Multiple sequence alignment - TraesCS5B01G128600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G128600 chr5B 100.000 3338 0 0 1 3338 234905361 234902024 0.000000e+00 6165.0
1 TraesCS5B01G128600 chr5B 97.500 40 1 0 132 171 234905193 234905154 5.980000e-08 69.4
2 TraesCS5B01G128600 chr5B 97.500 40 1 0 169 208 234905230 234905191 5.980000e-08 69.4
3 TraesCS5B01G128600 chr5D 94.911 2751 106 15 602 3337 218261786 218259055 0.000000e+00 4274.0
4 TraesCS5B01G128600 chr5D 90.400 125 11 1 451 575 218261908 218261785 2.660000e-36 163.0
5 TraesCS5B01G128600 chr5A 96.152 2027 58 7 602 2614 291272779 291270759 0.000000e+00 3293.0
6 TraesCS5B01G128600 chr5A 91.200 125 10 1 451 575 291272901 291272778 5.730000e-38 169.0
7 TraesCS5B01G128600 chrUn 98.753 401 5 0 1604 2004 478699349 478699749 0.000000e+00 713.0
8 TraesCS5B01G128600 chr6D 79.315 817 162 7 1415 2227 203748683 203747870 1.740000e-157 566.0
9 TraesCS5B01G128600 chr6A 79.289 816 164 5 1415 2227 289027066 289026253 1.740000e-157 566.0
10 TraesCS5B01G128600 chr6B 79.167 816 165 5 1415 2227 316460103 316459290 8.090000e-156 560.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G128600 chr5B 234902024 234905361 3337 True 2101.266667 6165 98.333333 1 3338 3 chr5B.!!$R1 3337
1 TraesCS5B01G128600 chr5D 218259055 218261908 2853 True 2218.500000 4274 92.655500 451 3337 2 chr5D.!!$R1 2886
2 TraesCS5B01G128600 chr5A 291270759 291272901 2142 True 1731.000000 3293 93.676000 451 2614 2 chr5A.!!$R1 2163
3 TraesCS5B01G128600 chr6D 203747870 203748683 813 True 566.000000 566 79.315000 1415 2227 1 chr6D.!!$R1 812
4 TraesCS5B01G128600 chr6A 289026253 289027066 813 True 566.000000 566 79.289000 1415 2227 1 chr6A.!!$R1 812
5 TraesCS5B01G128600 chr6B 316459290 316460103 813 True 560.000000 560 79.167000 1415 2227 1 chr6B.!!$R1 812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.043310 GATGTTCGCATCGTTACGGC 60.043 55.0 4.53 0.0 43.72 5.68 F
572 573 0.095245 CCGACGCACATGAACACATC 59.905 55.0 0.00 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 2299 0.318762 AGAGACGCCTCCTTGTTCAC 59.681 55.0 0.0 0.0 40.3 3.18 R
2486 2500 0.593128 CGTCCTGGAGCCAAAACAAG 59.407 55.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.297830 TCGTCATAGACAGGTGTGTTG 57.702 47.619 0.00 0.00 36.88 3.33
21 22 2.626266 TCGTCATAGACAGGTGTGTTGT 59.374 45.455 0.00 0.00 36.88 3.32
22 23 3.069016 TCGTCATAGACAGGTGTGTTGTT 59.931 43.478 0.00 0.00 36.88 2.83
23 24 4.278919 TCGTCATAGACAGGTGTGTTGTTA 59.721 41.667 0.00 0.00 36.88 2.41
24 25 4.384846 CGTCATAGACAGGTGTGTTGTTAC 59.615 45.833 0.00 0.00 36.88 2.50
25 26 5.294356 GTCATAGACAGGTGTGTTGTTACA 58.706 41.667 0.00 0.00 36.88 2.41
26 27 5.756347 GTCATAGACAGGTGTGTTGTTACAA 59.244 40.000 0.00 0.00 36.88 2.41
27 28 6.426937 GTCATAGACAGGTGTGTTGTTACAAT 59.573 38.462 0.00 0.00 36.88 2.71
28 29 6.426633 TCATAGACAGGTGTGTTGTTACAATG 59.573 38.462 0.00 0.00 36.88 2.82
29 30 4.523083 AGACAGGTGTGTTGTTACAATGT 58.477 39.130 0.00 0.00 36.88 2.71
30 31 4.574828 AGACAGGTGTGTTGTTACAATGTC 59.425 41.667 15.34 15.34 43.20 3.06
31 32 3.630312 ACAGGTGTGTTGTTACAATGTCC 59.370 43.478 0.00 2.72 35.69 4.02
32 33 3.629855 CAGGTGTGTTGTTACAATGTCCA 59.370 43.478 0.00 0.00 35.69 4.02
33 34 3.882888 AGGTGTGTTGTTACAATGTCCAG 59.117 43.478 0.00 0.00 35.69 3.86
34 35 3.880490 GGTGTGTTGTTACAATGTCCAGA 59.120 43.478 0.00 0.00 35.69 3.86
35 36 4.024048 GGTGTGTTGTTACAATGTCCAGAG 60.024 45.833 0.00 0.00 35.69 3.35
36 37 4.814234 GTGTGTTGTTACAATGTCCAGAGA 59.186 41.667 0.00 0.00 35.69 3.10
37 38 5.470098 GTGTGTTGTTACAATGTCCAGAGAT 59.530 40.000 0.00 0.00 35.69 2.75
38 39 5.469760 TGTGTTGTTACAATGTCCAGAGATG 59.530 40.000 0.00 0.00 35.69 2.90
39 40 5.003160 TGTTGTTACAATGTCCAGAGATGG 58.997 41.667 0.00 0.00 0.00 3.51
40 41 4.908601 TGTTACAATGTCCAGAGATGGT 57.091 40.909 0.00 0.00 0.00 3.55
41 42 5.241403 TGTTACAATGTCCAGAGATGGTT 57.759 39.130 0.00 0.00 0.00 3.67
42 43 5.630121 TGTTACAATGTCCAGAGATGGTTT 58.370 37.500 0.00 0.00 0.00 3.27
43 44 6.068010 TGTTACAATGTCCAGAGATGGTTTT 58.932 36.000 0.00 0.00 0.00 2.43
44 45 6.206634 TGTTACAATGTCCAGAGATGGTTTTC 59.793 38.462 0.00 0.00 0.00 2.29
45 46 4.728772 ACAATGTCCAGAGATGGTTTTCA 58.271 39.130 0.00 0.00 0.00 2.69
46 47 5.139727 ACAATGTCCAGAGATGGTTTTCAA 58.860 37.500 0.00 0.00 0.00 2.69
47 48 5.776716 ACAATGTCCAGAGATGGTTTTCAAT 59.223 36.000 0.00 0.00 0.00 2.57
48 49 6.268387 ACAATGTCCAGAGATGGTTTTCAATT 59.732 34.615 0.00 0.00 0.00 2.32
49 50 5.710513 TGTCCAGAGATGGTTTTCAATTG 57.289 39.130 0.00 0.00 0.00 2.32
50 51 4.523943 TGTCCAGAGATGGTTTTCAATTGG 59.476 41.667 5.42 0.00 0.00 3.16
51 52 4.524328 GTCCAGAGATGGTTTTCAATTGGT 59.476 41.667 5.42 0.00 0.00 3.67
52 53 4.523943 TCCAGAGATGGTTTTCAATTGGTG 59.476 41.667 5.42 0.00 0.00 4.17
53 54 4.281688 CCAGAGATGGTTTTCAATTGGTGT 59.718 41.667 5.42 0.00 0.00 4.16
54 55 5.221501 CCAGAGATGGTTTTCAATTGGTGTT 60.222 40.000 5.42 0.00 0.00 3.32
55 56 6.282930 CAGAGATGGTTTTCAATTGGTGTTT 58.717 36.000 5.42 0.00 0.00 2.83
56 57 6.201425 CAGAGATGGTTTTCAATTGGTGTTTG 59.799 38.462 5.42 0.00 0.00 2.93
57 58 6.098124 AGAGATGGTTTTCAATTGGTGTTTGA 59.902 34.615 5.42 0.00 0.00 2.69
58 59 6.648192 AGATGGTTTTCAATTGGTGTTTGAA 58.352 32.000 5.42 0.00 40.37 2.69
59 60 7.281841 AGATGGTTTTCAATTGGTGTTTGAAT 58.718 30.769 5.42 0.00 41.36 2.57
60 61 6.917217 TGGTTTTCAATTGGTGTTTGAATC 57.083 33.333 5.42 0.00 41.36 2.52
61 62 6.648192 TGGTTTTCAATTGGTGTTTGAATCT 58.352 32.000 5.42 0.00 41.36 2.40
62 63 7.786030 TGGTTTTCAATTGGTGTTTGAATCTA 58.214 30.769 5.42 0.00 41.36 1.98
63 64 8.428063 TGGTTTTCAATTGGTGTTTGAATCTAT 58.572 29.630 5.42 0.00 41.36 1.98
64 65 9.271828 GGTTTTCAATTGGTGTTTGAATCTATT 57.728 29.630 5.42 0.00 41.36 1.73
66 67 9.487790 TTTTCAATTGGTGTTTGAATCTATTCC 57.512 29.630 5.42 0.00 41.36 3.01
67 68 7.773489 TCAATTGGTGTTTGAATCTATTCCA 57.227 32.000 5.42 0.00 35.97 3.53
68 69 8.365060 TCAATTGGTGTTTGAATCTATTCCAT 57.635 30.769 5.42 0.00 35.97 3.41
69 70 8.469200 TCAATTGGTGTTTGAATCTATTCCATC 58.531 33.333 5.42 0.00 35.97 3.51
70 71 8.472413 CAATTGGTGTTTGAATCTATTCCATCT 58.528 33.333 0.00 0.00 35.97 2.90
71 72 8.599624 ATTGGTGTTTGAATCTATTCCATCTT 57.400 30.769 0.41 0.00 35.97 2.40
72 73 7.395190 TGGTGTTTGAATCTATTCCATCTTG 57.605 36.000 0.41 0.00 35.97 3.02
73 74 6.947733 TGGTGTTTGAATCTATTCCATCTTGT 59.052 34.615 0.41 0.00 35.97 3.16
74 75 8.106462 TGGTGTTTGAATCTATTCCATCTTGTA 58.894 33.333 0.41 0.00 35.97 2.41
75 76 9.125026 GGTGTTTGAATCTATTCCATCTTGTAT 57.875 33.333 0.41 0.00 35.97 2.29
77 78 9.045223 TGTTTGAATCTATTCCATCTTGTATCG 57.955 33.333 0.41 0.00 35.97 2.92
78 79 8.499162 GTTTGAATCTATTCCATCTTGTATCGG 58.501 37.037 0.41 0.00 35.97 4.18
79 80 7.539034 TGAATCTATTCCATCTTGTATCGGA 57.461 36.000 0.41 0.00 35.97 4.55
80 81 8.138928 TGAATCTATTCCATCTTGTATCGGAT 57.861 34.615 0.00 0.00 35.97 4.18
81 82 8.597167 TGAATCTATTCCATCTTGTATCGGATT 58.403 33.333 0.00 0.00 35.97 3.01
82 83 9.442047 GAATCTATTCCATCTTGTATCGGATTT 57.558 33.333 0.00 0.00 0.00 2.17
83 84 8.783833 ATCTATTCCATCTTGTATCGGATTTG 57.216 34.615 0.00 0.00 0.00 2.32
84 85 7.735917 TCTATTCCATCTTGTATCGGATTTGT 58.264 34.615 0.00 0.00 0.00 2.83
85 86 6.624352 ATTCCATCTTGTATCGGATTTGTG 57.376 37.500 0.00 0.00 0.00 3.33
86 87 5.351948 TCCATCTTGTATCGGATTTGTGA 57.648 39.130 0.00 0.00 0.00 3.58
87 88 5.739959 TCCATCTTGTATCGGATTTGTGAA 58.260 37.500 0.00 0.00 0.00 3.18
88 89 5.817296 TCCATCTTGTATCGGATTTGTGAAG 59.183 40.000 0.00 0.00 0.00 3.02
89 90 5.586243 CCATCTTGTATCGGATTTGTGAAGT 59.414 40.000 0.00 0.00 0.00 3.01
90 91 6.094048 CCATCTTGTATCGGATTTGTGAAGTT 59.906 38.462 0.00 0.00 0.00 2.66
91 92 7.362056 CCATCTTGTATCGGATTTGTGAAGTTT 60.362 37.037 0.00 0.00 0.00 2.66
92 93 8.664798 CATCTTGTATCGGATTTGTGAAGTTTA 58.335 33.333 0.00 0.00 0.00 2.01
93 94 8.786826 TCTTGTATCGGATTTGTGAAGTTTAT 57.213 30.769 0.00 0.00 0.00 1.40
94 95 9.226606 TCTTGTATCGGATTTGTGAAGTTTATT 57.773 29.630 0.00 0.00 0.00 1.40
95 96 9.840427 CTTGTATCGGATTTGTGAAGTTTATTT 57.160 29.630 0.00 0.00 0.00 1.40
96 97 9.834628 TTGTATCGGATTTGTGAAGTTTATTTC 57.165 29.630 0.00 0.00 0.00 2.17
97 98 8.172484 TGTATCGGATTTGTGAAGTTTATTTCG 58.828 33.333 0.00 0.00 0.00 3.46
98 99 6.788684 TCGGATTTGTGAAGTTTATTTCGA 57.211 33.333 0.00 0.00 0.00 3.71
99 100 7.192148 TCGGATTTGTGAAGTTTATTTCGAA 57.808 32.000 0.00 0.00 0.00 3.71
100 101 7.640852 TCGGATTTGTGAAGTTTATTTCGAAA 58.359 30.769 13.91 13.91 0.00 3.46
101 102 8.129840 TCGGATTTGTGAAGTTTATTTCGAAAA 58.870 29.630 15.66 1.71 0.00 2.29
102 103 8.911662 CGGATTTGTGAAGTTTATTTCGAAAAT 58.088 29.630 15.66 6.39 32.23 1.82
107 108 9.887406 TTGTGAAGTTTATTTCGAAAATAGACC 57.113 29.630 15.66 3.00 0.00 3.85
108 109 8.508875 TGTGAAGTTTATTTCGAAAATAGACCC 58.491 33.333 15.66 3.74 0.00 4.46
109 110 8.727910 GTGAAGTTTATTTCGAAAATAGACCCT 58.272 33.333 15.66 0.00 0.00 4.34
110 111 9.292195 TGAAGTTTATTTCGAAAATAGACCCTT 57.708 29.630 15.66 10.21 0.00 3.95
116 117 9.743581 TTATTTCGAAAATAGACCCTTTAAGGT 57.256 29.630 15.66 0.00 45.12 3.50
117 118 7.443259 TTTCGAAAATAGACCCTTTAAGGTG 57.557 36.000 8.44 4.26 41.42 4.00
118 119 6.363167 TCGAAAATAGACCCTTTAAGGTGA 57.637 37.500 10.40 0.00 41.42 4.02
119 120 6.403878 TCGAAAATAGACCCTTTAAGGTGAG 58.596 40.000 10.40 0.00 41.42 3.51
120 121 5.585047 CGAAAATAGACCCTTTAAGGTGAGG 59.415 44.000 10.40 0.00 41.42 3.86
121 122 6.464530 AAAATAGACCCTTTAAGGTGAGGT 57.535 37.500 10.40 0.13 41.42 3.85
122 123 7.578458 AAAATAGACCCTTTAAGGTGAGGTA 57.422 36.000 10.40 0.00 41.42 3.08
123 124 6.556974 AATAGACCCTTTAAGGTGAGGTAC 57.443 41.667 10.40 0.00 41.42 3.34
124 125 2.830321 AGACCCTTTAAGGTGAGGTACG 59.170 50.000 10.40 0.00 41.42 3.67
125 126 2.827921 GACCCTTTAAGGTGAGGTACGA 59.172 50.000 10.40 0.00 41.42 3.43
126 127 3.447950 ACCCTTTAAGGTGAGGTACGAT 58.552 45.455 10.40 0.00 39.24 3.73
127 128 3.197116 ACCCTTTAAGGTGAGGTACGATG 59.803 47.826 10.40 0.00 39.24 3.84
128 129 3.195661 CCTTTAAGGTGAGGTACGATGC 58.804 50.000 2.20 0.00 0.00 3.91
129 130 3.369052 CCTTTAAGGTGAGGTACGATGCA 60.369 47.826 2.20 0.00 0.00 3.96
130 131 4.442706 CTTTAAGGTGAGGTACGATGCAT 58.557 43.478 0.00 0.00 0.00 3.96
131 132 5.452776 CCTTTAAGGTGAGGTACGATGCATA 60.453 44.000 0.00 0.00 0.00 3.14
132 133 3.454371 AAGGTGAGGTACGATGCATAC 57.546 47.619 0.00 0.00 0.00 2.39
133 134 1.337071 AGGTGAGGTACGATGCATACG 59.663 52.381 0.00 8.10 0.00 3.06
134 135 1.335810 GGTGAGGTACGATGCATACGA 59.664 52.381 20.36 6.22 34.70 3.43
135 136 2.223641 GGTGAGGTACGATGCATACGAA 60.224 50.000 20.36 0.00 34.70 3.85
136 137 3.441163 GTGAGGTACGATGCATACGAAA 58.559 45.455 20.36 8.91 34.70 3.46
137 138 4.049186 GTGAGGTACGATGCATACGAAAT 58.951 43.478 20.36 5.76 34.70 2.17
138 139 4.506654 GTGAGGTACGATGCATACGAAATT 59.493 41.667 20.36 5.49 34.70 1.82
139 140 4.743151 TGAGGTACGATGCATACGAAATTC 59.257 41.667 20.36 13.68 34.70 2.17
140 141 4.945246 AGGTACGATGCATACGAAATTCT 58.055 39.130 20.36 10.11 34.70 2.40
141 142 4.982916 AGGTACGATGCATACGAAATTCTC 59.017 41.667 20.36 0.00 34.70 2.87
142 143 4.743151 GGTACGATGCATACGAAATTCTCA 59.257 41.667 20.36 0.00 34.70 3.27
143 144 5.405571 GGTACGATGCATACGAAATTCTCAT 59.594 40.000 20.36 2.99 34.70 2.90
144 145 5.991328 ACGATGCATACGAAATTCTCATT 57.009 34.783 20.36 0.00 34.70 2.57
145 146 5.978878 ACGATGCATACGAAATTCTCATTC 58.021 37.500 20.36 0.00 34.70 2.67
146 147 5.523552 ACGATGCATACGAAATTCTCATTCA 59.476 36.000 20.36 0.00 34.70 2.57
147 148 6.203530 ACGATGCATACGAAATTCTCATTCAT 59.796 34.615 20.36 0.00 34.70 2.57
148 149 7.384932 ACGATGCATACGAAATTCTCATTCATA 59.615 33.333 20.36 0.00 34.70 2.15
149 150 8.223100 CGATGCATACGAAATTCTCATTCATAA 58.777 33.333 0.00 0.00 0.00 1.90
150 151 9.539139 GATGCATACGAAATTCTCATTCATAAG 57.461 33.333 0.00 0.00 0.00 1.73
151 152 8.437360 TGCATACGAAATTCTCATTCATAAGT 57.563 30.769 0.00 0.00 0.00 2.24
152 153 8.337532 TGCATACGAAATTCTCATTCATAAGTG 58.662 33.333 0.00 0.00 0.00 3.16
153 154 8.338259 GCATACGAAATTCTCATTCATAAGTGT 58.662 33.333 0.00 0.00 0.00 3.55
157 158 9.046296 ACGAAATTCTCATTCATAAGTGTATCC 57.954 33.333 0.00 0.00 0.00 2.59
158 159 8.217115 CGAAATTCTCATTCATAAGTGTATCCG 58.783 37.037 0.00 0.00 0.00 4.18
159 160 8.964476 AAATTCTCATTCATAAGTGTATCCGT 57.036 30.769 0.00 0.00 0.00 4.69
160 161 8.964476 AATTCTCATTCATAAGTGTATCCGTT 57.036 30.769 0.00 0.00 0.00 4.44
161 162 8.594881 ATTCTCATTCATAAGTGTATCCGTTC 57.405 34.615 0.00 0.00 0.00 3.95
162 163 7.107639 TCTCATTCATAAGTGTATCCGTTCA 57.892 36.000 0.00 0.00 0.00 3.18
163 164 7.203218 TCTCATTCATAAGTGTATCCGTTCAG 58.797 38.462 0.00 0.00 0.00 3.02
164 165 6.873997 TCATTCATAAGTGTATCCGTTCAGT 58.126 36.000 0.00 0.00 0.00 3.41
165 166 6.756542 TCATTCATAAGTGTATCCGTTCAGTG 59.243 38.462 0.00 0.00 0.00 3.66
166 167 5.654603 TCATAAGTGTATCCGTTCAGTGT 57.345 39.130 0.00 0.00 0.00 3.55
167 168 6.762702 TCATAAGTGTATCCGTTCAGTGTA 57.237 37.500 0.00 0.00 0.00 2.90
168 169 7.160547 TCATAAGTGTATCCGTTCAGTGTAA 57.839 36.000 0.00 0.00 0.00 2.41
169 170 7.031372 TCATAAGTGTATCCGTTCAGTGTAAC 58.969 38.462 0.00 0.00 0.00 2.50
182 183 7.994851 GTTCAGTGTAACGAAATTCTCATTC 57.005 36.000 0.00 0.00 45.86 2.67
183 184 7.572759 GTTCAGTGTAACGAAATTCTCATTCA 58.427 34.615 0.00 0.00 45.86 2.57
184 185 7.905604 TCAGTGTAACGAAATTCTCATTCAT 57.094 32.000 0.00 0.00 45.86 2.57
185 186 8.996024 TCAGTGTAACGAAATTCTCATTCATA 57.004 30.769 0.00 0.00 45.86 2.15
186 187 9.430623 TCAGTGTAACGAAATTCTCATTCATAA 57.569 29.630 0.00 0.00 45.86 1.90
187 188 9.694520 CAGTGTAACGAAATTCTCATTCATAAG 57.305 33.333 0.00 0.00 45.86 1.73
188 189 9.436957 AGTGTAACGAAATTCTCATTCATAAGT 57.563 29.630 0.00 0.00 45.86 2.24
189 190 9.478019 GTGTAACGAAATTCTCATTCATAAGTG 57.522 33.333 0.00 0.00 0.00 3.16
190 191 9.214957 TGTAACGAAATTCTCATTCATAAGTGT 57.785 29.630 0.00 0.00 0.00 3.55
194 195 9.046296 ACGAAATTCTCATTCATAAGTGTATCC 57.954 33.333 0.00 0.00 0.00 2.59
195 196 8.217115 CGAAATTCTCATTCATAAGTGTATCCG 58.783 37.037 0.00 0.00 0.00 4.18
196 197 8.964476 AAATTCTCATTCATAAGTGTATCCGT 57.036 30.769 0.00 0.00 0.00 4.69
197 198 8.964476 AATTCTCATTCATAAGTGTATCCGTT 57.036 30.769 0.00 0.00 0.00 4.44
198 199 8.594881 ATTCTCATTCATAAGTGTATCCGTTC 57.405 34.615 0.00 0.00 0.00 3.95
199 200 7.107639 TCTCATTCATAAGTGTATCCGTTCA 57.892 36.000 0.00 0.00 0.00 3.18
200 201 7.203218 TCTCATTCATAAGTGTATCCGTTCAG 58.797 38.462 0.00 0.00 0.00 3.02
201 202 6.873997 TCATTCATAAGTGTATCCGTTCAGT 58.126 36.000 0.00 0.00 0.00 3.41
202 203 6.756542 TCATTCATAAGTGTATCCGTTCAGTG 59.243 38.462 0.00 0.00 0.00 3.66
203 204 5.654603 TCATAAGTGTATCCGTTCAGTGT 57.345 39.130 0.00 0.00 0.00 3.55
204 205 6.762702 TCATAAGTGTATCCGTTCAGTGTA 57.237 37.500 0.00 0.00 0.00 2.90
205 206 6.792326 TCATAAGTGTATCCGTTCAGTGTAG 58.208 40.000 0.00 0.00 0.00 2.74
206 207 3.505464 AGTGTATCCGTTCAGTGTAGC 57.495 47.619 0.00 0.00 0.00 3.58
207 208 2.159421 AGTGTATCCGTTCAGTGTAGCG 60.159 50.000 0.00 0.00 0.00 4.26
208 209 1.814394 TGTATCCGTTCAGTGTAGCGT 59.186 47.619 0.00 0.00 0.00 5.07
209 210 2.159476 TGTATCCGTTCAGTGTAGCGTC 60.159 50.000 0.00 0.00 0.00 5.19
210 211 1.174783 ATCCGTTCAGTGTAGCGTCT 58.825 50.000 0.00 0.00 0.00 4.18
211 212 0.520404 TCCGTTCAGTGTAGCGTCTC 59.480 55.000 0.00 0.00 0.00 3.36
212 213 0.456312 CCGTTCAGTGTAGCGTCTCC 60.456 60.000 0.00 0.00 0.00 3.71
213 214 0.522180 CGTTCAGTGTAGCGTCTCCT 59.478 55.000 0.00 0.00 0.00 3.69
214 215 1.068472 CGTTCAGTGTAGCGTCTCCTT 60.068 52.381 0.00 0.00 0.00 3.36
215 216 2.607282 CGTTCAGTGTAGCGTCTCCTTT 60.607 50.000 0.00 0.00 0.00 3.11
216 217 2.724977 TCAGTGTAGCGTCTCCTTTG 57.275 50.000 0.00 0.00 0.00 2.77
217 218 1.071605 CAGTGTAGCGTCTCCTTTGC 58.928 55.000 0.00 0.00 0.00 3.68
218 219 0.969894 AGTGTAGCGTCTCCTTTGCT 59.030 50.000 0.00 0.00 42.58 3.91
219 220 1.344763 AGTGTAGCGTCTCCTTTGCTT 59.655 47.619 0.00 0.00 40.06 3.91
220 221 2.561419 AGTGTAGCGTCTCCTTTGCTTA 59.439 45.455 0.00 0.00 40.06 3.09
221 222 2.666994 GTGTAGCGTCTCCTTTGCTTAC 59.333 50.000 0.00 0.00 40.06 2.34
222 223 2.561419 TGTAGCGTCTCCTTTGCTTACT 59.439 45.455 0.00 0.00 40.06 2.24
223 224 2.371910 AGCGTCTCCTTTGCTTACTC 57.628 50.000 0.00 0.00 34.80 2.59
224 225 1.896465 AGCGTCTCCTTTGCTTACTCT 59.104 47.619 0.00 0.00 34.80 3.24
225 226 1.996191 GCGTCTCCTTTGCTTACTCTG 59.004 52.381 0.00 0.00 0.00 3.35
226 227 2.610727 GCGTCTCCTTTGCTTACTCTGT 60.611 50.000 0.00 0.00 0.00 3.41
227 228 3.654414 CGTCTCCTTTGCTTACTCTGTT 58.346 45.455 0.00 0.00 0.00 3.16
228 229 3.430218 CGTCTCCTTTGCTTACTCTGTTG 59.570 47.826 0.00 0.00 0.00 3.33
229 230 4.381411 GTCTCCTTTGCTTACTCTGTTGT 58.619 43.478 0.00 0.00 0.00 3.32
230 231 4.212214 GTCTCCTTTGCTTACTCTGTTGTG 59.788 45.833 0.00 0.00 0.00 3.33
231 232 2.878406 TCCTTTGCTTACTCTGTTGTGC 59.122 45.455 0.00 0.00 0.00 4.57
232 233 2.030805 CCTTTGCTTACTCTGTTGTGCC 60.031 50.000 0.00 0.00 0.00 5.01
233 234 2.638480 TTGCTTACTCTGTTGTGCCT 57.362 45.000 0.00 0.00 0.00 4.75
234 235 2.169832 TGCTTACTCTGTTGTGCCTC 57.830 50.000 0.00 0.00 0.00 4.70
235 236 1.071605 GCTTACTCTGTTGTGCCTCG 58.928 55.000 0.00 0.00 0.00 4.63
236 237 1.605712 GCTTACTCTGTTGTGCCTCGT 60.606 52.381 0.00 0.00 0.00 4.18
237 238 2.755650 CTTACTCTGTTGTGCCTCGTT 58.244 47.619 0.00 0.00 0.00 3.85
238 239 2.902705 TACTCTGTTGTGCCTCGTTT 57.097 45.000 0.00 0.00 0.00 3.60
239 240 1.299541 ACTCTGTTGTGCCTCGTTTG 58.700 50.000 0.00 0.00 0.00 2.93
240 241 1.299541 CTCTGTTGTGCCTCGTTTGT 58.700 50.000 0.00 0.00 0.00 2.83
241 242 2.159014 ACTCTGTTGTGCCTCGTTTGTA 60.159 45.455 0.00 0.00 0.00 2.41
242 243 2.869801 CTCTGTTGTGCCTCGTTTGTAA 59.130 45.455 0.00 0.00 0.00 2.41
243 244 3.472652 TCTGTTGTGCCTCGTTTGTAAT 58.527 40.909 0.00 0.00 0.00 1.89
244 245 4.633175 TCTGTTGTGCCTCGTTTGTAATA 58.367 39.130 0.00 0.00 0.00 0.98
245 246 5.057819 TCTGTTGTGCCTCGTTTGTAATAA 58.942 37.500 0.00 0.00 0.00 1.40
246 247 5.527951 TCTGTTGTGCCTCGTTTGTAATAAA 59.472 36.000 0.00 0.00 0.00 1.40
247 248 6.205853 TCTGTTGTGCCTCGTTTGTAATAAAT 59.794 34.615 0.00 0.00 0.00 1.40
248 249 6.740110 TGTTGTGCCTCGTTTGTAATAAATT 58.260 32.000 0.00 0.00 0.00 1.82
249 250 7.872881 TGTTGTGCCTCGTTTGTAATAAATTA 58.127 30.769 0.00 0.00 0.00 1.40
250 251 8.018520 TGTTGTGCCTCGTTTGTAATAAATTAG 58.981 33.333 0.00 0.00 0.00 1.73
251 252 6.548171 TGTGCCTCGTTTGTAATAAATTAGC 58.452 36.000 0.00 0.00 0.00 3.09
252 253 6.373216 TGTGCCTCGTTTGTAATAAATTAGCT 59.627 34.615 0.00 0.00 0.00 3.32
253 254 6.905609 GTGCCTCGTTTGTAATAAATTAGCTC 59.094 38.462 0.00 0.00 0.00 4.09
254 255 6.596106 TGCCTCGTTTGTAATAAATTAGCTCA 59.404 34.615 0.00 0.00 0.00 4.26
255 256 7.119992 TGCCTCGTTTGTAATAAATTAGCTCAA 59.880 33.333 0.00 0.00 0.00 3.02
256 257 7.428472 GCCTCGTTTGTAATAAATTAGCTCAAC 59.572 37.037 0.00 0.00 0.00 3.18
257 258 8.665685 CCTCGTTTGTAATAAATTAGCTCAACT 58.334 33.333 0.00 0.00 0.00 3.16
259 260 9.820229 TCGTTTGTAATAAATTAGCTCAACTTG 57.180 29.630 0.00 0.00 0.00 3.16
260 261 8.575454 CGTTTGTAATAAATTAGCTCAACTTGC 58.425 33.333 0.00 0.00 0.00 4.01
261 262 9.626045 GTTTGTAATAAATTAGCTCAACTTGCT 57.374 29.630 0.00 0.00 43.79 3.91
262 263 9.624697 TTTGTAATAAATTAGCTCAACTTGCTG 57.375 29.630 0.00 0.00 41.32 4.41
263 264 7.250569 TGTAATAAATTAGCTCAACTTGCTGC 58.749 34.615 0.00 0.00 41.32 5.25
264 265 2.907910 AATTAGCTCAACTTGCTGCG 57.092 45.000 0.00 0.00 41.32 5.18
265 266 2.099141 ATTAGCTCAACTTGCTGCGA 57.901 45.000 0.00 0.00 41.32 5.10
266 267 2.099141 TTAGCTCAACTTGCTGCGAT 57.901 45.000 0.00 0.00 41.32 4.58
267 268 1.362768 TAGCTCAACTTGCTGCGATG 58.637 50.000 0.00 0.00 41.32 3.84
268 269 1.136147 GCTCAACTTGCTGCGATGG 59.864 57.895 0.00 0.00 0.00 3.51
269 270 1.798735 CTCAACTTGCTGCGATGGG 59.201 57.895 0.00 0.00 0.00 4.00
270 271 0.674581 CTCAACTTGCTGCGATGGGA 60.675 55.000 0.00 0.00 0.00 4.37
271 272 0.250684 TCAACTTGCTGCGATGGGAA 60.251 50.000 0.00 0.00 0.00 3.97
272 273 0.169672 CAACTTGCTGCGATGGGAAG 59.830 55.000 0.00 0.00 37.96 3.46
273 274 0.250901 AACTTGCTGCGATGGGAAGT 60.251 50.000 0.00 4.43 44.83 3.01
274 275 0.674895 ACTTGCTGCGATGGGAAGTC 60.675 55.000 0.00 0.00 40.37 3.01
275 276 1.699656 CTTGCTGCGATGGGAAGTCG 61.700 60.000 0.00 0.00 41.77 4.18
276 277 2.125512 GCTGCGATGGGAAGTCGT 60.126 61.111 0.00 0.00 40.98 4.34
277 278 2.456119 GCTGCGATGGGAAGTCGTG 61.456 63.158 0.00 0.00 40.98 4.35
278 279 1.215382 CTGCGATGGGAAGTCGTGA 59.785 57.895 0.00 0.00 40.98 4.35
279 280 0.389817 CTGCGATGGGAAGTCGTGAA 60.390 55.000 0.00 0.00 40.98 3.18
280 281 0.669318 TGCGATGGGAAGTCGTGAAC 60.669 55.000 0.00 0.00 40.98 3.18
281 282 0.389948 GCGATGGGAAGTCGTGAACT 60.390 55.000 0.00 0.00 40.98 3.01
282 283 1.135199 GCGATGGGAAGTCGTGAACTA 60.135 52.381 0.00 0.00 40.98 2.24
283 284 2.798680 CGATGGGAAGTCGTGAACTAG 58.201 52.381 0.00 0.00 37.17 2.57
284 285 2.163815 CGATGGGAAGTCGTGAACTAGT 59.836 50.000 0.00 0.00 37.17 2.57
285 286 3.512680 GATGGGAAGTCGTGAACTAGTG 58.487 50.000 0.00 0.00 37.17 2.74
286 287 2.589720 TGGGAAGTCGTGAACTAGTGA 58.410 47.619 0.00 0.00 37.17 3.41
287 288 2.960384 TGGGAAGTCGTGAACTAGTGAA 59.040 45.455 0.00 0.00 37.17 3.18
288 289 3.243636 TGGGAAGTCGTGAACTAGTGAAC 60.244 47.826 0.00 0.00 37.17 3.18
289 290 3.315418 GGAAGTCGTGAACTAGTGAACC 58.685 50.000 0.00 0.00 37.17 3.62
290 291 2.701073 AGTCGTGAACTAGTGAACCG 57.299 50.000 0.00 0.00 36.07 4.44
291 292 1.952296 AGTCGTGAACTAGTGAACCGT 59.048 47.619 0.00 0.00 36.07 4.83
292 293 3.141398 AGTCGTGAACTAGTGAACCGTA 58.859 45.455 0.00 0.00 36.07 4.02
293 294 3.188048 AGTCGTGAACTAGTGAACCGTAG 59.812 47.826 0.00 0.00 36.07 3.51
306 307 3.474000 CGTAGGGTGTGGTTGGGA 58.526 61.111 0.00 0.00 0.00 4.37
307 308 1.756024 CGTAGGGTGTGGTTGGGAA 59.244 57.895 0.00 0.00 0.00 3.97
308 309 0.604511 CGTAGGGTGTGGTTGGGAAC 60.605 60.000 0.00 0.00 0.00 3.62
328 329 7.664758 GGGAACCGTAGACTATGTAAATATGT 58.335 38.462 1.09 0.00 40.86 2.29
329 330 8.146412 GGGAACCGTAGACTATGTAAATATGTT 58.854 37.037 1.09 0.00 40.86 2.71
330 331 8.975439 GGAACCGTAGACTATGTAAATATGTTG 58.025 37.037 1.09 0.00 0.00 3.33
331 332 8.882415 AACCGTAGACTATGTAAATATGTTGG 57.118 34.615 1.09 0.00 0.00 3.77
332 333 8.015185 ACCGTAGACTATGTAAATATGTTGGT 57.985 34.615 1.09 0.00 0.00 3.67
333 334 7.924412 ACCGTAGACTATGTAAATATGTTGGTG 59.076 37.037 1.09 0.00 0.00 4.17
334 335 7.924412 CCGTAGACTATGTAAATATGTTGGTGT 59.076 37.037 1.09 0.00 0.00 4.16
335 336 8.752254 CGTAGACTATGTAAATATGTTGGTGTG 58.248 37.037 0.00 0.00 0.00 3.82
336 337 9.042008 GTAGACTATGTAAATATGTTGGTGTGG 57.958 37.037 0.00 0.00 0.00 4.17
337 338 7.054124 AGACTATGTAAATATGTTGGTGTGGG 58.946 38.462 0.00 0.00 0.00 4.61
338 339 6.727394 ACTATGTAAATATGTTGGTGTGGGT 58.273 36.000 0.00 0.00 0.00 4.51
339 340 5.913137 ATGTAAATATGTTGGTGTGGGTG 57.087 39.130 0.00 0.00 0.00 4.61
340 341 4.730966 TGTAAATATGTTGGTGTGGGTGT 58.269 39.130 0.00 0.00 0.00 4.16
341 342 5.877491 TGTAAATATGTTGGTGTGGGTGTA 58.123 37.500 0.00 0.00 0.00 2.90
342 343 5.706369 TGTAAATATGTTGGTGTGGGTGTAC 59.294 40.000 0.00 0.00 0.00 2.90
343 344 2.863132 TATGTTGGTGTGGGTGTACC 57.137 50.000 0.00 0.00 40.81 3.34
344 345 1.145571 ATGTTGGTGTGGGTGTACCT 58.854 50.000 0.44 0.00 41.11 3.08
345 346 1.803866 TGTTGGTGTGGGTGTACCTA 58.196 50.000 0.44 0.00 41.11 3.08
346 347 1.417145 TGTTGGTGTGGGTGTACCTAC 59.583 52.381 10.28 10.28 46.39 3.18
354 355 4.216411 GTGGGTGTACCTACAATGATGT 57.784 45.455 12.07 0.00 45.62 3.06
355 356 4.585879 GTGGGTGTACCTACAATGATGTT 58.414 43.478 12.07 0.00 45.62 2.71
356 357 4.634443 GTGGGTGTACCTACAATGATGTTC 59.366 45.833 12.07 0.00 45.62 3.18
357 358 3.869246 GGGTGTACCTACAATGATGTTCG 59.131 47.826 0.44 0.00 41.05 3.95
358 359 3.308866 GGTGTACCTACAATGATGTTCGC 59.691 47.826 0.00 0.00 41.05 4.70
359 360 3.930229 GTGTACCTACAATGATGTTCGCA 59.070 43.478 0.00 0.00 41.05 5.10
360 361 4.570772 GTGTACCTACAATGATGTTCGCAT 59.429 41.667 0.00 0.00 41.05 4.73
361 362 4.808895 TGTACCTACAATGATGTTCGCATC 59.191 41.667 1.03 1.03 42.45 3.91
362 363 6.466799 TGTACCTACAATGATGTTCGCATCG 61.467 44.000 3.58 0.00 43.65 3.84
369 370 0.043310 GATGTTCGCATCGTTACGGC 60.043 55.000 4.53 0.00 43.72 5.68
370 371 0.459585 ATGTTCGCATCGTTACGGCT 60.460 50.000 4.53 0.00 30.78 5.52
371 372 0.668096 TGTTCGCATCGTTACGGCTT 60.668 50.000 4.53 0.00 0.00 4.35
372 373 0.441145 GTTCGCATCGTTACGGCTTT 59.559 50.000 4.53 0.00 0.00 3.51
373 374 0.440758 TTCGCATCGTTACGGCTTTG 59.559 50.000 4.53 0.00 0.00 2.77
374 375 1.060308 CGCATCGTTACGGCTTTGG 59.940 57.895 4.53 0.00 0.00 3.28
375 376 1.226295 GCATCGTTACGGCTTTGGC 60.226 57.895 4.53 0.00 37.82 4.52
383 384 4.278956 CGGCTTTGGCGTACTCTT 57.721 55.556 5.37 0.00 46.33 2.85
384 385 1.787847 CGGCTTTGGCGTACTCTTG 59.212 57.895 5.37 0.00 46.33 3.02
385 386 0.949105 CGGCTTTGGCGTACTCTTGT 60.949 55.000 5.37 0.00 46.33 3.16
386 387 1.670674 CGGCTTTGGCGTACTCTTGTA 60.671 52.381 5.37 0.00 46.33 2.41
387 388 2.419667 GGCTTTGGCGTACTCTTGTAA 58.580 47.619 0.00 0.00 39.81 2.41
388 389 2.809696 GGCTTTGGCGTACTCTTGTAAA 59.190 45.455 0.00 0.00 39.81 2.01
389 390 3.251487 GGCTTTGGCGTACTCTTGTAAAA 59.749 43.478 0.00 0.00 39.81 1.52
390 391 4.261280 GGCTTTGGCGTACTCTTGTAAAAA 60.261 41.667 0.00 0.00 39.81 1.94
410 411 4.685169 AAAAATCCTGTGTAGCATCGTG 57.315 40.909 0.00 0.00 0.00 4.35
411 412 3.610040 AAATCCTGTGTAGCATCGTGA 57.390 42.857 0.00 0.00 0.00 4.35
412 413 2.879002 ATCCTGTGTAGCATCGTGAG 57.121 50.000 0.00 0.00 0.00 3.51
422 423 8.732072 CTGTGTAGCATCGTGAGAATAACACAA 61.732 40.741 0.00 0.00 44.77 3.33
429 430 6.864560 TCGTGAGAATAACACAATACGAAG 57.135 37.500 0.00 0.00 36.53 3.79
430 431 5.803461 TCGTGAGAATAACACAATACGAAGG 59.197 40.000 0.00 0.00 36.53 3.46
431 432 5.005394 CGTGAGAATAACACAATACGAAGGG 59.995 44.000 0.00 0.00 32.58 3.95
432 433 6.103997 GTGAGAATAACACAATACGAAGGGA 58.896 40.000 0.00 0.00 0.00 4.20
433 434 6.255887 GTGAGAATAACACAATACGAAGGGAG 59.744 42.308 0.00 0.00 0.00 4.30
434 435 6.070995 TGAGAATAACACAATACGAAGGGAGT 60.071 38.462 0.00 0.00 0.00 3.85
435 436 6.338937 AGAATAACACAATACGAAGGGAGTC 58.661 40.000 0.00 0.00 0.00 3.36
436 437 5.670792 ATAACACAATACGAAGGGAGTCA 57.329 39.130 0.00 0.00 0.00 3.41
437 438 4.345859 AACACAATACGAAGGGAGTCAA 57.654 40.909 0.00 0.00 0.00 3.18
438 439 4.345859 ACACAATACGAAGGGAGTCAAA 57.654 40.909 0.00 0.00 0.00 2.69
439 440 4.315803 ACACAATACGAAGGGAGTCAAAG 58.684 43.478 0.00 0.00 0.00 2.77
440 441 3.684788 CACAATACGAAGGGAGTCAAAGG 59.315 47.826 0.00 0.00 0.00 3.11
441 442 3.581332 ACAATACGAAGGGAGTCAAAGGA 59.419 43.478 0.00 0.00 0.00 3.36
442 443 4.184629 CAATACGAAGGGAGTCAAAGGAG 58.815 47.826 0.00 0.00 0.00 3.69
443 444 1.718280 ACGAAGGGAGTCAAAGGAGT 58.282 50.000 0.00 0.00 0.00 3.85
444 445 1.619332 ACGAAGGGAGTCAAAGGAGTC 59.381 52.381 0.00 0.00 41.84 3.36
445 446 1.618837 CGAAGGGAGTCAAAGGAGTCA 59.381 52.381 0.00 0.00 43.92 3.41
446 447 2.610727 CGAAGGGAGTCAAAGGAGTCAC 60.611 54.545 0.00 0.00 45.59 3.67
450 451 4.618920 GGGAGTCAAAGGAGTCACTAAA 57.381 45.455 0.00 0.00 42.56 1.85
451 452 4.969484 GGGAGTCAAAGGAGTCACTAAAA 58.031 43.478 0.00 0.00 42.56 1.52
452 453 4.755629 GGGAGTCAAAGGAGTCACTAAAAC 59.244 45.833 0.00 0.00 42.56 2.43
453 454 4.755629 GGAGTCAAAGGAGTCACTAAAACC 59.244 45.833 0.00 0.00 43.92 3.27
458 459 6.542735 GTCAAAGGAGTCACTAAAACCTTCTT 59.457 38.462 0.00 0.00 39.59 2.52
493 494 2.750350 CTCCGTTCCTGGGTTGCT 59.250 61.111 0.00 0.00 0.00 3.91
543 544 0.574922 CAAACGCCCAAAAGAAACGC 59.425 50.000 0.00 0.00 0.00 4.84
544 545 0.458260 AAACGCCCAAAAGAAACGCT 59.542 45.000 0.00 0.00 0.00 5.07
567 568 2.173382 GCACCGACGCACATGAAC 59.827 61.111 0.00 0.00 0.00 3.18
571 572 0.602638 ACCGACGCACATGAACACAT 60.603 50.000 0.00 0.00 0.00 3.21
572 573 0.095245 CCGACGCACATGAACACATC 59.905 55.000 0.00 0.00 0.00 3.06
573 574 0.095245 CGACGCACATGAACACATCC 59.905 55.000 0.00 0.00 0.00 3.51
574 575 0.095245 GACGCACATGAACACATCCG 59.905 55.000 0.00 0.00 0.00 4.18
575 576 0.320334 ACGCACATGAACACATCCGA 60.320 50.000 0.00 0.00 0.00 4.55
576 577 1.009078 CGCACATGAACACATCCGAT 58.991 50.000 0.00 0.00 0.00 4.18
577 578 1.004610 CGCACATGAACACATCCGATC 60.005 52.381 0.00 0.00 0.00 3.69
578 579 2.283298 GCACATGAACACATCCGATCT 58.717 47.619 0.00 0.00 0.00 2.75
579 580 3.457234 GCACATGAACACATCCGATCTA 58.543 45.455 0.00 0.00 0.00 1.98
580 581 3.246226 GCACATGAACACATCCGATCTAC 59.754 47.826 0.00 0.00 0.00 2.59
581 582 4.432712 CACATGAACACATCCGATCTACA 58.567 43.478 0.00 0.00 0.00 2.74
582 583 4.869861 CACATGAACACATCCGATCTACAA 59.130 41.667 0.00 0.00 0.00 2.41
583 584 5.006068 CACATGAACACATCCGATCTACAAG 59.994 44.000 0.00 0.00 0.00 3.16
584 585 4.123497 TGAACACATCCGATCTACAAGG 57.877 45.455 0.00 0.00 0.00 3.61
585 586 3.118775 TGAACACATCCGATCTACAAGGG 60.119 47.826 0.00 0.00 0.00 3.95
586 587 2.747177 ACACATCCGATCTACAAGGGA 58.253 47.619 0.00 0.00 0.00 4.20
587 588 2.695666 ACACATCCGATCTACAAGGGAG 59.304 50.000 0.00 0.00 30.92 4.30
588 589 1.689273 ACATCCGATCTACAAGGGAGC 59.311 52.381 0.00 0.00 30.92 4.70
589 590 0.962489 ATCCGATCTACAAGGGAGCG 59.038 55.000 0.00 0.00 41.40 5.03
591 592 1.300233 CGATCTACAAGGGAGCGGC 60.300 63.158 0.00 0.00 38.66 6.53
592 593 1.069935 GATCTACAAGGGAGCGGCC 59.930 63.158 0.00 0.00 0.00 6.13
593 594 2.701163 GATCTACAAGGGAGCGGCCG 62.701 65.000 24.05 24.05 37.63 6.13
594 595 3.771160 CTACAAGGGAGCGGCCGT 61.771 66.667 28.70 13.92 37.63 5.68
595 596 2.362760 TACAAGGGAGCGGCCGTA 60.363 61.111 28.70 5.24 37.63 4.02
596 597 1.952102 CTACAAGGGAGCGGCCGTAA 61.952 60.000 28.70 0.83 37.63 3.18
597 598 2.229690 TACAAGGGAGCGGCCGTAAC 62.230 60.000 28.70 17.54 37.63 2.50
598 599 4.446413 AAGGGAGCGGCCGTAACG 62.446 66.667 28.70 0.00 37.63 3.18
600 601 4.217159 GGGAGCGGCCGTAACGAT 62.217 66.667 28.70 5.89 37.63 3.73
672 675 2.434428 CCGTACCGGCTAGTATCATCT 58.566 52.381 0.00 0.00 41.17 2.90
680 683 9.122779 GTACCGGCTAGTATCATCTTATTCTAT 57.877 37.037 0.00 0.00 0.00 1.98
745 748 1.953686 CGCAATTTCATATTCCCCGGT 59.046 47.619 0.00 0.00 0.00 5.28
774 777 2.435059 GCTGACTTCCTCCGCACC 60.435 66.667 0.00 0.00 0.00 5.01
915 924 1.827789 AAGGCGCTTCTGGCACAAA 60.828 52.632 7.64 0.00 41.91 2.83
1491 1500 4.509737 GCCGGCGACCACTACCTC 62.510 72.222 12.58 0.00 0.00 3.85
1707 1716 2.519780 GAGATCCCGCTCTCCCGT 60.520 66.667 0.00 0.00 36.47 5.28
1758 1767 0.398318 ACCCTGAGCTCCTCAACAAC 59.602 55.000 12.15 0.00 40.18 3.32
1818 1827 2.317609 CCGAAACTGCCAGTGGTCG 61.318 63.158 19.13 19.13 36.74 4.79
1971 1980 1.260538 TGCTGCTCACGGAGAAGGAT 61.261 55.000 10.00 0.00 35.91 3.24
2217 2226 1.970114 CAACCAGGTGCTCAGGCTG 60.970 63.158 8.58 8.58 39.59 4.85
2353 2365 3.532542 ACTTAAGTGGCTAATCCTTCGC 58.467 45.455 7.48 0.00 35.26 4.70
2460 2474 5.330233 TGAACACAGGACAGGAGTAATAGA 58.670 41.667 0.00 0.00 0.00 1.98
2486 2500 4.155462 TGCTGCAGATTGTCAATCTCTTTC 59.845 41.667 22.67 13.70 46.20 2.62
2544 2558 7.652727 AGAGTTCTGAAGCTTATTTTTGTTCC 58.347 34.615 0.00 0.00 0.00 3.62
2550 2564 8.299570 TCTGAAGCTTATTTTTGTTCCAAGATC 58.700 33.333 0.00 0.00 0.00 2.75
2589 2606 5.880054 ACCTCGAGTTAAATGGTTTCATG 57.120 39.130 12.31 0.00 33.18 3.07
2615 2632 3.211045 ACGAGTATTTGTGGTGCACTTT 58.789 40.909 17.98 0.00 35.11 2.66
2668 2685 2.100916 TCCTGCACTAGATTAGGAACGC 59.899 50.000 0.00 0.00 36.44 4.84
2675 2692 6.257849 TGCACTAGATTAGGAACGCAAAATAG 59.742 38.462 0.00 0.00 0.00 1.73
2687 2704 7.339466 AGGAACGCAAAATAGGTTTTAGATCAT 59.661 33.333 0.00 0.00 35.83 2.45
2694 2711 6.604735 AATAGGTTTTAGATCATGCGTCAC 57.395 37.500 0.00 0.00 0.00 3.67
2706 2723 2.935955 CGTCACGGTGCTTGGTTC 59.064 61.111 2.51 0.00 0.00 3.62
2722 2739 5.667644 GCTTGGTTCAAAACAAACAACGAAG 60.668 40.000 0.00 0.00 37.52 3.79
2800 2817 6.442541 TTTTTAGGGTGTGGTTAGATCTCA 57.557 37.500 0.00 0.00 0.00 3.27
2801 2818 5.677319 TTTAGGGTGTGGTTAGATCTCAG 57.323 43.478 0.00 0.00 0.00 3.35
2803 2820 3.100671 AGGGTGTGGTTAGATCTCAGTC 58.899 50.000 0.00 0.00 0.00 3.51
2805 2822 2.492484 GGTGTGGTTAGATCTCAGTCGT 59.508 50.000 0.00 0.00 0.00 4.34
2807 2824 3.440872 GTGTGGTTAGATCTCAGTCGTCT 59.559 47.826 0.00 0.00 0.00 4.18
2808 2825 3.690139 TGTGGTTAGATCTCAGTCGTCTC 59.310 47.826 0.00 0.00 0.00 3.36
2809 2826 2.937149 TGGTTAGATCTCAGTCGTCTCG 59.063 50.000 0.00 0.00 0.00 4.04
2816 2833 0.455295 CTCAGTCGTCTCGGTCAAGC 60.455 60.000 0.00 0.00 0.00 4.01
2885 2902 3.975670 GGATCTGCACGTAAGATCTAACG 59.024 47.826 26.95 0.00 46.21 3.18
2890 2907 6.197276 TCTGCACGTAAGATCTAACGAATAC 58.803 40.000 0.00 0.00 41.55 1.89
2893 2910 5.108330 GCACGTAAGATCTAACGAATACAGC 60.108 44.000 0.00 0.00 41.55 4.40
2897 2914 7.078851 CGTAAGATCTAACGAATACAGCATCT 58.921 38.462 0.00 0.00 41.55 2.90
2901 2918 8.978564 AGATCTAACGAATACAGCATCTATTG 57.021 34.615 0.00 0.00 0.00 1.90
2905 2922 8.076781 TCTAACGAATACAGCATCTATTGAGAC 58.923 37.037 0.00 0.00 33.41 3.36
2908 2925 6.920758 ACGAATACAGCATCTATTGAGACTTC 59.079 38.462 0.00 0.00 33.41 3.01
3077 3101 1.423395 CTTGCCACGTCTCTCAACTC 58.577 55.000 0.00 0.00 0.00 3.01
3081 3105 0.315251 CCACGTCTCTCAACTCTGCA 59.685 55.000 0.00 0.00 0.00 4.41
3087 3111 0.248843 CTCTCAACTCTGCACCCTCC 59.751 60.000 0.00 0.00 0.00 4.30
3089 3113 1.461268 TCAACTCTGCACCCTCCCA 60.461 57.895 0.00 0.00 0.00 4.37
3094 3118 3.721706 CTGCACCCTCCCACCCTC 61.722 72.222 0.00 0.00 0.00 4.30
3098 3122 3.552911 ACCCTCCCACCCTCCCTT 61.553 66.667 0.00 0.00 0.00 3.95
3105 3129 3.322466 CACCCTCCCTTCGCCACT 61.322 66.667 0.00 0.00 0.00 4.00
3159 3183 2.741092 GCACGTCCCTCCTTCACA 59.259 61.111 0.00 0.00 0.00 3.58
3164 3188 1.021390 CGTCCCTCCTTCACATGTGC 61.021 60.000 21.38 2.70 0.00 4.57
3166 3190 0.036732 TCCCTCCTTCACATGTGCAC 59.963 55.000 21.38 10.75 0.00 4.57
3174 3198 2.252976 TCACATGTGCACAACTAGCA 57.747 45.000 25.72 2.94 40.19 3.49
3196 3220 2.116238 GGGGTGGCACATCTAGTTAGA 58.884 52.381 20.82 0.00 44.52 2.10
3220 3244 3.555324 GAGCTAGGGCAGGGCTCC 61.555 72.222 11.83 0.00 44.46 4.70
3258 3282 0.804364 CGTCCCAATGATGTGTGTGG 59.196 55.000 0.00 0.00 0.00 4.17
3260 3284 2.582272 CCCAATGATGTGTGTGGGG 58.418 57.895 0.00 0.00 46.04 4.96
3266 3290 2.203625 ATGTGTGTGGGGGTTGGC 60.204 61.111 0.00 0.00 0.00 4.52
3268 3292 4.887190 GTGTGTGGGGGTTGGCGT 62.887 66.667 0.00 0.00 0.00 5.68
3302 3326 1.377987 GCCGATTTGTGGTGGCCTA 60.378 57.895 3.32 0.00 41.70 3.93
3321 3345 0.851469 AGTCCTACCTGGCCGATCTA 59.149 55.000 0.00 0.00 35.26 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.626266 ACAACACACCTGTCTATGACGA 59.374 45.455 0.00 0.00 34.95 4.20
1 2 3.026630 ACAACACACCTGTCTATGACG 57.973 47.619 0.00 0.00 34.95 4.35
3 4 5.538849 TGTAACAACACACCTGTCTATGA 57.461 39.130 0.00 0.00 0.00 2.15
4 5 6.204688 ACATTGTAACAACACACCTGTCTATG 59.795 38.462 0.00 0.00 0.00 2.23
5 6 6.296026 ACATTGTAACAACACACCTGTCTAT 58.704 36.000 0.00 0.00 0.00 1.98
6 7 5.676552 ACATTGTAACAACACACCTGTCTA 58.323 37.500 0.00 0.00 0.00 2.59
7 8 4.523083 ACATTGTAACAACACACCTGTCT 58.477 39.130 0.00 0.00 0.00 3.41
8 9 4.261031 GGACATTGTAACAACACACCTGTC 60.261 45.833 0.00 0.00 38.94 3.51
9 10 3.630312 GGACATTGTAACAACACACCTGT 59.370 43.478 0.00 0.00 30.92 4.00
10 11 3.629855 TGGACATTGTAACAACACACCTG 59.370 43.478 0.00 0.00 0.00 4.00
11 12 3.882888 CTGGACATTGTAACAACACACCT 59.117 43.478 0.00 0.00 0.00 4.00
12 13 3.880490 TCTGGACATTGTAACAACACACC 59.120 43.478 0.00 0.00 0.00 4.16
13 14 4.814234 TCTCTGGACATTGTAACAACACAC 59.186 41.667 0.00 0.00 0.00 3.82
14 15 5.029807 TCTCTGGACATTGTAACAACACA 57.970 39.130 0.00 0.00 0.00 3.72
15 16 5.106555 CCATCTCTGGACATTGTAACAACAC 60.107 44.000 0.00 0.00 46.37 3.32
16 17 5.003160 CCATCTCTGGACATTGTAACAACA 58.997 41.667 0.00 0.00 46.37 3.33
17 18 5.003804 ACCATCTCTGGACATTGTAACAAC 58.996 41.667 0.00 0.00 46.37 3.32
18 19 5.241403 ACCATCTCTGGACATTGTAACAA 57.759 39.130 0.00 0.00 46.37 2.83
19 20 4.908601 ACCATCTCTGGACATTGTAACA 57.091 40.909 0.00 0.00 46.37 2.41
20 21 6.206634 TGAAAACCATCTCTGGACATTGTAAC 59.793 38.462 0.00 0.00 46.37 2.50
21 22 6.303054 TGAAAACCATCTCTGGACATTGTAA 58.697 36.000 0.00 0.00 46.37 2.41
22 23 5.875224 TGAAAACCATCTCTGGACATTGTA 58.125 37.500 0.00 0.00 46.37 2.41
23 24 4.728772 TGAAAACCATCTCTGGACATTGT 58.271 39.130 0.00 0.00 46.37 2.71
24 25 5.710513 TTGAAAACCATCTCTGGACATTG 57.289 39.130 0.00 0.00 46.37 2.82
25 26 6.295462 CCAATTGAAAACCATCTCTGGACATT 60.295 38.462 7.12 0.00 46.37 2.71
26 27 5.186409 CCAATTGAAAACCATCTCTGGACAT 59.814 40.000 7.12 0.00 46.37 3.06
27 28 4.523943 CCAATTGAAAACCATCTCTGGACA 59.476 41.667 7.12 0.00 46.37 4.02
28 29 4.524328 ACCAATTGAAAACCATCTCTGGAC 59.476 41.667 7.12 0.00 46.37 4.02
29 30 4.523943 CACCAATTGAAAACCATCTCTGGA 59.476 41.667 7.12 0.00 46.37 3.86
31 32 5.458041 ACACCAATTGAAAACCATCTCTG 57.542 39.130 7.12 0.00 0.00 3.35
32 33 6.098124 TCAAACACCAATTGAAAACCATCTCT 59.902 34.615 7.12 0.00 34.04 3.10
33 34 6.279882 TCAAACACCAATTGAAAACCATCTC 58.720 36.000 7.12 0.00 34.04 2.75
34 35 6.232581 TCAAACACCAATTGAAAACCATCT 57.767 33.333 7.12 0.00 34.04 2.90
35 36 6.917217 TTCAAACACCAATTGAAAACCATC 57.083 33.333 7.12 0.00 42.19 3.51
36 37 7.281841 AGATTCAAACACCAATTGAAAACCAT 58.718 30.769 7.12 0.00 46.46 3.55
37 38 6.648192 AGATTCAAACACCAATTGAAAACCA 58.352 32.000 7.12 0.00 46.46 3.67
38 39 8.831715 ATAGATTCAAACACCAATTGAAAACC 57.168 30.769 7.12 0.41 46.46 3.27
40 41 9.487790 GGAATAGATTCAAACACCAATTGAAAA 57.512 29.630 7.12 0.00 46.46 2.29
41 42 8.646004 TGGAATAGATTCAAACACCAATTGAAA 58.354 29.630 7.12 0.00 46.46 2.69
43 44 7.773489 TGGAATAGATTCAAACACCAATTGA 57.227 32.000 7.12 0.00 38.53 2.57
44 45 8.472413 AGATGGAATAGATTCAAACACCAATTG 58.528 33.333 0.00 0.00 38.53 2.32
45 46 8.599624 AGATGGAATAGATTCAAACACCAATT 57.400 30.769 4.71 0.00 38.53 2.32
46 47 8.472413 CAAGATGGAATAGATTCAAACACCAAT 58.528 33.333 4.71 0.00 38.53 3.16
47 48 7.451255 ACAAGATGGAATAGATTCAAACACCAA 59.549 33.333 4.71 0.00 38.53 3.67
48 49 6.947733 ACAAGATGGAATAGATTCAAACACCA 59.052 34.615 4.71 0.00 38.53 4.17
49 50 7.396540 ACAAGATGGAATAGATTCAAACACC 57.603 36.000 4.71 0.00 38.53 4.16
51 52 9.045223 CGATACAAGATGGAATAGATTCAAACA 57.955 33.333 4.71 0.00 38.53 2.83
52 53 8.499162 CCGATACAAGATGGAATAGATTCAAAC 58.501 37.037 4.71 0.00 38.53 2.93
53 54 8.428852 TCCGATACAAGATGGAATAGATTCAAA 58.571 33.333 4.71 0.00 38.53 2.69
54 55 7.962441 TCCGATACAAGATGGAATAGATTCAA 58.038 34.615 4.71 0.00 38.53 2.69
55 56 7.539034 TCCGATACAAGATGGAATAGATTCA 57.461 36.000 4.71 0.00 38.53 2.57
56 57 9.442047 AAATCCGATACAAGATGGAATAGATTC 57.558 33.333 0.00 0.00 33.48 2.52
57 58 9.224267 CAAATCCGATACAAGATGGAATAGATT 57.776 33.333 0.00 0.00 33.48 2.40
58 59 8.378565 ACAAATCCGATACAAGATGGAATAGAT 58.621 33.333 0.00 0.00 33.48 1.98
59 60 7.657354 CACAAATCCGATACAAGATGGAATAGA 59.343 37.037 0.00 0.00 33.48 1.98
60 61 7.657354 TCACAAATCCGATACAAGATGGAATAG 59.343 37.037 0.00 0.00 33.48 1.73
61 62 7.505258 TCACAAATCCGATACAAGATGGAATA 58.495 34.615 0.00 0.00 33.48 1.75
62 63 6.356556 TCACAAATCCGATACAAGATGGAAT 58.643 36.000 0.00 0.00 33.48 3.01
63 64 5.739959 TCACAAATCCGATACAAGATGGAA 58.260 37.500 0.00 0.00 33.48 3.53
64 65 5.351948 TCACAAATCCGATACAAGATGGA 57.648 39.130 0.00 0.00 34.45 3.41
65 66 5.586243 ACTTCACAAATCCGATACAAGATGG 59.414 40.000 0.00 0.00 0.00 3.51
66 67 6.668541 ACTTCACAAATCCGATACAAGATG 57.331 37.500 0.00 0.00 0.00 2.90
67 68 7.687941 AAACTTCACAAATCCGATACAAGAT 57.312 32.000 0.00 0.00 0.00 2.40
68 69 8.786826 ATAAACTTCACAAATCCGATACAAGA 57.213 30.769 0.00 0.00 0.00 3.02
69 70 9.840427 AAATAAACTTCACAAATCCGATACAAG 57.160 29.630 0.00 0.00 0.00 3.16
70 71 9.834628 GAAATAAACTTCACAAATCCGATACAA 57.165 29.630 0.00 0.00 0.00 2.41
71 72 8.172484 CGAAATAAACTTCACAAATCCGATACA 58.828 33.333 0.00 0.00 0.00 2.29
72 73 8.385111 TCGAAATAAACTTCACAAATCCGATAC 58.615 33.333 0.00 0.00 0.00 2.24
73 74 8.481974 TCGAAATAAACTTCACAAATCCGATA 57.518 30.769 0.00 0.00 0.00 2.92
74 75 7.372451 TCGAAATAAACTTCACAAATCCGAT 57.628 32.000 0.00 0.00 0.00 4.18
75 76 6.788684 TCGAAATAAACTTCACAAATCCGA 57.211 33.333 0.00 0.00 0.00 4.55
76 77 7.845617 TTTCGAAATAAACTTCACAAATCCG 57.154 32.000 6.47 0.00 0.00 4.18
81 82 9.887406 GGTCTATTTTCGAAATAAACTTCACAA 57.113 29.630 12.12 0.00 0.00 3.33
82 83 8.508875 GGGTCTATTTTCGAAATAAACTTCACA 58.491 33.333 12.12 0.00 0.00 3.58
83 84 8.727910 AGGGTCTATTTTCGAAATAAACTTCAC 58.272 33.333 12.12 1.39 0.00 3.18
84 85 8.857694 AGGGTCTATTTTCGAAATAAACTTCA 57.142 30.769 12.12 0.00 0.00 3.02
90 91 9.743581 ACCTTAAAGGGTCTATTTTCGAAATAA 57.256 29.630 12.12 0.00 40.58 1.40
91 92 9.169592 CACCTTAAAGGGTCTATTTTCGAAATA 57.830 33.333 12.12 3.42 40.58 1.40
92 93 7.886446 TCACCTTAAAGGGTCTATTTTCGAAAT 59.114 33.333 12.12 4.87 40.58 2.17
93 94 7.225725 TCACCTTAAAGGGTCTATTTTCGAAA 58.774 34.615 6.47 6.47 40.58 3.46
94 95 6.771573 TCACCTTAAAGGGTCTATTTTCGAA 58.228 36.000 0.00 0.00 40.58 3.71
95 96 6.363167 TCACCTTAAAGGGTCTATTTTCGA 57.637 37.500 0.00 0.00 40.58 3.71
96 97 5.585047 CCTCACCTTAAAGGGTCTATTTTCG 59.415 44.000 0.00 0.00 40.58 3.46
97 98 6.482524 ACCTCACCTTAAAGGGTCTATTTTC 58.517 40.000 0.00 0.00 40.58 2.29
98 99 6.464530 ACCTCACCTTAAAGGGTCTATTTT 57.535 37.500 0.00 0.00 40.58 1.82
99 100 6.351626 CGTACCTCACCTTAAAGGGTCTATTT 60.352 42.308 0.00 0.00 40.58 1.40
100 101 5.128335 CGTACCTCACCTTAAAGGGTCTATT 59.872 44.000 0.00 0.00 40.58 1.73
101 102 4.648307 CGTACCTCACCTTAAAGGGTCTAT 59.352 45.833 0.00 0.00 40.58 1.98
102 103 4.019174 CGTACCTCACCTTAAAGGGTCTA 58.981 47.826 0.00 0.00 40.58 2.59
103 104 2.830321 CGTACCTCACCTTAAAGGGTCT 59.170 50.000 0.00 0.00 40.58 3.85
104 105 2.827921 TCGTACCTCACCTTAAAGGGTC 59.172 50.000 0.00 0.00 40.58 4.46
105 106 2.893424 TCGTACCTCACCTTAAAGGGT 58.107 47.619 0.00 0.00 40.58 4.34
106 107 3.793559 CATCGTACCTCACCTTAAAGGG 58.206 50.000 0.00 0.00 40.58 3.95
107 108 3.195661 GCATCGTACCTCACCTTAAAGG 58.804 50.000 0.00 0.00 42.49 3.11
108 109 3.857052 TGCATCGTACCTCACCTTAAAG 58.143 45.455 0.00 0.00 0.00 1.85
109 110 3.965379 TGCATCGTACCTCACCTTAAA 57.035 42.857 0.00 0.00 0.00 1.52
110 111 4.498513 CGTATGCATCGTACCTCACCTTAA 60.499 45.833 0.19 0.00 0.00 1.85
111 112 3.004002 CGTATGCATCGTACCTCACCTTA 59.996 47.826 0.19 0.00 0.00 2.69
112 113 2.223735 CGTATGCATCGTACCTCACCTT 60.224 50.000 0.19 0.00 0.00 3.50
113 114 1.337071 CGTATGCATCGTACCTCACCT 59.663 52.381 0.19 0.00 0.00 4.00
114 115 1.335810 TCGTATGCATCGTACCTCACC 59.664 52.381 0.19 0.00 0.00 4.02
115 116 2.768833 TCGTATGCATCGTACCTCAC 57.231 50.000 0.19 0.00 0.00 3.51
116 117 3.786516 TTTCGTATGCATCGTACCTCA 57.213 42.857 0.19 0.00 0.00 3.86
117 118 4.982916 AGAATTTCGTATGCATCGTACCTC 59.017 41.667 0.19 4.42 0.00 3.85
118 119 4.945246 AGAATTTCGTATGCATCGTACCT 58.055 39.130 0.19 0.46 0.00 3.08
119 120 4.743151 TGAGAATTTCGTATGCATCGTACC 59.257 41.667 0.19 0.00 0.00 3.34
120 121 5.883328 TGAGAATTTCGTATGCATCGTAC 57.117 39.130 0.19 0.00 0.00 3.67
121 122 6.699642 TGAATGAGAATTTCGTATGCATCGTA 59.300 34.615 0.19 0.00 0.00 3.43
122 123 5.523552 TGAATGAGAATTTCGTATGCATCGT 59.476 36.000 0.19 0.00 0.00 3.73
123 124 5.977731 TGAATGAGAATTTCGTATGCATCG 58.022 37.500 0.19 7.36 0.00 3.84
124 125 9.539139 CTTATGAATGAGAATTTCGTATGCATC 57.461 33.333 0.19 0.00 0.00 3.91
125 126 9.060347 ACTTATGAATGAGAATTTCGTATGCAT 57.940 29.630 3.79 3.79 0.00 3.96
126 127 8.337532 CACTTATGAATGAGAATTTCGTATGCA 58.662 33.333 0.00 0.00 0.00 3.96
127 128 8.338259 ACACTTATGAATGAGAATTTCGTATGC 58.662 33.333 0.00 0.00 0.00 3.14
131 132 9.046296 GGATACACTTATGAATGAGAATTTCGT 57.954 33.333 0.00 0.00 0.00 3.85
132 133 8.217115 CGGATACACTTATGAATGAGAATTTCG 58.783 37.037 0.00 0.00 0.00 3.46
133 134 9.046296 ACGGATACACTTATGAATGAGAATTTC 57.954 33.333 0.00 0.00 0.00 2.17
134 135 8.964476 ACGGATACACTTATGAATGAGAATTT 57.036 30.769 0.00 0.00 0.00 1.82
135 136 8.964476 AACGGATACACTTATGAATGAGAATT 57.036 30.769 0.00 0.00 0.00 2.17
136 137 8.204160 TGAACGGATACACTTATGAATGAGAAT 58.796 33.333 0.00 0.00 0.00 2.40
137 138 7.552459 TGAACGGATACACTTATGAATGAGAA 58.448 34.615 0.00 0.00 0.00 2.87
138 139 7.107639 TGAACGGATACACTTATGAATGAGA 57.892 36.000 0.00 0.00 0.00 3.27
139 140 6.980978 ACTGAACGGATACACTTATGAATGAG 59.019 38.462 0.00 0.00 0.00 2.90
140 141 6.756542 CACTGAACGGATACACTTATGAATGA 59.243 38.462 0.00 0.00 0.00 2.57
141 142 6.535150 ACACTGAACGGATACACTTATGAATG 59.465 38.462 0.00 0.00 0.00 2.67
142 143 6.640518 ACACTGAACGGATACACTTATGAAT 58.359 36.000 0.00 0.00 0.00 2.57
143 144 6.032956 ACACTGAACGGATACACTTATGAA 57.967 37.500 0.00 0.00 0.00 2.57
144 145 5.654603 ACACTGAACGGATACACTTATGA 57.345 39.130 0.00 0.00 0.00 2.15
145 146 6.020916 CGTTACACTGAACGGATACACTTATG 60.021 42.308 0.86 0.00 46.58 1.90
146 147 6.032094 CGTTACACTGAACGGATACACTTAT 58.968 40.000 0.86 0.00 46.58 1.73
147 148 5.393124 CGTTACACTGAACGGATACACTTA 58.607 41.667 0.86 0.00 46.58 2.24
148 149 4.232221 CGTTACACTGAACGGATACACTT 58.768 43.478 0.86 0.00 46.58 3.16
149 150 3.829948 CGTTACACTGAACGGATACACT 58.170 45.455 0.86 0.00 46.58 3.55
158 159 7.572759 TGAATGAGAATTTCGTTACACTGAAC 58.427 34.615 0.00 0.00 35.17 3.18
159 160 7.722795 TGAATGAGAATTTCGTTACACTGAA 57.277 32.000 0.00 0.00 35.17 3.02
160 161 7.905604 ATGAATGAGAATTTCGTTACACTGA 57.094 32.000 0.00 0.00 35.17 3.41
161 162 9.694520 CTTATGAATGAGAATTTCGTTACACTG 57.305 33.333 0.00 0.00 35.17 3.66
162 163 9.436957 ACTTATGAATGAGAATTTCGTTACACT 57.563 29.630 0.00 0.00 35.17 3.55
163 164 9.478019 CACTTATGAATGAGAATTTCGTTACAC 57.522 33.333 0.00 0.00 35.17 2.90
164 165 9.214957 ACACTTATGAATGAGAATTTCGTTACA 57.785 29.630 0.00 0.00 35.17 2.41
168 169 9.046296 GGATACACTTATGAATGAGAATTTCGT 57.954 33.333 0.00 0.00 0.00 3.85
169 170 8.217115 CGGATACACTTATGAATGAGAATTTCG 58.783 37.037 0.00 0.00 0.00 3.46
170 171 9.046296 ACGGATACACTTATGAATGAGAATTTC 57.954 33.333 0.00 0.00 0.00 2.17
171 172 8.964476 ACGGATACACTTATGAATGAGAATTT 57.036 30.769 0.00 0.00 0.00 1.82
172 173 8.964476 AACGGATACACTTATGAATGAGAATT 57.036 30.769 0.00 0.00 0.00 2.17
173 174 8.204160 TGAACGGATACACTTATGAATGAGAAT 58.796 33.333 0.00 0.00 0.00 2.40
174 175 7.552459 TGAACGGATACACTTATGAATGAGAA 58.448 34.615 0.00 0.00 0.00 2.87
175 176 7.107639 TGAACGGATACACTTATGAATGAGA 57.892 36.000 0.00 0.00 0.00 3.27
176 177 6.980978 ACTGAACGGATACACTTATGAATGAG 59.019 38.462 0.00 0.00 0.00 2.90
177 178 6.756542 CACTGAACGGATACACTTATGAATGA 59.243 38.462 0.00 0.00 0.00 2.57
178 179 6.535150 ACACTGAACGGATACACTTATGAATG 59.465 38.462 0.00 0.00 0.00 2.67
179 180 6.640518 ACACTGAACGGATACACTTATGAAT 58.359 36.000 0.00 0.00 0.00 2.57
180 181 6.032956 ACACTGAACGGATACACTTATGAA 57.967 37.500 0.00 0.00 0.00 2.57
181 182 5.654603 ACACTGAACGGATACACTTATGA 57.345 39.130 0.00 0.00 0.00 2.15
182 183 5.459107 GCTACACTGAACGGATACACTTATG 59.541 44.000 0.00 0.00 0.00 1.90
183 184 5.589192 GCTACACTGAACGGATACACTTAT 58.411 41.667 0.00 0.00 0.00 1.73
184 185 4.437794 CGCTACACTGAACGGATACACTTA 60.438 45.833 0.00 0.00 0.00 2.24
185 186 3.672511 CGCTACACTGAACGGATACACTT 60.673 47.826 0.00 0.00 0.00 3.16
186 187 2.159421 CGCTACACTGAACGGATACACT 60.159 50.000 0.00 0.00 0.00 3.55
187 188 2.182825 CGCTACACTGAACGGATACAC 58.817 52.381 0.00 0.00 0.00 2.90
188 189 1.814394 ACGCTACACTGAACGGATACA 59.186 47.619 0.00 0.00 0.00 2.29
189 190 2.097142 AGACGCTACACTGAACGGATAC 59.903 50.000 0.00 0.00 0.00 2.24
190 191 2.353889 GAGACGCTACACTGAACGGATA 59.646 50.000 0.00 0.00 0.00 2.59
191 192 1.132643 GAGACGCTACACTGAACGGAT 59.867 52.381 0.00 0.00 0.00 4.18
192 193 0.520404 GAGACGCTACACTGAACGGA 59.480 55.000 0.00 0.00 0.00 4.69
193 194 0.456312 GGAGACGCTACACTGAACGG 60.456 60.000 0.00 0.00 0.00 4.44
194 195 0.522180 AGGAGACGCTACACTGAACG 59.478 55.000 0.00 0.00 0.00 3.95
195 196 2.726832 AAGGAGACGCTACACTGAAC 57.273 50.000 0.00 0.00 0.00 3.18
196 197 2.866460 GCAAAGGAGACGCTACACTGAA 60.866 50.000 0.00 0.00 0.00 3.02
197 198 1.336887 GCAAAGGAGACGCTACACTGA 60.337 52.381 0.00 0.00 0.00 3.41
198 199 1.071605 GCAAAGGAGACGCTACACTG 58.928 55.000 0.00 0.00 0.00 3.66
199 200 0.969894 AGCAAAGGAGACGCTACACT 59.030 50.000 0.00 0.00 33.25 3.55
200 201 1.797025 AAGCAAAGGAGACGCTACAC 58.203 50.000 0.00 0.00 34.11 2.90
201 202 2.561419 AGTAAGCAAAGGAGACGCTACA 59.439 45.455 0.00 0.00 34.11 2.74
202 203 3.119424 AGAGTAAGCAAAGGAGACGCTAC 60.119 47.826 0.00 0.00 34.11 3.58
203 204 3.090037 AGAGTAAGCAAAGGAGACGCTA 58.910 45.455 0.00 0.00 34.11 4.26
204 205 1.896465 AGAGTAAGCAAAGGAGACGCT 59.104 47.619 0.00 0.00 37.68 5.07
205 206 1.996191 CAGAGTAAGCAAAGGAGACGC 59.004 52.381 0.00 0.00 0.00 5.19
206 207 3.305398 ACAGAGTAAGCAAAGGAGACG 57.695 47.619 0.00 0.00 0.00 4.18
207 208 4.212214 CACAACAGAGTAAGCAAAGGAGAC 59.788 45.833 0.00 0.00 0.00 3.36
208 209 4.380531 CACAACAGAGTAAGCAAAGGAGA 58.619 43.478 0.00 0.00 0.00 3.71
209 210 3.058639 GCACAACAGAGTAAGCAAAGGAG 60.059 47.826 0.00 0.00 0.00 3.69
210 211 2.878406 GCACAACAGAGTAAGCAAAGGA 59.122 45.455 0.00 0.00 0.00 3.36
211 212 2.030805 GGCACAACAGAGTAAGCAAAGG 60.031 50.000 0.00 0.00 0.00 3.11
212 213 2.880890 AGGCACAACAGAGTAAGCAAAG 59.119 45.455 0.00 0.00 0.00 2.77
213 214 2.878406 GAGGCACAACAGAGTAAGCAAA 59.122 45.455 0.00 0.00 0.00 3.68
214 215 2.494059 GAGGCACAACAGAGTAAGCAA 58.506 47.619 0.00 0.00 0.00 3.91
215 216 1.605457 CGAGGCACAACAGAGTAAGCA 60.605 52.381 0.00 0.00 0.00 3.91
216 217 1.071605 CGAGGCACAACAGAGTAAGC 58.928 55.000 0.00 0.00 0.00 3.09
217 218 2.440539 ACGAGGCACAACAGAGTAAG 57.559 50.000 0.00 0.00 0.00 2.34
218 219 2.869801 CAAACGAGGCACAACAGAGTAA 59.130 45.455 0.00 0.00 0.00 2.24
219 220 2.159014 ACAAACGAGGCACAACAGAGTA 60.159 45.455 0.00 0.00 0.00 2.59
220 221 1.299541 CAAACGAGGCACAACAGAGT 58.700 50.000 0.00 0.00 0.00 3.24
221 222 1.299541 ACAAACGAGGCACAACAGAG 58.700 50.000 0.00 0.00 0.00 3.35
222 223 2.605837 TACAAACGAGGCACAACAGA 57.394 45.000 0.00 0.00 0.00 3.41
223 224 3.896648 ATTACAAACGAGGCACAACAG 57.103 42.857 0.00 0.00 0.00 3.16
224 225 5.752892 TTTATTACAAACGAGGCACAACA 57.247 34.783 0.00 0.00 0.00 3.33
225 226 7.007995 GCTAATTTATTACAAACGAGGCACAAC 59.992 37.037 0.00 0.00 0.00 3.32
226 227 7.024768 GCTAATTTATTACAAACGAGGCACAA 58.975 34.615 0.00 0.00 0.00 3.33
227 228 6.373216 AGCTAATTTATTACAAACGAGGCACA 59.627 34.615 0.00 0.00 0.00 4.57
228 229 6.782150 AGCTAATTTATTACAAACGAGGCAC 58.218 36.000 0.00 0.00 0.00 5.01
229 230 6.596106 TGAGCTAATTTATTACAAACGAGGCA 59.404 34.615 0.00 0.00 0.00 4.75
230 231 7.011828 TGAGCTAATTTATTACAAACGAGGC 57.988 36.000 0.00 0.00 0.00 4.70
231 232 8.665685 AGTTGAGCTAATTTATTACAAACGAGG 58.334 33.333 0.00 0.00 0.00 4.63
233 234 9.820229 CAAGTTGAGCTAATTTATTACAAACGA 57.180 29.630 0.00 0.00 0.00 3.85
234 235 8.575454 GCAAGTTGAGCTAATTTATTACAAACG 58.425 33.333 7.16 0.00 0.00 3.60
235 236 9.626045 AGCAAGTTGAGCTAATTTATTACAAAC 57.374 29.630 7.16 0.00 41.32 2.93
236 237 9.624697 CAGCAAGTTGAGCTAATTTATTACAAA 57.375 29.630 7.16 0.00 41.14 2.83
237 238 7.754924 GCAGCAAGTTGAGCTAATTTATTACAA 59.245 33.333 7.16 0.00 41.14 2.41
238 239 7.250569 GCAGCAAGTTGAGCTAATTTATTACA 58.749 34.615 7.16 0.00 41.14 2.41
239 240 6.412072 CGCAGCAAGTTGAGCTAATTTATTAC 59.588 38.462 7.16 0.00 41.14 1.89
240 241 6.315144 TCGCAGCAAGTTGAGCTAATTTATTA 59.685 34.615 7.16 0.00 41.14 0.98
241 242 5.123820 TCGCAGCAAGTTGAGCTAATTTATT 59.876 36.000 7.16 0.00 41.14 1.40
242 243 4.635765 TCGCAGCAAGTTGAGCTAATTTAT 59.364 37.500 7.16 0.00 41.14 1.40
243 244 4.000325 TCGCAGCAAGTTGAGCTAATTTA 59.000 39.130 7.16 0.00 41.14 1.40
244 245 2.813754 TCGCAGCAAGTTGAGCTAATTT 59.186 40.909 7.16 0.00 41.14 1.82
245 246 2.426522 TCGCAGCAAGTTGAGCTAATT 58.573 42.857 7.16 0.00 41.14 1.40
246 247 2.099141 TCGCAGCAAGTTGAGCTAAT 57.901 45.000 7.16 0.00 41.14 1.73
247 248 1.733912 CATCGCAGCAAGTTGAGCTAA 59.266 47.619 7.16 1.62 41.14 3.09
248 249 1.362768 CATCGCAGCAAGTTGAGCTA 58.637 50.000 7.16 2.26 41.14 3.32
249 250 1.303799 CCATCGCAGCAAGTTGAGCT 61.304 55.000 7.16 0.00 44.62 4.09
250 251 1.136147 CCATCGCAGCAAGTTGAGC 59.864 57.895 7.16 8.80 0.00 4.26
251 252 0.674581 TCCCATCGCAGCAAGTTGAG 60.675 55.000 7.16 0.00 0.00 3.02
252 253 0.250684 TTCCCATCGCAGCAAGTTGA 60.251 50.000 7.16 0.00 0.00 3.18
253 254 0.169672 CTTCCCATCGCAGCAAGTTG 59.830 55.000 0.00 0.00 0.00 3.16
254 255 0.250901 ACTTCCCATCGCAGCAAGTT 60.251 50.000 0.00 0.00 0.00 2.66
255 256 0.674895 GACTTCCCATCGCAGCAAGT 60.675 55.000 0.00 0.00 0.00 3.16
256 257 1.699656 CGACTTCCCATCGCAGCAAG 61.700 60.000 0.00 0.00 31.96 4.01
257 258 1.741401 CGACTTCCCATCGCAGCAA 60.741 57.895 0.00 0.00 31.96 3.91
258 259 2.125552 CGACTTCCCATCGCAGCA 60.126 61.111 0.00 0.00 31.96 4.41
259 260 2.125512 ACGACTTCCCATCGCAGC 60.126 61.111 0.00 0.00 43.46 5.25
260 261 0.389817 TTCACGACTTCCCATCGCAG 60.390 55.000 0.00 0.00 43.46 5.18
261 262 0.669318 GTTCACGACTTCCCATCGCA 60.669 55.000 0.00 0.00 43.46 5.10
262 263 0.389948 AGTTCACGACTTCCCATCGC 60.390 55.000 0.00 0.00 43.46 4.58
263 264 2.163815 ACTAGTTCACGACTTCCCATCG 59.836 50.000 0.00 0.00 45.17 3.84
264 265 3.192844 TCACTAGTTCACGACTTCCCATC 59.807 47.826 0.00 0.00 39.86 3.51
265 266 3.162666 TCACTAGTTCACGACTTCCCAT 58.837 45.455 0.00 0.00 39.86 4.00
266 267 2.589720 TCACTAGTTCACGACTTCCCA 58.410 47.619 0.00 0.00 39.86 4.37
267 268 3.315418 GTTCACTAGTTCACGACTTCCC 58.685 50.000 0.00 0.00 39.86 3.97
268 269 3.315418 GGTTCACTAGTTCACGACTTCC 58.685 50.000 0.00 0.00 39.86 3.46
269 270 2.978489 CGGTTCACTAGTTCACGACTTC 59.022 50.000 0.00 0.00 39.86 3.01
270 271 2.360165 ACGGTTCACTAGTTCACGACTT 59.640 45.455 11.50 0.00 39.86 3.01
271 272 1.952296 ACGGTTCACTAGTTCACGACT 59.048 47.619 11.50 0.00 42.55 4.18
272 273 2.412421 ACGGTTCACTAGTTCACGAC 57.588 50.000 11.50 0.00 0.00 4.34
273 274 2.485426 CCTACGGTTCACTAGTTCACGA 59.515 50.000 11.50 0.00 0.00 4.35
274 275 2.415090 CCCTACGGTTCACTAGTTCACG 60.415 54.545 0.00 0.00 0.00 4.35
275 276 2.560105 ACCCTACGGTTCACTAGTTCAC 59.440 50.000 0.00 0.00 40.58 3.18
276 277 2.559668 CACCCTACGGTTCACTAGTTCA 59.440 50.000 0.00 0.00 42.04 3.18
277 278 2.560105 ACACCCTACGGTTCACTAGTTC 59.440 50.000 0.00 0.00 42.04 3.01
278 279 2.298163 CACACCCTACGGTTCACTAGTT 59.702 50.000 0.00 0.00 42.04 2.24
279 280 1.891150 CACACCCTACGGTTCACTAGT 59.109 52.381 0.00 0.00 42.04 2.57
280 281 1.203994 CCACACCCTACGGTTCACTAG 59.796 57.143 0.00 0.00 42.04 2.57
281 282 1.259609 CCACACCCTACGGTTCACTA 58.740 55.000 0.00 0.00 42.04 2.74
282 283 0.761702 ACCACACCCTACGGTTCACT 60.762 55.000 0.00 0.00 42.04 3.41
283 284 0.107268 AACCACACCCTACGGTTCAC 59.893 55.000 0.00 0.00 42.04 3.18
284 285 0.107081 CAACCACACCCTACGGTTCA 59.893 55.000 0.00 0.00 42.04 3.18
285 286 0.604511 CCAACCACACCCTACGGTTC 60.605 60.000 0.00 0.00 42.04 3.62
286 287 1.452801 CCAACCACACCCTACGGTT 59.547 57.895 0.00 0.00 42.04 4.44
287 288 2.522367 CCCAACCACACCCTACGGT 61.522 63.158 0.00 0.00 46.31 4.83
288 289 1.770749 TTCCCAACCACACCCTACGG 61.771 60.000 0.00 0.00 0.00 4.02
289 290 0.604511 GTTCCCAACCACACCCTACG 60.605 60.000 0.00 0.00 0.00 3.51
290 291 3.334413 GTTCCCAACCACACCCTAC 57.666 57.895 0.00 0.00 0.00 3.18
300 301 3.881937 ACATAGTCTACGGTTCCCAAC 57.118 47.619 0.00 0.00 0.00 3.77
301 302 5.999205 TTTACATAGTCTACGGTTCCCAA 57.001 39.130 0.00 0.00 0.00 4.12
302 303 7.288389 ACATATTTACATAGTCTACGGTTCCCA 59.712 37.037 0.00 0.00 0.00 4.37
303 304 7.664758 ACATATTTACATAGTCTACGGTTCCC 58.335 38.462 0.00 0.00 0.00 3.97
304 305 8.975439 CAACATATTTACATAGTCTACGGTTCC 58.025 37.037 0.00 0.00 0.00 3.62
305 306 8.975439 CCAACATATTTACATAGTCTACGGTTC 58.025 37.037 0.00 0.00 0.00 3.62
306 307 8.480501 ACCAACATATTTACATAGTCTACGGTT 58.519 33.333 0.00 0.00 0.00 4.44
307 308 7.924412 CACCAACATATTTACATAGTCTACGGT 59.076 37.037 0.00 0.00 0.00 4.83
308 309 7.924412 ACACCAACATATTTACATAGTCTACGG 59.076 37.037 0.00 0.00 0.00 4.02
309 310 8.752254 CACACCAACATATTTACATAGTCTACG 58.248 37.037 0.00 0.00 0.00 3.51
310 311 9.042008 CCACACCAACATATTTACATAGTCTAC 57.958 37.037 0.00 0.00 0.00 2.59
311 312 8.208224 CCCACACCAACATATTTACATAGTCTA 58.792 37.037 0.00 0.00 0.00 2.59
312 313 7.054124 CCCACACCAACATATTTACATAGTCT 58.946 38.462 0.00 0.00 0.00 3.24
313 314 6.826741 ACCCACACCAACATATTTACATAGTC 59.173 38.462 0.00 0.00 0.00 2.59
314 315 6.601613 CACCCACACCAACATATTTACATAGT 59.398 38.462 0.00 0.00 0.00 2.12
315 316 6.601613 ACACCCACACCAACATATTTACATAG 59.398 38.462 0.00 0.00 0.00 2.23
316 317 6.486056 ACACCCACACCAACATATTTACATA 58.514 36.000 0.00 0.00 0.00 2.29
317 318 5.329399 ACACCCACACCAACATATTTACAT 58.671 37.500 0.00 0.00 0.00 2.29
318 319 4.730966 ACACCCACACCAACATATTTACA 58.269 39.130 0.00 0.00 0.00 2.41
319 320 5.124297 GGTACACCCACACCAACATATTTAC 59.876 44.000 0.00 0.00 34.77 2.01
320 321 5.014333 AGGTACACCCACACCAACATATTTA 59.986 40.000 0.00 0.00 37.28 1.40
321 322 4.083565 GGTACACCCACACCAACATATTT 58.916 43.478 0.00 0.00 34.77 1.40
322 323 3.332485 AGGTACACCCACACCAACATATT 59.668 43.478 0.00 0.00 37.28 1.28
323 324 2.916934 AGGTACACCCACACCAACATAT 59.083 45.455 0.00 0.00 37.28 1.78
324 325 2.340731 AGGTACACCCACACCAACATA 58.659 47.619 0.00 0.00 37.28 2.29
325 326 1.145571 AGGTACACCCACACCAACAT 58.854 50.000 0.00 0.00 37.28 2.71
326 327 1.417145 GTAGGTACACCCACACCAACA 59.583 52.381 0.00 0.00 37.28 3.33
327 328 1.417145 TGTAGGTACACCCACACCAAC 59.583 52.381 0.00 0.00 37.28 3.77
328 329 1.803866 TGTAGGTACACCCACACCAA 58.196 50.000 0.00 0.00 37.28 3.67
329 330 1.803866 TTGTAGGTACACCCACACCA 58.196 50.000 0.00 0.00 37.28 4.17
330 331 2.303600 TCATTGTAGGTACACCCACACC 59.696 50.000 0.00 0.00 35.64 4.16
331 332 3.688694 TCATTGTAGGTACACCCACAC 57.311 47.619 0.00 0.00 35.64 3.82
332 333 3.585289 ACATCATTGTAGGTACACCCACA 59.415 43.478 0.00 0.00 35.64 4.17
333 334 4.216411 ACATCATTGTAGGTACACCCAC 57.784 45.455 0.00 0.00 35.64 4.61
334 335 4.621983 CGAACATCATTGTAGGTACACCCA 60.622 45.833 0.00 0.00 35.64 4.51
335 336 3.869246 CGAACATCATTGTAGGTACACCC 59.131 47.826 0.00 0.00 35.64 4.61
336 337 3.308866 GCGAACATCATTGTAGGTACACC 59.691 47.826 0.00 0.00 35.64 4.16
337 338 3.930229 TGCGAACATCATTGTAGGTACAC 59.070 43.478 0.00 0.00 35.64 2.90
338 339 4.195225 TGCGAACATCATTGTAGGTACA 57.805 40.909 0.00 0.00 34.06 2.90
351 352 0.459585 AGCCGTAACGATGCGAACAT 60.460 50.000 4.46 0.00 39.98 2.71
352 353 0.668096 AAGCCGTAACGATGCGAACA 60.668 50.000 4.46 0.00 36.72 3.18
353 354 0.441145 AAAGCCGTAACGATGCGAAC 59.559 50.000 4.46 0.00 36.72 3.95
354 355 0.440758 CAAAGCCGTAACGATGCGAA 59.559 50.000 4.46 0.00 36.72 4.70
355 356 1.355796 CCAAAGCCGTAACGATGCGA 61.356 55.000 4.46 0.00 36.72 5.10
356 357 1.060308 CCAAAGCCGTAACGATGCG 59.940 57.895 0.00 0.00 0.00 4.73
357 358 1.226295 GCCAAAGCCGTAACGATGC 60.226 57.895 0.00 0.00 0.00 3.91
358 359 1.060308 CGCCAAAGCCGTAACGATG 59.940 57.895 0.00 0.00 34.57 3.84
359 360 0.108709 TACGCCAAAGCCGTAACGAT 60.109 50.000 0.00 0.00 34.57 3.73
360 361 1.008361 GTACGCCAAAGCCGTAACGA 61.008 55.000 0.00 0.00 32.50 3.85
361 362 1.010419 AGTACGCCAAAGCCGTAACG 61.010 55.000 0.00 0.00 32.50 3.18
362 363 0.717784 GAGTACGCCAAAGCCGTAAC 59.282 55.000 0.00 0.00 32.50 2.50
363 364 0.604578 AGAGTACGCCAAAGCCGTAA 59.395 50.000 0.00 0.00 32.50 3.18
364 365 0.604578 AAGAGTACGCCAAAGCCGTA 59.395 50.000 0.00 0.00 34.57 4.02
365 366 0.949105 CAAGAGTACGCCAAAGCCGT 60.949 55.000 0.00 0.00 34.57 5.68
366 367 0.949105 ACAAGAGTACGCCAAAGCCG 60.949 55.000 0.00 0.00 34.57 5.52
367 368 2.088950 TACAAGAGTACGCCAAAGCC 57.911 50.000 0.00 0.00 34.57 4.35
368 369 4.477302 TTTTACAAGAGTACGCCAAAGC 57.523 40.909 0.00 0.00 0.00 3.51
389 390 4.323417 TCACGATGCTACACAGGATTTTT 58.677 39.130 0.00 0.00 32.14 1.94
390 391 3.935203 CTCACGATGCTACACAGGATTTT 59.065 43.478 0.00 0.00 32.14 1.82
391 392 3.195610 TCTCACGATGCTACACAGGATTT 59.804 43.478 0.00 0.00 32.14 2.17
392 393 2.760650 TCTCACGATGCTACACAGGATT 59.239 45.455 0.00 0.00 32.14 3.01
393 394 2.379005 TCTCACGATGCTACACAGGAT 58.621 47.619 0.00 0.00 35.18 3.24
394 395 1.834188 TCTCACGATGCTACACAGGA 58.166 50.000 0.00 0.00 0.00 3.86
395 396 2.654749 TTCTCACGATGCTACACAGG 57.345 50.000 0.00 0.00 0.00 4.00
396 397 5.004821 GTGTTATTCTCACGATGCTACACAG 59.995 44.000 0.00 0.00 34.91 3.66
397 398 4.862574 GTGTTATTCTCACGATGCTACACA 59.137 41.667 0.00 0.00 34.91 3.72
398 399 4.862574 TGTGTTATTCTCACGATGCTACAC 59.137 41.667 0.00 0.00 38.48 2.90
399 400 5.066968 TGTGTTATTCTCACGATGCTACA 57.933 39.130 0.00 0.00 38.48 2.74
400 401 6.589830 ATTGTGTTATTCTCACGATGCTAC 57.410 37.500 0.00 0.00 38.16 3.58
401 402 6.416750 CGTATTGTGTTATTCTCACGATGCTA 59.583 38.462 8.49 0.00 39.39 3.49
402 403 5.232202 CGTATTGTGTTATTCTCACGATGCT 59.768 40.000 8.49 0.00 39.39 3.79
403 404 5.231357 TCGTATTGTGTTATTCTCACGATGC 59.769 40.000 8.49 6.66 39.39 3.91
404 405 6.806120 TCGTATTGTGTTATTCTCACGATG 57.194 37.500 8.49 0.00 39.39 3.84
405 406 6.475727 CCTTCGTATTGTGTTATTCTCACGAT 59.524 38.462 0.00 0.00 41.20 3.73
406 407 5.803461 CCTTCGTATTGTGTTATTCTCACGA 59.197 40.000 0.00 0.00 38.48 4.35
407 408 5.005394 CCCTTCGTATTGTGTTATTCTCACG 59.995 44.000 0.00 0.00 38.48 4.35
408 409 6.103997 TCCCTTCGTATTGTGTTATTCTCAC 58.896 40.000 0.00 0.00 36.48 3.51
409 410 6.070995 ACTCCCTTCGTATTGTGTTATTCTCA 60.071 38.462 0.00 0.00 0.00 3.27
410 411 6.338937 ACTCCCTTCGTATTGTGTTATTCTC 58.661 40.000 0.00 0.00 0.00 2.87
411 412 6.070995 TGACTCCCTTCGTATTGTGTTATTCT 60.071 38.462 0.00 0.00 0.00 2.40
412 413 6.103997 TGACTCCCTTCGTATTGTGTTATTC 58.896 40.000 0.00 0.00 0.00 1.75
413 414 6.045072 TGACTCCCTTCGTATTGTGTTATT 57.955 37.500 0.00 0.00 0.00 1.40
414 415 5.670792 TGACTCCCTTCGTATTGTGTTAT 57.329 39.130 0.00 0.00 0.00 1.89
415 416 5.471556 TTGACTCCCTTCGTATTGTGTTA 57.528 39.130 0.00 0.00 0.00 2.41
416 417 4.345859 TTGACTCCCTTCGTATTGTGTT 57.654 40.909 0.00 0.00 0.00 3.32
417 418 4.315803 CTTTGACTCCCTTCGTATTGTGT 58.684 43.478 0.00 0.00 0.00 3.72
418 419 3.684788 CCTTTGACTCCCTTCGTATTGTG 59.315 47.826 0.00 0.00 0.00 3.33
419 420 3.581332 TCCTTTGACTCCCTTCGTATTGT 59.419 43.478 0.00 0.00 0.00 2.71
420 421 4.184629 CTCCTTTGACTCCCTTCGTATTG 58.815 47.826 0.00 0.00 0.00 1.90
421 422 3.838903 ACTCCTTTGACTCCCTTCGTATT 59.161 43.478 0.00 0.00 0.00 1.89
422 423 3.442076 ACTCCTTTGACTCCCTTCGTAT 58.558 45.455 0.00 0.00 0.00 3.06
423 424 2.824341 GACTCCTTTGACTCCCTTCGTA 59.176 50.000 0.00 0.00 0.00 3.43
424 425 1.619332 GACTCCTTTGACTCCCTTCGT 59.381 52.381 0.00 0.00 0.00 3.85
425 426 1.618837 TGACTCCTTTGACTCCCTTCG 59.381 52.381 0.00 0.00 0.00 3.79
426 427 2.635427 AGTGACTCCTTTGACTCCCTTC 59.365 50.000 0.00 0.00 0.00 3.46
427 428 2.695585 AGTGACTCCTTTGACTCCCTT 58.304 47.619 0.00 0.00 0.00 3.95
428 429 2.407340 AGTGACTCCTTTGACTCCCT 57.593 50.000 0.00 0.00 0.00 4.20
429 430 4.618920 TTTAGTGACTCCTTTGACTCCC 57.381 45.455 0.00 0.00 0.00 4.30
430 431 4.755629 GGTTTTAGTGACTCCTTTGACTCC 59.244 45.833 0.00 0.00 0.00 3.85
431 432 5.612351 AGGTTTTAGTGACTCCTTTGACTC 58.388 41.667 0.00 0.00 0.00 3.36
432 433 5.632034 AGGTTTTAGTGACTCCTTTGACT 57.368 39.130 0.00 0.00 0.00 3.41
433 434 6.056236 AGAAGGTTTTAGTGACTCCTTTGAC 58.944 40.000 4.98 0.00 38.42 3.18
434 435 6.248569 AGAAGGTTTTAGTGACTCCTTTGA 57.751 37.500 4.98 0.00 38.42 2.69
435 436 6.017026 GGAAGAAGGTTTTAGTGACTCCTTTG 60.017 42.308 4.98 0.00 38.42 2.77
436 437 6.062749 GGAAGAAGGTTTTAGTGACTCCTTT 58.937 40.000 4.98 0.00 38.42 3.11
437 438 5.456330 GGGAAGAAGGTTTTAGTGACTCCTT 60.456 44.000 3.25 3.25 40.59 3.36
438 439 4.041815 GGGAAGAAGGTTTTAGTGACTCCT 59.958 45.833 0.00 0.00 0.00 3.69
439 440 4.202430 TGGGAAGAAGGTTTTAGTGACTCC 60.202 45.833 0.00 0.00 0.00 3.85
440 441 4.755629 GTGGGAAGAAGGTTTTAGTGACTC 59.244 45.833 0.00 0.00 0.00 3.36
441 442 4.445879 GGTGGGAAGAAGGTTTTAGTGACT 60.446 45.833 0.00 0.00 0.00 3.41
442 443 3.819337 GGTGGGAAGAAGGTTTTAGTGAC 59.181 47.826 0.00 0.00 0.00 3.67
443 444 3.460340 TGGTGGGAAGAAGGTTTTAGTGA 59.540 43.478 0.00 0.00 0.00 3.41
444 445 3.827722 TGGTGGGAAGAAGGTTTTAGTG 58.172 45.455 0.00 0.00 0.00 2.74
445 446 4.079385 AGTTGGTGGGAAGAAGGTTTTAGT 60.079 41.667 0.00 0.00 0.00 2.24
446 447 4.470602 AGTTGGTGGGAAGAAGGTTTTAG 58.529 43.478 0.00 0.00 0.00 1.85
447 448 4.466827 GAGTTGGTGGGAAGAAGGTTTTA 58.533 43.478 0.00 0.00 0.00 1.52
448 449 3.296854 GAGTTGGTGGGAAGAAGGTTTT 58.703 45.455 0.00 0.00 0.00 2.43
449 450 2.424379 GGAGTTGGTGGGAAGAAGGTTT 60.424 50.000 0.00 0.00 0.00 3.27
450 451 1.145119 GGAGTTGGTGGGAAGAAGGTT 59.855 52.381 0.00 0.00 0.00 3.50
451 452 0.771755 GGAGTTGGTGGGAAGAAGGT 59.228 55.000 0.00 0.00 0.00 3.50
452 453 1.003696 GAGGAGTTGGTGGGAAGAAGG 59.996 57.143 0.00 0.00 0.00 3.46
453 454 1.003696 GGAGGAGTTGGTGGGAAGAAG 59.996 57.143 0.00 0.00 0.00 2.85
458 459 2.606519 CGGGAGGAGTTGGTGGGA 60.607 66.667 0.00 0.00 0.00 4.37
493 494 2.036992 GTGATTTGGGTGACATTTGGCA 59.963 45.455 0.00 0.00 0.00 4.92
532 533 1.112459 GCGTGTGAGCGTTTCTTTTG 58.888 50.000 0.00 0.00 0.00 2.44
533 534 0.730265 TGCGTGTGAGCGTTTCTTTT 59.270 45.000 0.00 0.00 40.67 2.27
536 537 2.244651 GGTGCGTGTGAGCGTTTCT 61.245 57.895 0.00 0.00 40.67 2.52
567 568 2.546795 GCTCCCTTGTAGATCGGATGTG 60.547 54.545 0.00 0.00 0.00 3.21
571 572 1.107538 CCGCTCCCTTGTAGATCGGA 61.108 60.000 0.00 0.00 43.89 4.55
572 573 1.364171 CCGCTCCCTTGTAGATCGG 59.636 63.158 0.00 0.00 36.77 4.18
573 574 1.300233 GCCGCTCCCTTGTAGATCG 60.300 63.158 0.00 0.00 0.00 3.69
574 575 1.069935 GGCCGCTCCCTTGTAGATC 59.930 63.158 0.00 0.00 0.00 2.75
575 576 2.797278 CGGCCGCTCCCTTGTAGAT 61.797 63.158 14.67 0.00 0.00 1.98
576 577 2.842188 TACGGCCGCTCCCTTGTAGA 62.842 60.000 28.58 0.00 0.00 2.59
577 578 1.952102 TTACGGCCGCTCCCTTGTAG 61.952 60.000 28.58 0.00 0.00 2.74
578 579 1.983481 TTACGGCCGCTCCCTTGTA 60.983 57.895 28.58 4.04 0.00 2.41
579 580 3.315949 TTACGGCCGCTCCCTTGT 61.316 61.111 28.58 5.26 0.00 3.16
580 581 2.818274 GTTACGGCCGCTCCCTTG 60.818 66.667 28.58 0.00 0.00 3.61
581 582 4.446413 CGTTACGGCCGCTCCCTT 62.446 66.667 28.58 7.06 0.00 3.95
583 584 4.217159 ATCGTTACGGCCGCTCCC 62.217 66.667 28.58 10.01 0.00 4.30
584 585 2.657620 GATCGTTACGGCCGCTCC 60.658 66.667 28.58 12.07 0.00 4.70
585 586 3.022914 CGATCGTTACGGCCGCTC 61.023 66.667 28.58 14.91 0.00 5.03
586 587 4.564116 CCGATCGTTACGGCCGCT 62.564 66.667 28.58 15.49 43.74 5.52
592 593 1.060122 GAAACAAGGCCGATCGTTACG 59.940 52.381 15.09 0.00 0.00 3.18
593 594 1.395954 GGAAACAAGGCCGATCGTTAC 59.604 52.381 15.09 3.57 0.00 2.50
594 595 1.002201 TGGAAACAAGGCCGATCGTTA 59.998 47.619 15.09 0.00 37.44 3.18
595 596 0.250553 TGGAAACAAGGCCGATCGTT 60.251 50.000 15.09 0.00 37.44 3.85
596 597 1.373435 TGGAAACAAGGCCGATCGT 59.627 52.632 15.09 0.00 37.44 3.73
597 598 4.294523 TGGAAACAAGGCCGATCG 57.705 55.556 8.51 8.51 37.44 3.69
672 675 6.208007 TCGATTCCTGCCTCGTAATAGAATAA 59.792 38.462 0.00 0.00 36.33 1.40
680 683 1.470979 GCTTCGATTCCTGCCTCGTAA 60.471 52.381 0.00 0.00 36.33 3.18
719 722 4.156739 GGGGAATATGAAATTGCGAGATCC 59.843 45.833 0.00 0.00 0.00 3.36
774 777 0.384309 TTCCGTCTTCATCGATCGGG 59.616 55.000 16.41 8.33 41.27 5.14
823 826 2.126228 GTTGGGATCGACGACGCA 60.126 61.111 0.00 6.40 39.58 5.24
824 827 2.884207 GGTTGGGATCGACGACGC 60.884 66.667 0.00 3.70 39.58 5.19
825 828 0.668096 TTTGGTTGGGATCGACGACG 60.668 55.000 0.00 0.00 41.26 5.12
826 829 1.196127 GTTTTGGTTGGGATCGACGAC 59.804 52.381 0.00 0.00 0.00 4.34
827 830 1.515081 GTTTTGGTTGGGATCGACGA 58.485 50.000 0.00 0.00 0.00 4.20
872 880 6.127563 TGCTCCGAGATGTATAGTGTTTACAA 60.128 38.462 0.00 0.00 33.55 2.41
911 920 2.652530 CGCAATGGCTGGCTTTGT 59.347 55.556 24.04 0.00 38.10 2.83
1300 1309 4.129737 CTCGACGACGGGCATGGT 62.130 66.667 7.55 0.00 40.21 3.55
1421 1430 4.247380 CCAGCAGGATCCTCGGGC 62.247 72.222 12.69 13.14 36.89 6.13
1491 1500 2.526304 TGTTCTTGGTCGACTTGAGG 57.474 50.000 16.46 0.68 0.00 3.86
1707 1716 2.283824 GAGGTTGCTCCCCTCGTAA 58.716 57.895 1.92 0.00 39.22 3.18
1803 1812 0.606401 CCATCGACCACTGGCAGTTT 60.606 55.000 19.43 7.94 0.00 2.66
1971 1980 0.544357 ACACCTTCTCCATCCACCGA 60.544 55.000 0.00 0.00 0.00 4.69
2142 2151 1.682684 CTGCTCCACCGGGTAGTCT 60.683 63.158 6.32 0.00 34.93 3.24
2235 2244 1.966451 CTTGGGGTTGGTCAGCGAC 60.966 63.158 0.00 0.79 0.00 5.19
2290 2299 0.318762 AGAGACGCCTCCTTGTTCAC 59.681 55.000 0.00 0.00 40.30 3.18
2353 2365 4.704057 CCTCTGAAAAATCTTTCTCAGGGG 59.296 45.833 9.86 9.86 41.41 4.79
2486 2500 0.593128 CGTCCTGGAGCCAAAACAAG 59.407 55.000 0.00 0.00 0.00 3.16
2589 2606 3.991773 TGCACCACAAATACTCGTCTAAC 59.008 43.478 0.00 0.00 0.00 2.34
2615 2632 1.308783 TTCCACACAAGCACAACGCA 61.309 50.000 0.00 0.00 46.13 5.24
2668 2685 7.429340 GTGACGCATGATCTAAAACCTATTTTG 59.571 37.037 0.00 0.00 38.50 2.44
2675 2692 2.030457 CCGTGACGCATGATCTAAAACC 59.970 50.000 0.00 0.00 0.00 3.27
2687 2704 4.539083 ACCAAGCACCGTGACGCA 62.539 61.111 1.65 0.00 0.00 5.24
2694 2711 2.285827 TTGTTTTGAACCAAGCACCG 57.714 45.000 0.00 0.00 0.00 4.94
2706 2723 3.506810 TGAGGCTTCGTTGTTTGTTTTG 58.493 40.909 0.00 0.00 0.00 2.44
2722 2739 2.372264 TCTCATTTCAGGCATTGAGGC 58.628 47.619 0.00 0.00 44.61 4.70
2781 2798 4.279145 GACTGAGATCTAACCACACCCTA 58.721 47.826 0.00 0.00 0.00 3.53
2783 2800 2.159226 CGACTGAGATCTAACCACACCC 60.159 54.545 0.00 0.00 0.00 4.61
2791 2808 3.196463 GACCGAGACGACTGAGATCTAA 58.804 50.000 0.00 0.00 0.00 2.10
2800 2817 1.306642 ATCGCTTGACCGAGACGACT 61.307 55.000 0.00 0.00 40.97 4.18
2801 2818 0.376152 TATCGCTTGACCGAGACGAC 59.624 55.000 0.00 0.00 40.97 4.34
2803 2820 0.656259 TCTATCGCTTGACCGAGACG 59.344 55.000 0.00 0.00 40.97 4.18
2805 2822 2.089201 TGTTCTATCGCTTGACCGAGA 58.911 47.619 0.00 0.00 40.97 4.04
2807 2824 4.848562 ATATGTTCTATCGCTTGACCGA 57.151 40.909 0.00 0.00 41.98 4.69
2808 2825 7.402811 TTTTATATGTTCTATCGCTTGACCG 57.597 36.000 0.00 0.00 0.00 4.79
2856 2873 4.558178 TCTTACGTGCAGATCCGTAAAAA 58.442 39.130 17.33 8.80 45.56 1.94
2859 2876 3.630769 AGATCTTACGTGCAGATCCGTAA 59.369 43.478 25.09 16.22 45.52 3.18
2864 2881 4.845387 TCGTTAGATCTTACGTGCAGATC 58.155 43.478 27.64 22.90 44.97 2.75
2869 2886 5.108330 GCTGTATTCGTTAGATCTTACGTGC 60.108 44.000 27.64 16.65 38.79 5.34
2885 2902 8.830201 ATGAAGTCTCAATAGATGCTGTATTC 57.170 34.615 0.00 0.00 34.49 1.75
2890 2907 8.659925 ACTTAATGAAGTCTCAATAGATGCTG 57.340 34.615 0.00 0.00 42.50 4.41
2905 2922 9.868277 ATCTTAGTCAACTGAGACTTAATGAAG 57.132 33.333 6.77 9.19 46.26 3.02
3069 3093 1.194781 GGGAGGGTGCAGAGTTGAGA 61.195 60.000 0.00 0.00 0.00 3.27
3071 3095 1.461268 TGGGAGGGTGCAGAGTTGA 60.461 57.895 0.00 0.00 0.00 3.18
3077 3101 3.721706 GAGGGTGGGAGGGTGCAG 61.722 72.222 0.00 0.00 0.00 4.41
3081 3105 3.552911 AAGGGAGGGTGGGAGGGT 61.553 66.667 0.00 0.00 0.00 4.34
3087 3111 4.410400 GTGGCGAAGGGAGGGTGG 62.410 72.222 0.00 0.00 0.00 4.61
3089 3113 3.322466 CAGTGGCGAAGGGAGGGT 61.322 66.667 0.00 0.00 0.00 4.34
3146 3170 0.036732 TGCACATGTGAAGGAGGGAC 59.963 55.000 29.80 8.59 0.00 4.46
3164 3188 1.671054 CCACCCCGTGCTAGTTGTG 60.671 63.158 0.00 0.00 31.34 3.33
3166 3190 2.746277 GCCACCCCGTGCTAGTTG 60.746 66.667 0.00 0.00 31.34 3.16
3174 3198 1.198759 AACTAGATGTGCCACCCCGT 61.199 55.000 0.00 0.00 0.00 5.28
3176 3200 2.103263 CTCTAACTAGATGTGCCACCCC 59.897 54.545 0.00 0.00 0.00 4.95
3177 3201 2.103263 CCTCTAACTAGATGTGCCACCC 59.897 54.545 0.00 0.00 0.00 4.61
3293 3317 0.325296 CAGGTAGGACTAGGCCACCA 60.325 60.000 27.97 8.87 33.93 4.17
3302 3326 0.851469 TAGATCGGCCAGGTAGGACT 59.149 55.000 2.24 0.00 46.64 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.