495 4791 2 chr1B.!!$F5 1296
28 TraesCS5B01G131000 chr1A 86039318 86041457 2139 True 534.333333 822 87.321000 2281 5780 3 chr1A.!!$R1 3499
29 TraesCS5B01G131000 chr1A 556838646 556839471 825 False 285.075000 440 90.775750 2280 3358 4 chr1A.!!$F2 1078
30 TraesCS5B01G131000 chr3B 550789165 550790878 1713 False 508.333333 804 87.199333 2905 5372 3 chr3B.!!$F1 2467
31 TraesCS5B01G131000 chr3B 774222177 774223687 1510 False 468.000000 592 89.008000 4170 6215 2 chr3B.!!$F2 2045
32 TraesCS5B01G131000 chr3B 734908302 734910946 2644 True 393.000000 664 92.205667 2281 6215 3 chr3B.!!$R3 3934
33 TraesCS5B01G131000 chr6B 153234837 153235749 912 True 415.933333 760 91.591000 2280 3358 3 chr6B.!!$R2 1078
34 TraesCS5B01G131000 chr7B 7002608 7003132 524 False 710.000000 710 91.238000 3530 4048 1 chr7B.!!$F1 518
35 TraesCS5B01G131000 chr7B 7013272 7014012 740 False 301.000000 335 86.817000 5422 6215 2 chr7B.!!$F2 793
36 TraesCS5B01G131000 chr1D 96030883 96032619 1736 True 441.333333 636 91.528000 2281 4791 3 chr1D.!!$R1 2510
37 TraesCS5B01G131000 chr1D 439407005 439409546 2541 False 432.250000 575 86.894750 2281 6215 4 chr1D.!!$F4 3934
38 TraesCS5B01G131000 chr1D 64339494 64341713 2219 False 399.000000 645 89.072250 2281 5780 4 chr1D.!!$F3 3499
39 TraesCS5B01G131000 chr4D 57872275 57873927 1652 False 358.500000 531 91.212000 2282 3754 4 chr4D.!!$F1 1472

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.032130 GTCGTGTGGCTGTGAAGAGA 59.968 55.000 0.0 0.0 0.00 3.10 F
417 418 0.175760 TGTGATACGAGCAAGAGCCC 59.824 55.000 0.0 0.0 43.56 5.19 F
1839 2092 0.392595 CGCCAAGGTAACCCTCTTCC 60.393 60.000 0.0 0.0 41.56 3.46 F
3061 3816 2.383855 TCCACCTGAAAAGGTTGGTTG 58.616 47.619 0.0 0.0 40.85 3.77 F
3381 4191 0.447801 GCCAAGTATTGTGAGTGCCG 59.552 55.000 0.0 0.0 46.99 5.69 F
4062 5051 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.0 0.0 0.00 4.12 F
4064 5053 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.0 0.0 0.00 2.44 F
4067 5056 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.0 0.0 0.00 2.17 F
5881 7162 0.036306 GAGGGACAAGCTTTTCCGGA 59.964 55.000 22.3 0.0 32.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2193 2446 2.322355 CCTACATCAGGCAGTTGAGG 57.678 55.000 0.00 0.00 37.70 3.86 R
2386 2641 4.514401 AGTCGCCAAGTTCTAATAAAGGG 58.486 43.478 0.00 0.00 0.00 3.95 R
3381 4191 1.109323 AGGCCTTCACAACTGCCAAC 61.109 55.000 0.00 0.00 46.45 3.77 R
4044 5033 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73 R
4488 5483 0.650512 CCGCACCTAGCAAATACGTG 59.349 55.000 0.00 0.00 46.13 4.49 R
5805 7063 0.606673 AGCTTTTTCGGACAGAGGGC 60.607 55.000 0.00 0.00 0.00 5.19 R
5864 7145 0.811281 CATCCGGAAAAGCTTGTCCC 59.189 55.000 26.94 14.52 0.00 4.46 R
5930 7260 2.238521 CAAACCAGCATACCACCAGTT 58.761 47.619 0.00 0.00 0.00 3.16 R
7224 10620 0.172803 GAGAAGCGGGCTCTTCGTTA 59.827 55.000 12.05 0.00 45.28 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.465512 GATGCTGCGTTGCCGGTG 62.466 66.667 1.90 0.00 33.68 4.94
57 58 2.676121 CGGTGGCCATGGCAGAAA 60.676 61.111 36.56 17.04 44.11 2.52
58 59 2.703798 CGGTGGCCATGGCAGAAAG 61.704 63.158 36.56 19.64 44.11 2.62
59 60 1.607467 GGTGGCCATGGCAGAAAGT 60.607 57.895 36.56 0.00 44.11 2.66
60 61 1.187567 GGTGGCCATGGCAGAAAGTT 61.188 55.000 36.56 0.00 44.11 2.66
61 62 0.037975 GTGGCCATGGCAGAAAGTTG 60.038 55.000 36.56 0.00 44.11 3.16
62 63 1.079612 GGCCATGGCAGAAAGTTGC 60.080 57.895 36.56 13.39 44.11 4.17
63 64 1.444895 GCCATGGCAGAAAGTTGCG 60.445 57.895 32.08 0.00 45.00 4.85
64 65 1.865788 GCCATGGCAGAAAGTTGCGA 61.866 55.000 32.08 0.00 45.00 5.10
65 66 0.109597 CCATGGCAGAAAGTTGCGAC 60.110 55.000 0.00 0.00 45.00 5.19
66 67 0.877071 CATGGCAGAAAGTTGCGACT 59.123 50.000 0.00 0.00 45.00 4.18
67 68 1.135859 CATGGCAGAAAGTTGCGACTC 60.136 52.381 7.17 0.00 45.00 3.36
68 69 0.884704 TGGCAGAAAGTTGCGACTCC 60.885 55.000 7.17 4.40 45.00 3.85
69 70 1.493311 GCAGAAAGTTGCGACTCCG 59.507 57.895 7.17 0.00 34.21 4.63
70 71 0.944311 GCAGAAAGTTGCGACTCCGA 60.944 55.000 7.17 0.00 38.22 4.55
71 72 0.784778 CAGAAAGTTGCGACTCCGAC 59.215 55.000 7.17 0.00 38.22 4.79
72 73 0.663568 AGAAAGTTGCGACTCCGACG 60.664 55.000 7.17 0.00 38.22 5.12
73 74 1.615107 GAAAGTTGCGACTCCGACGG 61.615 60.000 7.84 7.84 38.22 4.79
74 75 2.359570 AAAGTTGCGACTCCGACGGT 62.360 55.000 14.79 0.00 38.22 4.83
75 76 3.103911 GTTGCGACTCCGACGGTG 61.104 66.667 14.79 14.46 38.22 4.94
76 77 4.351938 TTGCGACTCCGACGGTGG 62.352 66.667 19.33 13.23 38.22 4.61
78 79 4.047059 GCGACTCCGACGGTGGAA 62.047 66.667 19.33 0.00 37.64 3.53
79 80 2.882876 CGACTCCGACGGTGGAAT 59.117 61.111 19.33 0.00 37.64 3.01
80 81 1.996786 GCGACTCCGACGGTGGAATA 61.997 60.000 19.33 0.00 37.64 1.75
81 82 0.666913 CGACTCCGACGGTGGAATAT 59.333 55.000 19.33 0.00 37.64 1.28
82 83 1.875514 CGACTCCGACGGTGGAATATA 59.124 52.381 19.33 0.00 37.64 0.86
83 84 2.350197 CGACTCCGACGGTGGAATATAC 60.350 54.545 19.33 2.48 37.64 1.47
84 85 1.605710 ACTCCGACGGTGGAATATACG 59.394 52.381 19.33 0.00 37.64 3.06
85 86 1.875514 CTCCGACGGTGGAATATACGA 59.124 52.381 14.79 0.00 37.64 3.43
86 87 2.486982 CTCCGACGGTGGAATATACGAT 59.513 50.000 14.79 0.00 37.64 3.73
87 88 2.227149 TCCGACGGTGGAATATACGATG 59.773 50.000 14.79 0.00 34.30 3.84
88 89 1.983605 CGACGGTGGAATATACGATGC 59.016 52.381 0.00 0.00 0.00 3.91
89 90 2.606065 CGACGGTGGAATATACGATGCA 60.606 50.000 0.00 0.00 0.00 3.96
90 91 2.987149 GACGGTGGAATATACGATGCAG 59.013 50.000 0.00 0.00 0.00 4.41
91 92 1.726791 CGGTGGAATATACGATGCAGC 59.273 52.381 0.00 0.00 32.87 5.25
92 93 1.726791 GGTGGAATATACGATGCAGCG 59.273 52.381 24.69 24.69 37.29 5.18
93 94 1.126846 GTGGAATATACGATGCAGCGC 59.873 52.381 26.30 6.56 33.86 5.92
94 95 0.366871 GGAATATACGATGCAGCGCG 59.633 55.000 26.30 14.47 33.86 6.86
95 96 0.366871 GAATATACGATGCAGCGCGG 59.633 55.000 26.30 2.11 33.86 6.46
96 97 1.014044 AATATACGATGCAGCGCGGG 61.014 55.000 26.30 3.39 33.86 6.13
97 98 2.835701 ATATACGATGCAGCGCGGGG 62.836 60.000 26.30 0.00 33.86 5.73
101 102 4.314440 GATGCAGCGCGGGGGATA 62.314 66.667 8.83 0.00 0.00 2.59
102 103 4.626081 ATGCAGCGCGGGGGATAC 62.626 66.667 8.83 0.00 0.00 2.24
109 110 4.910585 GCGGGGGATACTGCGGTG 62.911 72.222 8.92 0.00 32.35 4.94
110 111 4.910585 CGGGGGATACTGCGGTGC 62.911 72.222 8.92 0.00 0.00 5.01
111 112 3.792736 GGGGGATACTGCGGTGCA 61.793 66.667 8.92 0.00 36.92 4.57
131 132 2.499685 GCCGTCGGCTATGGAAGT 59.500 61.111 28.98 0.00 46.69 3.01
132 133 1.883084 GCCGTCGGCTATGGAAGTG 60.883 63.158 28.98 0.00 46.69 3.16
133 134 1.883084 CCGTCGGCTATGGAAGTGC 60.883 63.158 0.00 0.00 36.17 4.40
134 135 1.141881 CGTCGGCTATGGAAGTGCT 59.858 57.895 0.00 0.00 0.00 4.40
135 136 1.148157 CGTCGGCTATGGAAGTGCTG 61.148 60.000 0.00 0.00 34.66 4.41
136 137 0.108138 GTCGGCTATGGAAGTGCTGT 60.108 55.000 0.00 0.00 34.91 4.40
137 138 0.108186 TCGGCTATGGAAGTGCTGTG 60.108 55.000 0.00 0.00 34.91 3.66
138 139 1.091771 CGGCTATGGAAGTGCTGTGG 61.092 60.000 0.00 0.00 0.00 4.17
139 140 1.379642 GGCTATGGAAGTGCTGTGGC 61.380 60.000 0.00 0.00 39.26 5.01
140 141 1.709147 GCTATGGAAGTGCTGTGGCG 61.709 60.000 0.00 0.00 42.25 5.69
158 159 1.846648 GCGACAGCGGATTATGACG 59.153 57.895 0.00 0.00 37.58 4.35
159 160 1.548973 GCGACAGCGGATTATGACGG 61.549 60.000 0.00 0.00 35.62 4.79
160 161 1.548973 CGACAGCGGATTATGACGGC 61.549 60.000 0.00 0.00 32.34 5.68
161 162 1.548973 GACAGCGGATTATGACGGCG 61.549 60.000 4.80 4.80 38.33 6.46
162 163 2.661866 AGCGGATTATGACGGCGC 60.662 61.111 6.90 0.00 38.33 6.53
163 164 2.964925 GCGGATTATGACGGCGCA 60.965 61.111 10.83 6.65 0.00 6.09
164 165 2.943345 GCGGATTATGACGGCGCAG 61.943 63.158 10.83 8.25 0.00 5.18
165 166 2.310233 CGGATTATGACGGCGCAGG 61.310 63.158 13.26 4.07 0.00 4.85
216 217 4.663444 GCGGATGCTTCTAGCGAT 57.337 55.556 0.00 0.00 46.26 4.58
217 218 2.148687 GCGGATGCTTCTAGCGATG 58.851 57.895 0.00 0.00 46.26 3.84
218 219 1.287730 GCGGATGCTTCTAGCGATGG 61.288 60.000 0.00 0.00 46.26 3.51
219 220 0.315251 CGGATGCTTCTAGCGATGGA 59.685 55.000 0.00 0.00 46.26 3.41
220 221 1.668337 CGGATGCTTCTAGCGATGGAG 60.668 57.143 0.00 0.00 46.26 3.86
221 222 1.337635 GGATGCTTCTAGCGATGGAGG 60.338 57.143 0.00 0.00 46.26 4.30
222 223 1.615883 GATGCTTCTAGCGATGGAGGA 59.384 52.381 0.00 0.00 46.26 3.71
223 224 1.035923 TGCTTCTAGCGATGGAGGAG 58.964 55.000 0.00 0.00 46.26 3.69
224 225 1.323412 GCTTCTAGCGATGGAGGAGA 58.677 55.000 0.00 0.00 0.00 3.71
225 226 1.683917 GCTTCTAGCGATGGAGGAGAA 59.316 52.381 0.00 0.00 0.00 2.87
226 227 2.298729 GCTTCTAGCGATGGAGGAGAAT 59.701 50.000 0.00 0.00 0.00 2.40
227 228 3.860378 GCTTCTAGCGATGGAGGAGAATG 60.860 52.174 0.00 0.00 0.00 2.67
228 229 3.229697 TCTAGCGATGGAGGAGAATGA 57.770 47.619 0.00 0.00 0.00 2.57
229 230 3.153130 TCTAGCGATGGAGGAGAATGAG 58.847 50.000 0.00 0.00 0.00 2.90
230 231 2.079170 AGCGATGGAGGAGAATGAGA 57.921 50.000 0.00 0.00 0.00 3.27
231 232 2.607499 AGCGATGGAGGAGAATGAGAT 58.393 47.619 0.00 0.00 0.00 2.75
232 233 3.772387 AGCGATGGAGGAGAATGAGATA 58.228 45.455 0.00 0.00 0.00 1.98
233 234 3.509575 AGCGATGGAGGAGAATGAGATAC 59.490 47.826 0.00 0.00 0.00 2.24
234 235 3.256879 GCGATGGAGGAGAATGAGATACA 59.743 47.826 0.00 0.00 0.00 2.29
235 236 4.617995 GCGATGGAGGAGAATGAGATACAG 60.618 50.000 0.00 0.00 0.00 2.74
236 237 4.082300 CGATGGAGGAGAATGAGATACAGG 60.082 50.000 0.00 0.00 0.00 4.00
237 238 4.542906 TGGAGGAGAATGAGATACAGGA 57.457 45.455 0.00 0.00 0.00 3.86
238 239 4.883759 TGGAGGAGAATGAGATACAGGAA 58.116 43.478 0.00 0.00 0.00 3.36
239 240 5.280499 TGGAGGAGAATGAGATACAGGAAA 58.720 41.667 0.00 0.00 0.00 3.13
240 241 5.365025 TGGAGGAGAATGAGATACAGGAAAG 59.635 44.000 0.00 0.00 0.00 2.62
241 242 5.600484 GGAGGAGAATGAGATACAGGAAAGA 59.400 44.000 0.00 0.00 0.00 2.52
242 243 6.239289 GGAGGAGAATGAGATACAGGAAAGAG 60.239 46.154 0.00 0.00 0.00 2.85
243 244 6.439487 AGGAGAATGAGATACAGGAAAGAGA 58.561 40.000 0.00 0.00 0.00 3.10
244 245 6.550854 AGGAGAATGAGATACAGGAAAGAGAG 59.449 42.308 0.00 0.00 0.00 3.20
245 246 6.160576 AGAATGAGATACAGGAAAGAGAGC 57.839 41.667 0.00 0.00 0.00 4.09
246 247 4.582701 ATGAGATACAGGAAAGAGAGCG 57.417 45.455 0.00 0.00 0.00 5.03
247 248 2.099921 TGAGATACAGGAAAGAGAGCGC 59.900 50.000 0.00 0.00 0.00 5.92
248 249 1.410882 AGATACAGGAAAGAGAGCGCC 59.589 52.381 2.29 0.00 0.00 6.53
249 250 0.466124 ATACAGGAAAGAGAGCGCCC 59.534 55.000 2.29 0.00 0.00 6.13
250 251 1.945354 TACAGGAAAGAGAGCGCCCG 61.945 60.000 2.29 0.00 0.00 6.13
251 252 2.997897 AGGAAAGAGAGCGCCCGT 60.998 61.111 2.29 0.00 0.00 5.28
252 253 2.815647 GGAAAGAGAGCGCCCGTG 60.816 66.667 2.29 0.00 0.00 4.94
253 254 2.815647 GAAAGAGAGCGCCCGTGG 60.816 66.667 2.29 0.00 0.00 4.94
254 255 3.591254 GAAAGAGAGCGCCCGTGGT 62.591 63.158 2.29 0.00 0.00 4.16
255 256 3.591254 AAAGAGAGCGCCCGTGGTC 62.591 63.158 2.29 0.00 36.63 4.02
265 266 4.602259 CCGTGGTCGTGTGGCTGT 62.602 66.667 0.00 0.00 35.01 4.40
266 267 3.337889 CGTGGTCGTGTGGCTGTG 61.338 66.667 0.00 0.00 0.00 3.66
267 268 2.108157 GTGGTCGTGTGGCTGTGA 59.892 61.111 0.00 0.00 0.00 3.58
268 269 1.522806 GTGGTCGTGTGGCTGTGAA 60.523 57.895 0.00 0.00 0.00 3.18
269 270 1.227527 TGGTCGTGTGGCTGTGAAG 60.228 57.895 0.00 0.00 0.00 3.02
270 271 1.069090 GGTCGTGTGGCTGTGAAGA 59.931 57.895 0.00 0.00 0.00 2.87
271 272 0.946221 GGTCGTGTGGCTGTGAAGAG 60.946 60.000 0.00 0.00 0.00 2.85
272 273 0.032130 GTCGTGTGGCTGTGAAGAGA 59.968 55.000 0.00 0.00 0.00 3.10
273 274 0.969149 TCGTGTGGCTGTGAAGAGAT 59.031 50.000 0.00 0.00 0.00 2.75
274 275 2.094700 GTCGTGTGGCTGTGAAGAGATA 60.095 50.000 0.00 0.00 0.00 1.98
275 276 2.560981 TCGTGTGGCTGTGAAGAGATAA 59.439 45.455 0.00 0.00 0.00 1.75
276 277 2.926200 CGTGTGGCTGTGAAGAGATAAG 59.074 50.000 0.00 0.00 0.00 1.73
277 278 3.265791 GTGTGGCTGTGAAGAGATAAGG 58.734 50.000 0.00 0.00 0.00 2.69
278 279 2.906389 TGTGGCTGTGAAGAGATAAGGT 59.094 45.455 0.00 0.00 0.00 3.50
279 280 3.265791 GTGGCTGTGAAGAGATAAGGTG 58.734 50.000 0.00 0.00 0.00 4.00
280 281 2.237143 TGGCTGTGAAGAGATAAGGTGG 59.763 50.000 0.00 0.00 0.00 4.61
281 282 2.420687 GGCTGTGAAGAGATAAGGTGGG 60.421 54.545 0.00 0.00 0.00 4.61
282 283 2.501723 GCTGTGAAGAGATAAGGTGGGA 59.498 50.000 0.00 0.00 0.00 4.37
283 284 3.680196 GCTGTGAAGAGATAAGGTGGGAC 60.680 52.174 0.00 0.00 0.00 4.46
284 285 2.496070 TGTGAAGAGATAAGGTGGGACG 59.504 50.000 0.00 0.00 0.00 4.79
285 286 2.758979 GTGAAGAGATAAGGTGGGACGA 59.241 50.000 0.00 0.00 0.00 4.20
286 287 3.024547 TGAAGAGATAAGGTGGGACGAG 58.975 50.000 0.00 0.00 0.00 4.18
287 288 3.288964 GAAGAGATAAGGTGGGACGAGA 58.711 50.000 0.00 0.00 0.00 4.04
288 289 2.938838 AGAGATAAGGTGGGACGAGAG 58.061 52.381 0.00 0.00 0.00 3.20
289 290 2.510382 AGAGATAAGGTGGGACGAGAGA 59.490 50.000 0.00 0.00 0.00 3.10
290 291 2.882137 GAGATAAGGTGGGACGAGAGAG 59.118 54.545 0.00 0.00 0.00 3.20
291 292 2.510382 AGATAAGGTGGGACGAGAGAGA 59.490 50.000 0.00 0.00 0.00 3.10
292 293 2.421751 TAAGGTGGGACGAGAGAGAG 57.578 55.000 0.00 0.00 0.00 3.20
293 294 0.699399 AAGGTGGGACGAGAGAGAGA 59.301 55.000 0.00 0.00 0.00 3.10
294 295 0.923358 AGGTGGGACGAGAGAGAGAT 59.077 55.000 0.00 0.00 0.00 2.75
295 296 1.028905 GGTGGGACGAGAGAGAGATG 58.971 60.000 0.00 0.00 0.00 2.90
296 297 1.683629 GGTGGGACGAGAGAGAGATGT 60.684 57.143 0.00 0.00 0.00 3.06
297 298 1.673920 GTGGGACGAGAGAGAGATGTC 59.326 57.143 0.00 0.00 0.00 3.06
298 299 0.941542 GGGACGAGAGAGAGATGTCG 59.058 60.000 0.00 0.00 41.37 4.35
299 300 0.941542 GGACGAGAGAGAGATGTCGG 59.058 60.000 0.00 0.00 40.04 4.79
300 301 1.658994 GACGAGAGAGAGATGTCGGT 58.341 55.000 0.00 0.00 40.04 4.69
301 302 1.595794 GACGAGAGAGAGATGTCGGTC 59.404 57.143 0.00 0.00 40.04 4.79
302 303 0.941542 CGAGAGAGAGATGTCGGTCC 59.058 60.000 0.00 0.00 32.74 4.46
303 304 1.744114 CGAGAGAGAGATGTCGGTCCA 60.744 57.143 0.00 0.00 32.74 4.02
304 305 1.946768 GAGAGAGAGATGTCGGTCCAG 59.053 57.143 0.00 0.00 0.00 3.86
305 306 1.562008 AGAGAGAGATGTCGGTCCAGA 59.438 52.381 0.00 0.00 0.00 3.86
306 307 1.946768 GAGAGAGATGTCGGTCCAGAG 59.053 57.143 0.00 0.00 0.00 3.35
307 308 1.028905 GAGAGATGTCGGTCCAGAGG 58.971 60.000 0.00 0.00 0.00 3.69
308 309 0.396417 AGAGATGTCGGTCCAGAGGG 60.396 60.000 0.00 0.00 0.00 4.30
309 310 0.395862 GAGATGTCGGTCCAGAGGGA 60.396 60.000 0.00 0.00 42.29 4.20
317 318 2.200370 TCCAGAGGGACACGTGGT 59.800 61.111 21.57 5.35 38.64 4.16
318 319 1.458777 TCCAGAGGGACACGTGGTT 60.459 57.895 21.57 0.00 38.64 3.67
319 320 1.301716 CCAGAGGGACACGTGGTTG 60.302 63.158 21.57 8.16 35.59 3.77
320 321 1.301716 CAGAGGGACACGTGGTTGG 60.302 63.158 21.57 0.00 0.00 3.77
321 322 2.668550 GAGGGACACGTGGTTGGC 60.669 66.667 21.57 2.25 0.00 4.52
322 323 4.619227 AGGGACACGTGGTTGGCG 62.619 66.667 21.57 0.00 0.00 5.69
323 324 4.612412 GGGACACGTGGTTGGCGA 62.612 66.667 21.57 0.00 0.00 5.54
324 325 3.041940 GGACACGTGGTTGGCGAG 61.042 66.667 21.57 0.00 0.00 5.03
325 326 3.712881 GACACGTGGTTGGCGAGC 61.713 66.667 21.57 0.00 0.00 5.03
356 357 1.393539 ACGCGAGTGAAAAATCATCCG 59.606 47.619 15.93 0.00 46.97 4.18
357 358 1.267532 CGCGAGTGAAAAATCATCCGG 60.268 52.381 0.00 0.00 0.00 5.14
358 359 1.737793 GCGAGTGAAAAATCATCCGGT 59.262 47.619 0.00 0.00 0.00 5.28
359 360 2.161609 GCGAGTGAAAAATCATCCGGTT 59.838 45.455 0.00 0.00 0.00 4.44
360 361 3.747193 CGAGTGAAAAATCATCCGGTTG 58.253 45.455 6.15 6.15 0.00 3.77
361 362 3.188460 CGAGTGAAAAATCATCCGGTTGT 59.812 43.478 12.19 0.00 0.00 3.32
362 363 4.320202 CGAGTGAAAAATCATCCGGTTGTT 60.320 41.667 12.19 1.30 0.00 2.83
363 364 5.528870 GAGTGAAAAATCATCCGGTTGTTT 58.471 37.500 12.19 7.62 0.00 2.83
364 365 5.912892 AGTGAAAAATCATCCGGTTGTTTT 58.087 33.333 12.19 12.90 0.00 2.43
365 366 6.345298 AGTGAAAAATCATCCGGTTGTTTTT 58.655 32.000 23.53 23.53 35.42 1.94
366 367 7.493367 AGTGAAAAATCATCCGGTTGTTTTTA 58.507 30.769 24.40 14.27 33.56 1.52
367 368 7.982354 AGTGAAAAATCATCCGGTTGTTTTTAA 59.018 29.630 24.40 18.61 33.56 1.52
368 369 8.769891 GTGAAAAATCATCCGGTTGTTTTTAAT 58.230 29.630 24.40 15.41 33.56 1.40
369 370 8.983724 TGAAAAATCATCCGGTTGTTTTTAATC 58.016 29.630 24.40 20.56 33.56 1.75
370 371 7.575332 AAAATCATCCGGTTGTTTTTAATCG 57.425 32.000 23.50 0.00 34.10 3.34
371 372 5.890424 ATCATCCGGTTGTTTTTAATCGT 57.110 34.783 12.19 0.00 32.49 3.73
372 373 5.692613 TCATCCGGTTGTTTTTAATCGTT 57.307 34.783 12.19 0.00 32.49 3.85
373 374 6.074544 TCATCCGGTTGTTTTTAATCGTTT 57.925 33.333 12.19 0.00 32.49 3.60
374 375 6.505272 TCATCCGGTTGTTTTTAATCGTTTT 58.495 32.000 12.19 0.00 32.49 2.43
375 376 6.637658 TCATCCGGTTGTTTTTAATCGTTTTC 59.362 34.615 12.19 0.00 32.49 2.29
376 377 5.280164 TCCGGTTGTTTTTAATCGTTTTCC 58.720 37.500 0.00 0.00 32.49 3.13
377 378 5.041940 CCGGTTGTTTTTAATCGTTTTCCA 58.958 37.500 0.00 0.00 32.49 3.53
378 379 5.692654 CCGGTTGTTTTTAATCGTTTTCCAT 59.307 36.000 0.00 0.00 32.49 3.41
379 380 6.862090 CCGGTTGTTTTTAATCGTTTTCCATA 59.138 34.615 0.00 0.00 32.49 2.74
380 381 7.381678 CCGGTTGTTTTTAATCGTTTTCCATAA 59.618 33.333 0.00 0.00 32.49 1.90
381 382 8.753175 CGGTTGTTTTTAATCGTTTTCCATAAA 58.247 29.630 0.00 0.00 29.93 1.40
382 383 9.852481 GGTTGTTTTTAATCGTTTTCCATAAAC 57.148 29.630 0.00 0.00 0.00 2.01
400 401 9.733556 TCCATAAACATTATACTCAACACTTGT 57.266 29.630 0.00 0.00 0.00 3.16
401 402 9.773328 CCATAAACATTATACTCAACACTTGTG 57.227 33.333 0.00 0.00 0.00 3.33
406 407 8.407457 ACATTATACTCAACACTTGTGATACG 57.593 34.615 7.83 0.00 0.00 3.06
407 408 8.248253 ACATTATACTCAACACTTGTGATACGA 58.752 33.333 7.83 0.00 0.00 3.43
408 409 8.746751 CATTATACTCAACACTTGTGATACGAG 58.253 37.037 7.83 9.09 35.70 4.18
409 410 3.318017 ACTCAACACTTGTGATACGAGC 58.682 45.455 7.83 0.00 32.76 5.03
410 411 3.243737 ACTCAACACTTGTGATACGAGCA 60.244 43.478 7.83 0.00 32.76 4.26
411 412 3.723260 TCAACACTTGTGATACGAGCAA 58.277 40.909 7.83 0.00 32.76 3.91
412 413 3.740832 TCAACACTTGTGATACGAGCAAG 59.259 43.478 7.83 0.00 43.56 4.01
413 414 3.660501 ACACTTGTGATACGAGCAAGA 57.339 42.857 7.83 0.00 41.31 3.02
414 415 3.579709 ACACTTGTGATACGAGCAAGAG 58.420 45.455 7.83 5.23 41.31 2.85
415 416 2.346847 CACTTGTGATACGAGCAAGAGC 59.653 50.000 10.01 0.00 41.31 4.09
416 417 1.929836 CTTGTGATACGAGCAAGAGCC 59.070 52.381 0.00 0.00 43.56 4.70
417 418 0.175760 TGTGATACGAGCAAGAGCCC 59.824 55.000 0.00 0.00 43.56 5.19
418 419 0.461961 GTGATACGAGCAAGAGCCCT 59.538 55.000 0.00 0.00 43.56 5.19
419 420 0.461548 TGATACGAGCAAGAGCCCTG 59.538 55.000 0.00 0.00 43.56 4.45
420 421 0.461961 GATACGAGCAAGAGCCCTGT 59.538 55.000 0.00 0.00 43.56 4.00
421 422 1.681793 GATACGAGCAAGAGCCCTGTA 59.318 52.381 0.00 0.00 43.56 2.74
422 423 1.776662 TACGAGCAAGAGCCCTGTAT 58.223 50.000 0.00 0.00 43.56 2.29
423 424 1.776662 ACGAGCAAGAGCCCTGTATA 58.223 50.000 0.00 0.00 43.56 1.47
424 425 1.409427 ACGAGCAAGAGCCCTGTATAC 59.591 52.381 0.00 0.00 43.56 1.47
425 426 1.600663 CGAGCAAGAGCCCTGTATACG 60.601 57.143 0.00 0.00 43.56 3.06
426 427 1.409427 GAGCAAGAGCCCTGTATACGT 59.591 52.381 0.00 0.00 43.56 3.57
427 428 2.621998 GAGCAAGAGCCCTGTATACGTA 59.378 50.000 0.00 0.00 43.56 3.57
428 429 3.028850 AGCAAGAGCCCTGTATACGTAA 58.971 45.455 0.00 0.00 43.56 3.18
429 430 3.641906 AGCAAGAGCCCTGTATACGTAAT 59.358 43.478 0.00 0.00 43.56 1.89
430 431 4.101119 AGCAAGAGCCCTGTATACGTAATT 59.899 41.667 0.00 0.00 43.56 1.40
431 432 4.814771 GCAAGAGCCCTGTATACGTAATTT 59.185 41.667 0.00 0.00 33.58 1.82
432 433 5.050295 GCAAGAGCCCTGTATACGTAATTTC 60.050 44.000 0.00 0.00 33.58 2.17
433 434 6.281405 CAAGAGCCCTGTATACGTAATTTCT 58.719 40.000 0.00 0.00 0.00 2.52
434 435 6.481434 AGAGCCCTGTATACGTAATTTCTT 57.519 37.500 0.00 0.00 0.00 2.52
454 455 7.773864 TTCTTTTATGACGACACAACTACAA 57.226 32.000 0.00 0.00 0.00 2.41
468 469 8.370493 ACACAACTACAATGATGCTGATATAC 57.630 34.615 0.00 0.00 0.00 1.47
477 478 8.360390 ACAATGATGCTGATATACTTTACTCGA 58.640 33.333 0.00 0.00 0.00 4.04
478 479 9.363763 CAATGATGCTGATATACTTTACTCGAT 57.636 33.333 0.00 0.00 0.00 3.59
588 807 5.064707 TCTCCAAGAAACAAACAACGAGAAG 59.935 40.000 0.00 0.00 0.00 2.85
659 878 7.213678 AGTCAAAACTTGTTGGAAAAGTCAAA 58.786 30.769 0.00 0.00 36.87 2.69
663 882 8.382875 CAAAACTTGTTGGAAAAGTCAAAGATC 58.617 33.333 0.00 0.00 36.87 2.75
1190 1443 6.612306 GTTGGATCAAACCTTACTGATGTTC 58.388 40.000 1.00 0.00 32.40 3.18
1197 1450 8.918202 TCAAACCTTACTGATGTTCTATTTGT 57.082 30.769 0.00 0.00 0.00 2.83
1770 2023 1.140852 CTGTTGTTCTCACCCCTCACA 59.859 52.381 0.00 0.00 0.00 3.58
1839 2092 0.392595 CGCCAAGGTAACCCTCTTCC 60.393 60.000 0.00 0.00 41.56 3.46
2193 2446 6.339587 TCACCAATTTCTGATACCAAAACC 57.660 37.500 0.00 0.00 0.00 3.27
2386 2641 6.777580 AGAATCTCTCTCTCCTTGTATTCTCC 59.222 42.308 0.00 0.00 28.85 3.71
2712 3393 9.142515 CATGTTTGTTTGCATATCATACTTTGT 57.857 29.630 0.00 0.00 0.00 2.83
2713 3394 9.709495 ATGTTTGTTTGCATATCATACTTTGTT 57.291 25.926 0.00 0.00 0.00 2.83
2925 3675 7.014615 AGTCATTTAACATTCCTGAGCAACTTT 59.985 33.333 0.00 0.00 0.00 2.66
2952 3702 7.743116 TTTGATTACCACCTATTGACTCCTA 57.257 36.000 0.00 0.00 0.00 2.94
3061 3816 2.383855 TCCACCTGAAAAGGTTGGTTG 58.616 47.619 0.00 0.00 40.85 3.77
3242 4004 6.187682 AGTTGTGGAGAAAAGGAAAGAAGAA 58.812 36.000 0.00 0.00 0.00 2.52
3244 4006 5.133221 TGTGGAGAAAAGGAAAGAAGAAGG 58.867 41.667 0.00 0.00 0.00 3.46
3276 4038 4.472833 AGATAAGCCACAAAGGATCAGACT 59.527 41.667 0.00 0.00 41.22 3.24
3381 4191 0.447801 GCCAAGTATTGTGAGTGCCG 59.552 55.000 0.00 0.00 46.99 5.69
4044 5033 2.817258 CCCCTAAATGCGTTCTCAACAA 59.183 45.455 0.00 0.00 0.00 2.83
4045 5034 3.119849 CCCCTAAATGCGTTCTCAACAAG 60.120 47.826 0.00 0.00 0.00 3.16
4046 5035 3.502211 CCCTAAATGCGTTCTCAACAAGT 59.498 43.478 0.00 0.00 0.00 3.16
4047 5036 4.693566 CCCTAAATGCGTTCTCAACAAGTA 59.306 41.667 0.00 0.00 0.00 2.24
4048 5037 5.390567 CCCTAAATGCGTTCTCAACAAGTAC 60.391 44.000 0.00 0.00 0.00 2.73
4049 5038 5.408604 CCTAAATGCGTTCTCAACAAGTACT 59.591 40.000 0.00 0.00 0.00 2.73
4050 5039 4.992381 AATGCGTTCTCAACAAGTACTC 57.008 40.909 0.00 0.00 0.00 2.59
4051 5040 2.750948 TGCGTTCTCAACAAGTACTCC 58.249 47.619 0.00 0.00 0.00 3.85
4052 5041 2.067013 GCGTTCTCAACAAGTACTCCC 58.933 52.381 0.00 0.00 0.00 4.30
4053 5042 2.288886 GCGTTCTCAACAAGTACTCCCT 60.289 50.000 0.00 0.00 0.00 4.20
4054 5043 3.576648 CGTTCTCAACAAGTACTCCCTC 58.423 50.000 0.00 0.00 0.00 4.30
4055 5044 3.614390 CGTTCTCAACAAGTACTCCCTCC 60.614 52.174 0.00 0.00 0.00 4.30
4056 5045 2.168496 TCTCAACAAGTACTCCCTCCG 58.832 52.381 0.00 0.00 0.00 4.63
4057 5046 1.893801 CTCAACAAGTACTCCCTCCGT 59.106 52.381 0.00 0.00 0.00 4.69
4058 5047 1.891150 TCAACAAGTACTCCCTCCGTC 59.109 52.381 0.00 0.00 0.00 4.79
4059 5048 1.067071 CAACAAGTACTCCCTCCGTCC 60.067 57.143 0.00 0.00 0.00 4.79
4060 5049 0.614134 ACAAGTACTCCCTCCGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
4061 5050 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
4062 5051 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
4063 5052 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4064 5053 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4065 5054 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4066 5055 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4067 5056 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4068 5057 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4069 5058 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4070 5059 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4071 5060 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4072 5061 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4073 5062 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4074 5063 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4075 5064 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4076 5065 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4077 5066 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4078 5067 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4079 5068 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4080 5069 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4081 5070 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4082 5071 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4083 5072 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4084 5073 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4092 5081 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
4093 5082 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
4094 5083 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
4095 5084 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
4096 5085 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
4097 5086 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
4114 5103 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
4115 5104 8.408601 ACGGATGTATCTAATACTAAAACGTGT 58.591 33.333 0.00 0.00 36.70 4.49
4116 5105 8.899776 CGGATGTATCTAATACTAAAACGTGTC 58.100 37.037 0.00 0.00 36.70 3.67
4117 5106 9.962783 GGATGTATCTAATACTAAAACGTGTCT 57.037 33.333 0.00 0.00 36.70 3.41
4127 5116 6.963049 ACTAAAACGTGTCTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
4128 5117 4.921470 AAAACGTGTCTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
4129 5118 3.587797 AACGTGTCTTGATACATCCGT 57.412 42.857 0.00 0.00 34.68 4.69
4130 5119 4.707030 AACGTGTCTTGATACATCCGTA 57.293 40.909 0.00 0.00 32.82 4.02
4131 5120 4.913335 ACGTGTCTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
4132 5121 5.258456 ACGTGTCTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
4133 5122 5.657474 ACGTGTCTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
4134 5123 6.798482 ACGTGTCTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
4135 5124 6.916387 ACGTGTCTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
4136 5125 7.136772 CGTGTCTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
4137 5126 7.113124 CGTGTCTTGATACATCCGTATTTAGAC 59.887 40.741 14.63 14.63 42.28 2.59
4138 5127 7.919091 GTGTCTTGATACATCCGTATTTAGACA 59.081 37.037 17.56 17.56 45.11 3.41
4139 5128 8.471609 TGTCTTGATACATCCGTATTTAGACAA 58.528 33.333 18.39 6.16 44.80 3.18
4140 5129 9.309516 GTCTTGATACATCCGTATTTAGACAAA 57.690 33.333 15.66 0.00 41.97 2.83
4160 5149 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
4161 5150 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
4162 5151 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
4163 5152 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
4164 5153 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
4165 5154 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4166 5155 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4167 5156 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4168 5157 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4279 5271 2.092429 TGTTTCACAGGCTGAGAAGGTT 60.092 45.455 23.66 0.00 29.26 3.50
4375 5367 2.346803 TCCTCTGCAGTGCGTATTTTC 58.653 47.619 14.67 0.00 0.00 2.29
4452 5446 9.045223 TGTCTTCCATTGATTTAATATCAGACG 57.955 33.333 0.00 0.00 33.67 4.18
4488 5483 9.529325 GGGTTTATAAGTCTGAAATAATTTGCC 57.471 33.333 0.00 0.00 0.00 4.52
4851 5871 3.490155 CAGAACTAGCATGCTGATCTTCG 59.510 47.826 30.42 14.24 0.00 3.79
5000 6048 3.134458 GGGCACTTCATTTCTAGATCCG 58.866 50.000 0.00 0.00 0.00 4.18
5096 6145 2.867975 CGTTTCAGTTTACAAGGGACGT 59.132 45.455 0.00 0.00 0.00 4.34
5111 6160 6.154706 ACAAGGGACGTCTGTATTTCTAGATT 59.845 38.462 16.46 0.00 0.00 2.40
5416 6634 7.441836 TGATAAGAAACAGTAAGCTTCTGTGA 58.558 34.615 23.40 12.45 44.03 3.58
5430 6648 4.023365 GCTTCTGTGATTGGCTCATATTCC 60.023 45.833 0.00 0.00 35.97 3.01
5657 6895 3.686016 GCCCTTGTTCTGGACATAAAGA 58.314 45.455 0.00 0.00 38.26 2.52
5750 7005 4.036852 GCCAGTGAACTTATTAATCCTGCC 59.963 45.833 0.00 0.00 0.00 4.85
5759 7014 7.497773 ACTTATTAATCCTGCCTATAGGGTC 57.502 40.000 20.58 5.21 38.42 4.46
5841 7099 1.676006 AGCTTGTCCCAAACTTGTTCG 59.324 47.619 0.00 0.00 0.00 3.95
5849 7130 2.420022 CCCAAACTTGTTCGGATGCTAG 59.580 50.000 0.00 0.00 0.00 3.42
5881 7162 0.036306 GAGGGACAAGCTTTTCCGGA 59.964 55.000 22.30 0.00 32.00 5.14
5882 7163 0.698818 AGGGACAAGCTTTTCCGGAT 59.301 50.000 22.30 10.38 32.00 4.18
6020 7366 5.005740 TGATGTTTGGAGGTCTTTCATCTG 58.994 41.667 0.00 0.00 33.67 2.90
6074 7420 6.590656 ATTCCTTGATATGGACCCAACTAA 57.409 37.500 0.00 0.00 32.65 2.24
6126 7472 3.327757 ACTGACATTGTTTCTCTGCCCTA 59.672 43.478 0.00 0.00 0.00 3.53
6293 7639 4.504858 CTGGACGACTAGGCAAAATTAGT 58.495 43.478 0.00 0.00 33.00 2.24
6426 7772 1.219522 GGATCCGCGGTTACCATTCG 61.220 60.000 27.15 1.44 0.00 3.34
6471 7817 7.675161 TGGATATGTCCTCAGATTTTACTGA 57.325 36.000 10.16 0.00 45.32 3.41
6571 8036 8.861086 GTCAGTTGGAGAATTCTGGTATATAGA 58.139 37.037 14.00 0.00 0.00 1.98
6572 8037 9.607333 TCAGTTGGAGAATTCTGGTATATAGAT 57.393 33.333 14.00 0.00 0.00 1.98
6697 10087 1.594293 CTGTTCTGGTGGCGACGTT 60.594 57.895 0.00 0.00 0.00 3.99
6698 10088 1.153329 TGTTCTGGTGGCGACGTTT 60.153 52.632 0.00 0.00 0.00 3.60
6699 10089 0.104487 TGTTCTGGTGGCGACGTTTA 59.896 50.000 0.00 0.00 0.00 2.01
6700 10090 0.788391 GTTCTGGTGGCGACGTTTAG 59.212 55.000 0.00 0.00 0.00 1.85
6701 10091 0.320073 TTCTGGTGGCGACGTTTAGG 60.320 55.000 0.00 0.00 0.00 2.69
6702 10092 1.740296 CTGGTGGCGACGTTTAGGG 60.740 63.158 0.00 0.00 0.00 3.53
6703 10093 3.122971 GGTGGCGACGTTTAGGGC 61.123 66.667 0.00 0.00 0.00 5.19
6704 10094 2.357760 GTGGCGACGTTTAGGGCA 60.358 61.111 0.00 0.00 0.00 5.36
6705 10095 1.743995 GTGGCGACGTTTAGGGCAT 60.744 57.895 8.77 0.00 38.55 4.40
6706 10096 1.743623 TGGCGACGTTTAGGGCATG 60.744 57.895 0.00 0.00 0.00 4.06
6707 10097 1.743995 GGCGACGTTTAGGGCATGT 60.744 57.895 0.00 0.00 0.00 3.21
6708 10098 0.460635 GGCGACGTTTAGGGCATGTA 60.461 55.000 0.00 0.00 0.00 2.29
6709 10099 0.648958 GCGACGTTTAGGGCATGTAC 59.351 55.000 0.00 0.00 0.00 2.90
6710 10100 1.999048 CGACGTTTAGGGCATGTACA 58.001 50.000 0.00 0.00 0.00 2.90
6711 10101 2.339418 CGACGTTTAGGGCATGTACAA 58.661 47.619 0.00 0.00 0.00 2.41
6712 10102 2.933906 CGACGTTTAGGGCATGTACAAT 59.066 45.455 0.00 0.00 0.00 2.71
6713 10103 3.242284 CGACGTTTAGGGCATGTACAATG 60.242 47.826 0.00 0.12 0.00 2.82
6714 10104 3.013921 ACGTTTAGGGCATGTACAATGG 58.986 45.455 0.00 0.00 0.00 3.16
6715 10105 3.013921 CGTTTAGGGCATGTACAATGGT 58.986 45.455 0.00 0.00 0.00 3.55
6716 10106 3.442273 CGTTTAGGGCATGTACAATGGTT 59.558 43.478 0.00 0.00 0.00 3.67
6717 10107 4.674101 CGTTTAGGGCATGTACAATGGTTG 60.674 45.833 0.00 0.00 0.00 3.77
6718 10108 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
6719 10109 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
6720 10110 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
6721 10111 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
6722 10112 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
6723 10113 4.037923 GGGCATGTACAATGGTTGATAAGG 59.962 45.833 0.00 0.00 0.00 2.69
6724 10114 4.644685 GGCATGTACAATGGTTGATAAGGT 59.355 41.667 0.00 0.00 0.00 3.50
6725 10115 5.825679 GGCATGTACAATGGTTGATAAGGTA 59.174 40.000 0.00 0.00 0.00 3.08
6726 10116 6.017109 GGCATGTACAATGGTTGATAAGGTAG 60.017 42.308 0.00 0.00 0.00 3.18
6727 10117 6.542370 GCATGTACAATGGTTGATAAGGTAGT 59.458 38.462 0.00 0.00 0.00 2.73
6728 10118 7.254795 GCATGTACAATGGTTGATAAGGTAGTC 60.255 40.741 0.00 0.00 0.00 2.59
6729 10119 7.490657 TGTACAATGGTTGATAAGGTAGTCT 57.509 36.000 0.00 0.00 0.00 3.24
6730 10120 7.913789 TGTACAATGGTTGATAAGGTAGTCTT 58.086 34.615 0.00 0.00 39.40 3.01
6731 10121 9.038072 TGTACAATGGTTGATAAGGTAGTCTTA 57.962 33.333 0.00 0.00 41.66 2.10
6745 10135 7.676683 AGGTAGTCTTATCTTAAATCCTGCA 57.323 36.000 0.00 0.00 0.00 4.41
6746 10136 8.268878 AGGTAGTCTTATCTTAAATCCTGCAT 57.731 34.615 0.00 0.00 0.00 3.96
6747 10137 8.153550 AGGTAGTCTTATCTTAAATCCTGCATG 58.846 37.037 0.00 0.00 0.00 4.06
6748 10138 7.934120 GGTAGTCTTATCTTAAATCCTGCATGT 59.066 37.037 0.00 0.00 0.00 3.21
6749 10139 9.982651 GTAGTCTTATCTTAAATCCTGCATGTA 57.017 33.333 0.00 0.00 0.00 2.29
6761 10151 8.721019 AAATCCTGCATGTAATTTTACAATGG 57.279 30.769 7.20 7.37 45.74 3.16
6762 10152 6.849085 TCCTGCATGTAATTTTACAATGGT 57.151 33.333 7.20 0.00 45.74 3.55
6763 10153 7.238486 TCCTGCATGTAATTTTACAATGGTT 57.762 32.000 7.20 0.00 45.74 3.67
6764 10154 7.095910 TCCTGCATGTAATTTTACAATGGTTG 58.904 34.615 7.20 2.76 45.74 3.77
6765 10155 7.039434 TCCTGCATGTAATTTTACAATGGTTGA 60.039 33.333 7.20 0.00 45.74 3.18
6766 10156 7.765360 CCTGCATGTAATTTTACAATGGTTGAT 59.235 33.333 7.20 0.00 45.74 2.57
6767 10157 9.800433 CTGCATGTAATTTTACAATGGTTGATA 57.200 29.630 7.20 0.00 45.74 2.15
6776 10166 9.975218 ATTTTACAATGGTTGATAAGGTAGTCT 57.025 29.630 0.00 0.00 0.00 3.24
6777 10167 9.802039 TTTTACAATGGTTGATAAGGTAGTCTT 57.198 29.630 0.00 0.00 39.40 3.01
6792 10182 7.676683 AGGTAGTCTTATCTTAAATCCTGCA 57.323 36.000 0.00 0.00 0.00 4.41
6793 10183 8.268878 AGGTAGTCTTATCTTAAATCCTGCAT 57.731 34.615 0.00 0.00 0.00 3.96
6794 10184 8.153550 AGGTAGTCTTATCTTAAATCCTGCATG 58.846 37.037 0.00 0.00 0.00 4.06
6795 10185 7.934120 GGTAGTCTTATCTTAAATCCTGCATGT 59.066 37.037 0.00 0.00 0.00 3.21
6796 10186 9.982651 GTAGTCTTATCTTAAATCCTGCATGTA 57.017 33.333 0.00 0.00 0.00 2.29
6810 10200 9.797642 AATCCTGCATGTAATTTAGATATGACA 57.202 29.630 0.00 0.00 0.00 3.58
6811 10201 9.797642 ATCCTGCATGTAATTTAGATATGACAA 57.202 29.630 0.00 0.00 0.00 3.18
6812 10202 9.625747 TCCTGCATGTAATTTAGATATGACAAA 57.374 29.630 0.00 0.00 0.00 2.83
6880 10270 7.974482 AACTAGCTATTCTTAAAAACGTGGT 57.026 32.000 0.00 0.00 0.00 4.16
6881 10271 7.360575 ACTAGCTATTCTTAAAAACGTGGTG 57.639 36.000 0.00 0.00 0.00 4.17
6882 10272 7.156673 ACTAGCTATTCTTAAAAACGTGGTGA 58.843 34.615 0.00 0.00 0.00 4.02
6883 10273 6.237313 AGCTATTCTTAAAAACGTGGTGAC 57.763 37.500 0.00 0.00 0.00 3.67
6884 10274 5.761234 AGCTATTCTTAAAAACGTGGTGACA 59.239 36.000 0.00 0.00 38.70 3.58
6908 10298 8.604640 CACATATTGTGCTAAGAGATCATCTT 57.395 34.615 10.82 10.82 44.98 2.40
6909 10299 9.053840 CACATATTGTGCTAAGAGATCATCTTT 57.946 33.333 11.16 0.00 42.57 2.52
6910 10300 9.624373 ACATATTGTGCTAAGAGATCATCTTTT 57.376 29.630 11.16 0.00 46.49 2.27
6911 10301 9.880064 CATATTGTGCTAAGAGATCATCTTTTG 57.120 33.333 11.16 7.50 46.49 2.44
6912 10302 5.808042 TGTGCTAAGAGATCATCTTTTGC 57.192 39.130 11.16 14.19 46.49 3.68
6913 10303 4.637534 TGTGCTAAGAGATCATCTTTTGCC 59.362 41.667 11.16 10.40 46.49 4.52
6914 10304 4.880696 GTGCTAAGAGATCATCTTTTGCCT 59.119 41.667 11.16 0.00 46.49 4.75
6915 10305 5.356470 GTGCTAAGAGATCATCTTTTGCCTT 59.644 40.000 11.16 0.00 46.49 4.35
6916 10306 5.587844 TGCTAAGAGATCATCTTTTGCCTTC 59.412 40.000 11.16 0.00 46.49 3.46
6917 10307 5.821995 GCTAAGAGATCATCTTTTGCCTTCT 59.178 40.000 11.16 0.00 46.49 2.85
6918 10308 6.018016 GCTAAGAGATCATCTTTTGCCTTCTC 60.018 42.308 11.16 0.00 46.49 2.87
6919 10309 5.697082 AGAGATCATCTTTTGCCTTCTCT 57.303 39.130 0.00 0.00 32.99 3.10
6920 10310 6.064735 AGAGATCATCTTTTGCCTTCTCTT 57.935 37.500 0.00 0.00 34.77 2.85
6921 10311 7.192852 AGAGATCATCTTTTGCCTTCTCTTA 57.807 36.000 0.00 0.00 34.77 2.10
6922 10312 7.628234 AGAGATCATCTTTTGCCTTCTCTTAA 58.372 34.615 0.00 0.00 34.77 1.85
6923 10313 8.105829 AGAGATCATCTTTTGCCTTCTCTTAAA 58.894 33.333 0.00 0.00 34.77 1.52
6924 10314 8.820153 AGATCATCTTTTGCCTTCTCTTAAAT 57.180 30.769 0.00 0.00 0.00 1.40
6925 10315 9.911788 AGATCATCTTTTGCCTTCTCTTAAATA 57.088 29.630 0.00 0.00 0.00 1.40
6928 10318 9.739276 TCATCTTTTGCCTTCTCTTAAATAAGA 57.261 29.630 3.08 3.08 39.82 2.10
6950 10340 8.744568 AAGAGAAGACAATCTTATGATTTCCC 57.255 34.615 1.22 0.00 40.61 3.97
7190 10586 8.472007 TGGCAAAATCTAAGGAAAACTCTTAA 57.528 30.769 0.00 0.00 0.00 1.85
7199 10595 9.635404 TCTAAGGAAAACTCTTAAATTCAACCA 57.365 29.630 0.00 0.00 0.00 3.67
7218 10614 1.471684 CAGACTGATTTCTTGCTGGCC 59.528 52.381 0.00 0.00 0.00 5.36
7219 10615 1.353694 AGACTGATTTCTTGCTGGCCT 59.646 47.619 3.32 0.00 0.00 5.19
7220 10616 2.573462 AGACTGATTTCTTGCTGGCCTA 59.427 45.455 3.32 0.00 0.00 3.93
7221 10617 3.201708 AGACTGATTTCTTGCTGGCCTAT 59.798 43.478 3.32 0.00 0.00 2.57
7223 10619 4.455606 ACTGATTTCTTGCTGGCCTATAC 58.544 43.478 3.32 0.00 0.00 1.47
7224 10620 4.164988 ACTGATTTCTTGCTGGCCTATACT 59.835 41.667 3.32 0.00 0.00 2.12
7225 10621 5.366768 ACTGATTTCTTGCTGGCCTATACTA 59.633 40.000 3.32 0.00 0.00 1.82
7226 10622 6.126768 ACTGATTTCTTGCTGGCCTATACTAA 60.127 38.462 3.32 0.00 0.00 2.24
7228 10624 3.728076 TCTTGCTGGCCTATACTAACG 57.272 47.619 3.32 0.00 0.00 3.18
7229 10625 3.293337 TCTTGCTGGCCTATACTAACGA 58.707 45.455 3.32 0.00 0.00 3.85
7230 10626 3.702548 TCTTGCTGGCCTATACTAACGAA 59.297 43.478 3.32 0.00 0.00 3.85
7231 10627 3.728076 TGCTGGCCTATACTAACGAAG 57.272 47.619 3.32 0.00 0.00 3.79
7232 10628 3.293337 TGCTGGCCTATACTAACGAAGA 58.707 45.455 3.32 0.00 0.00 2.87
7234 10630 3.857756 GCTGGCCTATACTAACGAAGAGC 60.858 52.174 3.32 0.00 0.00 4.09
7235 10631 2.626743 TGGCCTATACTAACGAAGAGCC 59.373 50.000 3.32 0.00 38.37 4.70
7237 10633 2.351544 GCCTATACTAACGAAGAGCCCG 60.352 54.545 0.00 0.00 0.00 6.13
7238 10634 2.351544 CCTATACTAACGAAGAGCCCGC 60.352 54.545 0.00 0.00 0.00 6.13
7241 10637 0.108756 ACTAACGAAGAGCCCGCTTC 60.109 55.000 0.00 2.21 40.62 3.86
7243 10639 0.172803 TAACGAAGAGCCCGCTTCTC 59.827 55.000 9.50 0.00 41.60 2.87
7245 10641 0.680280 ACGAAGAGCCCGCTTCTCTA 60.680 55.000 9.50 0.00 41.60 2.43
7246 10642 0.671251 CGAAGAGCCCGCTTCTCTAT 59.329 55.000 9.50 0.00 41.60 1.98
7247 10643 1.067821 CGAAGAGCCCGCTTCTCTATT 59.932 52.381 9.50 0.00 41.60 1.73
7248 10644 2.749776 GAAGAGCCCGCTTCTCTATTC 58.250 52.381 4.78 0.00 39.81 1.75
7249 10645 2.080654 AGAGCCCGCTTCTCTATTCT 57.919 50.000 0.00 0.00 39.00 2.40
7250 10646 1.960689 AGAGCCCGCTTCTCTATTCTC 59.039 52.381 0.00 0.00 39.00 2.87
7251 10647 1.960689 GAGCCCGCTTCTCTATTCTCT 59.039 52.381 0.00 0.00 0.00 3.10
7252 10648 1.960689 AGCCCGCTTCTCTATTCTCTC 59.039 52.381 0.00 0.00 0.00 3.20
7253 10649 1.000394 GCCCGCTTCTCTATTCTCTCC 60.000 57.143 0.00 0.00 0.00 3.71
7254 10650 2.593026 CCCGCTTCTCTATTCTCTCCT 58.407 52.381 0.00 0.00 0.00 3.69
7255 10651 2.556622 CCCGCTTCTCTATTCTCTCCTC 59.443 54.545 0.00 0.00 0.00 3.71
7256 10652 3.486383 CCGCTTCTCTATTCTCTCCTCT 58.514 50.000 0.00 0.00 0.00 3.69
7257 10653 3.888930 CCGCTTCTCTATTCTCTCCTCTT 59.111 47.826 0.00 0.00 0.00 2.85
7258 10654 4.023193 CCGCTTCTCTATTCTCTCCTCTTC 60.023 50.000 0.00 0.00 0.00 2.87
7260 10656 5.049405 CGCTTCTCTATTCTCTCCTCTTCTC 60.049 48.000 0.00 0.00 0.00 2.87
7261 10657 5.827797 GCTTCTCTATTCTCTCCTCTTCTCA 59.172 44.000 0.00 0.00 0.00 3.27
7263 10659 7.014615 GCTTCTCTATTCTCTCCTCTTCTCATT 59.985 40.741 0.00 0.00 0.00 2.57
7264 10660 7.822161 TCTCTATTCTCTCCTCTTCTCATTG 57.178 40.000 0.00 0.00 0.00 2.82
7265 10661 6.265196 TCTCTATTCTCTCCTCTTCTCATTGC 59.735 42.308 0.00 0.00 0.00 3.56
7266 10662 6.135454 TCTATTCTCTCCTCTTCTCATTGCT 58.865 40.000 0.00 0.00 0.00 3.91
7268 10664 3.030291 TCTCTCCTCTTCTCATTGCTCC 58.970 50.000 0.00 0.00 0.00 4.70
7271 10667 3.055530 TCTCCTCTTCTCATTGCTCCAAC 60.056 47.826 0.00 0.00 0.00 3.77
7272 10668 2.909006 TCCTCTTCTCATTGCTCCAACT 59.091 45.455 0.00 0.00 0.00 3.16
7274 10670 4.532126 TCCTCTTCTCATTGCTCCAACTAA 59.468 41.667 0.00 0.00 0.00 2.24
7275 10671 4.874966 CCTCTTCTCATTGCTCCAACTAAG 59.125 45.833 0.00 0.00 0.00 2.18
7276 10672 4.256920 TCTTCTCATTGCTCCAACTAAGC 58.743 43.478 0.00 0.00 40.26 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.676121 TTTCTGCCATGGCCACCG 60.676 61.111 33.44 18.55 41.09 4.94
41 42 1.187567 AACTTTCTGCCATGGCCACC 61.188 55.000 33.44 7.24 41.09 4.61
42 43 0.037975 CAACTTTCTGCCATGGCCAC 60.038 55.000 33.44 7.65 41.09 5.01
43 44 1.818959 GCAACTTTCTGCCATGGCCA 61.819 55.000 33.44 19.88 41.09 5.36
44 45 1.079612 GCAACTTTCTGCCATGGCC 60.080 57.895 33.44 16.23 41.09 5.36
45 46 1.444895 CGCAACTTTCTGCCATGGC 60.445 57.895 30.54 30.54 39.26 4.40
46 47 0.109597 GTCGCAACTTTCTGCCATGG 60.110 55.000 7.63 7.63 39.26 3.66
47 48 0.877071 AGTCGCAACTTTCTGCCATG 59.123 50.000 0.00 0.00 39.26 3.66
48 49 1.160137 GAGTCGCAACTTTCTGCCAT 58.840 50.000 0.00 0.00 39.26 4.40
49 50 0.884704 GGAGTCGCAACTTTCTGCCA 60.885 55.000 0.00 0.00 39.26 4.92
50 51 1.869690 GGAGTCGCAACTTTCTGCC 59.130 57.895 0.00 0.00 39.26 4.85
51 52 0.944311 TCGGAGTCGCAACTTTCTGC 60.944 55.000 0.00 0.00 35.28 4.26
52 53 0.784778 GTCGGAGTCGCAACTTTCTG 59.215 55.000 0.00 0.00 35.28 3.02
53 54 0.663568 CGTCGGAGTCGCAACTTTCT 60.664 55.000 0.00 0.00 35.28 2.52
54 55 1.615107 CCGTCGGAGTCGCAACTTTC 61.615 60.000 4.91 0.00 37.81 2.62
55 56 1.663702 CCGTCGGAGTCGCAACTTT 60.664 57.895 4.91 0.00 37.81 2.66
56 57 2.049433 CCGTCGGAGTCGCAACTT 60.049 61.111 4.91 0.00 37.81 2.66
57 58 3.292936 ACCGTCGGAGTCGCAACT 61.293 61.111 20.51 0.00 37.81 3.16
58 59 3.103911 CACCGTCGGAGTCGCAAC 61.104 66.667 20.51 0.00 37.81 4.17
59 60 4.351938 CCACCGTCGGAGTCGCAA 62.352 66.667 20.51 0.00 37.81 4.85
61 62 1.996786 TATTCCACCGTCGGAGTCGC 61.997 60.000 20.51 0.00 37.81 5.19
62 63 0.666913 ATATTCCACCGTCGGAGTCG 59.333 55.000 20.51 3.01 36.12 4.18
63 64 2.350197 CGTATATTCCACCGTCGGAGTC 60.350 54.545 20.51 0.00 36.12 3.36
64 65 1.605710 CGTATATTCCACCGTCGGAGT 59.394 52.381 20.51 0.00 36.12 3.85
65 66 1.875514 TCGTATATTCCACCGTCGGAG 59.124 52.381 20.51 10.53 36.12 4.63
66 67 1.965935 TCGTATATTCCACCGTCGGA 58.034 50.000 20.51 0.00 0.00 4.55
67 68 2.592194 CATCGTATATTCCACCGTCGG 58.408 52.381 10.48 10.48 0.00 4.79
68 69 1.983605 GCATCGTATATTCCACCGTCG 59.016 52.381 0.00 0.00 0.00 5.12
69 70 2.987149 CTGCATCGTATATTCCACCGTC 59.013 50.000 0.00 0.00 0.00 4.79
70 71 2.866460 GCTGCATCGTATATTCCACCGT 60.866 50.000 0.00 0.00 0.00 4.83
71 72 1.726791 GCTGCATCGTATATTCCACCG 59.273 52.381 0.00 0.00 0.00 4.94
72 73 1.726791 CGCTGCATCGTATATTCCACC 59.273 52.381 0.88 0.00 0.00 4.61
73 74 1.126846 GCGCTGCATCGTATATTCCAC 59.873 52.381 12.03 0.00 0.00 4.02
74 75 1.428448 GCGCTGCATCGTATATTCCA 58.572 50.000 12.03 0.00 0.00 3.53
75 76 0.366871 CGCGCTGCATCGTATATTCC 59.633 55.000 12.03 0.00 0.00 3.01
76 77 0.366871 CCGCGCTGCATCGTATATTC 59.633 55.000 12.03 0.00 0.00 1.75
77 78 1.014044 CCCGCGCTGCATCGTATATT 61.014 55.000 12.03 0.00 0.00 1.28
78 79 1.446099 CCCGCGCTGCATCGTATAT 60.446 57.895 12.03 0.00 0.00 0.86
79 80 2.049526 CCCGCGCTGCATCGTATA 60.050 61.111 12.03 0.00 0.00 1.47
80 81 4.969196 CCCCGCGCTGCATCGTAT 62.969 66.667 12.03 0.00 0.00 3.06
84 85 4.314440 TATCCCCCGCGCTGCATC 62.314 66.667 5.56 0.00 0.00 3.91
85 86 4.626081 GTATCCCCCGCGCTGCAT 62.626 66.667 5.56 0.00 0.00 3.96
92 93 4.910585 CACCGCAGTATCCCCCGC 62.911 72.222 0.00 0.00 0.00 6.13
93 94 4.910585 GCACCGCAGTATCCCCCG 62.911 72.222 0.00 0.00 0.00 5.73
94 95 3.792736 TGCACCGCAGTATCCCCC 61.793 66.667 0.00 0.00 33.32 5.40
115 116 1.883084 GCACTTCCATAGCCGACGG 60.883 63.158 10.29 10.29 0.00 4.79
116 117 1.141881 AGCACTTCCATAGCCGACG 59.858 57.895 0.00 0.00 0.00 5.12
117 118 0.108138 ACAGCACTTCCATAGCCGAC 60.108 55.000 0.00 0.00 0.00 4.79
118 119 0.108186 CACAGCACTTCCATAGCCGA 60.108 55.000 0.00 0.00 0.00 5.54
119 120 1.091771 CCACAGCACTTCCATAGCCG 61.092 60.000 0.00 0.00 0.00 5.52
120 121 1.379642 GCCACAGCACTTCCATAGCC 61.380 60.000 0.00 0.00 39.53 3.93
121 122 1.709147 CGCCACAGCACTTCCATAGC 61.709 60.000 0.00 0.00 39.83 2.97
122 123 1.709147 GCGCCACAGCACTTCCATAG 61.709 60.000 0.00 0.00 39.83 2.23
123 124 1.745115 GCGCCACAGCACTTCCATA 60.745 57.895 0.00 0.00 39.83 2.74
124 125 3.058160 GCGCCACAGCACTTCCAT 61.058 61.111 0.00 0.00 39.83 3.41
127 128 4.077188 GTCGCGCCACAGCACTTC 62.077 66.667 0.00 0.00 39.83 3.01
128 129 4.908687 TGTCGCGCCACAGCACTT 62.909 61.111 2.90 0.00 39.83 3.16
140 141 1.548973 CCGTCATAATCCGCTGTCGC 61.549 60.000 0.00 0.00 0.00 5.19
141 142 1.548973 GCCGTCATAATCCGCTGTCG 61.549 60.000 0.00 0.00 0.00 4.35
142 143 1.548973 CGCCGTCATAATCCGCTGTC 61.549 60.000 0.00 0.00 0.00 3.51
143 144 1.591594 CGCCGTCATAATCCGCTGT 60.592 57.895 0.00 0.00 0.00 4.40
144 145 2.943345 GCGCCGTCATAATCCGCTG 61.943 63.158 0.00 0.00 41.28 5.18
145 146 2.661866 GCGCCGTCATAATCCGCT 60.662 61.111 0.00 0.00 41.28 5.52
146 147 2.943345 CTGCGCCGTCATAATCCGC 61.943 63.158 4.18 0.00 44.39 5.54
147 148 2.310233 CCTGCGCCGTCATAATCCG 61.310 63.158 4.18 0.00 0.00 4.18
148 149 2.607892 GCCTGCGCCGTCATAATCC 61.608 63.158 4.18 0.00 0.00 3.01
149 150 2.939022 GCCTGCGCCGTCATAATC 59.061 61.111 4.18 0.00 0.00 1.75
150 151 2.967076 CGCCTGCGCCGTCATAAT 60.967 61.111 4.18 0.00 0.00 1.28
170 171 2.960129 CAATCCGCCGTAGCCGAC 60.960 66.667 0.00 0.00 35.63 4.79
171 172 4.884257 GCAATCCGCCGTAGCCGA 62.884 66.667 0.00 0.00 35.63 5.54
199 200 1.287730 CCATCGCTAGAAGCATCCGC 61.288 60.000 0.00 0.00 42.58 5.54
200 201 0.315251 TCCATCGCTAGAAGCATCCG 59.685 55.000 0.00 0.00 42.58 4.18
201 202 1.337635 CCTCCATCGCTAGAAGCATCC 60.338 57.143 0.00 0.00 42.58 3.51
202 203 1.615883 TCCTCCATCGCTAGAAGCATC 59.384 52.381 0.00 0.00 42.58 3.91
203 204 1.617850 CTCCTCCATCGCTAGAAGCAT 59.382 52.381 0.00 0.00 42.58 3.79
204 205 1.035923 CTCCTCCATCGCTAGAAGCA 58.964 55.000 0.00 0.00 42.58 3.91
205 206 1.323412 TCTCCTCCATCGCTAGAAGC 58.677 55.000 0.00 0.00 38.02 3.86
206 207 3.571828 TCATTCTCCTCCATCGCTAGAAG 59.428 47.826 0.00 0.00 30.30 2.85
207 208 3.566351 TCATTCTCCTCCATCGCTAGAA 58.434 45.455 0.00 0.00 0.00 2.10
208 209 3.153130 CTCATTCTCCTCCATCGCTAGA 58.847 50.000 0.00 0.00 0.00 2.43
209 210 3.153130 TCTCATTCTCCTCCATCGCTAG 58.847 50.000 0.00 0.00 0.00 3.42
210 211 3.229697 TCTCATTCTCCTCCATCGCTA 57.770 47.619 0.00 0.00 0.00 4.26
211 212 2.079170 TCTCATTCTCCTCCATCGCT 57.921 50.000 0.00 0.00 0.00 4.93
212 213 3.256879 TGTATCTCATTCTCCTCCATCGC 59.743 47.826 0.00 0.00 0.00 4.58
213 214 4.082300 CCTGTATCTCATTCTCCTCCATCG 60.082 50.000 0.00 0.00 0.00 3.84
214 215 5.083122 TCCTGTATCTCATTCTCCTCCATC 58.917 45.833 0.00 0.00 0.00 3.51
215 216 5.085275 TCCTGTATCTCATTCTCCTCCAT 57.915 43.478 0.00 0.00 0.00 3.41
216 217 4.542906 TCCTGTATCTCATTCTCCTCCA 57.457 45.455 0.00 0.00 0.00 3.86
217 218 5.600484 TCTTTCCTGTATCTCATTCTCCTCC 59.400 44.000 0.00 0.00 0.00 4.30
218 219 6.549364 TCTCTTTCCTGTATCTCATTCTCCTC 59.451 42.308 0.00 0.00 0.00 3.71
219 220 6.439487 TCTCTTTCCTGTATCTCATTCTCCT 58.561 40.000 0.00 0.00 0.00 3.69
220 221 6.723298 TCTCTTTCCTGTATCTCATTCTCC 57.277 41.667 0.00 0.00 0.00 3.71
221 222 6.215845 GCTCTCTTTCCTGTATCTCATTCTC 58.784 44.000 0.00 0.00 0.00 2.87
222 223 5.221224 CGCTCTCTTTCCTGTATCTCATTCT 60.221 44.000 0.00 0.00 0.00 2.40
223 224 4.981674 CGCTCTCTTTCCTGTATCTCATTC 59.018 45.833 0.00 0.00 0.00 2.67
224 225 4.739137 GCGCTCTCTTTCCTGTATCTCATT 60.739 45.833 0.00 0.00 0.00 2.57
225 226 3.243704 GCGCTCTCTTTCCTGTATCTCAT 60.244 47.826 0.00 0.00 0.00 2.90
226 227 2.099921 GCGCTCTCTTTCCTGTATCTCA 59.900 50.000 0.00 0.00 0.00 3.27
227 228 2.544903 GGCGCTCTCTTTCCTGTATCTC 60.545 54.545 7.64 0.00 0.00 2.75
228 229 1.410882 GGCGCTCTCTTTCCTGTATCT 59.589 52.381 7.64 0.00 0.00 1.98
229 230 1.539280 GGGCGCTCTCTTTCCTGTATC 60.539 57.143 7.64 0.00 0.00 2.24
230 231 0.466124 GGGCGCTCTCTTTCCTGTAT 59.534 55.000 7.64 0.00 0.00 2.29
231 232 1.898154 GGGCGCTCTCTTTCCTGTA 59.102 57.895 7.64 0.00 0.00 2.74
232 233 2.665603 GGGCGCTCTCTTTCCTGT 59.334 61.111 7.64 0.00 0.00 4.00
233 234 2.510238 CGGGCGCTCTCTTTCCTG 60.510 66.667 5.36 0.00 0.00 3.86
234 235 2.997897 ACGGGCGCTCTCTTTCCT 60.998 61.111 5.36 0.00 0.00 3.36
235 236 2.815647 CACGGGCGCTCTCTTTCC 60.816 66.667 5.36 0.00 0.00 3.13
236 237 2.815647 CCACGGGCGCTCTCTTTC 60.816 66.667 5.36 0.00 0.00 2.62
237 238 3.591254 GACCACGGGCGCTCTCTTT 62.591 63.158 5.36 0.00 0.00 2.52
238 239 4.070552 GACCACGGGCGCTCTCTT 62.071 66.667 5.36 0.00 0.00 2.85
248 249 4.602259 ACAGCCACACGACCACGG 62.602 66.667 0.00 0.00 44.46 4.94
249 250 3.337889 CACAGCCACACGACCACG 61.338 66.667 0.00 0.00 45.75 4.94
250 251 1.498865 CTTCACAGCCACACGACCAC 61.499 60.000 0.00 0.00 0.00 4.16
251 252 1.227527 CTTCACAGCCACACGACCA 60.228 57.895 0.00 0.00 0.00 4.02
252 253 0.946221 CTCTTCACAGCCACACGACC 60.946 60.000 0.00 0.00 0.00 4.79
253 254 0.032130 TCTCTTCACAGCCACACGAC 59.968 55.000 0.00 0.00 0.00 4.34
254 255 0.969149 ATCTCTTCACAGCCACACGA 59.031 50.000 0.00 0.00 0.00 4.35
255 256 2.654749 TATCTCTTCACAGCCACACG 57.345 50.000 0.00 0.00 0.00 4.49
256 257 3.265791 CCTTATCTCTTCACAGCCACAC 58.734 50.000 0.00 0.00 0.00 3.82
257 258 2.906389 ACCTTATCTCTTCACAGCCACA 59.094 45.455 0.00 0.00 0.00 4.17
258 259 3.265791 CACCTTATCTCTTCACAGCCAC 58.734 50.000 0.00 0.00 0.00 5.01
259 260 2.237143 CCACCTTATCTCTTCACAGCCA 59.763 50.000 0.00 0.00 0.00 4.75
260 261 2.420687 CCCACCTTATCTCTTCACAGCC 60.421 54.545 0.00 0.00 0.00 4.85
261 262 2.501723 TCCCACCTTATCTCTTCACAGC 59.498 50.000 0.00 0.00 0.00 4.40
262 263 3.429547 CGTCCCACCTTATCTCTTCACAG 60.430 52.174 0.00 0.00 0.00 3.66
263 264 2.496070 CGTCCCACCTTATCTCTTCACA 59.504 50.000 0.00 0.00 0.00 3.58
264 265 2.758979 TCGTCCCACCTTATCTCTTCAC 59.241 50.000 0.00 0.00 0.00 3.18
265 266 3.024547 CTCGTCCCACCTTATCTCTTCA 58.975 50.000 0.00 0.00 0.00 3.02
266 267 3.288964 TCTCGTCCCACCTTATCTCTTC 58.711 50.000 0.00 0.00 0.00 2.87
267 268 3.053544 TCTCTCGTCCCACCTTATCTCTT 60.054 47.826 0.00 0.00 0.00 2.85
268 269 2.510382 TCTCTCGTCCCACCTTATCTCT 59.490 50.000 0.00 0.00 0.00 3.10
269 270 2.882137 CTCTCTCGTCCCACCTTATCTC 59.118 54.545 0.00 0.00 0.00 2.75
270 271 2.510382 TCTCTCTCGTCCCACCTTATCT 59.490 50.000 0.00 0.00 0.00 1.98
271 272 2.882137 CTCTCTCTCGTCCCACCTTATC 59.118 54.545 0.00 0.00 0.00 1.75
272 273 2.510382 TCTCTCTCTCGTCCCACCTTAT 59.490 50.000 0.00 0.00 0.00 1.73
273 274 1.914108 TCTCTCTCTCGTCCCACCTTA 59.086 52.381 0.00 0.00 0.00 2.69
274 275 0.699399 TCTCTCTCTCGTCCCACCTT 59.301 55.000 0.00 0.00 0.00 3.50
275 276 0.923358 ATCTCTCTCTCGTCCCACCT 59.077 55.000 0.00 0.00 0.00 4.00
276 277 1.028905 CATCTCTCTCTCGTCCCACC 58.971 60.000 0.00 0.00 0.00 4.61
277 278 1.673920 GACATCTCTCTCTCGTCCCAC 59.326 57.143 0.00 0.00 0.00 4.61
278 279 1.744114 CGACATCTCTCTCTCGTCCCA 60.744 57.143 0.00 0.00 0.00 4.37
279 280 0.941542 CGACATCTCTCTCTCGTCCC 59.058 60.000 0.00 0.00 0.00 4.46
280 281 0.941542 CCGACATCTCTCTCTCGTCC 59.058 60.000 0.00 0.00 0.00 4.79
281 282 1.595794 GACCGACATCTCTCTCTCGTC 59.404 57.143 0.00 0.00 0.00 4.20
282 283 1.658994 GACCGACATCTCTCTCTCGT 58.341 55.000 0.00 0.00 0.00 4.18
283 284 0.941542 GGACCGACATCTCTCTCTCG 59.058 60.000 0.00 0.00 0.00 4.04
284 285 1.946768 CTGGACCGACATCTCTCTCTC 59.053 57.143 0.00 0.00 0.00 3.20
285 286 1.562008 TCTGGACCGACATCTCTCTCT 59.438 52.381 0.00 0.00 0.00 3.10
286 287 1.946768 CTCTGGACCGACATCTCTCTC 59.053 57.143 0.00 0.00 0.00 3.20
287 288 1.409521 CCTCTGGACCGACATCTCTCT 60.410 57.143 0.00 0.00 0.00 3.10
288 289 1.028905 CCTCTGGACCGACATCTCTC 58.971 60.000 0.00 0.00 0.00 3.20
289 290 0.396417 CCCTCTGGACCGACATCTCT 60.396 60.000 0.00 0.00 0.00 3.10
290 291 0.395862 TCCCTCTGGACCGACATCTC 60.396 60.000 0.00 0.00 35.03 2.75
291 292 1.697910 TCCCTCTGGACCGACATCT 59.302 57.895 0.00 0.00 35.03 2.90
292 293 4.356979 TCCCTCTGGACCGACATC 57.643 61.111 0.00 0.00 35.03 3.06
300 301 1.458777 AACCACGTGTCCCTCTGGA 60.459 57.895 15.65 0.00 38.75 3.86
301 302 1.301716 CAACCACGTGTCCCTCTGG 60.302 63.158 15.65 0.00 0.00 3.86
302 303 1.301716 CCAACCACGTGTCCCTCTG 60.302 63.158 15.65 0.00 0.00 3.35
303 304 3.148084 CCAACCACGTGTCCCTCT 58.852 61.111 15.65 0.00 0.00 3.69
304 305 2.668550 GCCAACCACGTGTCCCTC 60.669 66.667 15.65 0.00 0.00 4.30
305 306 4.619227 CGCCAACCACGTGTCCCT 62.619 66.667 15.65 0.00 0.00 4.20
306 307 4.612412 TCGCCAACCACGTGTCCC 62.612 66.667 15.65 0.00 0.00 4.46
307 308 3.041940 CTCGCCAACCACGTGTCC 61.042 66.667 15.65 0.00 0.00 4.02
308 309 3.712881 GCTCGCCAACCACGTGTC 61.713 66.667 15.65 0.00 0.00 3.67
321 322 3.882844 CGTAAACCGCGTCGCTCG 61.883 66.667 16.36 7.64 43.12 5.03
330 331 2.649140 TTTTTCACTCGCGTAAACCG 57.351 45.000 5.77 0.00 40.40 4.44
331 332 4.136517 TGATTTTTCACTCGCGTAAACC 57.863 40.909 5.77 0.00 0.00 3.27
332 333 4.786575 GGATGATTTTTCACTCGCGTAAAC 59.213 41.667 5.77 0.00 0.00 2.01
333 334 4.434989 CGGATGATTTTTCACTCGCGTAAA 60.435 41.667 5.77 0.11 0.00 2.01
334 335 3.061563 CGGATGATTTTTCACTCGCGTAA 59.938 43.478 5.77 0.00 0.00 3.18
335 336 2.601314 CGGATGATTTTTCACTCGCGTA 59.399 45.455 5.77 0.00 0.00 4.42
336 337 1.393539 CGGATGATTTTTCACTCGCGT 59.606 47.619 5.77 0.00 0.00 6.01
337 338 1.267532 CCGGATGATTTTTCACTCGCG 60.268 52.381 0.00 0.00 0.00 5.87
338 339 1.737793 ACCGGATGATTTTTCACTCGC 59.262 47.619 9.46 0.00 0.00 5.03
339 340 3.188460 ACAACCGGATGATTTTTCACTCG 59.812 43.478 19.77 0.00 0.00 4.18
340 341 4.766404 ACAACCGGATGATTTTTCACTC 57.234 40.909 19.77 0.00 0.00 3.51
341 342 5.529581 AAACAACCGGATGATTTTTCACT 57.470 34.783 19.77 0.00 0.00 3.41
342 343 6.597262 AAAAACAACCGGATGATTTTTCAC 57.403 33.333 21.74 0.00 33.23 3.18
343 344 8.894768 ATTAAAAACAACCGGATGATTTTTCA 57.105 26.923 28.72 20.92 36.85 2.69
344 345 8.159709 CGATTAAAAACAACCGGATGATTTTTC 58.840 33.333 28.72 21.74 36.85 2.29
345 346 7.654116 ACGATTAAAAACAACCGGATGATTTTT 59.346 29.630 28.72 26.82 36.85 1.94
346 347 7.149307 ACGATTAAAAACAACCGGATGATTTT 58.851 30.769 27.37 27.37 38.39 1.82
347 348 6.683715 ACGATTAAAAACAACCGGATGATTT 58.316 32.000 19.77 16.12 0.00 2.17
348 349 6.262193 ACGATTAAAAACAACCGGATGATT 57.738 33.333 19.77 10.30 0.00 2.57
349 350 5.890424 ACGATTAAAAACAACCGGATGAT 57.110 34.783 19.77 3.13 0.00 2.45
350 351 5.692613 AACGATTAAAAACAACCGGATGA 57.307 34.783 19.77 0.00 0.00 2.92
351 352 6.129035 GGAAAACGATTAAAAACAACCGGATG 60.129 38.462 9.46 10.13 0.00 3.51
352 353 5.921976 GGAAAACGATTAAAAACAACCGGAT 59.078 36.000 9.46 0.00 0.00 4.18
353 354 5.163581 TGGAAAACGATTAAAAACAACCGGA 60.164 36.000 9.46 0.00 0.00 5.14
354 355 5.041940 TGGAAAACGATTAAAAACAACCGG 58.958 37.500 0.00 0.00 0.00 5.28
355 356 6.757026 ATGGAAAACGATTAAAAACAACCG 57.243 33.333 0.00 0.00 0.00 4.44
356 357 9.852481 GTTTATGGAAAACGATTAAAAACAACC 57.148 29.630 0.00 0.00 0.00 3.77
374 375 9.733556 ACAAGTGTTGAGTATAATGTTTATGGA 57.266 29.630 0.00 0.00 0.00 3.41
375 376 9.773328 CACAAGTGTTGAGTATAATGTTTATGG 57.227 33.333 0.00 0.00 0.00 2.74
380 381 8.869897 CGTATCACAAGTGTTGAGTATAATGTT 58.130 33.333 0.00 0.00 0.00 2.71
381 382 8.248253 TCGTATCACAAGTGTTGAGTATAATGT 58.752 33.333 0.00 0.00 0.00 2.71
382 383 8.628882 TCGTATCACAAGTGTTGAGTATAATG 57.371 34.615 0.00 0.00 0.00 1.90
383 384 7.435488 GCTCGTATCACAAGTGTTGAGTATAAT 59.565 37.037 0.00 0.00 0.00 1.28
384 385 6.750501 GCTCGTATCACAAGTGTTGAGTATAA 59.249 38.462 0.00 0.00 0.00 0.98
385 386 6.127842 TGCTCGTATCACAAGTGTTGAGTATA 60.128 38.462 0.00 0.00 0.00 1.47
386 387 5.103000 GCTCGTATCACAAGTGTTGAGTAT 58.897 41.667 0.00 0.00 0.00 2.12
387 388 4.022676 TGCTCGTATCACAAGTGTTGAGTA 60.023 41.667 0.00 1.48 0.00 2.59
388 389 3.243737 TGCTCGTATCACAAGTGTTGAGT 60.244 43.478 0.00 0.00 0.00 3.41
389 390 3.317150 TGCTCGTATCACAAGTGTTGAG 58.683 45.455 0.00 5.13 0.00 3.02
390 391 3.378911 TGCTCGTATCACAAGTGTTGA 57.621 42.857 0.00 0.00 0.00 3.18
391 392 3.740832 TCTTGCTCGTATCACAAGTGTTG 59.259 43.478 0.00 0.00 41.22 3.33
392 393 3.990092 TCTTGCTCGTATCACAAGTGTT 58.010 40.909 0.00 0.00 41.22 3.32
393 394 3.579709 CTCTTGCTCGTATCACAAGTGT 58.420 45.455 0.00 0.00 41.22 3.55
394 395 2.346847 GCTCTTGCTCGTATCACAAGTG 59.653 50.000 0.00 0.00 41.22 3.16
395 396 2.611518 GCTCTTGCTCGTATCACAAGT 58.388 47.619 0.00 0.00 41.22 3.16
396 397 1.929836 GGCTCTTGCTCGTATCACAAG 59.070 52.381 0.00 0.00 41.70 3.16
397 398 1.405526 GGGCTCTTGCTCGTATCACAA 60.406 52.381 0.00 0.00 39.59 3.33
398 399 0.175760 GGGCTCTTGCTCGTATCACA 59.824 55.000 0.00 0.00 39.59 3.58
399 400 0.461961 AGGGCTCTTGCTCGTATCAC 59.538 55.000 0.00 0.00 46.20 3.06
400 401 0.461548 CAGGGCTCTTGCTCGTATCA 59.538 55.000 0.00 0.00 46.20 2.15
401 402 0.461961 ACAGGGCTCTTGCTCGTATC 59.538 55.000 0.00 0.00 46.20 2.24
402 403 1.776662 TACAGGGCTCTTGCTCGTAT 58.223 50.000 0.00 0.00 46.20 3.06
403 404 1.776662 ATACAGGGCTCTTGCTCGTA 58.223 50.000 0.00 0.00 46.20 3.43
404 405 1.409427 GTATACAGGGCTCTTGCTCGT 59.591 52.381 0.00 0.00 46.20 4.18
405 406 1.600663 CGTATACAGGGCTCTTGCTCG 60.601 57.143 3.32 0.00 46.20 5.03
406 407 1.409427 ACGTATACAGGGCTCTTGCTC 59.591 52.381 3.32 0.00 40.76 4.26
407 408 1.486211 ACGTATACAGGGCTCTTGCT 58.514 50.000 3.32 0.00 39.59 3.91
408 409 3.447918 TTACGTATACAGGGCTCTTGC 57.552 47.619 3.32 0.00 38.76 4.01
409 410 6.281405 AGAAATTACGTATACAGGGCTCTTG 58.719 40.000 3.32 0.00 0.00 3.02
410 411 6.481434 AGAAATTACGTATACAGGGCTCTT 57.519 37.500 3.32 0.00 0.00 2.85
411 412 6.481434 AAGAAATTACGTATACAGGGCTCT 57.519 37.500 3.32 0.00 0.00 4.09
412 413 7.549615 AAAAGAAATTACGTATACAGGGCTC 57.450 36.000 3.32 0.00 0.00 4.70
413 414 9.052759 CATAAAAGAAATTACGTATACAGGGCT 57.947 33.333 3.32 0.00 0.00 5.19
414 415 9.048446 TCATAAAAGAAATTACGTATACAGGGC 57.952 33.333 3.32 0.00 0.00 5.19
421 422 9.142515 TGTGTCGTCATAAAAGAAATTACGTAT 57.857 29.630 0.00 0.00 0.00 3.06
422 423 8.518151 TGTGTCGTCATAAAAGAAATTACGTA 57.482 30.769 0.00 0.00 0.00 3.57
423 424 7.410800 TGTGTCGTCATAAAAGAAATTACGT 57.589 32.000 0.00 0.00 0.00 3.57
424 425 8.007716 AGTTGTGTCGTCATAAAAGAAATTACG 58.992 33.333 0.00 0.00 0.00 3.18
427 428 8.832521 TGTAGTTGTGTCGTCATAAAAGAAATT 58.167 29.630 0.00 0.00 0.00 1.82
428 429 8.373048 TGTAGTTGTGTCGTCATAAAAGAAAT 57.627 30.769 0.00 0.00 0.00 2.17
429 430 7.773864 TGTAGTTGTGTCGTCATAAAAGAAA 57.226 32.000 0.00 0.00 0.00 2.52
430 431 7.773864 TTGTAGTTGTGTCGTCATAAAAGAA 57.226 32.000 0.00 0.00 0.00 2.52
431 432 7.654116 TCATTGTAGTTGTGTCGTCATAAAAGA 59.346 33.333 0.00 0.00 0.00 2.52
432 433 7.792925 TCATTGTAGTTGTGTCGTCATAAAAG 58.207 34.615 0.00 0.00 0.00 2.27
433 434 7.716768 TCATTGTAGTTGTGTCGTCATAAAA 57.283 32.000 0.00 0.00 0.00 1.52
434 435 7.623297 GCATCATTGTAGTTGTGTCGTCATAAA 60.623 37.037 0.00 0.00 0.00 1.40
444 445 8.599055 AGTATATCAGCATCATTGTAGTTGTG 57.401 34.615 0.00 0.00 0.00 3.33
479 480 9.082313 GGATCACAAATTTGTCTTCCCATATAT 57.918 33.333 25.53 9.03 39.91 0.86
480 481 8.281531 AGGATCACAAATTTGTCTTCCCATATA 58.718 33.333 29.02 8.28 39.91 0.86
535 536 6.839033 TGTTTATGACCGTAGATAGATAGCG 58.161 40.000 0.00 0.00 0.00 4.26
536 537 9.077674 CAATGTTTATGACCGTAGATAGATAGC 57.922 37.037 0.00 0.00 0.00 2.97
539 540 9.477484 GAACAATGTTTATGACCGTAGATAGAT 57.523 33.333 0.00 0.00 0.00 1.98
648 867 3.056536 GGGGCAAGATCTTTGACTTTTCC 60.057 47.826 4.86 0.00 0.00 3.13
659 878 1.566298 AAAGAGCGGGGGCAAGATCT 61.566 55.000 0.00 0.00 34.24 2.75
663 882 0.895559 AAAGAAAGAGCGGGGGCAAG 60.896 55.000 0.00 0.00 0.00 4.01
874 1093 1.728069 GAGACCTAGTGCGATGCGA 59.272 57.895 0.00 0.00 0.00 5.10
1197 1450 5.365619 GCCGGGAAGAAGTTCTGATTTATA 58.634 41.667 6.06 0.00 32.72 0.98
1198 1451 4.200092 GCCGGGAAGAAGTTCTGATTTAT 58.800 43.478 6.06 0.00 32.72 1.40
1839 2092 3.184783 GCTCAAGATTCAGCGAGATGATG 59.815 47.826 0.00 0.00 34.51 3.07
2193 2446 2.322355 CCTACATCAGGCAGTTGAGG 57.678 55.000 0.00 0.00 37.70 3.86
2386 2641 4.514401 AGTCGCCAAGTTCTAATAAAGGG 58.486 43.478 0.00 0.00 0.00 3.95
2847 3538 5.796424 ATCAAAGTTGCTCAGGAATGTTT 57.204 34.783 0.00 0.00 0.00 2.83
2890 3581 9.653287 CAGGAATGTTAAATGACTACTGTAAGA 57.347 33.333 0.00 0.00 37.43 2.10
2897 3588 6.985188 TGCTCAGGAATGTTAAATGACTAC 57.015 37.500 0.00 0.00 0.00 2.73
2925 3675 7.054124 GGAGTCAATAGGTGGTAATCAAATCA 58.946 38.462 0.00 0.00 0.00 2.57
3061 3816 4.510038 AATGCATTGTGAAGGTTGAGAC 57.490 40.909 12.09 0.00 0.00 3.36
3116 3874 3.202818 TGCATTGGGGTGATTGTCTCTAT 59.797 43.478 0.00 0.00 0.00 1.98
3242 4004 4.307259 TGTGGCTTATCTCCCTATTTCCT 58.693 43.478 0.00 0.00 0.00 3.36
3244 4006 5.532779 CCTTTGTGGCTTATCTCCCTATTTC 59.467 44.000 0.00 0.00 0.00 2.17
3276 4038 7.388224 TCGTTTTCCTGTGCAGTGTAATTAATA 59.612 33.333 0.00 0.00 0.00 0.98
3381 4191 1.109323 AGGCCTTCACAACTGCCAAC 61.109 55.000 0.00 0.00 46.45 3.77
3923 4905 0.480252 ATGCCCTCCCAAATAGGCTC 59.520 55.000 0.00 0.00 45.94 4.70
3924 4906 0.936691 AATGCCCTCCCAAATAGGCT 59.063 50.000 1.12 0.00 45.94 4.58
4044 5033 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
4045 5034 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
4046 5035 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4047 5036 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
4048 5037 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4049 5038 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
4050 5039 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4051 5040 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4052 5041 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4053 5042 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4054 5043 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4055 5044 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4056 5045 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
4057 5046 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4058 5047 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4066 5055 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
4067 5056 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
4068 5057 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
4069 5058 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
4070 5059 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
4071 5060 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
4088 5077 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
4089 5078 8.408601 ACACGTTTTAGTATTAGATACATCCGT 58.591 33.333 0.00 0.00 38.21 4.69
4090 5079 8.792831 ACACGTTTTAGTATTAGATACATCCG 57.207 34.615 0.00 0.00 38.21 4.18
4091 5080 9.962783 AGACACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
4101 5090 9.095065 GGATGTATCAAGACACGTTTTAGTATT 57.905 33.333 0.00 0.00 30.52 1.89
4102 5091 7.434307 CGGATGTATCAAGACACGTTTTAGTAT 59.566 37.037 0.00 0.00 30.52 2.12
4103 5092 6.748658 CGGATGTATCAAGACACGTTTTAGTA 59.251 38.462 0.00 0.00 30.52 1.82
4104 5093 5.575606 CGGATGTATCAAGACACGTTTTAGT 59.424 40.000 0.00 0.00 30.52 2.24
4105 5094 5.575606 ACGGATGTATCAAGACACGTTTTAG 59.424 40.000 0.00 0.00 30.52 1.85
4106 5095 5.472148 ACGGATGTATCAAGACACGTTTTA 58.528 37.500 0.00 0.00 30.52 1.52
4107 5096 4.312443 ACGGATGTATCAAGACACGTTTT 58.688 39.130 0.00 0.00 30.52 2.43
4108 5097 3.921677 ACGGATGTATCAAGACACGTTT 58.078 40.909 0.00 0.00 30.52 3.60
4109 5098 3.587797 ACGGATGTATCAAGACACGTT 57.412 42.857 0.00 0.00 30.52 3.99
4110 5099 4.913335 ATACGGATGTATCAAGACACGT 57.087 40.909 0.00 0.00 36.56 4.49
4111 5100 7.113124 GTCTAAATACGGATGTATCAAGACACG 59.887 40.741 16.90 0.00 43.62 4.49
4112 5101 7.919091 TGTCTAAATACGGATGTATCAAGACAC 59.081 37.037 18.82 5.84 45.72 3.67
4113 5102 8.002984 TGTCTAAATACGGATGTATCAAGACA 57.997 34.615 18.82 18.82 46.81 3.41
4114 5103 8.867112 TTGTCTAAATACGGATGTATCAAGAC 57.133 34.615 15.87 15.87 43.97 3.01
4134 5123 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
4135 5124 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
4136 5125 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
4137 5126 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
4138 5127 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
4139 5128 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
4140 5129 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
4141 5130 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
4142 5131 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
4143 5132 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4144 5133 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4145 5134 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4146 5135 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4147 5136 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4148 5137 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4149 5138 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4150 5139 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4151 5140 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4152 5141 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4153 5142 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4154 5143 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
4155 5144 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
4156 5145 2.449730 AGATATACTCCCTCCGTCCCAA 59.550 50.000 0.00 0.00 0.00 4.12
4157 5146 2.071372 AGATATACTCCCTCCGTCCCA 58.929 52.381 0.00 0.00 0.00 4.37
4158 5147 2.903375 AGATATACTCCCTCCGTCCC 57.097 55.000 0.00 0.00 0.00 4.46
4159 5148 3.258622 CCAAAGATATACTCCCTCCGTCC 59.741 52.174 0.00 0.00 0.00 4.79
4160 5149 3.306156 GCCAAAGATATACTCCCTCCGTC 60.306 52.174 0.00 0.00 0.00 4.79
4161 5150 2.633481 GCCAAAGATATACTCCCTCCGT 59.367 50.000 0.00 0.00 0.00 4.69
4162 5151 2.632996 TGCCAAAGATATACTCCCTCCG 59.367 50.000 0.00 0.00 0.00 4.63
4163 5152 3.648545 AGTGCCAAAGATATACTCCCTCC 59.351 47.826 0.00 0.00 0.00 4.30
4164 5153 4.591072 AGAGTGCCAAAGATATACTCCCTC 59.409 45.833 0.00 0.00 38.76 4.30
4165 5154 4.561752 AGAGTGCCAAAGATATACTCCCT 58.438 43.478 0.00 0.00 38.76 4.20
4166 5155 4.965200 AGAGTGCCAAAGATATACTCCC 57.035 45.455 0.00 0.00 38.76 4.30
4167 5156 6.876257 CCATTAGAGTGCCAAAGATATACTCC 59.124 42.308 0.00 0.00 38.76 3.85
4168 5157 7.671302 TCCATTAGAGTGCCAAAGATATACTC 58.329 38.462 0.00 0.00 38.37 2.59
4279 5271 6.978080 GCTTGAAGTACAAATCTTGGTTGAAA 59.022 34.615 0.00 0.00 38.08 2.69
4375 5367 8.729756 ACAAAAGGTTGGAAAATGAAAAGAAAG 58.270 29.630 0.00 0.00 39.22 2.62
4450 5444 2.943036 ATAAACCCAAGTGTCACCGT 57.057 45.000 0.00 0.00 0.00 4.83
4452 5446 5.411669 CAGACTTATAAACCCAAGTGTCACC 59.588 44.000 0.00 0.00 35.17 4.02
4488 5483 0.650512 CCGCACCTAGCAAATACGTG 59.349 55.000 0.00 0.00 46.13 4.49
4888 5908 8.243426 GCAAGGTTCAATGTTAGATTTGTCATA 58.757 33.333 0.00 0.00 0.00 2.15
4950 5972 9.440773 TTCTAGCATTACATGGCAAATATCTAG 57.559 33.333 0.00 8.18 0.00 2.43
4951 5973 9.791801 TTTCTAGCATTACATGGCAAATATCTA 57.208 29.630 0.00 0.00 0.00 1.98
4952 5974 8.696043 TTTCTAGCATTACATGGCAAATATCT 57.304 30.769 0.00 0.00 0.00 1.98
4953 5975 9.403110 CTTTTCTAGCATTACATGGCAAATATC 57.597 33.333 0.00 0.00 0.00 1.63
4954 5976 8.362639 CCTTTTCTAGCATTACATGGCAAATAT 58.637 33.333 0.00 0.00 0.00 1.28
5000 6048 6.760161 CAATCTTTTGCCAAGAGAAAAGAC 57.240 37.500 1.41 0.00 45.99 3.01
5416 6634 6.952358 AGATAATGCAAGGAATATGAGCCAAT 59.048 34.615 0.00 0.00 0.00 3.16
5657 6895 5.760253 CCAACGCCAACTGAGATTATATTCT 59.240 40.000 0.00 0.00 0.00 2.40
5667 6922 1.518056 ATGCACCAACGCCAACTGAG 61.518 55.000 0.00 0.00 0.00 3.35
5750 7005 5.411831 TGATGCAAGCATAGACCCTATAG 57.588 43.478 7.64 0.00 36.70 1.31
5759 7014 7.902387 ATACTAGAACATGATGCAAGCATAG 57.098 36.000 7.64 4.05 43.92 2.23
5805 7063 0.606673 AGCTTTTTCGGACAGAGGGC 60.607 55.000 0.00 0.00 0.00 5.19
5849 7130 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
5864 7145 0.811281 CATCCGGAAAAGCTTGTCCC 59.189 55.000 26.94 14.52 0.00 4.46
5881 7162 3.571401 CGTTACCGTAATACTCCCTCCAT 59.429 47.826 0.00 0.00 0.00 3.41
5882 7163 2.951642 CGTTACCGTAATACTCCCTCCA 59.048 50.000 0.00 0.00 0.00 3.86
5930 7260 2.238521 CAAACCAGCATACCACCAGTT 58.761 47.619 0.00 0.00 0.00 3.16
6020 7366 4.162131 ACCAAATAATTCAAGGTGGATGCC 59.838 41.667 0.00 0.00 0.00 4.40
6074 7420 1.078848 GCCAGACCGAGCATGTTCT 60.079 57.895 8.01 0.00 0.00 3.01
6126 7472 3.370104 AGTGCTAGTAGATTCAGCCTGT 58.630 45.455 0.00 0.00 34.31 4.00
6222 7568 0.813610 CCACTTTCTGGCACACGACA 60.814 55.000 0.00 0.00 31.36 4.35
6426 7772 8.828688 ATCCATAATAACTAGCGTAGGTTTTC 57.171 34.615 0.00 0.00 40.68 2.29
6471 7817 6.208988 TCAGATCATTTACTCGCTACACTT 57.791 37.500 0.00 0.00 0.00 3.16
6582 8047 5.156804 AGAAATAAAGAACTATTGCCGCG 57.843 39.130 0.00 0.00 0.00 6.46
6587 8052 8.162245 GCGGCAAAAAGAAATAAAGAACTATTG 58.838 33.333 0.00 0.00 0.00 1.90
6678 10068 2.738521 CGTCGCCACCAGAACAGG 60.739 66.667 0.00 0.00 0.00 4.00
6697 10087 4.308526 TCAACCATTGTACATGCCCTAA 57.691 40.909 0.00 0.00 0.00 2.69
6698 10088 4.518278 ATCAACCATTGTACATGCCCTA 57.482 40.909 0.00 0.00 0.00 3.53
6699 10089 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
6700 10090 4.037923 CCTTATCAACCATTGTACATGCCC 59.962 45.833 0.00 0.00 0.00 5.36
6701 10091 4.644685 ACCTTATCAACCATTGTACATGCC 59.355 41.667 0.00 0.00 0.00 4.40
6702 10092 5.835113 ACCTTATCAACCATTGTACATGC 57.165 39.130 0.00 0.00 0.00 4.06
6703 10093 7.987458 AGACTACCTTATCAACCATTGTACATG 59.013 37.037 0.00 0.00 0.00 3.21
6704 10094 8.090788 AGACTACCTTATCAACCATTGTACAT 57.909 34.615 0.00 0.00 0.00 2.29
6705 10095 7.490657 AGACTACCTTATCAACCATTGTACA 57.509 36.000 0.00 0.00 0.00 2.90
6719 10109 9.209048 TGCAGGATTTAAGATAAGACTACCTTA 57.791 33.333 0.00 0.00 41.23 2.69
6720 10110 8.090788 TGCAGGATTTAAGATAAGACTACCTT 57.909 34.615 0.00 0.00 38.87 3.50
6721 10111 7.676683 TGCAGGATTTAAGATAAGACTACCT 57.323 36.000 0.00 0.00 0.00 3.08
6722 10112 7.934120 ACATGCAGGATTTAAGATAAGACTACC 59.066 37.037 4.84 0.00 0.00 3.18
6723 10113 8.894768 ACATGCAGGATTTAAGATAAGACTAC 57.105 34.615 4.84 0.00 0.00 2.73
6735 10125 9.814899 CCATTGTAAAATTACATGCAGGATTTA 57.185 29.630 4.84 2.62 42.66 1.40
6736 10126 8.320617 ACCATTGTAAAATTACATGCAGGATTT 58.679 29.630 4.84 0.00 42.66 2.17
6737 10127 7.850193 ACCATTGTAAAATTACATGCAGGATT 58.150 30.769 4.84 0.00 42.66 3.01
6738 10128 7.422465 ACCATTGTAAAATTACATGCAGGAT 57.578 32.000 4.84 0.00 42.66 3.24
6739 10129 6.849085 ACCATTGTAAAATTACATGCAGGA 57.151 33.333 4.84 0.00 42.66 3.86
6740 10130 7.095910 TCAACCATTGTAAAATTACATGCAGG 58.904 34.615 6.82 0.00 42.66 4.85
6741 10131 8.706492 ATCAACCATTGTAAAATTACATGCAG 57.294 30.769 6.82 0.75 42.66 4.41
6750 10140 9.975218 AGACTACCTTATCAACCATTGTAAAAT 57.025 29.630 0.00 0.00 0.00 1.82
6751 10141 9.802039 AAGACTACCTTATCAACCATTGTAAAA 57.198 29.630 0.00 0.00 32.24 1.52
6766 10156 9.209048 TGCAGGATTTAAGATAAGACTACCTTA 57.791 33.333 0.00 0.00 41.23 2.69
6767 10157 8.090788 TGCAGGATTTAAGATAAGACTACCTT 57.909 34.615 0.00 0.00 38.87 3.50
6768 10158 7.676683 TGCAGGATTTAAGATAAGACTACCT 57.323 36.000 0.00 0.00 0.00 3.08
6769 10159 7.934120 ACATGCAGGATTTAAGATAAGACTACC 59.066 37.037 4.84 0.00 0.00 3.18
6770 10160 8.894768 ACATGCAGGATTTAAGATAAGACTAC 57.105 34.615 4.84 0.00 0.00 2.73
6784 10174 9.797642 TGTCATATCTAAATTACATGCAGGATT 57.202 29.630 4.84 0.00 0.00 3.01
6785 10175 9.797642 TTGTCATATCTAAATTACATGCAGGAT 57.202 29.630 4.84 0.00 0.00 3.24
6786 10176 9.625747 TTTGTCATATCTAAATTACATGCAGGA 57.374 29.630 4.84 0.00 0.00 3.86
6854 10244 9.662947 ACCACGTTTTTAAGAATAGCTAGTTAT 57.337 29.630 0.00 0.00 0.00 1.89
6855 10245 8.928733 CACCACGTTTTTAAGAATAGCTAGTTA 58.071 33.333 0.00 0.00 0.00 2.24
6856 10246 7.658575 TCACCACGTTTTTAAGAATAGCTAGTT 59.341 33.333 0.00 0.00 0.00 2.24
6857 10247 7.117379 GTCACCACGTTTTTAAGAATAGCTAGT 59.883 37.037 0.00 0.00 0.00 2.57
6858 10248 7.117236 TGTCACCACGTTTTTAAGAATAGCTAG 59.883 37.037 0.00 0.00 0.00 3.42
6859 10249 6.930164 TGTCACCACGTTTTTAAGAATAGCTA 59.070 34.615 0.00 0.00 0.00 3.32
6860 10250 5.761234 TGTCACCACGTTTTTAAGAATAGCT 59.239 36.000 0.00 0.00 0.00 3.32
6861 10251 5.849604 GTGTCACCACGTTTTTAAGAATAGC 59.150 40.000 0.00 0.00 0.00 2.97
6862 10252 6.950545 TGTGTCACCACGTTTTTAAGAATAG 58.049 36.000 0.00 0.00 44.92 1.73
6863 10253 6.922247 TGTGTCACCACGTTTTTAAGAATA 57.078 33.333 0.00 0.00 44.92 1.75
6864 10254 5.821516 TGTGTCACCACGTTTTTAAGAAT 57.178 34.783 0.00 0.00 44.92 2.40
6865 10255 5.821516 ATGTGTCACCACGTTTTTAAGAA 57.178 34.783 0.00 0.00 44.92 2.52
6866 10256 7.012515 ACAATATGTGTCACCACGTTTTTAAGA 59.987 33.333 0.00 0.00 44.92 2.10
6867 10257 7.112844 CACAATATGTGTCACCACGTTTTTAAG 59.887 37.037 0.00 0.00 44.92 1.85
6868 10258 6.913132 CACAATATGTGTCACCACGTTTTTAA 59.087 34.615 0.00 0.00 44.92 1.52
6869 10259 6.431278 CACAATATGTGTCACCACGTTTTTA 58.569 36.000 0.00 0.00 44.92 1.52
6870 10260 5.277825 CACAATATGTGTCACCACGTTTTT 58.722 37.500 0.00 0.00 44.92 1.94
6871 10261 4.854399 CACAATATGTGTCACCACGTTTT 58.146 39.130 0.00 0.00 44.92 2.43
6872 10262 4.481930 CACAATATGTGTCACCACGTTT 57.518 40.909 0.00 0.00 44.92 3.60
6882 10272 8.209584 AAGATGATCTCTTAGCACAATATGTGT 58.790 33.333 11.70 2.49 44.86 3.72
6883 10273 8.604640 AAGATGATCTCTTAGCACAATATGTG 57.395 34.615 6.13 6.13 45.33 3.21
6884 10274 9.624373 AAAAGATGATCTCTTAGCACAATATGT 57.376 29.630 0.00 0.00 43.60 2.29
6885 10275 9.880064 CAAAAGATGATCTCTTAGCACAATATG 57.120 33.333 0.00 0.00 43.60 1.78
6886 10276 8.566260 GCAAAAGATGATCTCTTAGCACAATAT 58.434 33.333 17.43 0.00 43.60 1.28
6887 10277 7.012704 GGCAAAAGATGATCTCTTAGCACAATA 59.987 37.037 20.51 0.00 43.60 1.90
6888 10278 6.183360 GGCAAAAGATGATCTCTTAGCACAAT 60.183 38.462 20.51 0.00 43.60 2.71
6889 10279 5.124457 GGCAAAAGATGATCTCTTAGCACAA 59.876 40.000 20.51 0.00 43.60 3.33
6890 10280 4.637534 GGCAAAAGATGATCTCTTAGCACA 59.362 41.667 20.51 0.00 43.60 4.57
6891 10281 4.880696 AGGCAAAAGATGATCTCTTAGCAC 59.119 41.667 20.51 14.78 43.60 4.40
6892 10282 5.108187 AGGCAAAAGATGATCTCTTAGCA 57.892 39.130 20.51 0.00 43.60 3.49
6893 10283 5.821995 AGAAGGCAAAAGATGATCTCTTAGC 59.178 40.000 0.00 15.74 43.60 3.09
6894 10284 7.274447 AGAGAAGGCAAAAGATGATCTCTTAG 58.726 38.462 0.00 5.80 43.60 2.18
6895 10285 7.192852 AGAGAAGGCAAAAGATGATCTCTTA 57.807 36.000 0.00 0.00 43.60 2.10
6896 10286 6.064735 AGAGAAGGCAAAAGATGATCTCTT 57.935 37.500 0.00 0.00 46.44 2.85
6897 10287 5.697082 AGAGAAGGCAAAAGATGATCTCT 57.303 39.130 0.00 0.00 38.86 3.10
6898 10288 7.856145 TTAAGAGAAGGCAAAAGATGATCTC 57.144 36.000 0.00 0.00 36.14 2.75
6899 10289 8.820153 ATTTAAGAGAAGGCAAAAGATGATCT 57.180 30.769 0.00 0.00 0.00 2.75
6902 10292 9.739276 TCTTATTTAAGAGAAGGCAAAAGATGA 57.261 29.630 0.00 0.00 37.40 2.92
6924 10314 9.838339 GGGAAATCATAAGATTGTCTTCTCTTA 57.162 33.333 0.00 0.00 43.52 2.10
6925 10315 8.555729 AGGGAAATCATAAGATTGTCTTCTCTT 58.444 33.333 0.00 0.00 43.52 2.85
6926 10316 8.100135 AGGGAAATCATAAGATTGTCTTCTCT 57.900 34.615 0.00 0.00 43.52 3.10
6927 10317 8.744568 AAGGGAAATCATAAGATTGTCTTCTC 57.255 34.615 0.00 0.00 43.52 2.87
6937 10327 9.919416 TTGTCATGAATAAGGGAAATCATAAGA 57.081 29.630 0.00 0.00 31.59 2.10
6940 10330 9.645128 ACATTGTCATGAATAAGGGAAATCATA 57.355 29.630 0.00 0.00 34.11 2.15
6941 10331 8.543293 ACATTGTCATGAATAAGGGAAATCAT 57.457 30.769 0.00 0.00 34.11 2.45
6942 10332 7.614974 TGACATTGTCATGAATAAGGGAAATCA 59.385 33.333 15.41 0.00 37.67 2.57
6943 10333 7.999679 TGACATTGTCATGAATAAGGGAAATC 58.000 34.615 15.41 0.00 37.67 2.17
6944 10334 7.616935 ACTGACATTGTCATGAATAAGGGAAAT 59.383 33.333 19.29 0.00 41.94 2.17
6945 10335 6.947733 ACTGACATTGTCATGAATAAGGGAAA 59.052 34.615 19.29 0.00 41.94 3.13
6946 10336 6.484288 ACTGACATTGTCATGAATAAGGGAA 58.516 36.000 19.29 0.00 41.94 3.97
6947 10337 6.065976 ACTGACATTGTCATGAATAAGGGA 57.934 37.500 19.29 0.00 41.94 4.20
6948 10338 6.375174 TCAACTGACATTGTCATGAATAAGGG 59.625 38.462 19.29 7.51 41.94 3.95
6949 10339 7.120285 ACTCAACTGACATTGTCATGAATAAGG 59.880 37.037 19.29 11.05 41.94 2.69
6950 10340 8.037382 ACTCAACTGACATTGTCATGAATAAG 57.963 34.615 19.29 13.72 41.94 1.73
7190 10586 5.537674 AGCAAGAAATCAGTCTGGTTGAATT 59.462 36.000 0.00 0.00 0.00 2.17
7199 10595 1.353694 AGGCCAGCAAGAAATCAGTCT 59.646 47.619 5.01 0.00 0.00 3.24
7218 10614 2.553172 AGCGGGCTCTTCGTTAGTATAG 59.447 50.000 0.00 0.00 0.00 1.31
7219 10615 2.579873 AGCGGGCTCTTCGTTAGTATA 58.420 47.619 0.00 0.00 0.00 1.47
7220 10616 1.400737 AGCGGGCTCTTCGTTAGTAT 58.599 50.000 0.00 0.00 0.00 2.12
7221 10617 1.133790 GAAGCGGGCTCTTCGTTAGTA 59.866 52.381 0.00 0.00 33.93 1.82
7223 10619 0.173708 AGAAGCGGGCTCTTCGTTAG 59.826 55.000 12.05 0.00 45.28 2.34
7224 10620 0.172803 GAGAAGCGGGCTCTTCGTTA 59.827 55.000 12.05 0.00 45.28 3.18
7225 10621 1.079750 GAGAAGCGGGCTCTTCGTT 60.080 57.895 12.05 0.13 45.28 3.85
7226 10622 0.680280 TAGAGAAGCGGGCTCTTCGT 60.680 55.000 10.51 8.04 45.28 3.85
7228 10624 2.364002 AGAATAGAGAAGCGGGCTCTTC 59.636 50.000 10.51 10.58 42.43 2.87
7229 10625 2.364002 GAGAATAGAGAAGCGGGCTCTT 59.636 50.000 10.51 0.00 42.43 2.85
7230 10626 1.960689 GAGAATAGAGAAGCGGGCTCT 59.039 52.381 10.18 10.18 44.46 4.09
7231 10627 1.960689 AGAGAATAGAGAAGCGGGCTC 59.039 52.381 0.00 0.00 0.00 4.70
7232 10628 1.960689 GAGAGAATAGAGAAGCGGGCT 59.039 52.381 0.00 0.00 0.00 5.19
7234 10630 2.556622 GAGGAGAGAATAGAGAAGCGGG 59.443 54.545 0.00 0.00 0.00 6.13
7235 10631 3.486383 AGAGGAGAGAATAGAGAAGCGG 58.514 50.000 0.00 0.00 0.00 5.52
7237 10633 5.827797 TGAGAAGAGGAGAGAATAGAGAAGC 59.172 44.000 0.00 0.00 0.00 3.86
7238 10634 8.355169 CAATGAGAAGAGGAGAGAATAGAGAAG 58.645 40.741 0.00 0.00 0.00 2.85
7241 10637 6.266103 AGCAATGAGAAGAGGAGAGAATAGAG 59.734 42.308 0.00 0.00 0.00 2.43
7243 10639 6.409524 AGCAATGAGAAGAGGAGAGAATAG 57.590 41.667 0.00 0.00 0.00 1.73
7245 10641 4.101430 GGAGCAATGAGAAGAGGAGAGAAT 59.899 45.833 0.00 0.00 0.00 2.40
7246 10642 3.450457 GGAGCAATGAGAAGAGGAGAGAA 59.550 47.826 0.00 0.00 0.00 2.87
7247 10643 3.030291 GGAGCAATGAGAAGAGGAGAGA 58.970 50.000 0.00 0.00 0.00 3.10
7248 10644 2.765135 TGGAGCAATGAGAAGAGGAGAG 59.235 50.000 0.00 0.00 0.00 3.20
7249 10645 2.825223 TGGAGCAATGAGAAGAGGAGA 58.175 47.619 0.00 0.00 0.00 3.71
7250 10646 3.055240 AGTTGGAGCAATGAGAAGAGGAG 60.055 47.826 0.00 0.00 0.00 3.69
7251 10647 2.909006 AGTTGGAGCAATGAGAAGAGGA 59.091 45.455 0.00 0.00 0.00 3.71
7252 10648 3.347077 AGTTGGAGCAATGAGAAGAGG 57.653 47.619 0.00 0.00 0.00 3.69
7253 10649 4.332268 GCTTAGTTGGAGCAATGAGAAGAG 59.668 45.833 0.00 0.00 39.89 2.85
7254 10650 4.256920 GCTTAGTTGGAGCAATGAGAAGA 58.743 43.478 0.00 0.00 39.89 2.87
7255 10651 4.005650 TGCTTAGTTGGAGCAATGAGAAG 58.994 43.478 0.00 0.00 46.35 2.85
7256 10652 4.019792 TGCTTAGTTGGAGCAATGAGAA 57.980 40.909 0.00 0.00 46.35 2.87
7257 10653 3.701205 TGCTTAGTTGGAGCAATGAGA 57.299 42.857 0.00 0.00 46.35 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.