Multiple sequence alignment - TraesCS5B01G127900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G127900 chr5B 100.000 4136 0 0 1 4136 233445411 233449546 0.000000e+00 7638
1 TraesCS5B01G127900 chr5B 94.030 67 3 1 2741 2806 625959496 625959562 2.630000e-17 100
2 TraesCS5B01G127900 chr4A 98.855 1048 11 1 3090 4136 617923972 617922925 0.000000e+00 1868
3 TraesCS5B01G127900 chr4A 98.664 1048 12 2 3090 4136 564650311 564651357 0.000000e+00 1857
4 TraesCS5B01G127900 chr4A 79.283 251 43 9 33 278 490580815 490580569 2.560000e-37 167
5 TraesCS5B01G127900 chr3B 98.664 1048 13 1 3090 4136 602780142 602779095 0.000000e+00 1857
6 TraesCS5B01G127900 chr3B 82.447 188 32 1 33 220 489510804 489510990 3.310000e-36 163
7 TraesCS5B01G127900 chr7A 98.570 1049 14 1 3089 4136 688841508 688842556 0.000000e+00 1853
8 TraesCS5B01G127900 chr7A 98.378 1048 15 2 3090 4136 27642598 27641552 0.000000e+00 1840
9 TraesCS5B01G127900 chr7A 98.279 1046 13 2 3092 4136 435960848 435961889 0.000000e+00 1827
10 TraesCS5B01G127900 chr3A 98.378 1048 16 1 3090 4136 710255574 710254527 0.000000e+00 1840
11 TraesCS5B01G127900 chr5A 98.093 1049 17 3 3090 4136 665426893 665427940 0.000000e+00 1823
12 TraesCS5B01G127900 chr5A 92.944 1148 66 4 316 1448 290112614 290113761 0.000000e+00 1657
13 TraesCS5B01G127900 chr5A 90.933 761 42 6 1663 2422 290113823 290114557 0.000000e+00 998
14 TraesCS5B01G127900 chr5A 96.743 307 10 0 2441 2747 290114548 290114854 2.850000e-141 512
15 TraesCS5B01G127900 chr5A 91.635 263 20 2 2829 3090 290114876 290115137 3.040000e-96 363
16 TraesCS5B01G127900 chr4B 97.805 1048 22 1 3090 4136 24666289 24667336 0.000000e+00 1807
17 TraesCS5B01G127900 chr5D 94.046 1142 58 5 316 1448 217420751 217421891 0.000000e+00 1724
18 TraesCS5B01G127900 chr5D 93.979 764 36 6 1663 2422 217421953 217422710 0.000000e+00 1147
19 TraesCS5B01G127900 chr5D 95.833 312 12 1 2441 2752 217422701 217423011 1.720000e-138 503
20 TraesCS5B01G127900 chr5D 90.785 293 23 4 2801 3090 217423005 217423296 5.010000e-104 388
21 TraesCS5B01G127900 chr5D 96.721 61 2 0 2742 2802 415615077 415615017 7.310000e-18 102
22 TraesCS5B01G127900 chr4D 86.784 227 28 2 45 271 417812654 417812878 6.860000e-63 252
23 TraesCS5B01G127900 chr4D 95.455 66 3 0 2742 2807 175088843 175088908 5.650000e-19 106
24 TraesCS5B01G127900 chr7B 93.789 161 7 1 1450 1610 561750769 561750612 5.340000e-59 239
25 TraesCS5B01G127900 chr7B 77.333 225 39 12 48 268 749243353 749243569 5.610000e-24 122
26 TraesCS5B01G127900 chr7B 96.721 61 2 0 2742 2802 473406746 473406686 7.310000e-18 102
27 TraesCS5B01G127900 chrUn 92.405 158 9 1 1456 1613 31220646 31220492 5.380000e-54 222
28 TraesCS5B01G127900 chrUn 77.778 225 42 5 45 269 217827938 217827722 9.330000e-27 132
29 TraesCS5B01G127900 chrUn 77.778 225 42 5 45 269 227092206 227091990 9.330000e-27 132
30 TraesCS5B01G127900 chr7D 90.588 170 13 1 1444 1613 360553808 360553974 5.380000e-54 222
31 TraesCS5B01G127900 chr7D 89.941 169 14 3 1450 1618 453283658 453283493 9.010000e-52 215
32 TraesCS5B01G127900 chr2B 91.463 164 11 3 1450 1613 134256846 134256686 5.380000e-54 222
33 TraesCS5B01G127900 chr6D 91.411 163 11 1 1447 1609 311580536 311580695 1.940000e-53 220
34 TraesCS5B01G127900 chr6D 78.390 236 44 7 36 268 324747268 324747037 3.330000e-31 147
35 TraesCS5B01G127900 chr1D 91.875 160 10 1 1450 1609 427827077 427826921 1.940000e-53 220
36 TraesCS5B01G127900 chr6B 89.655 174 12 3 1450 1623 131720909 131720742 2.500000e-52 217
37 TraesCS5B01G127900 chr3D 90.058 171 11 3 1450 1618 486424944 486424778 2.500000e-52 217
38 TraesCS5B01G127900 chr3D 80.870 230 29 12 45 268 584353345 584353125 2.560000e-37 167
39 TraesCS5B01G127900 chr3D 96.774 62 2 0 2742 2803 426879614 426879675 2.030000e-18 104
40 TraesCS5B01G127900 chr1A 77.447 235 40 8 40 274 493319845 493320066 1.210000e-25 128
41 TraesCS5B01G127900 chr1A 96.721 61 2 0 2742 2802 251345847 251345787 7.310000e-18 102
42 TraesCS5B01G127900 chr2A 96.875 64 1 1 2741 2803 61487299 61487236 5.650000e-19 106
43 TraesCS5B01G127900 chr1B 95.455 66 3 0 2742 2807 624882041 624882106 5.650000e-19 106
44 TraesCS5B01G127900 chr2D 96.721 61 2 0 2742 2802 260370055 260369995 7.310000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G127900 chr5B 233445411 233449546 4135 False 7638.0 7638 100.00000 1 4136 1 chr5B.!!$F1 4135
1 TraesCS5B01G127900 chr4A 617922925 617923972 1047 True 1868.0 1868 98.85500 3090 4136 1 chr4A.!!$R2 1046
2 TraesCS5B01G127900 chr4A 564650311 564651357 1046 False 1857.0 1857 98.66400 3090 4136 1 chr4A.!!$F1 1046
3 TraesCS5B01G127900 chr3B 602779095 602780142 1047 True 1857.0 1857 98.66400 3090 4136 1 chr3B.!!$R1 1046
4 TraesCS5B01G127900 chr7A 688841508 688842556 1048 False 1853.0 1853 98.57000 3089 4136 1 chr7A.!!$F2 1047
5 TraesCS5B01G127900 chr7A 27641552 27642598 1046 True 1840.0 1840 98.37800 3090 4136 1 chr7A.!!$R1 1046
6 TraesCS5B01G127900 chr7A 435960848 435961889 1041 False 1827.0 1827 98.27900 3092 4136 1 chr7A.!!$F1 1044
7 TraesCS5B01G127900 chr3A 710254527 710255574 1047 True 1840.0 1840 98.37800 3090 4136 1 chr3A.!!$R1 1046
8 TraesCS5B01G127900 chr5A 665426893 665427940 1047 False 1823.0 1823 98.09300 3090 4136 1 chr5A.!!$F1 1046
9 TraesCS5B01G127900 chr5A 290112614 290115137 2523 False 882.5 1657 93.06375 316 3090 4 chr5A.!!$F2 2774
10 TraesCS5B01G127900 chr4B 24666289 24667336 1047 False 1807.0 1807 97.80500 3090 4136 1 chr4B.!!$F1 1046
11 TraesCS5B01G127900 chr5D 217420751 217423296 2545 False 940.5 1724 93.66075 316 3090 4 chr5D.!!$F1 2774

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 863 0.032678 AGAGTGCAAGACAGTGACGG 59.967 55.000 0.00 0.00 29.71 4.79 F
1272 1290 0.240945 CGGTCAACCATGGTTCTTGC 59.759 55.000 27.56 16.08 36.00 4.01 F
1823 1854 0.322546 ATTCCGGTTGCCAAGAGTCC 60.323 55.000 0.00 0.00 0.00 3.85 F
2827 2861 1.804748 GAATCACAAGGTGTCCGTTCC 59.195 52.381 0.00 0.00 34.79 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2784 2818 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.0 0.00 3.28 R
2786 2820 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.0 0.00 4.37 R
3002 3040 1.443828 TGTGTAACACCGCAGCTGA 59.556 52.632 20.43 0.0 45.67 4.26 R
4101 4141 1.379044 CTCACCCCTGGCCATTCAC 60.379 63.158 5.51 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 3.708210 CGGGCACTGGTCCTTAGA 58.292 61.111 0.00 0.00 36.31 2.10
56 57 1.517832 CGGGCACTGGTCCTTAGAG 59.482 63.158 0.00 0.00 36.31 2.43
57 58 1.908483 GGGCACTGGTCCTTAGAGG 59.092 63.158 0.00 0.00 35.27 3.69
58 59 1.222113 GGCACTGGTCCTTAGAGGC 59.778 63.158 0.00 0.00 34.61 4.70
59 60 1.553690 GGCACTGGTCCTTAGAGGCA 61.554 60.000 0.00 0.00 34.61 4.75
60 61 0.391793 GCACTGGTCCTTAGAGGCAC 60.392 60.000 0.00 0.00 34.61 5.01
61 62 0.108615 CACTGGTCCTTAGAGGCACG 60.109 60.000 0.00 0.00 34.61 5.34
62 63 0.542232 ACTGGTCCTTAGAGGCACGT 60.542 55.000 0.00 0.00 34.61 4.49
63 64 0.108615 CTGGTCCTTAGAGGCACGTG 60.109 60.000 12.28 12.28 34.61 4.49
64 65 1.448013 GGTCCTTAGAGGCACGTGC 60.448 63.158 32.15 32.15 34.61 5.34
65 66 1.292223 GTCCTTAGAGGCACGTGCA 59.708 57.895 38.60 18.47 44.36 4.57
66 67 1.014564 GTCCTTAGAGGCACGTGCAC 61.015 60.000 38.60 30.08 44.36 4.57
67 68 1.005037 CCTTAGAGGCACGTGCACA 60.005 57.895 38.60 19.13 44.36 4.57
68 69 0.602638 CCTTAGAGGCACGTGCACAA 60.603 55.000 38.60 24.16 44.36 3.33
69 70 1.225855 CTTAGAGGCACGTGCACAAA 58.774 50.000 38.60 24.74 44.36 2.83
70 71 1.195448 CTTAGAGGCACGTGCACAAAG 59.805 52.381 38.60 28.73 44.36 2.77
71 72 0.391228 TAGAGGCACGTGCACAAAGA 59.609 50.000 38.60 17.55 44.36 2.52
72 73 0.250467 AGAGGCACGTGCACAAAGAT 60.250 50.000 38.60 16.65 44.36 2.40
73 74 0.593128 GAGGCACGTGCACAAAGATT 59.407 50.000 38.60 14.89 44.36 2.40
74 75 1.001378 GAGGCACGTGCACAAAGATTT 60.001 47.619 38.60 13.89 44.36 2.17
75 76 1.408702 AGGCACGTGCACAAAGATTTT 59.591 42.857 38.60 9.62 44.36 1.82
76 77 2.159114 AGGCACGTGCACAAAGATTTTT 60.159 40.909 38.60 8.96 44.36 1.94
77 78 2.218530 GGCACGTGCACAAAGATTTTTC 59.781 45.455 38.60 15.15 44.36 2.29
78 79 2.097925 GCACGTGCACAAAGATTTTTCG 60.098 45.455 34.52 0.02 41.59 3.46
79 80 2.467305 CACGTGCACAAAGATTTTTCGG 59.533 45.455 18.64 0.00 0.00 4.30
80 81 2.098443 ACGTGCACAAAGATTTTTCGGT 59.902 40.909 18.64 0.00 0.00 4.69
81 82 3.112580 CGTGCACAAAGATTTTTCGGTT 58.887 40.909 18.64 0.00 0.00 4.44
82 83 3.061271 CGTGCACAAAGATTTTTCGGTTG 60.061 43.478 18.64 0.00 0.00 3.77
83 84 3.862845 GTGCACAAAGATTTTTCGGTTGT 59.137 39.130 13.17 0.00 32.78 3.32
84 85 4.026886 GTGCACAAAGATTTTTCGGTTGTC 60.027 41.667 13.17 0.00 30.20 3.18
85 86 4.109050 GCACAAAGATTTTTCGGTTGTCA 58.891 39.130 0.00 0.00 30.20 3.58
86 87 4.744631 GCACAAAGATTTTTCGGTTGTCAT 59.255 37.500 0.00 0.00 30.20 3.06
87 88 5.107875 GCACAAAGATTTTTCGGTTGTCATC 60.108 40.000 0.00 0.00 30.20 2.92
88 89 5.115472 CACAAAGATTTTTCGGTTGTCATCG 59.885 40.000 0.00 0.00 30.20 3.84
89 90 5.008217 ACAAAGATTTTTCGGTTGTCATCGA 59.992 36.000 0.00 0.00 0.00 3.59
90 91 4.663636 AGATTTTTCGGTTGTCATCGAC 57.336 40.909 0.00 0.00 34.99 4.20
91 92 4.062293 AGATTTTTCGGTTGTCATCGACA 58.938 39.130 0.00 0.00 41.09 4.35
100 101 2.455674 TGTCATCGACAAGGTCAAGG 57.544 50.000 0.00 0.00 39.78 3.61
101 102 1.079503 GTCATCGACAAGGTCAAGGC 58.920 55.000 0.00 0.00 32.09 4.35
102 103 0.389817 TCATCGACAAGGTCAAGGCG 60.390 55.000 0.00 0.00 32.09 5.52
103 104 1.079127 ATCGACAAGGTCAAGGCGG 60.079 57.895 0.00 0.00 32.09 6.13
104 105 3.423154 CGACAAGGTCAAGGCGGC 61.423 66.667 0.00 0.00 32.09 6.53
105 106 2.032681 GACAAGGTCAAGGCGGCT 59.967 61.111 5.25 5.25 32.09 5.52
106 107 2.032681 ACAAGGTCAAGGCGGCTC 59.967 61.111 13.70 0.00 0.00 4.70
107 108 2.747855 CAAGGTCAAGGCGGCTCC 60.748 66.667 13.70 9.85 0.00 4.70
108 109 4.394712 AAGGTCAAGGCGGCTCCG 62.395 66.667 13.70 7.03 40.77 4.63
111 112 3.766691 GTCAAGGCGGCTCCGGTA 61.767 66.667 13.70 0.00 40.77 4.02
112 113 2.762459 TCAAGGCGGCTCCGGTAT 60.762 61.111 13.70 0.00 40.77 2.73
113 114 1.456145 TCAAGGCGGCTCCGGTATA 60.456 57.895 13.70 0.00 40.77 1.47
114 115 1.006102 CAAGGCGGCTCCGGTATAG 60.006 63.158 13.70 0.00 40.77 1.31
115 116 2.207924 AAGGCGGCTCCGGTATAGG 61.208 63.158 13.70 0.00 40.77 2.57
116 117 2.599578 GGCGGCTCCGGTATAGGA 60.600 66.667 10.57 0.00 40.19 2.94
122 123 3.759544 TCCGGTATAGGAGCAGCG 58.240 61.111 0.00 0.00 34.92 5.18
123 124 1.149854 TCCGGTATAGGAGCAGCGA 59.850 57.895 0.00 0.00 37.85 4.93
124 125 1.170919 TCCGGTATAGGAGCAGCGAC 61.171 60.000 0.00 0.00 37.85 5.19
125 126 1.173444 CCGGTATAGGAGCAGCGACT 61.173 60.000 0.00 0.00 37.85 4.18
126 127 0.039978 CGGTATAGGAGCAGCGACTG 60.040 60.000 2.50 2.92 37.85 3.51
149 150 3.257561 CATCGGCGGCTCGTTCTG 61.258 66.667 7.21 0.00 0.00 3.02
150 151 3.449227 ATCGGCGGCTCGTTCTGA 61.449 61.111 7.21 0.00 0.00 3.27
151 152 3.001902 ATCGGCGGCTCGTTCTGAA 62.002 57.895 7.21 0.00 0.00 3.02
152 153 2.501223 ATCGGCGGCTCGTTCTGAAA 62.501 55.000 7.21 0.00 0.00 2.69
153 154 2.730672 CGGCGGCTCGTTCTGAAAG 61.731 63.158 7.61 0.00 0.00 2.62
154 155 2.476499 GCGGCTCGTTCTGAAAGC 59.524 61.111 5.68 5.68 35.27 3.51
155 156 2.772189 CGGCTCGTTCTGAAAGCG 59.228 61.111 7.72 1.77 36.89 4.68
156 157 2.730672 CGGCTCGTTCTGAAAGCGG 61.731 63.158 7.72 7.40 36.89 5.52
157 158 1.668151 GGCTCGTTCTGAAAGCGGT 60.668 57.895 7.72 0.00 36.89 5.68
158 159 0.389426 GGCTCGTTCTGAAAGCGGTA 60.389 55.000 7.72 0.00 36.89 4.02
159 160 0.992802 GCTCGTTCTGAAAGCGGTAG 59.007 55.000 0.00 0.00 0.00 3.18
160 161 1.669211 GCTCGTTCTGAAAGCGGTAGT 60.669 52.381 0.00 0.00 0.00 2.73
161 162 1.986378 CTCGTTCTGAAAGCGGTAGTG 59.014 52.381 0.00 0.00 0.00 2.74
162 163 1.068474 CGTTCTGAAAGCGGTAGTGG 58.932 55.000 0.00 0.00 0.00 4.00
163 164 1.604693 CGTTCTGAAAGCGGTAGTGGT 60.605 52.381 0.00 0.00 0.00 4.16
164 165 2.067013 GTTCTGAAAGCGGTAGTGGTC 58.933 52.381 0.00 0.00 0.00 4.02
165 166 0.242825 TCTGAAAGCGGTAGTGGTCG 59.757 55.000 0.00 0.00 0.00 4.79
166 167 0.038526 CTGAAAGCGGTAGTGGTCGT 60.039 55.000 0.00 0.00 0.00 4.34
167 168 0.390124 TGAAAGCGGTAGTGGTCGTT 59.610 50.000 0.00 0.00 0.00 3.85
168 169 1.066136 GAAAGCGGTAGTGGTCGTTC 58.934 55.000 0.00 0.00 0.00 3.95
169 170 0.665369 AAAGCGGTAGTGGTCGTTCG 60.665 55.000 0.00 0.00 0.00 3.95
170 171 2.482296 AAGCGGTAGTGGTCGTTCGG 62.482 60.000 0.00 0.00 0.00 4.30
171 172 2.956987 CGGTAGTGGTCGTTCGGT 59.043 61.111 0.00 0.00 0.00 4.69
172 173 1.443194 CGGTAGTGGTCGTTCGGTG 60.443 63.158 0.00 0.00 0.00 4.94
173 174 1.080298 GGTAGTGGTCGTTCGGTGG 60.080 63.158 0.00 0.00 0.00 4.61
174 175 1.662044 GTAGTGGTCGTTCGGTGGT 59.338 57.895 0.00 0.00 0.00 4.16
175 176 0.387750 GTAGTGGTCGTTCGGTGGTC 60.388 60.000 0.00 0.00 0.00 4.02
176 177 0.538057 TAGTGGTCGTTCGGTGGTCT 60.538 55.000 0.00 0.00 0.00 3.85
177 178 1.372623 GTGGTCGTTCGGTGGTCTC 60.373 63.158 0.00 0.00 0.00 3.36
178 179 1.829096 TGGTCGTTCGGTGGTCTCA 60.829 57.895 0.00 0.00 0.00 3.27
179 180 1.080705 GGTCGTTCGGTGGTCTCAG 60.081 63.158 0.00 0.00 0.00 3.35
180 181 1.521450 GGTCGTTCGGTGGTCTCAGA 61.521 60.000 0.00 0.00 0.00 3.27
181 182 0.313043 GTCGTTCGGTGGTCTCAGAA 59.687 55.000 0.00 0.00 0.00 3.02
182 183 1.067776 GTCGTTCGGTGGTCTCAGAAT 60.068 52.381 0.00 0.00 0.00 2.40
183 184 1.201647 TCGTTCGGTGGTCTCAGAATC 59.798 52.381 0.00 0.00 0.00 2.52
184 185 1.202582 CGTTCGGTGGTCTCAGAATCT 59.797 52.381 0.00 0.00 0.00 2.40
185 186 2.732597 CGTTCGGTGGTCTCAGAATCTC 60.733 54.545 0.00 0.00 0.00 2.75
186 187 2.215942 TCGGTGGTCTCAGAATCTCA 57.784 50.000 0.00 0.00 0.00 3.27
187 188 2.525368 TCGGTGGTCTCAGAATCTCAA 58.475 47.619 0.00 0.00 0.00 3.02
188 189 3.099905 TCGGTGGTCTCAGAATCTCAAT 58.900 45.455 0.00 0.00 0.00 2.57
189 190 3.118992 TCGGTGGTCTCAGAATCTCAATG 60.119 47.826 0.00 0.00 0.00 2.82
190 191 3.368843 CGGTGGTCTCAGAATCTCAATGT 60.369 47.826 0.00 0.00 0.00 2.71
191 192 4.142160 CGGTGGTCTCAGAATCTCAATGTA 60.142 45.833 0.00 0.00 0.00 2.29
192 193 5.624509 CGGTGGTCTCAGAATCTCAATGTAA 60.625 44.000 0.00 0.00 0.00 2.41
193 194 5.814705 GGTGGTCTCAGAATCTCAATGTAAG 59.185 44.000 0.00 0.00 0.00 2.34
194 195 6.402222 GTGGTCTCAGAATCTCAATGTAAGT 58.598 40.000 0.00 0.00 0.00 2.24
195 196 6.876257 GTGGTCTCAGAATCTCAATGTAAGTT 59.124 38.462 0.00 0.00 0.00 2.66
196 197 7.389053 GTGGTCTCAGAATCTCAATGTAAGTTT 59.611 37.037 0.00 0.00 0.00 2.66
197 198 7.939039 TGGTCTCAGAATCTCAATGTAAGTTTT 59.061 33.333 0.00 0.00 0.00 2.43
198 199 8.787852 GGTCTCAGAATCTCAATGTAAGTTTTT 58.212 33.333 0.00 0.00 0.00 1.94
214 215 9.685828 TGTAAGTTTTTATTATGTTTGAGGTGC 57.314 29.630 0.00 0.00 0.00 5.01
215 216 9.908152 GTAAGTTTTTATTATGTTTGAGGTGCT 57.092 29.630 0.00 0.00 0.00 4.40
219 220 9.855021 GTTTTTATTATGTTTGAGGTGCTATGT 57.145 29.630 0.00 0.00 0.00 2.29
222 223 9.461312 TTTATTATGTTTGAGGTGCTATGTTCT 57.539 29.630 0.00 0.00 0.00 3.01
223 224 7.944729 ATTATGTTTGAGGTGCTATGTTCTT 57.055 32.000 0.00 0.00 0.00 2.52
224 225 7.759489 TTATGTTTGAGGTGCTATGTTCTTT 57.241 32.000 0.00 0.00 0.00 2.52
225 226 5.689383 TGTTTGAGGTGCTATGTTCTTTC 57.311 39.130 0.00 0.00 0.00 2.62
226 227 5.129634 TGTTTGAGGTGCTATGTTCTTTCA 58.870 37.500 0.00 0.00 0.00 2.69
227 228 5.592282 TGTTTGAGGTGCTATGTTCTTTCAA 59.408 36.000 0.00 0.00 0.00 2.69
228 229 6.265196 TGTTTGAGGTGCTATGTTCTTTCAAT 59.735 34.615 0.00 0.00 0.00 2.57
229 230 5.885230 TGAGGTGCTATGTTCTTTCAATG 57.115 39.130 0.00 0.00 0.00 2.82
230 231 5.559770 TGAGGTGCTATGTTCTTTCAATGA 58.440 37.500 0.00 0.00 0.00 2.57
231 232 6.003326 TGAGGTGCTATGTTCTTTCAATGAA 58.997 36.000 0.00 0.00 0.00 2.57
232 233 6.072508 TGAGGTGCTATGTTCTTTCAATGAAC 60.073 38.462 8.84 8.84 42.77 3.18
233 234 6.006449 AGGTGCTATGTTCTTTCAATGAACT 58.994 36.000 15.20 5.83 42.86 3.01
234 235 6.491403 AGGTGCTATGTTCTTTCAATGAACTT 59.509 34.615 15.20 11.93 42.86 2.66
235 236 7.014615 AGGTGCTATGTTCTTTCAATGAACTTT 59.985 33.333 15.20 7.31 42.86 2.66
236 237 7.115378 GGTGCTATGTTCTTTCAATGAACTTTG 59.885 37.037 15.20 11.40 42.86 2.77
237 238 7.862372 GTGCTATGTTCTTTCAATGAACTTTGA 59.138 33.333 15.20 0.00 42.86 2.69
238 239 8.579006 TGCTATGTTCTTTCAATGAACTTTGAT 58.421 29.630 15.20 5.28 42.86 2.57
260 261 8.988064 TGATAATAGACCTAGATCATTTTCGC 57.012 34.615 0.00 0.00 0.00 4.70
261 262 8.585018 TGATAATAGACCTAGATCATTTTCGCA 58.415 33.333 0.00 0.00 0.00 5.10
262 263 9.424319 GATAATAGACCTAGATCATTTTCGCAA 57.576 33.333 0.00 0.00 0.00 4.85
263 264 9.778741 ATAATAGACCTAGATCATTTTCGCAAA 57.221 29.630 0.00 0.00 0.00 3.68
264 265 8.506168 AATAGACCTAGATCATTTTCGCAAAA 57.494 30.769 0.00 0.00 34.41 2.44
265 266 6.817765 AGACCTAGATCATTTTCGCAAAAA 57.182 33.333 0.00 0.00 38.66 1.94
293 294 5.959618 AAAAACTAGTGGCACTGGAATAC 57.040 39.130 33.75 0.00 30.59 1.89
294 295 3.629142 AACTAGTGGCACTGGAATACC 57.371 47.619 33.75 0.00 30.59 2.73
295 296 2.834113 ACTAGTGGCACTGGAATACCT 58.166 47.619 33.75 10.62 37.04 3.08
296 297 3.182152 ACTAGTGGCACTGGAATACCTT 58.818 45.455 33.75 9.90 37.04 3.50
297 298 3.587506 ACTAGTGGCACTGGAATACCTTT 59.412 43.478 33.75 9.17 37.04 3.11
298 299 3.525800 AGTGGCACTGGAATACCTTTT 57.474 42.857 21.37 0.00 37.04 2.27
299 300 4.650972 AGTGGCACTGGAATACCTTTTA 57.349 40.909 21.37 0.00 37.04 1.52
300 301 4.993028 AGTGGCACTGGAATACCTTTTAA 58.007 39.130 21.37 0.00 37.04 1.52
301 302 5.010282 AGTGGCACTGGAATACCTTTTAAG 58.990 41.667 21.37 0.00 37.04 1.85
364 365 2.425668 GCCTGGTGTTGTAAAACTGTGT 59.574 45.455 0.00 0.00 0.00 3.72
371 372 3.191669 GTTGTAAAACTGTGTTTGGGCC 58.808 45.455 0.00 0.00 0.00 5.80
450 453 3.366052 AGGACTAATTGCCGGACAAAT 57.634 42.857 5.05 4.94 42.86 2.32
462 465 4.460731 TGCCGGACAAATTTACATTCATGA 59.539 37.500 5.05 0.00 0.00 3.07
471 474 7.389330 ACAAATTTACATTCATGACACGTAGGA 59.611 33.333 0.00 0.00 0.00 2.94
496 499 2.093973 CCAATAGATCTAGCCGGCGAAT 60.094 50.000 23.20 15.95 0.00 3.34
502 505 2.202824 TAGCCGGCGAATTCCACG 60.203 61.111 23.20 8.90 0.00 4.94
525 528 0.322816 CCACTGCCACATAAGCCTGT 60.323 55.000 0.00 0.00 0.00 4.00
528 531 1.339438 ACTGCCACATAAGCCTGTCAG 60.339 52.381 0.00 0.00 30.99 3.51
529 532 0.692476 TGCCACATAAGCCTGTCAGT 59.308 50.000 0.00 0.00 0.00 3.41
555 558 0.541863 ATGGCTTAGAACCGTCAGGG 59.458 55.000 0.00 0.00 43.47 4.45
557 560 1.810030 GCTTAGAACCGTCAGGGCG 60.810 63.158 0.00 0.00 43.47 6.13
563 566 4.760047 ACCGTCAGGGCGTCATGC 62.760 66.667 0.00 0.00 43.47 4.06
582 585 1.811266 CAGCGACCACCTCCGATTG 60.811 63.158 0.00 0.00 0.00 2.67
587 590 0.541863 GACCACCTCCGATTGACCAT 59.458 55.000 0.00 0.00 0.00 3.55
594 597 3.200825 ACCTCCGATTGACCATGAAAGAT 59.799 43.478 0.00 0.00 0.00 2.40
602 605 5.902613 TTGACCATGAAAGATAGGCAAAG 57.097 39.130 0.00 0.00 0.00 2.77
749 752 1.382522 AGAACAGTGGCCATAATGCG 58.617 50.000 9.72 0.00 0.00 4.73
816 819 6.453643 CGACCAAGTAATCGGAATAATCTG 57.546 41.667 0.00 0.00 34.67 2.90
860 863 0.032678 AGAGTGCAAGACAGTGACGG 59.967 55.000 0.00 0.00 29.71 4.79
971 974 4.947147 AGGCCGGCAGCAAACGAA 62.947 61.111 30.85 0.00 46.50 3.85
1073 1087 2.353610 GGGTGCTCAAGCCATTGGG 61.354 63.158 4.53 0.00 46.46 4.12
1268 1286 2.253513 CCACGGTCAACCATGGTTC 58.746 57.895 27.56 16.81 43.99 3.62
1271 1289 1.266718 CACGGTCAACCATGGTTCTTG 59.733 52.381 27.56 17.50 36.00 3.02
1272 1290 0.240945 CGGTCAACCATGGTTCTTGC 59.759 55.000 27.56 16.08 36.00 4.01
1356 1377 1.451567 CACTCTGATGGGGCAGCTG 60.452 63.158 10.11 10.11 35.86 4.24
1368 1389 2.808315 CAGCTGGCCGACGAGTAT 59.192 61.111 5.57 0.00 0.00 2.12
1426 1447 4.656112 CCTCCATCATCCCTTACAGTAACT 59.344 45.833 0.00 0.00 0.00 2.24
1440 1461 8.932791 CCTTACAGTAACTACACGATTCATTTT 58.067 33.333 0.00 0.00 0.00 1.82
1441 1462 9.953825 CTTACAGTAACTACACGATTCATTTTC 57.046 33.333 0.00 0.00 0.00 2.29
1448 1469 6.942976 ACTACACGATTCATTTTCCTTCCTA 58.057 36.000 0.00 0.00 0.00 2.94
1449 1470 6.817140 ACTACACGATTCATTTTCCTTCCTAC 59.183 38.462 0.00 0.00 0.00 3.18
1450 1471 4.941873 ACACGATTCATTTTCCTTCCTACC 59.058 41.667 0.00 0.00 0.00 3.18
1451 1472 5.186198 CACGATTCATTTTCCTTCCTACCT 58.814 41.667 0.00 0.00 0.00 3.08
1452 1473 5.648092 CACGATTCATTTTCCTTCCTACCTT 59.352 40.000 0.00 0.00 0.00 3.50
1453 1474 5.880887 ACGATTCATTTTCCTTCCTACCTTC 59.119 40.000 0.00 0.00 0.00 3.46
1454 1475 5.006746 CGATTCATTTTCCTTCCTACCTTCG 59.993 44.000 0.00 0.00 0.00 3.79
1455 1476 4.903045 TCATTTTCCTTCCTACCTTCGT 57.097 40.909 0.00 0.00 0.00 3.85
1456 1477 5.237236 TCATTTTCCTTCCTACCTTCGTT 57.763 39.130 0.00 0.00 0.00 3.85
1457 1478 5.243207 TCATTTTCCTTCCTACCTTCGTTC 58.757 41.667 0.00 0.00 0.00 3.95
1458 1479 3.690475 TTTCCTTCCTACCTTCGTTCC 57.310 47.619 0.00 0.00 0.00 3.62
1459 1480 2.617840 TCCTTCCTACCTTCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
1460 1481 3.744940 TCCTTCCTACCTTCGTTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
1461 1482 4.051661 TCCTTCCTACCTTCGTTCCTAA 57.948 45.455 0.00 0.00 0.00 2.69
1462 1483 4.419282 TCCTTCCTACCTTCGTTCCTAAA 58.581 43.478 0.00 0.00 0.00 1.85
1463 1484 5.028131 TCCTTCCTACCTTCGTTCCTAAAT 58.972 41.667 0.00 0.00 0.00 1.40
1464 1485 6.197168 TCCTTCCTACCTTCGTTCCTAAATA 58.803 40.000 0.00 0.00 0.00 1.40
1465 1486 6.097412 TCCTTCCTACCTTCGTTCCTAAATAC 59.903 42.308 0.00 0.00 0.00 1.89
1466 1487 6.097981 CCTTCCTACCTTCGTTCCTAAATACT 59.902 42.308 0.00 0.00 0.00 2.12
1467 1488 7.286316 CCTTCCTACCTTCGTTCCTAAATACTA 59.714 40.741 0.00 0.00 0.00 1.82
1468 1489 8.773033 TTCCTACCTTCGTTCCTAAATACTAT 57.227 34.615 0.00 0.00 0.00 2.12
1469 1490 9.866655 TTCCTACCTTCGTTCCTAAATACTATA 57.133 33.333 0.00 0.00 0.00 1.31
1470 1491 9.866655 TCCTACCTTCGTTCCTAAATACTATAA 57.133 33.333 0.00 0.00 0.00 0.98
1474 1495 9.418839 ACCTTCGTTCCTAAATACTATAAGTCT 57.581 33.333 0.00 0.00 0.00 3.24
1477 1498 9.941664 TTCGTTCCTAAATACTATAAGTCTTCG 57.058 33.333 0.00 0.00 0.00 3.79
1478 1499 9.113838 TCGTTCCTAAATACTATAAGTCTTCGT 57.886 33.333 0.00 0.00 0.00 3.85
1494 1515 8.480643 AAGTCTTCGTAGAAATTTCACTATGG 57.519 34.615 19.99 6.44 45.90 2.74
1495 1516 7.837863 AGTCTTCGTAGAAATTTCACTATGGA 58.162 34.615 19.99 8.45 45.90 3.41
1496 1517 7.760340 AGTCTTCGTAGAAATTTCACTATGGAC 59.240 37.037 19.99 17.70 45.90 4.02
1497 1518 7.010275 GTCTTCGTAGAAATTTCACTATGGACC 59.990 40.741 19.99 0.00 45.90 4.46
1498 1519 6.288941 TCGTAGAAATTTCACTATGGACCA 57.711 37.500 19.99 0.00 0.00 4.02
1499 1520 6.103997 TCGTAGAAATTTCACTATGGACCAC 58.896 40.000 19.99 2.01 0.00 4.16
1500 1521 5.872617 CGTAGAAATTTCACTATGGACCACA 59.127 40.000 19.99 0.00 0.00 4.17
1501 1522 6.538742 CGTAGAAATTTCACTATGGACCACAT 59.461 38.462 19.99 0.00 43.68 3.21
1502 1523 7.709182 CGTAGAAATTTCACTATGGACCACATA 59.291 37.037 19.99 0.00 41.03 2.29
1503 1524 7.865706 AGAAATTTCACTATGGACCACATAC 57.134 36.000 19.99 0.00 41.03 2.39
1504 1525 6.538742 AGAAATTTCACTATGGACCACATACG 59.461 38.462 19.99 0.00 41.03 3.06
1505 1526 5.607939 ATTTCACTATGGACCACATACGA 57.392 39.130 0.00 0.00 41.03 3.43
1506 1527 5.408880 TTTCACTATGGACCACATACGAA 57.591 39.130 0.00 0.00 41.03 3.85
1507 1528 5.607939 TTCACTATGGACCACATACGAAT 57.392 39.130 0.00 0.00 41.03 3.34
1508 1529 4.944048 TCACTATGGACCACATACGAATG 58.056 43.478 0.00 0.00 41.03 2.67
1510 1531 5.595133 TCACTATGGACCACATACGAATGTA 59.405 40.000 0.00 0.00 44.70 2.29
1511 1532 6.266786 TCACTATGGACCACATACGAATGTAT 59.733 38.462 0.00 0.00 44.70 2.29
1527 1548 8.887036 ACGAATGTATGTAGATGCATTTTAGA 57.113 30.769 15.62 0.00 42.85 2.10
1528 1549 8.982685 ACGAATGTATGTAGATGCATTTTAGAG 58.017 33.333 15.62 8.96 42.85 2.43
1529 1550 8.982685 CGAATGTATGTAGATGCATTTTAGAGT 58.017 33.333 15.62 0.00 42.85 3.24
1551 1572 9.282569 AGAGTATAGATTCATTCATTTTGCTCC 57.717 33.333 0.00 0.00 0.00 4.70
1552 1573 8.092521 AGTATAGATTCATTCATTTTGCTCCG 57.907 34.615 0.00 0.00 0.00 4.63
1553 1574 6.949352 ATAGATTCATTCATTTTGCTCCGT 57.051 33.333 0.00 0.00 0.00 4.69
1554 1575 8.988934 GTATAGATTCATTCATTTTGCTCCGTA 58.011 33.333 0.00 0.00 0.00 4.02
1555 1576 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
1556 1577 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
1557 1578 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
1558 1579 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
1559 1580 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
1560 1581 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
1561 1582 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
1562 1583 5.339008 TCATTTTGCTCCGTATGTAGTCT 57.661 39.130 0.00 0.00 0.00 3.24
1563 1584 6.459670 TCATTTTGCTCCGTATGTAGTCTA 57.540 37.500 0.00 0.00 0.00 2.59
1564 1585 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
1565 1586 8.173542 TCATTTTGCTCCGTATGTAGTCTATA 57.826 34.615 0.00 0.00 0.00 1.31
1566 1587 8.297426 TCATTTTGCTCCGTATGTAGTCTATAG 58.703 37.037 0.00 0.00 0.00 1.31
1567 1588 7.578310 TTTTGCTCCGTATGTAGTCTATAGT 57.422 36.000 0.00 0.00 0.00 2.12
1568 1589 6.555812 TTGCTCCGTATGTAGTCTATAGTG 57.444 41.667 0.00 0.00 0.00 2.74
1569 1590 5.861727 TGCTCCGTATGTAGTCTATAGTGA 58.138 41.667 0.00 0.00 0.00 3.41
1570 1591 6.293698 TGCTCCGTATGTAGTCTATAGTGAA 58.706 40.000 0.00 0.00 0.00 3.18
1571 1592 6.769341 TGCTCCGTATGTAGTCTATAGTGAAA 59.231 38.462 0.00 0.00 0.00 2.69
1572 1593 7.447545 TGCTCCGTATGTAGTCTATAGTGAAAT 59.552 37.037 0.00 0.00 0.00 2.17
1573 1594 7.964011 GCTCCGTATGTAGTCTATAGTGAAATC 59.036 40.741 0.00 0.00 0.00 2.17
1574 1595 9.221933 CTCCGTATGTAGTCTATAGTGAAATCT 57.778 37.037 0.00 0.00 0.00 2.40
1575 1596 9.217278 TCCGTATGTAGTCTATAGTGAAATCTC 57.783 37.037 0.00 0.00 0.00 2.75
1576 1597 9.221933 CCGTATGTAGTCTATAGTGAAATCTCT 57.778 37.037 0.00 0.00 0.00 3.10
1603 1624 9.379791 ACAAAGACTTATATTTAAGAACGGAGG 57.620 33.333 9.58 0.00 38.56 4.30
1604 1625 8.827677 CAAAGACTTATATTTAAGAACGGAGGG 58.172 37.037 9.58 0.00 38.56 4.30
1605 1626 7.909485 AGACTTATATTTAAGAACGGAGGGA 57.091 36.000 9.58 0.00 38.56 4.20
1606 1627 7.953752 AGACTTATATTTAAGAACGGAGGGAG 58.046 38.462 9.58 0.00 38.56 4.30
1607 1628 7.564292 AGACTTATATTTAAGAACGGAGGGAGT 59.436 37.037 9.58 0.00 38.56 3.85
1608 1629 8.773033 ACTTATATTTAAGAACGGAGGGAGTA 57.227 34.615 9.58 0.00 38.56 2.59
1628 1649 9.327628 GGGAGTATTTTACAAGATTTCTACTCC 57.672 37.037 14.23 14.23 46.90 3.85
1648 1669 7.530426 ACTCCTTTTTGAATTAGCAATCAGT 57.470 32.000 0.00 0.00 0.00 3.41
1660 1681 9.928236 GAATTAGCAATCAGTCTTTCATAACTC 57.072 33.333 0.00 0.00 0.00 3.01
1670 1701 7.931407 TCAGTCTTTCATAACTCTTGCTTGTTA 59.069 33.333 0.00 0.00 33.87 2.41
1711 1742 1.079405 CACCAAGGTCGCCGTGTAT 60.079 57.895 9.92 0.00 31.23 2.29
1732 1763 1.037493 TCTACCTTGTCACACGCACT 58.963 50.000 0.00 0.00 0.00 4.40
1756 1787 1.490069 TCATTCATGATCGGCCAAGGA 59.510 47.619 2.24 0.00 0.00 3.36
1806 1837 0.870307 GTATGTGCTCGACGGCGATT 60.870 55.000 16.81 0.00 46.80 3.34
1823 1854 0.322546 ATTCCGGTTGCCAAGAGTCC 60.323 55.000 0.00 0.00 0.00 3.85
1835 1866 3.760684 GCCAAGAGTCCAAAATCTGACAT 59.239 43.478 0.00 0.00 33.89 3.06
1840 1871 7.383300 CCAAGAGTCCAAAATCTGACATTTTTC 59.617 37.037 0.00 0.00 33.89 2.29
1846 1877 5.636543 CCAAAATCTGACATTTTTCTCTGCC 59.363 40.000 0.00 0.00 0.00 4.85
1847 1878 6.218019 CAAAATCTGACATTTTTCTCTGCCA 58.782 36.000 0.00 0.00 0.00 4.92
2016 2050 1.915614 AACTTGCTGCGCTTCATCGG 61.916 55.000 9.73 3.04 0.00 4.18
2263 2297 9.459640 CATTAGCATGATCAAAATCAAGTAAGG 57.540 33.333 0.00 0.00 44.85 2.69
2264 2298 6.461110 AGCATGATCAAAATCAAGTAAGGG 57.539 37.500 0.00 0.00 44.85 3.95
2271 2305 9.753674 TGATCAAAATCAAGTAAGGGACTATTT 57.246 29.630 0.00 0.00 36.87 1.40
2359 2393 6.280643 GTTGAGTAATTTGCTGGTCCTTTTT 58.719 36.000 0.00 0.00 0.00 1.94
2405 2439 5.788531 CGCTAATGTTTTCAAGTAGGAAACG 59.211 40.000 0.00 0.00 36.56 3.60
2417 2451 2.863401 AGGAAACGGTTTGCAACTTC 57.137 45.000 23.96 3.25 32.92 3.01
2422 2456 4.023536 GGAAACGGTTTGCAACTTCTGATA 60.024 41.667 18.55 0.00 0.00 2.15
2423 2457 5.506649 GGAAACGGTTTGCAACTTCTGATAA 60.507 40.000 18.55 0.00 0.00 1.75
2426 2460 6.084326 ACGGTTTGCAACTTCTGATAAAAT 57.916 33.333 0.00 0.00 0.00 1.82
2427 2461 6.512297 ACGGTTTGCAACTTCTGATAAAATT 58.488 32.000 0.00 0.00 0.00 1.82
2428 2462 7.653647 ACGGTTTGCAACTTCTGATAAAATTA 58.346 30.769 0.00 0.00 0.00 1.40
2429 2463 8.138712 ACGGTTTGCAACTTCTGATAAAATTAA 58.861 29.630 0.00 0.00 0.00 1.40
2430 2464 9.139174 CGGTTTGCAACTTCTGATAAAATTAAT 57.861 29.630 0.00 0.00 0.00 1.40
2600 2634 8.452534 CGTCTCAGTTCTGTTTTACTCTACTAT 58.547 37.037 0.00 0.00 0.00 2.12
2643 2677 5.448768 GCCAGTTCATCTTCATCTCATGTTG 60.449 44.000 0.00 0.00 0.00 3.33
2778 2812 7.934457 ACTAAAGTTAGTACAAAGTCGAGACA 58.066 34.615 5.99 0.00 41.92 3.41
2779 2813 7.859875 ACTAAAGTTAGTACAAAGTCGAGACAC 59.140 37.037 5.99 0.00 41.92 3.67
2780 2814 6.388435 AAGTTAGTACAAAGTCGAGACACT 57.612 37.500 5.99 2.70 0.00 3.55
2781 2815 6.388435 AGTTAGTACAAAGTCGAGACACTT 57.612 37.500 5.99 0.00 38.30 3.16
2782 2816 7.502120 AGTTAGTACAAAGTCGAGACACTTA 57.498 36.000 5.99 0.00 35.45 2.24
2783 2817 8.108551 AGTTAGTACAAAGTCGAGACACTTAT 57.891 34.615 5.99 0.00 35.45 1.73
2784 2818 8.574737 AGTTAGTACAAAGTCGAGACACTTATT 58.425 33.333 5.99 0.00 35.45 1.40
2785 2819 9.189723 GTTAGTACAAAGTCGAGACACTTATTT 57.810 33.333 5.99 0.00 35.45 1.40
2786 2820 9.754382 TTAGTACAAAGTCGAGACACTTATTTT 57.246 29.630 5.99 0.00 35.45 1.82
2787 2821 8.073355 AGTACAAAGTCGAGACACTTATTTTG 57.927 34.615 5.99 8.46 35.45 2.44
2788 2822 6.300354 ACAAAGTCGAGACACTTATTTTGG 57.700 37.500 5.99 0.00 35.45 3.28
2789 2823 5.238650 ACAAAGTCGAGACACTTATTTTGGG 59.761 40.000 5.99 0.00 35.45 4.12
2790 2824 4.884668 AGTCGAGACACTTATTTTGGGA 57.115 40.909 5.99 0.00 0.00 4.37
2791 2825 4.566987 AGTCGAGACACTTATTTTGGGAC 58.433 43.478 5.99 0.00 0.00 4.46
2792 2826 3.367025 GTCGAGACACTTATTTTGGGACG 59.633 47.826 0.00 0.00 0.00 4.79
2793 2827 2.671396 CGAGACACTTATTTTGGGACGG 59.329 50.000 0.00 0.00 0.00 4.79
2794 2828 3.615592 CGAGACACTTATTTTGGGACGGA 60.616 47.826 0.00 0.00 0.00 4.69
2795 2829 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2796 2830 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2810 2844 3.959449 GGACGGAGGGAGTACTTTAGAAT 59.041 47.826 0.00 0.00 0.00 2.40
2820 2854 6.465084 GGAGTACTTTAGAATCACAAGGTGT 58.535 40.000 0.00 0.00 34.79 4.16
2823 2857 4.315803 ACTTTAGAATCACAAGGTGTCCG 58.684 43.478 0.00 0.00 34.79 4.79
2827 2861 1.804748 GAATCACAAGGTGTCCGTTCC 59.195 52.381 0.00 0.00 34.79 3.62
2851 2887 5.335113 CGGTGCATTATCCCATTGATAACAG 60.335 44.000 0.00 0.00 46.11 3.16
2872 2909 8.628882 AACAGTTGCAGTTTGTAGTAATTTTC 57.371 30.769 1.03 0.00 0.00 2.29
2875 2912 8.128582 CAGTTGCAGTTTGTAGTAATTTTCTCA 58.871 33.333 0.00 0.00 0.00 3.27
2901 2938 3.234353 TGCAGATACTGATACTCCCAGG 58.766 50.000 2.81 0.00 36.03 4.45
2948 2985 4.079558 AGGGAGTCCTGTGCATTTCAATAT 60.080 41.667 9.58 0.00 42.98 1.28
2956 2993 6.046593 CCTGTGCATTTCAATATTTGCATCT 58.953 36.000 13.98 0.00 45.80 2.90
3019 3057 0.443869 CATCAGCTGCGGTGTTACAC 59.556 55.000 9.47 6.99 32.43 2.90
3027 3065 3.666797 GCTGCGGTGTTACACAATTTAAC 59.333 43.478 17.67 0.00 35.86 2.01
3028 3066 4.790123 GCTGCGGTGTTACACAATTTAACA 60.790 41.667 17.67 3.53 37.15 2.41
3030 3068 5.035443 TGCGGTGTTACACAATTTAACAAC 58.965 37.500 17.67 6.51 41.74 3.32
3190 3228 6.380095 AAAAGTGCGTACAAAGTTCCATAA 57.620 33.333 6.38 0.00 0.00 1.90
3397 3436 2.241176 CCCAGTAACCAAATGCTCCCTA 59.759 50.000 0.00 0.00 0.00 3.53
3491 3530 9.559958 AATGAATTCGTGATGATCTGTTAAAAC 57.440 29.630 0.00 0.00 0.00 2.43
3642 3682 9.461312 TGAGTTATATTAAAAGCAATGTGGACT 57.539 29.630 0.00 0.00 0.00 3.85
4101 4141 8.182227 TGAGCAATACGATATAAAGACGGATAG 58.818 37.037 0.00 0.00 30.15 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.785453 CCAGTGCCCGGAAGCCTC 62.785 72.222 0.73 0.00 0.00 4.70
34 35 1.550130 TAAGGACCAGTGCCCGGAAG 61.550 60.000 0.73 0.00 0.00 3.46
35 36 1.536907 TAAGGACCAGTGCCCGGAA 60.537 57.895 0.73 0.00 0.00 4.30
36 37 1.987855 CTAAGGACCAGTGCCCGGA 60.988 63.158 0.73 0.00 0.00 5.14
37 38 1.961180 CTCTAAGGACCAGTGCCCGG 61.961 65.000 0.00 0.00 0.00 5.73
38 39 1.517832 CTCTAAGGACCAGTGCCCG 59.482 63.158 0.00 0.00 0.00 6.13
39 40 1.908483 CCTCTAAGGACCAGTGCCC 59.092 63.158 0.00 0.00 37.67 5.36
40 41 1.222113 GCCTCTAAGGACCAGTGCC 59.778 63.158 0.00 0.00 37.67 5.01
41 42 0.391793 GTGCCTCTAAGGACCAGTGC 60.392 60.000 0.00 0.00 37.67 4.40
42 43 0.108615 CGTGCCTCTAAGGACCAGTG 60.109 60.000 0.00 0.00 37.67 3.66
43 44 0.542232 ACGTGCCTCTAAGGACCAGT 60.542 55.000 0.00 0.00 37.67 4.00
44 45 0.108615 CACGTGCCTCTAAGGACCAG 60.109 60.000 0.82 0.00 37.67 4.00
45 46 1.972198 CACGTGCCTCTAAGGACCA 59.028 57.895 0.82 0.00 37.67 4.02
46 47 1.448013 GCACGTGCCTCTAAGGACC 60.448 63.158 30.12 0.00 37.67 4.46
47 48 1.014564 GTGCACGTGCCTCTAAGGAC 61.015 60.000 35.72 21.17 37.67 3.85
48 49 1.292223 GTGCACGTGCCTCTAAGGA 59.708 57.895 35.72 13.53 37.67 3.36
49 50 0.602638 TTGTGCACGTGCCTCTAAGG 60.603 55.000 35.72 0.00 41.18 2.69
50 51 1.195448 CTTTGTGCACGTGCCTCTAAG 59.805 52.381 35.72 30.20 41.18 2.18
51 52 1.202592 TCTTTGTGCACGTGCCTCTAA 60.203 47.619 35.72 26.54 41.18 2.10
52 53 0.391228 TCTTTGTGCACGTGCCTCTA 59.609 50.000 35.72 22.17 41.18 2.43
53 54 0.250467 ATCTTTGTGCACGTGCCTCT 60.250 50.000 35.72 11.97 41.18 3.69
54 55 0.593128 AATCTTTGTGCACGTGCCTC 59.407 50.000 35.72 27.34 41.18 4.70
55 56 1.032014 AAATCTTTGTGCACGTGCCT 58.968 45.000 35.72 9.62 41.18 4.75
56 57 1.851658 AAAATCTTTGTGCACGTGCC 58.148 45.000 35.72 26.31 41.18 5.01
57 58 2.097925 CGAAAAATCTTTGTGCACGTGC 60.098 45.455 33.11 33.11 42.50 5.34
58 59 2.467305 CCGAAAAATCTTTGTGCACGTG 59.533 45.455 12.28 12.28 0.00 4.49
59 60 2.098443 ACCGAAAAATCTTTGTGCACGT 59.902 40.909 13.13 0.00 0.00 4.49
60 61 2.726633 ACCGAAAAATCTTTGTGCACG 58.273 42.857 13.13 0.00 0.00 5.34
61 62 3.862845 ACAACCGAAAAATCTTTGTGCAC 59.137 39.130 10.75 10.75 0.00 4.57
62 63 4.109050 GACAACCGAAAAATCTTTGTGCA 58.891 39.130 0.00 0.00 30.60 4.57
63 64 4.109050 TGACAACCGAAAAATCTTTGTGC 58.891 39.130 0.00 0.00 30.60 4.57
64 65 5.115472 CGATGACAACCGAAAAATCTTTGTG 59.885 40.000 0.00 0.00 30.60 3.33
65 66 5.008217 TCGATGACAACCGAAAAATCTTTGT 59.992 36.000 1.48 0.00 33.12 2.83
66 67 5.339611 GTCGATGACAACCGAAAAATCTTTG 59.660 40.000 5.11 0.00 36.50 2.77
67 68 5.008217 TGTCGATGACAACCGAAAAATCTTT 59.992 36.000 5.11 0.00 39.78 2.52
68 69 4.513692 TGTCGATGACAACCGAAAAATCTT 59.486 37.500 5.11 0.00 39.78 2.40
69 70 4.062293 TGTCGATGACAACCGAAAAATCT 58.938 39.130 5.11 0.00 39.78 2.40
70 71 4.398549 TGTCGATGACAACCGAAAAATC 57.601 40.909 5.11 0.00 39.78 2.17
71 72 4.320202 CCTTGTCGATGACAACCGAAAAAT 60.320 41.667 8.21 0.00 45.88 1.82
72 73 3.002862 CCTTGTCGATGACAACCGAAAAA 59.997 43.478 8.21 3.52 45.88 1.94
73 74 2.546368 CCTTGTCGATGACAACCGAAAA 59.454 45.455 8.21 5.70 45.88 2.29
74 75 2.139917 CCTTGTCGATGACAACCGAAA 58.860 47.619 8.21 0.00 45.88 3.46
75 76 1.069513 ACCTTGTCGATGACAACCGAA 59.930 47.619 8.21 0.00 45.88 4.30
76 77 0.677288 ACCTTGTCGATGACAACCGA 59.323 50.000 8.21 0.00 45.88 4.69
77 78 1.068474 GACCTTGTCGATGACAACCG 58.932 55.000 8.21 4.77 45.88 4.44
78 79 2.163818 TGACCTTGTCGATGACAACC 57.836 50.000 8.21 2.63 45.88 3.77
79 80 2.480419 CCTTGACCTTGTCGATGACAAC 59.520 50.000 8.21 0.87 45.88 3.32
81 82 1.608025 GCCTTGACCTTGTCGATGACA 60.608 52.381 0.00 0.00 41.09 3.58
82 83 1.079503 GCCTTGACCTTGTCGATGAC 58.920 55.000 0.00 0.00 34.95 3.06
83 84 0.389817 CGCCTTGACCTTGTCGATGA 60.390 55.000 0.00 0.00 34.95 2.92
84 85 1.361668 CCGCCTTGACCTTGTCGATG 61.362 60.000 0.00 0.00 34.95 3.84
85 86 1.079127 CCGCCTTGACCTTGTCGAT 60.079 57.895 0.00 0.00 34.95 3.59
86 87 2.342279 CCGCCTTGACCTTGTCGA 59.658 61.111 0.00 0.00 34.95 4.20
87 88 3.423154 GCCGCCTTGACCTTGTCG 61.423 66.667 0.00 0.00 34.95 4.35
88 89 2.032681 AGCCGCCTTGACCTTGTC 59.967 61.111 0.00 0.00 0.00 3.18
89 90 2.032681 GAGCCGCCTTGACCTTGT 59.967 61.111 0.00 0.00 0.00 3.16
90 91 2.747855 GGAGCCGCCTTGACCTTG 60.748 66.667 0.00 0.00 0.00 3.61
91 92 4.394712 CGGAGCCGCCTTGACCTT 62.395 66.667 0.00 0.00 0.00 3.50
94 95 1.741327 TATACCGGAGCCGCCTTGAC 61.741 60.000 9.46 0.00 38.24 3.18
95 96 1.456145 TATACCGGAGCCGCCTTGA 60.456 57.895 9.46 0.00 38.24 3.02
96 97 1.006102 CTATACCGGAGCCGCCTTG 60.006 63.158 9.46 0.00 38.24 3.61
97 98 2.207924 CCTATACCGGAGCCGCCTT 61.208 63.158 9.46 0.00 38.24 4.35
98 99 2.600769 CCTATACCGGAGCCGCCT 60.601 66.667 9.46 0.00 38.24 5.52
99 100 2.599578 TCCTATACCGGAGCCGCC 60.600 66.667 9.46 0.00 38.24 6.13
100 101 2.963371 CTCCTATACCGGAGCCGC 59.037 66.667 9.46 0.00 43.69 6.53
105 106 1.149854 TCGCTGCTCCTATACCGGA 59.850 57.895 9.46 0.00 0.00 5.14
106 107 1.173444 AGTCGCTGCTCCTATACCGG 61.173 60.000 0.00 0.00 0.00 5.28
107 108 0.039978 CAGTCGCTGCTCCTATACCG 60.040 60.000 0.00 0.00 0.00 4.02
108 109 3.875838 CAGTCGCTGCTCCTATACC 57.124 57.895 0.00 0.00 0.00 2.73
132 133 3.257561 CAGAACGAGCCGCCGATG 61.258 66.667 8.04 1.59 0.00 3.84
133 134 2.501223 TTTCAGAACGAGCCGCCGAT 62.501 55.000 8.04 0.00 0.00 4.18
134 135 3.215597 TTTCAGAACGAGCCGCCGA 62.216 57.895 8.04 0.00 0.00 5.54
135 136 2.730672 CTTTCAGAACGAGCCGCCG 61.731 63.158 0.00 0.44 0.00 6.46
136 137 3.028366 GCTTTCAGAACGAGCCGCC 62.028 63.158 0.00 0.00 0.00 6.13
137 138 2.476499 GCTTTCAGAACGAGCCGC 59.524 61.111 0.00 0.00 0.00 6.53
138 139 2.730672 CCGCTTTCAGAACGAGCCG 61.731 63.158 1.88 0.00 32.90 5.52
139 140 0.389426 TACCGCTTTCAGAACGAGCC 60.389 55.000 1.88 0.00 32.90 4.70
140 141 0.992802 CTACCGCTTTCAGAACGAGC 59.007 55.000 0.00 0.00 0.00 5.03
141 142 1.986378 CACTACCGCTTTCAGAACGAG 59.014 52.381 0.00 0.00 0.00 4.18
142 143 1.336517 CCACTACCGCTTTCAGAACGA 60.337 52.381 0.00 0.00 0.00 3.85
143 144 1.068474 CCACTACCGCTTTCAGAACG 58.932 55.000 0.00 0.00 0.00 3.95
144 145 2.067013 GACCACTACCGCTTTCAGAAC 58.933 52.381 0.00 0.00 0.00 3.01
145 146 1.336517 CGACCACTACCGCTTTCAGAA 60.337 52.381 0.00 0.00 0.00 3.02
146 147 0.242825 CGACCACTACCGCTTTCAGA 59.757 55.000 0.00 0.00 0.00 3.27
147 148 0.038526 ACGACCACTACCGCTTTCAG 60.039 55.000 0.00 0.00 0.00 3.02
148 149 0.390124 AACGACCACTACCGCTTTCA 59.610 50.000 0.00 0.00 0.00 2.69
149 150 1.066136 GAACGACCACTACCGCTTTC 58.934 55.000 0.00 0.00 0.00 2.62
150 151 0.665369 CGAACGACCACTACCGCTTT 60.665 55.000 0.00 0.00 0.00 3.51
151 152 1.080974 CGAACGACCACTACCGCTT 60.081 57.895 0.00 0.00 0.00 4.68
152 153 2.564975 CGAACGACCACTACCGCT 59.435 61.111 0.00 0.00 0.00 5.52
153 154 2.505557 CCGAACGACCACTACCGC 60.506 66.667 0.00 0.00 0.00 5.68
154 155 1.443194 CACCGAACGACCACTACCG 60.443 63.158 0.00 0.00 0.00 4.02
155 156 1.080298 CCACCGAACGACCACTACC 60.080 63.158 0.00 0.00 0.00 3.18
156 157 0.387750 GACCACCGAACGACCACTAC 60.388 60.000 0.00 0.00 0.00 2.73
157 158 0.538057 AGACCACCGAACGACCACTA 60.538 55.000 0.00 0.00 0.00 2.74
158 159 1.803366 GAGACCACCGAACGACCACT 61.803 60.000 0.00 0.00 0.00 4.00
159 160 1.372623 GAGACCACCGAACGACCAC 60.373 63.158 0.00 0.00 0.00 4.16
160 161 1.802337 CTGAGACCACCGAACGACCA 61.802 60.000 0.00 0.00 0.00 4.02
161 162 1.080705 CTGAGACCACCGAACGACC 60.081 63.158 0.00 0.00 0.00 4.79
162 163 0.313043 TTCTGAGACCACCGAACGAC 59.687 55.000 0.00 0.00 0.00 4.34
163 164 1.201647 GATTCTGAGACCACCGAACGA 59.798 52.381 0.00 0.00 0.00 3.85
164 165 1.202582 AGATTCTGAGACCACCGAACG 59.797 52.381 0.00 0.00 0.00 3.95
165 166 2.231478 TGAGATTCTGAGACCACCGAAC 59.769 50.000 0.00 0.00 0.00 3.95
166 167 2.525368 TGAGATTCTGAGACCACCGAA 58.475 47.619 0.00 0.00 0.00 4.30
167 168 2.215942 TGAGATTCTGAGACCACCGA 57.784 50.000 0.00 0.00 0.00 4.69
168 169 3.193263 CATTGAGATTCTGAGACCACCG 58.807 50.000 0.00 0.00 0.00 4.94
169 170 4.213564 ACATTGAGATTCTGAGACCACC 57.786 45.455 0.00 0.00 0.00 4.61
170 171 6.402222 ACTTACATTGAGATTCTGAGACCAC 58.598 40.000 0.00 0.00 0.00 4.16
171 172 6.611613 ACTTACATTGAGATTCTGAGACCA 57.388 37.500 0.00 0.00 0.00 4.02
172 173 7.913674 AAACTTACATTGAGATTCTGAGACC 57.086 36.000 0.00 0.00 0.00 3.85
188 189 9.685828 GCACCTCAAACATAATAAAAACTTACA 57.314 29.630 0.00 0.00 0.00 2.41
189 190 9.908152 AGCACCTCAAACATAATAAAAACTTAC 57.092 29.630 0.00 0.00 0.00 2.34
193 194 9.855021 ACATAGCACCTCAAACATAATAAAAAC 57.145 29.630 0.00 0.00 0.00 2.43
196 197 9.461312 AGAACATAGCACCTCAAACATAATAAA 57.539 29.630 0.00 0.00 0.00 1.40
197 198 9.461312 AAGAACATAGCACCTCAAACATAATAA 57.539 29.630 0.00 0.00 0.00 1.40
198 199 9.461312 AAAGAACATAGCACCTCAAACATAATA 57.539 29.630 0.00 0.00 0.00 0.98
199 200 7.944729 AAGAACATAGCACCTCAAACATAAT 57.055 32.000 0.00 0.00 0.00 1.28
200 201 7.446931 TGAAAGAACATAGCACCTCAAACATAA 59.553 33.333 0.00 0.00 0.00 1.90
201 202 6.939730 TGAAAGAACATAGCACCTCAAACATA 59.060 34.615 0.00 0.00 0.00 2.29
202 203 5.769662 TGAAAGAACATAGCACCTCAAACAT 59.230 36.000 0.00 0.00 0.00 2.71
203 204 5.129634 TGAAAGAACATAGCACCTCAAACA 58.870 37.500 0.00 0.00 0.00 2.83
204 205 5.689383 TGAAAGAACATAGCACCTCAAAC 57.311 39.130 0.00 0.00 0.00 2.93
205 206 6.489700 TCATTGAAAGAACATAGCACCTCAAA 59.510 34.615 0.00 0.00 0.00 2.69
206 207 6.003326 TCATTGAAAGAACATAGCACCTCAA 58.997 36.000 0.00 0.00 0.00 3.02
207 208 5.559770 TCATTGAAAGAACATAGCACCTCA 58.440 37.500 0.00 0.00 0.00 3.86
208 209 6.150140 AGTTCATTGAAAGAACATAGCACCTC 59.850 38.462 14.64 0.00 45.93 3.85
209 210 6.006449 AGTTCATTGAAAGAACATAGCACCT 58.994 36.000 14.64 0.00 45.93 4.00
210 211 6.259550 AGTTCATTGAAAGAACATAGCACC 57.740 37.500 14.64 0.00 45.93 5.01
211 212 7.862372 TCAAAGTTCATTGAAAGAACATAGCAC 59.138 33.333 14.64 0.00 45.93 4.40
212 213 7.939782 TCAAAGTTCATTGAAAGAACATAGCA 58.060 30.769 14.64 0.00 45.93 3.49
213 214 8.976986 ATCAAAGTTCATTGAAAGAACATAGC 57.023 30.769 14.64 0.00 45.93 2.97
234 235 9.424319 GCGAAAATGATCTAGGTCTATTATCAA 57.576 33.333 4.28 0.00 30.90 2.57
235 236 8.585018 TGCGAAAATGATCTAGGTCTATTATCA 58.415 33.333 4.28 0.00 0.00 2.15
236 237 8.988064 TGCGAAAATGATCTAGGTCTATTATC 57.012 34.615 4.28 0.00 0.00 1.75
237 238 9.778741 TTTGCGAAAATGATCTAGGTCTATTAT 57.221 29.630 4.28 0.00 0.00 1.28
238 239 9.607988 TTTTGCGAAAATGATCTAGGTCTATTA 57.392 29.630 4.28 0.00 0.00 0.98
239 240 8.506168 TTTTGCGAAAATGATCTAGGTCTATT 57.494 30.769 4.28 0.14 0.00 1.73
240 241 8.506168 TTTTTGCGAAAATGATCTAGGTCTAT 57.494 30.769 7.81 0.00 30.07 1.98
241 242 7.915293 TTTTTGCGAAAATGATCTAGGTCTA 57.085 32.000 7.81 0.00 30.07 2.59
242 243 6.817765 TTTTTGCGAAAATGATCTAGGTCT 57.182 33.333 7.81 0.00 30.07 3.85
271 272 4.765339 GGTATTCCAGTGCCACTAGTTTTT 59.235 41.667 0.00 0.00 0.00 1.94
272 273 4.042934 AGGTATTCCAGTGCCACTAGTTTT 59.957 41.667 0.00 0.00 35.89 2.43
273 274 3.587506 AGGTATTCCAGTGCCACTAGTTT 59.412 43.478 0.00 0.00 35.89 2.66
274 275 3.182152 AGGTATTCCAGTGCCACTAGTT 58.818 45.455 0.00 0.00 35.89 2.24
275 276 2.834113 AGGTATTCCAGTGCCACTAGT 58.166 47.619 0.00 0.00 35.89 2.57
276 277 3.914426 AAGGTATTCCAGTGCCACTAG 57.086 47.619 0.00 0.00 35.89 2.57
277 278 4.650972 AAAAGGTATTCCAGTGCCACTA 57.349 40.909 0.00 0.00 35.89 2.74
278 279 3.525800 AAAAGGTATTCCAGTGCCACT 57.474 42.857 0.00 0.00 35.89 4.00
279 280 4.157840 CCTTAAAAGGTATTCCAGTGCCAC 59.842 45.833 0.24 0.00 41.41 5.01
280 281 4.043561 TCCTTAAAAGGTATTCCAGTGCCA 59.956 41.667 8.57 0.00 46.54 4.92
281 282 4.595986 TCCTTAAAAGGTATTCCAGTGCC 58.404 43.478 8.57 0.00 46.54 5.01
282 283 5.497474 TCTCCTTAAAAGGTATTCCAGTGC 58.503 41.667 8.57 0.00 46.54 4.40
283 284 7.996098 TTTCTCCTTAAAAGGTATTCCAGTG 57.004 36.000 8.57 0.00 46.54 3.66
284 285 7.450634 GGTTTTCTCCTTAAAAGGTATTCCAGT 59.549 37.037 8.57 0.00 46.54 4.00
285 286 7.093902 GGGTTTTCTCCTTAAAAGGTATTCCAG 60.094 40.741 8.57 0.00 46.54 3.86
286 287 6.722590 GGGTTTTCTCCTTAAAAGGTATTCCA 59.277 38.462 8.57 0.00 46.54 3.53
287 288 6.722590 TGGGTTTTCTCCTTAAAAGGTATTCC 59.277 38.462 8.57 5.61 46.54 3.01
288 289 7.770366 TGGGTTTTCTCCTTAAAAGGTATTC 57.230 36.000 8.57 0.00 46.54 1.75
289 290 8.555896 TTTGGGTTTTCTCCTTAAAAGGTATT 57.444 30.769 8.57 0.00 46.54 1.89
290 291 8.555896 TTTTGGGTTTTCTCCTTAAAAGGTAT 57.444 30.769 8.57 0.00 46.54 2.73
291 292 7.974730 TTTTGGGTTTTCTCCTTAAAAGGTA 57.025 32.000 8.57 0.00 46.54 3.08
292 293 6.877668 TTTTGGGTTTTCTCCTTAAAAGGT 57.122 33.333 8.57 0.00 46.54 3.50
293 294 6.710295 CCATTTTGGGTTTTCTCCTTAAAAGG 59.290 38.462 2.09 2.09 39.75 3.11
294 295 7.279615 ACCATTTTGGGTTTTCTCCTTAAAAG 58.720 34.615 0.00 0.00 43.37 2.27
295 296 7.201702 ACCATTTTGGGTTTTCTCCTTAAAA 57.798 32.000 0.00 0.00 43.37 1.52
296 297 6.816616 ACCATTTTGGGTTTTCTCCTTAAA 57.183 33.333 0.00 0.00 43.37 1.52
308 309 1.110518 AACGCGGAACCATTTTGGGT 61.111 50.000 12.47 0.00 42.68 4.51
309 310 0.665972 CAACGCGGAACCATTTTGGG 60.666 55.000 12.47 0.00 43.37 4.12
310 311 0.312416 TCAACGCGGAACCATTTTGG 59.688 50.000 12.47 0.00 45.02 3.28
311 312 1.685302 CTCAACGCGGAACCATTTTG 58.315 50.000 12.47 2.94 0.00 2.44
312 313 0.039527 GCTCAACGCGGAACCATTTT 60.040 50.000 12.47 0.00 0.00 1.82
313 314 0.889186 AGCTCAACGCGGAACCATTT 60.889 50.000 12.47 0.00 45.59 2.32
314 315 0.036765 TAGCTCAACGCGGAACCATT 60.037 50.000 12.47 0.00 45.59 3.16
338 339 3.119280 AGTTTTACAACACCAGGCACAAC 60.119 43.478 0.00 0.00 35.05 3.32
371 372 3.131709 TCAGAGAAGAAAGGGCAACAG 57.868 47.619 0.00 0.00 39.74 3.16
386 387 6.368243 ACAAGCATGCGAATCTATATTCAGAG 59.632 38.462 13.01 0.00 41.44 3.35
450 453 5.867174 CACTCCTACGTGTCATGAATGTAAA 59.133 40.000 0.00 0.00 0.00 2.01
462 465 2.453521 TCTATTGGCACTCCTACGTGT 58.546 47.619 0.00 0.00 37.24 4.49
471 474 1.620819 CCGGCTAGATCTATTGGCACT 59.379 52.381 12.88 0.00 0.00 4.40
496 499 2.137528 TGGCAGTGGTCTCGTGGAA 61.138 57.895 0.00 0.00 0.00 3.53
502 505 1.373570 GCTTATGTGGCAGTGGTCTC 58.626 55.000 0.00 0.00 0.00 3.36
557 560 3.127533 GGTGGTCGCTGGCATGAC 61.128 66.667 10.58 10.58 0.00 3.06
563 566 3.019003 AATCGGAGGTGGTCGCTGG 62.019 63.158 0.00 0.00 0.00 4.85
568 571 0.541863 ATGGTCAATCGGAGGTGGTC 59.458 55.000 0.00 0.00 0.00 4.02
579 582 5.163478 GCTTTGCCTATCTTTCATGGTCAAT 60.163 40.000 0.00 0.00 0.00 2.57
582 585 3.696051 TGCTTTGCCTATCTTTCATGGTC 59.304 43.478 0.00 0.00 0.00 4.02
587 590 2.493278 GCCTTGCTTTGCCTATCTTTCA 59.507 45.455 0.00 0.00 0.00 2.69
860 863 0.251209 AGGAGGGAAAAAGAACCGCC 60.251 55.000 0.00 0.00 43.63 6.13
971 974 2.601666 TGGCTGCCGTCTCTGACT 60.602 61.111 14.98 0.00 0.00 3.41
1164 1178 3.755628 GAGGTGCTACCGTCGCCA 61.756 66.667 0.00 0.00 44.90 5.69
1268 1286 4.442073 CCAACGATCAAAACTCAAAGCAAG 59.558 41.667 0.00 0.00 0.00 4.01
1271 1289 3.243401 ACCCAACGATCAAAACTCAAAGC 60.243 43.478 0.00 0.00 0.00 3.51
1272 1290 4.568152 ACCCAACGATCAAAACTCAAAG 57.432 40.909 0.00 0.00 0.00 2.77
1356 1377 2.279517 CTGCCATACTCGTCGGCC 60.280 66.667 0.00 0.00 45.63 6.13
1426 1447 6.070424 AGGTAGGAAGGAAAATGAATCGTGTA 60.070 38.462 0.00 0.00 0.00 2.90
1440 1461 2.617840 AGGAACGAAGGTAGGAAGGA 57.382 50.000 0.00 0.00 0.00 3.36
1441 1462 4.813750 TTTAGGAACGAAGGTAGGAAGG 57.186 45.455 0.00 0.00 0.00 3.46
1448 1469 9.418839 AGACTTATAGTATTTAGGAACGAAGGT 57.581 33.333 0.00 0.00 0.00 3.50
1451 1472 9.941664 CGAAGACTTATAGTATTTAGGAACGAA 57.058 33.333 0.00 0.00 28.55 3.85
1452 1473 9.113838 ACGAAGACTTATAGTATTTAGGAACGA 57.886 33.333 0.00 0.00 28.55 3.85
1468 1489 9.582431 CCATAGTGAAATTTCTACGAAGACTTA 57.418 33.333 18.64 3.86 0.00 2.24
1469 1490 8.311836 TCCATAGTGAAATTTCTACGAAGACTT 58.688 33.333 18.64 0.00 0.00 3.01
1470 1491 7.760340 GTCCATAGTGAAATTTCTACGAAGACT 59.240 37.037 18.64 13.41 0.00 3.24
1471 1492 7.010275 GGTCCATAGTGAAATTTCTACGAAGAC 59.990 40.741 18.64 16.35 0.00 3.01
1472 1493 7.039882 GGTCCATAGTGAAATTTCTACGAAGA 58.960 38.462 18.64 6.99 0.00 2.87
1473 1494 6.816640 TGGTCCATAGTGAAATTTCTACGAAG 59.183 38.462 18.64 8.71 0.00 3.79
1474 1495 6.592607 GTGGTCCATAGTGAAATTTCTACGAA 59.407 38.462 18.64 9.48 0.00 3.85
1475 1496 6.103997 GTGGTCCATAGTGAAATTTCTACGA 58.896 40.000 18.64 11.52 0.00 3.43
1476 1497 5.872617 TGTGGTCCATAGTGAAATTTCTACG 59.127 40.000 18.64 3.77 0.00 3.51
1477 1498 7.865706 ATGTGGTCCATAGTGAAATTTCTAC 57.134 36.000 18.64 14.20 29.82 2.59
1478 1499 7.709182 CGTATGTGGTCCATAGTGAAATTTCTA 59.291 37.037 18.64 4.82 36.71 2.10
1479 1500 6.538742 CGTATGTGGTCCATAGTGAAATTTCT 59.461 38.462 18.64 2.61 36.71 2.52
1480 1501 6.537301 TCGTATGTGGTCCATAGTGAAATTTC 59.463 38.462 11.41 11.41 36.71 2.17
1481 1502 6.411376 TCGTATGTGGTCCATAGTGAAATTT 58.589 36.000 0.00 0.00 36.71 1.82
1482 1503 5.984725 TCGTATGTGGTCCATAGTGAAATT 58.015 37.500 0.00 0.00 36.71 1.82
1483 1504 5.607939 TCGTATGTGGTCCATAGTGAAAT 57.392 39.130 0.00 0.00 36.71 2.17
1484 1505 5.408880 TTCGTATGTGGTCCATAGTGAAA 57.591 39.130 0.00 0.00 36.71 2.69
1485 1506 5.105106 ACATTCGTATGTGGTCCATAGTGAA 60.105 40.000 6.89 0.00 43.29 3.18
1486 1507 4.404394 ACATTCGTATGTGGTCCATAGTGA 59.596 41.667 6.89 0.00 43.29 3.41
1487 1508 4.693283 ACATTCGTATGTGGTCCATAGTG 58.307 43.478 6.89 0.00 43.29 2.74
1488 1509 6.455647 CATACATTCGTATGTGGTCCATAGT 58.544 40.000 16.91 0.00 46.70 2.12
1489 1510 6.951256 CATACATTCGTATGTGGTCCATAG 57.049 41.667 16.91 0.00 46.70 2.23
1501 1522 9.974980 TCTAAAATGCATCTACATACATTCGTA 57.025 29.630 0.00 0.00 31.75 3.43
1502 1523 8.887036 TCTAAAATGCATCTACATACATTCGT 57.113 30.769 0.00 0.00 31.75 3.85
1503 1524 8.982685 ACTCTAAAATGCATCTACATACATTCG 58.017 33.333 0.00 0.00 31.75 3.34
1525 1546 9.282569 GGAGCAAAATGAATGAATCTATACTCT 57.717 33.333 0.00 0.00 0.00 3.24
1526 1547 8.226448 CGGAGCAAAATGAATGAATCTATACTC 58.774 37.037 0.00 0.00 0.00 2.59
1527 1548 7.716998 ACGGAGCAAAATGAATGAATCTATACT 59.283 33.333 0.00 0.00 0.00 2.12
1528 1549 7.865707 ACGGAGCAAAATGAATGAATCTATAC 58.134 34.615 0.00 0.00 0.00 1.47
1529 1550 9.725019 ATACGGAGCAAAATGAATGAATCTATA 57.275 29.630 0.00 0.00 0.00 1.31
1530 1551 6.949352 ACGGAGCAAAATGAATGAATCTAT 57.051 33.333 0.00 0.00 0.00 1.98
1531 1552 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
1532 1553 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
1533 1554 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
1534 1555 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
1535 1556 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
1536 1557 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
1537 1558 6.258727 AGACTACATACGGAGCAAAATGAATG 59.741 38.462 0.00 0.00 0.00 2.67
1538 1559 6.349300 AGACTACATACGGAGCAAAATGAAT 58.651 36.000 0.00 0.00 0.00 2.57
1539 1560 5.730550 AGACTACATACGGAGCAAAATGAA 58.269 37.500 0.00 0.00 0.00 2.57
1540 1561 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
1541 1562 8.082852 ACTATAGACTACATACGGAGCAAAATG 58.917 37.037 6.78 0.00 0.00 2.32
1542 1563 8.082852 CACTATAGACTACATACGGAGCAAAAT 58.917 37.037 6.78 0.00 0.00 1.82
1543 1564 7.283807 TCACTATAGACTACATACGGAGCAAAA 59.716 37.037 6.78 0.00 0.00 2.44
1544 1565 6.769341 TCACTATAGACTACATACGGAGCAAA 59.231 38.462 6.78 0.00 0.00 3.68
1545 1566 6.293698 TCACTATAGACTACATACGGAGCAA 58.706 40.000 6.78 0.00 0.00 3.91
1546 1567 5.861727 TCACTATAGACTACATACGGAGCA 58.138 41.667 6.78 0.00 0.00 4.26
1547 1568 6.798315 TTCACTATAGACTACATACGGAGC 57.202 41.667 6.78 0.00 0.00 4.70
1548 1569 9.221933 AGATTTCACTATAGACTACATACGGAG 57.778 37.037 6.78 0.00 0.00 4.63
1549 1570 9.217278 GAGATTTCACTATAGACTACATACGGA 57.783 37.037 6.78 0.00 0.00 4.69
1550 1571 9.221933 AGAGATTTCACTATAGACTACATACGG 57.778 37.037 6.78 0.00 0.00 4.02
1577 1598 9.379791 CCTCCGTTCTTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 39.65 2.83
1578 1599 8.827677 CCCTCCGTTCTTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 39.65 2.77
1579 1600 8.765517 TCCCTCCGTTCTTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 39.65 2.52
1580 1601 8.315220 TCCCTCCGTTCTTAAATATAAGTCTT 57.685 34.615 0.00 0.00 39.65 3.01
1581 1602 7.564292 ACTCCCTCCGTTCTTAAATATAAGTCT 59.436 37.037 0.00 0.00 39.65 3.24
1582 1603 7.724287 ACTCCCTCCGTTCTTAAATATAAGTC 58.276 38.462 0.00 0.00 39.65 3.01
1583 1604 7.672122 ACTCCCTCCGTTCTTAAATATAAGT 57.328 36.000 0.00 0.00 39.65 2.24
1588 1609 9.822185 GTAAAATACTCCCTCCGTTCTTAAATA 57.178 33.333 0.00 0.00 0.00 1.40
1589 1610 8.323567 TGTAAAATACTCCCTCCGTTCTTAAAT 58.676 33.333 0.00 0.00 0.00 1.40
1590 1611 7.678837 TGTAAAATACTCCCTCCGTTCTTAAA 58.321 34.615 0.00 0.00 0.00 1.52
1591 1612 7.243604 TGTAAAATACTCCCTCCGTTCTTAA 57.756 36.000 0.00 0.00 0.00 1.85
1592 1613 6.855763 TGTAAAATACTCCCTCCGTTCTTA 57.144 37.500 0.00 0.00 0.00 2.10
1593 1614 5.750352 TGTAAAATACTCCCTCCGTTCTT 57.250 39.130 0.00 0.00 0.00 2.52
1594 1615 5.482878 TCTTGTAAAATACTCCCTCCGTTCT 59.517 40.000 0.00 0.00 0.00 3.01
1595 1616 5.727434 TCTTGTAAAATACTCCCTCCGTTC 58.273 41.667 0.00 0.00 0.00 3.95
1596 1617 5.750352 TCTTGTAAAATACTCCCTCCGTT 57.250 39.130 0.00 0.00 0.00 4.44
1597 1618 5.952347 ATCTTGTAAAATACTCCCTCCGT 57.048 39.130 0.00 0.00 0.00 4.69
1598 1619 7.048512 AGAAATCTTGTAAAATACTCCCTCCG 58.951 38.462 0.00 0.00 0.00 4.63
1599 1620 9.327628 GTAGAAATCTTGTAAAATACTCCCTCC 57.672 37.037 0.00 0.00 0.00 4.30
1602 1623 9.327628 GGAGTAGAAATCTTGTAAAATACTCCC 57.672 37.037 14.37 1.13 46.44 4.30
1626 1647 7.765695 AGACTGATTGCTAATTCAAAAAGGA 57.234 32.000 0.00 0.00 0.00 3.36
1627 1648 8.822652 AAAGACTGATTGCTAATTCAAAAAGG 57.177 30.769 0.00 0.00 0.00 3.11
1628 1649 9.467258 TGAAAGACTGATTGCTAATTCAAAAAG 57.533 29.630 0.00 0.00 0.00 2.27
1629 1650 9.985730 ATGAAAGACTGATTGCTAATTCAAAAA 57.014 25.926 0.00 0.00 0.00 1.94
1635 1656 9.678260 AGAGTTATGAAAGACTGATTGCTAATT 57.322 29.630 0.00 0.00 0.00 1.40
1638 1659 7.065085 GCAAGAGTTATGAAAGACTGATTGCTA 59.935 37.037 12.25 0.00 39.58 3.49
1640 1661 6.026513 GCAAGAGTTATGAAAGACTGATTGC 58.973 40.000 0.00 0.00 37.69 3.56
1648 1669 7.173218 CCTGTAACAAGCAAGAGTTATGAAAGA 59.827 37.037 0.00 0.00 33.30 2.52
1660 1681 1.949525 AGCACACCTGTAACAAGCAAG 59.050 47.619 0.00 0.00 0.00 4.01
1670 1701 0.250209 CTCAGAGCAAGCACACCTGT 60.250 55.000 0.00 0.00 0.00 4.00
1711 1742 0.747852 TGCGTGTGACAAGGTAGACA 59.252 50.000 0.00 0.00 0.00 3.41
1732 1763 2.041701 TGGCCGATCATGAATGAGAGA 58.958 47.619 0.00 0.00 40.64 3.10
1756 1787 0.255890 ATGCGAGGCAGGTTATGGTT 59.744 50.000 0.00 0.00 43.65 3.67
1806 1837 1.701031 TTGGACTCTTGGCAACCGGA 61.701 55.000 9.46 0.00 0.00 5.14
1812 1843 3.149196 GTCAGATTTTGGACTCTTGGCA 58.851 45.455 0.00 0.00 0.00 4.92
1823 1854 6.218019 TGGCAGAGAAAAATGTCAGATTTTG 58.782 36.000 0.00 0.00 32.23 2.44
1846 1877 5.449999 GGTTCTACCAAATCCGCCTAATTTG 60.450 44.000 6.25 6.25 41.60 2.32
1847 1878 4.643334 GGTTCTACCAAATCCGCCTAATTT 59.357 41.667 0.00 0.00 38.42 1.82
2016 2050 0.599558 TGAAGCCAGCAAACAGATGC 59.400 50.000 0.00 0.00 46.78 3.91
2290 2324 7.106239 ACTGCACAGTAGAAAATAGTATTGCT 58.894 34.615 0.35 0.47 40.43 3.91
2322 2356 9.869757 GCAAATTACTCAACCATACCTTTAATT 57.130 29.630 0.00 0.00 0.00 1.40
2323 2357 9.255029 AGCAAATTACTCAACCATACCTTTAAT 57.745 29.630 0.00 0.00 0.00 1.40
2437 2471 9.750125 GGTCAGAAAAATGTATCAGAAGTTTTT 57.250 29.630 0.00 0.00 35.42 1.94
2438 2472 9.136323 AGGTCAGAAAAATGTATCAGAAGTTTT 57.864 29.630 0.00 0.00 0.00 2.43
2439 2473 8.697507 AGGTCAGAAAAATGTATCAGAAGTTT 57.302 30.769 0.00 0.00 0.00 2.66
2440 2474 8.697507 AAGGTCAGAAAAATGTATCAGAAGTT 57.302 30.769 0.00 0.00 0.00 2.66
2441 2475 9.220767 GTAAGGTCAGAAAAATGTATCAGAAGT 57.779 33.333 0.00 0.00 0.00 3.01
2442 2476 8.669243 GGTAAGGTCAGAAAAATGTATCAGAAG 58.331 37.037 0.00 0.00 0.00 2.85
2443 2477 8.383175 AGGTAAGGTCAGAAAAATGTATCAGAA 58.617 33.333 0.00 0.00 0.00 3.02
2444 2478 7.918076 AGGTAAGGTCAGAAAAATGTATCAGA 58.082 34.615 0.00 0.00 0.00 3.27
2445 2479 9.667107 TTAGGTAAGGTCAGAAAAATGTATCAG 57.333 33.333 0.00 0.00 0.00 2.90
2448 2482 9.975218 ACATTAGGTAAGGTCAGAAAAATGTAT 57.025 29.630 0.00 0.00 34.31 2.29
2449 2483 9.802039 AACATTAGGTAAGGTCAGAAAAATGTA 57.198 29.630 0.00 0.00 34.81 2.29
2450 2484 8.576442 CAACATTAGGTAAGGTCAGAAAAATGT 58.424 33.333 0.00 0.00 36.79 2.71
2451 2485 8.792633 TCAACATTAGGTAAGGTCAGAAAAATG 58.207 33.333 0.00 0.00 29.02 2.32
2452 2486 8.934023 TCAACATTAGGTAAGGTCAGAAAAAT 57.066 30.769 0.00 0.00 29.02 1.82
2453 2487 8.792633 CATCAACATTAGGTAAGGTCAGAAAAA 58.207 33.333 0.00 0.00 29.02 1.94
2600 2634 2.696187 GGCCTAAGTTTTTGGAACACCA 59.304 45.455 0.00 0.00 39.29 4.17
2609 2643 5.833131 TGAAGATGAACTGGCCTAAGTTTTT 59.167 36.000 9.67 1.47 40.48 1.94
2643 2677 2.939103 CCAGCTTCAGGTAATACTGCAC 59.061 50.000 0.00 0.00 38.36 4.57
2752 2786 9.056005 TGTCTCGACTTTGTACTAACTTTAGTA 57.944 33.333 4.98 4.98 43.36 1.82
2753 2787 7.859875 GTGTCTCGACTTTGTACTAACTTTAGT 59.140 37.037 6.85 6.85 45.39 2.24
2754 2788 8.074972 AGTGTCTCGACTTTGTACTAACTTTAG 58.925 37.037 0.00 0.00 36.82 1.85
2755 2789 7.934457 AGTGTCTCGACTTTGTACTAACTTTA 58.066 34.615 0.00 0.00 0.00 1.85
2756 2790 6.803642 AGTGTCTCGACTTTGTACTAACTTT 58.196 36.000 0.00 0.00 0.00 2.66
2757 2791 6.388435 AGTGTCTCGACTTTGTACTAACTT 57.612 37.500 0.00 0.00 0.00 2.66
2758 2792 6.388435 AAGTGTCTCGACTTTGTACTAACT 57.612 37.500 0.00 0.00 31.92 2.24
2759 2793 8.739649 AATAAGTGTCTCGACTTTGTACTAAC 57.260 34.615 0.00 0.00 37.38 2.34
2760 2794 9.754382 AAAATAAGTGTCTCGACTTTGTACTAA 57.246 29.630 0.00 0.00 37.38 2.24
2761 2795 9.188588 CAAAATAAGTGTCTCGACTTTGTACTA 57.811 33.333 0.00 0.00 37.38 1.82
2762 2796 7.170998 CCAAAATAAGTGTCTCGACTTTGTACT 59.829 37.037 0.00 0.00 37.38 2.73
2763 2797 7.288672 CCAAAATAAGTGTCTCGACTTTGTAC 58.711 38.462 0.00 0.00 37.38 2.90
2764 2798 6.425721 CCCAAAATAAGTGTCTCGACTTTGTA 59.574 38.462 0.00 0.00 37.38 2.41
2765 2799 5.238650 CCCAAAATAAGTGTCTCGACTTTGT 59.761 40.000 0.00 0.00 37.38 2.83
2766 2800 5.468746 TCCCAAAATAAGTGTCTCGACTTTG 59.531 40.000 0.00 0.61 37.38 2.77
2767 2801 5.469084 GTCCCAAAATAAGTGTCTCGACTTT 59.531 40.000 0.00 0.00 37.38 2.66
2768 2802 4.995487 GTCCCAAAATAAGTGTCTCGACTT 59.005 41.667 0.00 0.00 39.54 3.01
2769 2803 4.566987 GTCCCAAAATAAGTGTCTCGACT 58.433 43.478 0.00 0.00 0.00 4.18
2770 2804 3.367025 CGTCCCAAAATAAGTGTCTCGAC 59.633 47.826 0.00 0.00 0.00 4.20
2771 2805 3.581755 CGTCCCAAAATAAGTGTCTCGA 58.418 45.455 0.00 0.00 0.00 4.04
2772 2806 2.671396 CCGTCCCAAAATAAGTGTCTCG 59.329 50.000 0.00 0.00 0.00 4.04
2773 2807 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2774 2808 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2775 2809 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2776 2810 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2777 2811 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2778 2812 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2779 2813 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2780 2814 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2781 2815 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2782 2816 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2783 2817 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2784 2818 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2785 2819 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
2786 2820 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
2787 2821 2.030371 CTAAAGTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
2788 2822 3.010200 TCTAAAGTACTCCCTCCGTCC 57.990 52.381 0.00 0.00 0.00 4.79
2789 2823 4.643784 TGATTCTAAAGTACTCCCTCCGTC 59.356 45.833 0.00 0.00 0.00 4.79
2790 2824 4.401837 GTGATTCTAAAGTACTCCCTCCGT 59.598 45.833 0.00 0.00 0.00 4.69
2791 2825 4.401519 TGTGATTCTAAAGTACTCCCTCCG 59.598 45.833 0.00 0.00 0.00 4.63
2792 2826 5.934402 TGTGATTCTAAAGTACTCCCTCC 57.066 43.478 0.00 0.00 0.00 4.30
2793 2827 6.070710 ACCTTGTGATTCTAAAGTACTCCCTC 60.071 42.308 0.00 0.00 0.00 4.30
2794 2828 5.785940 ACCTTGTGATTCTAAAGTACTCCCT 59.214 40.000 0.00 0.00 0.00 4.20
2795 2829 5.875359 CACCTTGTGATTCTAAAGTACTCCC 59.125 44.000 0.00 0.00 35.23 4.30
2796 2830 6.465084 ACACCTTGTGATTCTAAAGTACTCC 58.535 40.000 0.00 0.00 36.96 3.85
2823 2857 1.981256 ATGGGATAATGCACCGGAAC 58.019 50.000 9.46 0.00 0.00 3.62
2836 2870 4.603131 ACTGCAACTGTTATCAATGGGAT 58.397 39.130 0.00 0.00 40.14 3.85
2851 2887 8.850454 TTGAGAAAATTACTACAAACTGCAAC 57.150 30.769 0.00 0.00 0.00 4.17
2872 2909 6.478344 GGAGTATCAGTATCTGCAGTTTTGAG 59.522 42.308 14.67 1.18 36.25 3.02
2875 2912 5.189736 TGGGAGTATCAGTATCTGCAGTTTT 59.810 40.000 14.67 2.71 36.25 2.43
2901 2938 1.601162 CGCCAATTGCATGGATAGCAC 60.601 52.381 10.63 0.00 43.54 4.40
2956 2993 9.325198 CTTGGTATAATACTCACATAAGCAACA 57.675 33.333 0.00 0.00 0.00 3.33
2990 3028 4.692155 CACCGCAGCTGATGATATTAATGA 59.308 41.667 20.43 0.00 0.00 2.57
3002 3040 1.443828 TGTGTAACACCGCAGCTGA 59.556 52.632 20.43 0.00 45.67 4.26
3019 3057 8.574196 AGTTTTCAGAATCCGTTGTTAAATTG 57.426 30.769 0.00 0.00 0.00 2.32
3030 3068 7.857885 GCCTGAATAAATAGTTTTCAGAATCCG 59.142 37.037 19.86 10.27 45.88 4.18
3491 3530 2.613691 GCTGTGCAGAAATGATTTGGG 58.386 47.619 3.02 0.00 0.00 4.12
3642 3682 1.691196 CCAAGGTTCTTTGGCAGACA 58.309 50.000 1.00 0.00 41.02 3.41
4101 4141 1.379044 CTCACCCCTGGCCATTCAC 60.379 63.158 5.51 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.