Multiple sequence alignment - TraesCS5B01G127800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G127800 chr5B 100.000 4921 0 0 1 4921 233233032 233237952 0.000000e+00 9088.0
1 TraesCS5B01G127800 chr5A 94.233 1474 64 12 2414 3876 290073603 290075066 0.000000e+00 2231.0
2 TraesCS5B01G127800 chr5A 88.304 1120 65 27 224 1327 290069853 290070922 0.000000e+00 1282.0
3 TraesCS5B01G127800 chr5A 78.352 522 89 18 2871 3377 289856453 289855941 2.860000e-82 316.0
4 TraesCS5B01G127800 chr5A 84.127 189 28 2 2044 2232 703476131 703475945 1.090000e-41 182.0
5 TraesCS5B01G127800 chr5A 91.549 71 6 0 1961 2031 290073223 290073293 1.130000e-16 99.0
6 TraesCS5B01G127800 chr5D 92.652 1497 68 23 2419 3879 217333079 217334569 0.000000e+00 2117.0
7 TraesCS5B01G127800 chr5D 89.199 1324 53 38 169 1473 217330044 217331296 0.000000e+00 1570.0
8 TraesCS5B01G127800 chr5D 77.397 584 116 11 2871 3443 217297237 217296659 2.840000e-87 333.0
9 TraesCS5B01G127800 chr5D 87.745 204 11 5 1656 1846 217331304 217331506 4.960000e-55 226.0
10 TraesCS5B01G127800 chr5D 81.333 225 23 8 2044 2249 481641822 481641598 1.100000e-36 165.0
11 TraesCS5B01G127800 chr5D 80.269 223 26 8 2045 2249 498184702 498184924 8.530000e-33 152.0
12 TraesCS5B01G127800 chr5D 93.182 44 3 0 1883 1926 217331550 217331593 1.140000e-06 65.8
13 TraesCS5B01G127800 chr2D 88.669 1412 113 30 2505 3879 600408109 600406708 0.000000e+00 1677.0
14 TraesCS5B01G127800 chr2D 79.837 1225 130 56 352 1560 600412026 600410903 0.000000e+00 785.0
15 TraesCS5B01G127800 chr2D 79.387 587 109 9 2871 3448 373759920 373759337 2.130000e-108 403.0
16 TraesCS5B01G127800 chr2D 84.332 217 24 2 2033 2249 648089268 648089062 2.320000e-48 204.0
17 TraesCS5B01G127800 chr2B 87.629 1455 118 43 2475 3879 730615050 730613608 0.000000e+00 1633.0
18 TraesCS5B01G127800 chr2B 79.630 1134 110 53 301 1417 730618731 730617702 0.000000e+00 702.0
19 TraesCS5B01G127800 chr2B 91.244 434 30 7 3880 4308 773866933 773867363 7.100000e-163 584.0
20 TraesCS5B01G127800 chr2B 88.626 211 19 5 2044 2253 732580894 732580688 8.180000e-63 252.0
21 TraesCS5B01G127800 chr2B 81.250 224 23 8 2044 2250 109211036 109211257 3.940000e-36 163.0
22 TraesCS5B01G127800 chr2B 90.909 44 4 0 1733 1776 730617347 730617390 5.320000e-05 60.2
23 TraesCS5B01G127800 chr2A 88.611 1361 109 25 2557 3879 734092051 734090699 0.000000e+00 1613.0
24 TraesCS5B01G127800 chr2A 87.755 637 49 15 3879 4513 2889885 2890494 0.000000e+00 717.0
25 TraesCS5B01G127800 chr2A 79.212 1015 114 49 365 1370 734095079 734094153 2.520000e-172 616.0
26 TraesCS5B01G127800 chr2A 91.375 429 34 2 3880 4307 232373271 232373697 7.100000e-163 584.0
27 TraesCS5B01G127800 chr2A 94.167 120 6 1 4803 4921 714533061 714532942 1.090000e-41 182.0
28 TraesCS5B01G127800 chr6B 86.860 1035 89 16 3880 4907 22266512 22267506 0.000000e+00 1114.0
29 TraesCS5B01G127800 chr6B 91.667 432 29 6 3880 4308 715858020 715857593 4.240000e-165 592.0
30 TraesCS5B01G127800 chr6B 93.496 123 5 2 4799 4921 699661803 699661684 3.910000e-41 180.0
31 TraesCS5B01G127800 chr7A 86.297 883 73 29 2767 3612 728290415 728291286 0.000000e+00 917.0
32 TraesCS5B01G127800 chr3D 88.496 565 52 11 3880 4437 120620103 120619545 0.000000e+00 671.0
33 TraesCS5B01G127800 chr1D 93.366 407 25 2 3880 4284 201772303 201772709 7.050000e-168 601.0
34 TraesCS5B01G127800 chr1A 93.382 408 24 3 3880 4285 564337858 564338264 7.050000e-168 601.0
35 TraesCS5B01G127800 chr1A 85.492 193 26 2 2044 2235 64410283 64410474 3.000000e-47 200.0
36 TraesCS5B01G127800 chr1B 85.968 563 58 15 3879 4437 4077844 4078389 2.550000e-162 582.0
37 TraesCS5B01G127800 chr1B 96.743 307 9 1 4616 4921 549906028 549905722 1.220000e-140 510.0
38 TraesCS5B01G127800 chr1B 93.617 235 15 0 4393 4627 549925228 549924994 7.840000e-93 351.0
39 TraesCS5B01G127800 chr1B 83.924 367 33 10 3498 3839 680809958 680810323 1.320000e-85 327.0
40 TraesCS5B01G127800 chr7B 92.402 408 29 2 3873 4279 677206095 677206501 9.180000e-162 580.0
41 TraesCS5B01G127800 chr7B 84.588 558 73 9 3879 4428 733475917 733475365 4.330000e-150 542.0
42 TraesCS5B01G127800 chrUn 89.560 182 17 2 2044 2225 94974811 94974632 3.830000e-56 230.0
43 TraesCS5B01G127800 chrUn 85.799 169 19 4 2042 2208 362086174 362086009 1.820000e-39 174.0
44 TraesCS5B01G127800 chr7D 90.968 155 12 1 2044 2196 593396384 593396538 1.800000e-49 207.0
45 TraesCS5B01G127800 chr7D 87.500 48 2 3 613 660 552946811 552946854 9.000000e-03 52.8
46 TraesCS5B01G127800 chr4D 84.466 206 32 0 2044 2249 479369495 479369700 2.320000e-48 204.0
47 TraesCS5B01G127800 chr4A 87.179 156 17 2 2042 2196 49193547 49193700 1.820000e-39 174.0
48 TraesCS5B01G127800 chr4B 78.007 291 43 12 1405 1690 642400120 642400394 3.940000e-36 163.0
49 TraesCS5B01G127800 chr6A 79.275 193 20 5 2076 2249 446783318 446783509 3.110000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G127800 chr5B 233233032 233237952 4920 False 9088.0 9088 100.0000 1 4921 1 chr5B.!!$F1 4920
1 TraesCS5B01G127800 chr5A 290069853 290075066 5213 False 1204.0 2231 91.3620 224 3876 3 chr5A.!!$F1 3652
2 TraesCS5B01G127800 chr5A 289855941 289856453 512 True 316.0 316 78.3520 2871 3377 1 chr5A.!!$R1 506
3 TraesCS5B01G127800 chr5D 217330044 217334569 4525 False 994.7 2117 90.6945 169 3879 4 chr5D.!!$F2 3710
4 TraesCS5B01G127800 chr5D 217296659 217297237 578 True 333.0 333 77.3970 2871 3443 1 chr5D.!!$R1 572
5 TraesCS5B01G127800 chr2D 600406708 600412026 5318 True 1231.0 1677 84.2530 352 3879 2 chr2D.!!$R3 3527
6 TraesCS5B01G127800 chr2D 373759337 373759920 583 True 403.0 403 79.3870 2871 3448 1 chr2D.!!$R1 577
7 TraesCS5B01G127800 chr2B 730613608 730618731 5123 True 1167.5 1633 83.6295 301 3879 2 chr2B.!!$R2 3578
8 TraesCS5B01G127800 chr2A 734090699 734095079 4380 True 1114.5 1613 83.9115 365 3879 2 chr2A.!!$R2 3514
9 TraesCS5B01G127800 chr2A 2889885 2890494 609 False 717.0 717 87.7550 3879 4513 1 chr2A.!!$F1 634
10 TraesCS5B01G127800 chr6B 22266512 22267506 994 False 1114.0 1114 86.8600 3880 4907 1 chr6B.!!$F1 1027
11 TraesCS5B01G127800 chr7A 728290415 728291286 871 False 917.0 917 86.2970 2767 3612 1 chr7A.!!$F1 845
12 TraesCS5B01G127800 chr3D 120619545 120620103 558 True 671.0 671 88.4960 3880 4437 1 chr3D.!!$R1 557
13 TraesCS5B01G127800 chr1B 4077844 4078389 545 False 582.0 582 85.9680 3879 4437 1 chr1B.!!$F1 558
14 TraesCS5B01G127800 chr7B 733475365 733475917 552 True 542.0 542 84.5880 3879 4428 1 chr7B.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.039074 GGCGGAGATCCATACTCACG 60.039 60.000 0.00 0.00 36.26 4.35 F
118 119 0.039617 CTTTGCATCCGGTTTGCGAA 60.040 50.000 24.01 24.01 43.10 4.70 F
489 510 0.329261 TCAGCTCCCATCCAAACAGG 59.671 55.000 0.00 0.00 39.47 4.00 F
617 662 0.938926 ATCTCCTCCCTTCCTCCCCT 60.939 60.000 0.00 0.00 0.00 4.79 F
761 830 1.153489 CGTGGCATCTCCTGTCAGG 60.153 63.158 13.21 13.21 40.99 3.86 F
820 893 1.202222 GCCACAACATATGCTCTGCAC 60.202 52.381 1.58 0.00 43.04 4.57 F
2369 7787 0.270699 ATGGGCCCTGTCCCTGTATA 59.729 55.000 25.70 0.00 46.67 1.47 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1965 6681 0.822164 GCAGCTGCTCCCAAATGATT 59.178 50.000 31.33 0.0 38.21 2.57 R
2054 7446 2.899303 ATTTCGGACCCCACTGAAAT 57.101 45.000 0.00 0.0 45.04 2.17 R
2336 7730 1.692519 GGCCCATACACCGATTACTCT 59.307 52.381 0.00 0.0 0.00 3.24 R
2355 7773 5.189145 ACAAGTTTACTATACAGGGACAGGG 59.811 44.000 0.00 0.0 0.00 4.45 R
2369 7787 6.150474 CGAATAAACCCATCCACAAGTTTACT 59.850 38.462 0.00 0.0 37.47 2.24 R
2487 8190 6.317893 ACAAAAGAACAGTAGAAACATCCGTT 59.682 34.615 0.00 0.0 36.73 4.44 R
4005 10507 0.611200 CATTGTGTGTCTACCCCCGA 59.389 55.000 0.00 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.234300 GGATGCAGCCAAATTCATGG 57.766 50.000 18.08 0.00 43.70 3.66
20 21 1.202604 GGATGCAGCCAAATTCATGGG 60.203 52.381 18.08 0.00 41.01 4.00
27 28 2.936202 GCCAAATTCATGGGCTCTAGA 58.064 47.619 2.95 0.00 44.32 2.43
28 29 3.494332 GCCAAATTCATGGGCTCTAGAT 58.506 45.455 2.95 0.00 44.32 1.98
29 30 3.255149 GCCAAATTCATGGGCTCTAGATG 59.745 47.826 2.95 0.00 44.32 2.90
30 31 4.722220 CCAAATTCATGGGCTCTAGATGA 58.278 43.478 0.00 0.00 36.79 2.92
31 32 4.760715 CCAAATTCATGGGCTCTAGATGAG 59.239 45.833 0.00 0.00 45.33 2.90
32 33 4.637387 AATTCATGGGCTCTAGATGAGG 57.363 45.455 0.00 0.00 42.87 3.86
33 34 2.783379 TCATGGGCTCTAGATGAGGT 57.217 50.000 0.00 0.00 42.87 3.85
34 35 3.051940 TCATGGGCTCTAGATGAGGTT 57.948 47.619 0.00 0.00 42.87 3.50
35 36 3.387962 TCATGGGCTCTAGATGAGGTTT 58.612 45.455 0.00 0.00 42.87 3.27
36 37 3.782523 TCATGGGCTCTAGATGAGGTTTT 59.217 43.478 0.00 0.00 42.87 2.43
37 38 3.634397 TGGGCTCTAGATGAGGTTTTG 57.366 47.619 0.00 0.00 42.87 2.44
38 39 2.239654 TGGGCTCTAGATGAGGTTTTGG 59.760 50.000 0.00 0.00 42.87 3.28
39 40 2.422093 GGGCTCTAGATGAGGTTTTGGG 60.422 54.545 0.00 0.00 42.87 4.12
40 41 2.505819 GGCTCTAGATGAGGTTTTGGGA 59.494 50.000 0.00 0.00 42.87 4.37
41 42 3.054361 GGCTCTAGATGAGGTTTTGGGAA 60.054 47.826 0.00 0.00 42.87 3.97
42 43 4.195416 GCTCTAGATGAGGTTTTGGGAAG 58.805 47.826 0.00 0.00 42.87 3.46
43 44 4.775236 CTCTAGATGAGGTTTTGGGAAGG 58.225 47.826 0.00 0.00 39.08 3.46
44 45 4.175962 TCTAGATGAGGTTTTGGGAAGGT 58.824 43.478 0.00 0.00 0.00 3.50
45 46 3.160679 AGATGAGGTTTTGGGAAGGTG 57.839 47.619 0.00 0.00 0.00 4.00
46 47 2.171003 GATGAGGTTTTGGGAAGGTGG 58.829 52.381 0.00 0.00 0.00 4.61
47 48 0.187361 TGAGGTTTTGGGAAGGTGGG 59.813 55.000 0.00 0.00 0.00 4.61
48 49 0.187606 GAGGTTTTGGGAAGGTGGGT 59.812 55.000 0.00 0.00 0.00 4.51
49 50 0.639943 AGGTTTTGGGAAGGTGGGTT 59.360 50.000 0.00 0.00 0.00 4.11
50 51 0.756294 GGTTTTGGGAAGGTGGGTTG 59.244 55.000 0.00 0.00 0.00 3.77
51 52 1.491668 GTTTTGGGAAGGTGGGTTGT 58.508 50.000 0.00 0.00 0.00 3.32
52 53 1.411246 GTTTTGGGAAGGTGGGTTGTC 59.589 52.381 0.00 0.00 0.00 3.18
53 54 0.466555 TTTGGGAAGGTGGGTTGTCG 60.467 55.000 0.00 0.00 0.00 4.35
54 55 2.033602 GGGAAGGTGGGTTGTCGG 59.966 66.667 0.00 0.00 0.00 4.79
55 56 2.522367 GGGAAGGTGGGTTGTCGGA 61.522 63.158 0.00 0.00 0.00 4.55
56 57 1.003718 GGAAGGTGGGTTGTCGGAG 60.004 63.158 0.00 0.00 0.00 4.63
57 58 1.752833 GAAGGTGGGTTGTCGGAGT 59.247 57.895 0.00 0.00 0.00 3.85
58 59 0.320508 GAAGGTGGGTTGTCGGAGTC 60.321 60.000 0.00 0.00 0.00 3.36
59 60 1.765597 AAGGTGGGTTGTCGGAGTCC 61.766 60.000 0.00 0.00 0.00 3.85
60 61 2.214920 GGTGGGTTGTCGGAGTCCT 61.215 63.158 7.77 0.00 0.00 3.85
61 62 0.901580 GGTGGGTTGTCGGAGTCCTA 60.902 60.000 7.77 0.00 0.00 2.94
62 63 0.245813 GTGGGTTGTCGGAGTCCTAC 59.754 60.000 7.77 7.30 0.00 3.18
63 64 0.178955 TGGGTTGTCGGAGTCCTACA 60.179 55.000 12.34 12.34 0.00 2.74
64 65 1.192428 GGGTTGTCGGAGTCCTACAT 58.808 55.000 16.65 0.00 0.00 2.29
65 66 1.134788 GGGTTGTCGGAGTCCTACATG 60.135 57.143 16.65 0.00 0.00 3.21
66 67 1.134788 GGTTGTCGGAGTCCTACATGG 60.135 57.143 16.65 0.00 37.10 3.66
67 68 0.535335 TTGTCGGAGTCCTACATGGC 59.465 55.000 16.65 0.00 35.26 4.40
68 69 1.065928 GTCGGAGTCCTACATGGCG 59.934 63.158 8.92 0.00 35.26 5.69
69 70 2.125326 TCGGAGTCCTACATGGCGG 61.125 63.158 7.77 0.00 35.26 6.13
70 71 2.125326 CGGAGTCCTACATGGCGGA 61.125 63.158 7.77 0.00 35.26 5.54
71 72 1.742768 GGAGTCCTACATGGCGGAG 59.257 63.158 0.41 0.00 35.26 4.63
72 73 0.755698 GGAGTCCTACATGGCGGAGA 60.756 60.000 0.41 0.00 35.26 3.71
73 74 1.333177 GAGTCCTACATGGCGGAGAT 58.667 55.000 5.57 0.00 35.26 2.75
74 75 1.271102 GAGTCCTACATGGCGGAGATC 59.729 57.143 5.57 4.35 35.26 2.75
75 76 0.318762 GTCCTACATGGCGGAGATCC 59.681 60.000 5.57 0.00 35.26 3.36
76 77 0.105709 TCCTACATGGCGGAGATCCA 60.106 55.000 0.00 0.00 38.09 3.41
77 78 0.979665 CCTACATGGCGGAGATCCAT 59.020 55.000 0.00 0.00 44.70 3.41
78 79 2.179427 CCTACATGGCGGAGATCCATA 58.821 52.381 0.00 0.00 42.11 2.74
79 80 2.093973 CCTACATGGCGGAGATCCATAC 60.094 54.545 0.00 0.00 42.11 2.39
80 81 1.722034 ACATGGCGGAGATCCATACT 58.278 50.000 0.00 0.00 42.11 2.12
81 82 1.620819 ACATGGCGGAGATCCATACTC 59.379 52.381 0.00 0.00 42.11 2.59
82 83 1.620323 CATGGCGGAGATCCATACTCA 59.380 52.381 0.00 0.00 42.11 3.41
83 84 1.040646 TGGCGGAGATCCATACTCAC 58.959 55.000 0.00 0.00 36.26 3.51
84 85 0.039074 GGCGGAGATCCATACTCACG 60.039 60.000 0.00 0.00 36.26 4.35
85 86 0.664767 GCGGAGATCCATACTCACGC 60.665 60.000 0.00 0.00 41.96 5.34
86 87 0.668535 CGGAGATCCATACTCACGCA 59.331 55.000 0.00 0.00 36.26 5.24
87 88 1.067060 CGGAGATCCATACTCACGCAA 59.933 52.381 0.00 0.00 36.26 4.85
88 89 2.481276 CGGAGATCCATACTCACGCAAA 60.481 50.000 0.00 0.00 36.26 3.68
89 90 2.866762 GGAGATCCATACTCACGCAAAC 59.133 50.000 0.00 0.00 36.26 2.93
90 91 2.866762 GAGATCCATACTCACGCAAACC 59.133 50.000 0.00 0.00 34.87 3.27
91 92 2.501723 AGATCCATACTCACGCAAACCT 59.498 45.455 0.00 0.00 0.00 3.50
92 93 2.380084 TCCATACTCACGCAAACCTC 57.620 50.000 0.00 0.00 0.00 3.85
93 94 1.899814 TCCATACTCACGCAAACCTCT 59.100 47.619 0.00 0.00 0.00 3.69
94 95 2.094182 TCCATACTCACGCAAACCTCTC 60.094 50.000 0.00 0.00 0.00 3.20
95 96 2.271800 CATACTCACGCAAACCTCTCC 58.728 52.381 0.00 0.00 0.00 3.71
96 97 1.629043 TACTCACGCAAACCTCTCCT 58.371 50.000 0.00 0.00 0.00 3.69
97 98 1.629043 ACTCACGCAAACCTCTCCTA 58.371 50.000 0.00 0.00 0.00 2.94
98 99 1.968493 ACTCACGCAAACCTCTCCTAA 59.032 47.619 0.00 0.00 0.00 2.69
99 100 2.288886 ACTCACGCAAACCTCTCCTAAC 60.289 50.000 0.00 0.00 0.00 2.34
100 101 1.968493 TCACGCAAACCTCTCCTAACT 59.032 47.619 0.00 0.00 0.00 2.24
101 102 2.367567 TCACGCAAACCTCTCCTAACTT 59.632 45.455 0.00 0.00 0.00 2.66
102 103 3.139077 CACGCAAACCTCTCCTAACTTT 58.861 45.455 0.00 0.00 0.00 2.66
103 104 3.058914 CACGCAAACCTCTCCTAACTTTG 60.059 47.826 0.00 0.00 0.00 2.77
104 105 2.095718 CGCAAACCTCTCCTAACTTTGC 60.096 50.000 0.00 0.00 42.07 3.68
105 106 2.884639 GCAAACCTCTCCTAACTTTGCA 59.115 45.455 8.21 0.00 43.96 4.08
106 107 3.507622 GCAAACCTCTCCTAACTTTGCAT 59.492 43.478 8.21 0.00 43.96 3.96
107 108 4.379918 GCAAACCTCTCCTAACTTTGCATC 60.380 45.833 8.21 0.00 43.96 3.91
108 109 3.636153 ACCTCTCCTAACTTTGCATCC 57.364 47.619 0.00 0.00 0.00 3.51
109 110 2.093447 ACCTCTCCTAACTTTGCATCCG 60.093 50.000 0.00 0.00 0.00 4.18
110 111 2.555199 CTCTCCTAACTTTGCATCCGG 58.445 52.381 0.00 0.00 0.00 5.14
111 112 1.906574 TCTCCTAACTTTGCATCCGGT 59.093 47.619 0.00 0.00 0.00 5.28
112 113 2.304761 TCTCCTAACTTTGCATCCGGTT 59.695 45.455 0.00 0.00 0.00 4.44
113 114 3.081804 CTCCTAACTTTGCATCCGGTTT 58.918 45.455 0.00 0.00 0.00 3.27
114 115 2.817258 TCCTAACTTTGCATCCGGTTTG 59.183 45.455 0.00 1.55 0.00 2.93
115 116 2.595386 CTAACTTTGCATCCGGTTTGC 58.405 47.619 20.55 20.55 40.55 3.68
116 117 0.318614 AACTTTGCATCCGGTTTGCG 60.319 50.000 21.42 13.02 43.10 4.85
117 118 1.169661 ACTTTGCATCCGGTTTGCGA 61.170 50.000 21.42 18.49 43.10 5.10
118 119 0.039617 CTTTGCATCCGGTTTGCGAA 60.040 50.000 24.01 24.01 43.10 4.70
119 120 0.385751 TTTGCATCCGGTTTGCGAAA 59.614 45.000 23.65 19.93 43.10 3.46
120 121 0.385751 TTGCATCCGGTTTGCGAAAA 59.614 45.000 21.42 11.50 43.10 2.29
121 122 0.600557 TGCATCCGGTTTGCGAAAAT 59.399 45.000 21.42 0.00 43.10 1.82
122 123 1.000283 TGCATCCGGTTTGCGAAAATT 60.000 42.857 21.42 0.00 43.10 1.82
123 124 1.653609 GCATCCGGTTTGCGAAAATTC 59.346 47.619 14.65 0.00 0.00 2.17
137 138 4.442705 CGAAAATTCGTACATATGGACGC 58.557 43.478 31.48 17.29 45.09 5.19
138 139 4.442705 GAAAATTCGTACATATGGACGCG 58.557 43.478 31.48 13.15 38.93 6.01
139 140 2.787601 ATTCGTACATATGGACGCGT 57.212 45.000 31.48 20.45 38.93 6.01
140 141 2.565210 TTCGTACATATGGACGCGTT 57.435 45.000 31.48 0.00 38.93 4.84
141 142 2.109609 TCGTACATATGGACGCGTTC 57.890 50.000 31.48 13.50 38.93 3.95
142 143 1.401199 TCGTACATATGGACGCGTTCA 59.599 47.619 31.48 24.85 38.93 3.18
143 144 2.159407 TCGTACATATGGACGCGTTCAA 60.159 45.455 31.48 14.30 38.93 2.69
144 145 2.215587 CGTACATATGGACGCGTTCAAG 59.784 50.000 26.51 19.20 31.49 3.02
145 146 2.665649 ACATATGGACGCGTTCAAGA 57.334 45.000 26.49 16.24 0.00 3.02
146 147 2.268298 ACATATGGACGCGTTCAAGAC 58.732 47.619 26.49 4.27 0.00 3.01
169 170 3.430862 CGGCACACGGTTGGATGG 61.431 66.667 0.00 0.00 39.42 3.51
170 171 3.747976 GGCACACGGTTGGATGGC 61.748 66.667 0.00 0.00 0.00 4.40
171 172 2.983030 GCACACGGTTGGATGGCA 60.983 61.111 0.00 0.00 0.00 4.92
265 270 1.131126 CATGAAGGTGCATCGGTTGAC 59.869 52.381 0.00 0.00 0.00 3.18
283 288 6.238648 CGGTTGACAACTAGTTTTGGAAAGAT 60.239 38.462 17.52 0.00 0.00 2.40
315 320 5.305902 TCATTGGCTCATTGCAATTATCCAT 59.694 36.000 15.08 5.27 45.15 3.41
400 413 1.134670 AGCCTCTCAAACCGCATCTAC 60.135 52.381 0.00 0.00 0.00 2.59
489 510 0.329261 TCAGCTCCCATCCAAACAGG 59.671 55.000 0.00 0.00 39.47 4.00
494 526 1.075374 CTCCCATCCAAACAGGGACAA 59.925 52.381 0.00 0.00 46.42 3.18
521 557 2.985896 CCACGGAGGCTCAAAAGAATA 58.014 47.619 17.69 0.00 0.00 1.75
525 568 3.008049 ACGGAGGCTCAAAAGAATACAGT 59.992 43.478 17.69 0.00 0.00 3.55
526 569 4.003648 CGGAGGCTCAAAAGAATACAGTT 58.996 43.478 17.69 0.00 0.00 3.16
527 570 4.093556 CGGAGGCTCAAAAGAATACAGTTC 59.906 45.833 17.69 0.00 0.00 3.01
528 571 5.003804 GGAGGCTCAAAAGAATACAGTTCA 58.996 41.667 17.69 0.00 0.00 3.18
529 572 5.123027 GGAGGCTCAAAAGAATACAGTTCAG 59.877 44.000 17.69 0.00 0.00 3.02
530 573 5.869579 AGGCTCAAAAGAATACAGTTCAGA 58.130 37.500 0.00 0.00 0.00 3.27
531 574 5.703130 AGGCTCAAAAGAATACAGTTCAGAC 59.297 40.000 0.00 0.00 0.00 3.51
532 575 5.703130 GGCTCAAAAGAATACAGTTCAGACT 59.297 40.000 0.00 0.00 36.25 3.24
533 576 6.205658 GGCTCAAAAGAATACAGTTCAGACTT 59.794 38.462 0.00 0.00 32.54 3.01
534 577 7.294473 GCTCAAAAGAATACAGTTCAGACTTC 58.706 38.462 0.00 0.00 32.54 3.01
617 662 0.938926 ATCTCCTCCCTTCCTCCCCT 60.939 60.000 0.00 0.00 0.00 4.79
621 666 1.398234 CTCCCTTCCTCCCCTTCCT 59.602 63.158 0.00 0.00 0.00 3.36
624 669 2.066999 CCTTCCTCCCCTTCCTCCG 61.067 68.421 0.00 0.00 0.00 4.63
627 672 4.806339 CCTCCCCTTCCTCCGCCT 62.806 72.222 0.00 0.00 0.00 5.52
629 674 4.798682 TCCCCTTCCTCCGCCTCC 62.799 72.222 0.00 0.00 0.00 4.30
631 676 3.474570 CCCTTCCTCCGCCTCCAG 61.475 72.222 0.00 0.00 0.00 3.86
632 677 4.168291 CCTTCCTCCGCCTCCAGC 62.168 72.222 0.00 0.00 38.52 4.85
633 678 3.393970 CTTCCTCCGCCTCCAGCA 61.394 66.667 0.00 0.00 44.04 4.41
634 679 3.672295 CTTCCTCCGCCTCCAGCAC 62.672 68.421 0.00 0.00 44.04 4.40
674 740 4.994471 CCAGCACCAGCACGAGCA 62.994 66.667 7.77 0.00 45.49 4.26
695 764 4.787280 CCCTCCTCTCCGGTGGCT 62.787 72.222 0.00 0.00 43.70 4.75
729 798 2.347114 CCCACGGCACATGTCAGA 59.653 61.111 0.00 0.00 0.00 3.27
740 809 3.002791 CACATGTCAGATACCGCAAACT 58.997 45.455 0.00 0.00 0.00 2.66
755 824 1.201429 AAACTCCCGTGGCATCTCCT 61.201 55.000 0.00 0.00 35.26 3.69
756 825 1.903877 AACTCCCGTGGCATCTCCTG 61.904 60.000 0.00 0.00 35.26 3.86
759 828 2.659063 CCCGTGGCATCTCCTGTCA 61.659 63.158 0.00 0.00 37.05 3.58
761 830 1.153489 CGTGGCATCTCCTGTCAGG 60.153 63.158 13.21 13.21 40.99 3.86
762 831 1.607801 CGTGGCATCTCCTGTCAGGA 61.608 60.000 20.67 20.67 45.88 3.86
820 893 1.202222 GCCACAACATATGCTCTGCAC 60.202 52.381 1.58 0.00 43.04 4.57
1230 1315 4.101448 ATGCAGGGGCTCACGTCC 62.101 66.667 0.00 0.00 41.91 4.79
1386 1927 4.639755 TCTCAAGTGTGTGCAAGAATTTGA 59.360 37.500 0.00 0.00 36.36 2.69
1477 2018 9.390795 CGCATCTGATTTATAAGAATTTTCCAG 57.609 33.333 0.00 0.00 0.00 3.86
1491 2032 7.553881 GAATTTTCCAGACGATAATTCTCCA 57.446 36.000 0.00 0.00 41.76 3.86
1518 2059 2.435059 GGTGGCAGAAGCGTCCTC 60.435 66.667 0.00 0.00 43.41 3.71
1519 2060 2.343758 GTGGCAGAAGCGTCCTCA 59.656 61.111 0.00 0.00 43.41 3.86
1531 2072 1.880027 GCGTCCTCAATTGGTCAACTT 59.120 47.619 5.42 0.00 0.00 2.66
1543 2084 8.482128 TCAATTGGTCAACTTTGTTTTATTCCT 58.518 29.630 5.42 0.00 0.00 3.36
1582 2131 9.982651 TTTGGCTTGTATAGACAGATAATACTC 57.017 33.333 0.00 0.00 44.57 2.59
1583 2132 7.817641 TGGCTTGTATAGACAGATAATACTCG 58.182 38.462 0.00 0.00 36.81 4.18
1584 2133 7.664318 TGGCTTGTATAGACAGATAATACTCGA 59.336 37.037 0.00 0.00 36.81 4.04
1586 2135 9.497030 GCTTGTATAGACAGATAATACTCGATG 57.503 37.037 0.00 0.00 36.76 3.84
1770 2366 4.701651 AGATGCTACCATGATCATGTGT 57.298 40.909 29.23 26.34 37.11 3.72
1793 2390 7.118825 GTGTAGATTTGTACAGAGGGGTTTAAC 59.881 40.741 0.00 0.00 33.52 2.01
1836 2434 7.712639 CAGTTGTGCCTACTATAAAGATGATGT 59.287 37.037 0.00 0.00 0.00 3.06
1882 3644 3.182590 TTGCCTTCTCTGCACGGCT 62.183 57.895 0.00 0.00 42.90 5.52
1919 3692 9.111613 TGAATTTTCTGAAAACTTGCATTTCAT 57.888 25.926 17.06 0.00 43.61 2.57
1980 6696 6.837992 CAAATTCAAAATCATTTGGGAGCAG 58.162 36.000 1.86 0.00 44.88 4.24
2000 6716 2.061220 TGCTAGCACTGAGCAACCT 58.939 52.632 14.93 0.00 46.71 3.50
2031 7423 6.214191 TCTAAAACTTTGCAAACATGTGGA 57.786 33.333 8.05 0.00 0.00 4.02
2033 7425 7.099764 TCTAAAACTTTGCAAACATGTGGAAA 58.900 30.769 8.05 0.63 36.60 3.13
2034 7426 6.566197 AAAACTTTGCAAACATGTGGAAAA 57.434 29.167 8.05 1.25 38.21 2.29
2035 7427 6.756299 AAACTTTGCAAACATGTGGAAAAT 57.244 29.167 8.05 0.00 38.21 1.82
2036 7428 6.756299 AACTTTGCAAACATGTGGAAAATT 57.244 29.167 8.05 0.00 38.21 1.82
2039 7431 6.373774 ACTTTGCAAACATGTGGAAAATTTCA 59.626 30.769 8.05 0.00 38.21 2.69
2040 7432 6.748333 TTGCAAACATGTGGAAAATTTCAA 57.252 29.167 8.09 0.00 0.00 2.69
2041 7433 6.116680 TGCAAACATGTGGAAAATTTCAAC 57.883 33.333 6.30 6.30 34.07 3.18
2043 7435 6.149973 TGCAAACATGTGGAAAATTTCAACAA 59.850 30.769 18.61 4.32 46.08 2.83
2044 7436 7.025963 GCAAACATGTGGAAAATTTCAACAAA 58.974 30.769 18.61 0.00 46.08 2.83
2045 7437 7.540055 GCAAACATGTGGAAAATTTCAACAAAA 59.460 29.630 18.61 0.00 46.08 2.44
2046 7438 9.570488 CAAACATGTGGAAAATTTCAACAAAAT 57.430 25.926 18.61 5.87 46.08 1.82
2064 7456 9.881529 CAACAAAATTTCAAATATTTCAGTGGG 57.118 29.630 0.00 0.00 0.00 4.61
2065 7457 8.620116 ACAAAATTTCAAATATTTCAGTGGGG 57.380 30.769 0.00 0.00 0.00 4.96
2066 7458 8.217111 ACAAAATTTCAAATATTTCAGTGGGGT 58.783 29.630 0.00 0.00 0.00 4.95
2067 7459 8.720562 CAAAATTTCAAATATTTCAGTGGGGTC 58.279 33.333 0.00 0.00 0.00 4.46
2068 7460 5.993748 TTTCAAATATTTCAGTGGGGTCC 57.006 39.130 0.00 0.00 0.00 4.46
2069 7461 3.616219 TCAAATATTTCAGTGGGGTCCG 58.384 45.455 0.00 0.00 0.00 4.79
2070 7462 3.264706 TCAAATATTTCAGTGGGGTCCGA 59.735 43.478 0.00 0.00 0.00 4.55
2071 7463 4.013728 CAAATATTTCAGTGGGGTCCGAA 58.986 43.478 0.00 0.00 0.00 4.30
2072 7464 4.310022 AATATTTCAGTGGGGTCCGAAA 57.690 40.909 0.00 0.00 0.00 3.46
2073 7465 2.899303 ATTTCAGTGGGGTCCGAAAT 57.101 45.000 0.00 0.00 34.16 2.17
2074 7466 5.640158 ATATTTCAGTGGGGTCCGAAATA 57.360 39.130 9.83 9.83 41.82 1.40
2075 7467 4.519906 ATTTCAGTGGGGTCCGAAATAT 57.480 40.909 0.00 0.00 36.56 1.28
2076 7468 4.310022 TTTCAGTGGGGTCCGAAATATT 57.690 40.909 0.00 0.00 0.00 1.28
2077 7469 4.310022 TTCAGTGGGGTCCGAAATATTT 57.690 40.909 0.00 0.00 0.00 1.40
2078 7470 4.310022 TCAGTGGGGTCCGAAATATTTT 57.690 40.909 1.43 0.00 0.00 1.82
2079 7471 4.668636 TCAGTGGGGTCCGAAATATTTTT 58.331 39.130 1.43 0.00 0.00 1.94
2080 7472 5.817784 TCAGTGGGGTCCGAAATATTTTTA 58.182 37.500 1.43 0.00 0.00 1.52
2081 7473 6.246919 TCAGTGGGGTCCGAAATATTTTTAA 58.753 36.000 1.43 0.00 0.00 1.52
2082 7474 6.151480 TCAGTGGGGTCCGAAATATTTTTAAC 59.849 38.462 1.43 1.36 0.00 2.01
2083 7475 5.419788 AGTGGGGTCCGAAATATTTTTAACC 59.580 40.000 1.43 9.57 0.00 2.85
2084 7476 4.710865 TGGGGTCCGAAATATTTTTAACCC 59.289 41.667 24.24 24.24 39.34 4.11
2085 7477 4.099881 GGGGTCCGAAATATTTTTAACCCC 59.900 45.833 29.94 29.94 45.57 4.95
2086 7478 4.202040 GGGTCCGAAATATTTTTAACCCCG 60.202 45.833 22.96 12.59 36.77 5.73
2087 7479 4.639755 GGTCCGAAATATTTTTAACCCCGA 59.360 41.667 1.43 0.00 0.00 5.14
2088 7480 5.125257 GGTCCGAAATATTTTTAACCCCGAA 59.875 40.000 1.43 0.00 0.00 4.30
2089 7481 6.350027 GGTCCGAAATATTTTTAACCCCGAAA 60.350 38.462 1.43 0.00 0.00 3.46
2090 7482 7.259882 GTCCGAAATATTTTTAACCCCGAAAT 58.740 34.615 1.43 0.00 0.00 2.17
2091 7483 7.760794 GTCCGAAATATTTTTAACCCCGAAATT 59.239 33.333 1.43 0.00 0.00 1.82
2092 7484 8.312564 TCCGAAATATTTTTAACCCCGAAATTT 58.687 29.630 1.43 0.00 0.00 1.82
2093 7485 8.937884 CCGAAATATTTTTAACCCCGAAATTTT 58.062 29.630 1.43 0.00 0.00 1.82
2094 7486 9.748100 CGAAATATTTTTAACCCCGAAATTTTG 57.252 29.630 1.43 0.00 0.00 2.44
2098 7490 7.956420 ATTTTTAACCCCGAAATTTTGAGAC 57.044 32.000 7.02 0.00 0.00 3.36
2099 7491 6.466885 TTTTAACCCCGAAATTTTGAGACA 57.533 33.333 7.02 0.00 0.00 3.41
2100 7492 5.699097 TTAACCCCGAAATTTTGAGACAG 57.301 39.130 7.02 0.00 0.00 3.51
2101 7493 3.502123 ACCCCGAAATTTTGAGACAGA 57.498 42.857 7.02 0.00 0.00 3.41
2102 7494 4.034285 ACCCCGAAATTTTGAGACAGAT 57.966 40.909 7.02 0.00 0.00 2.90
2103 7495 5.174037 ACCCCGAAATTTTGAGACAGATA 57.826 39.130 7.02 0.00 0.00 1.98
2104 7496 4.941873 ACCCCGAAATTTTGAGACAGATAC 59.058 41.667 7.02 0.00 0.00 2.24
2105 7497 4.941263 CCCCGAAATTTTGAGACAGATACA 59.059 41.667 7.02 0.00 0.00 2.29
2106 7498 5.414454 CCCCGAAATTTTGAGACAGATACAA 59.586 40.000 7.02 0.00 0.00 2.41
2107 7499 6.072175 CCCCGAAATTTTGAGACAGATACAAA 60.072 38.462 7.02 0.00 0.00 2.83
2108 7500 6.801862 CCCGAAATTTTGAGACAGATACAAAC 59.198 38.462 7.02 0.00 34.09 2.93
2109 7501 7.359595 CCGAAATTTTGAGACAGATACAAACA 58.640 34.615 7.02 0.00 34.09 2.83
2110 7502 7.535258 CCGAAATTTTGAGACAGATACAAACAG 59.465 37.037 7.02 0.00 34.09 3.16
2111 7503 8.282592 CGAAATTTTGAGACAGATACAAACAGA 58.717 33.333 0.00 0.00 34.09 3.41
2116 7508 9.554395 TTTTGAGACAGATACAAACAGATTACA 57.446 29.630 0.00 0.00 34.09 2.41
2117 7509 9.554395 TTTGAGACAGATACAAACAGATTACAA 57.446 29.630 0.00 0.00 0.00 2.41
2118 7510 9.554395 TTGAGACAGATACAAACAGATTACAAA 57.446 29.630 0.00 0.00 0.00 2.83
2119 7511 9.554395 TGAGACAGATACAAACAGATTACAAAA 57.446 29.630 0.00 0.00 0.00 2.44
2178 7570 7.401955 AGTGGAATTTGAAATCTCAAGATCC 57.598 36.000 7.60 7.60 42.48 3.36
2179 7571 6.094603 AGTGGAATTTGAAATCTCAAGATCCG 59.905 38.462 9.22 0.00 43.93 4.18
2180 7572 6.094048 GTGGAATTTGAAATCTCAAGATCCGA 59.906 38.462 9.22 0.00 43.93 4.55
2181 7573 6.658816 TGGAATTTGAAATCTCAAGATCCGAA 59.341 34.615 9.22 0.00 43.93 4.30
2182 7574 7.176515 TGGAATTTGAAATCTCAAGATCCGAAA 59.823 33.333 9.22 0.00 43.93 3.46
2183 7575 8.193438 GGAATTTGAAATCTCAAGATCCGAAAT 58.807 33.333 0.00 0.00 42.48 2.17
2192 7584 9.618890 AATCTCAAGATCCGAAATAATTTCTGA 57.381 29.630 0.00 0.00 37.32 3.27
2193 7585 9.618890 ATCTCAAGATCCGAAATAATTTCTGAA 57.381 29.630 0.00 0.00 36.66 3.02
2194 7586 9.448438 TCTCAAGATCCGAAATAATTTCTGAAA 57.552 29.630 5.15 5.15 36.66 2.69
2214 7606 7.376435 TGAAATTTCGCATATTTCAGTGAGA 57.624 32.000 13.34 0.00 43.41 3.27
2215 7607 7.988737 TGAAATTTCGCATATTTCAGTGAGAT 58.011 30.769 13.34 1.31 43.41 2.75
2216 7608 8.124823 TGAAATTTCGCATATTTCAGTGAGATC 58.875 33.333 13.34 0.00 43.41 2.75
2217 7609 5.991328 TTTCGCATATTTCAGTGAGATCC 57.009 39.130 0.00 0.00 0.00 3.36
2218 7610 3.642705 TCGCATATTTCAGTGAGATCCG 58.357 45.455 0.00 2.81 0.00 4.18
2219 7611 3.317993 TCGCATATTTCAGTGAGATCCGA 59.682 43.478 0.00 4.96 0.00 4.55
2220 7612 4.051237 CGCATATTTCAGTGAGATCCGAA 58.949 43.478 0.00 0.00 0.00 4.30
2221 7613 4.507756 CGCATATTTCAGTGAGATCCGAAA 59.492 41.667 0.00 0.00 0.00 3.46
2222 7614 5.178252 CGCATATTTCAGTGAGATCCGAAAT 59.822 40.000 0.00 0.00 40.30 2.17
2224 7616 7.095649 CGCATATTTCAGTGAGATCCGAAATTA 60.096 37.037 0.00 0.00 38.61 1.40
2233 7625 9.922305 CAGTGAGATCCGAAATTATTTAGTTTC 57.078 33.333 0.00 0.00 0.00 2.78
2235 7627 8.062448 GTGAGATCCGAAATTATTTAGTTTCCG 58.938 37.037 0.00 0.00 30.83 4.30
2238 7630 9.338622 AGATCCGAAATTATTTAGTTTCCGAAT 57.661 29.630 0.00 0.00 30.83 3.34
2335 7729 5.879223 CAGAGGATTTGCAAGTATTCTCTGT 59.121 40.000 27.56 7.83 44.34 3.41
2336 7730 7.044181 CAGAGGATTTGCAAGTATTCTCTGTA 58.956 38.462 27.56 2.15 44.34 2.74
2355 7773 3.319972 TGTAGAGTAATCGGTGTATGGGC 59.680 47.826 0.00 0.00 0.00 5.36
2366 7784 2.001269 GTATGGGCCCTGTCCCTGT 61.001 63.158 25.70 1.14 46.67 4.00
2369 7787 0.270699 ATGGGCCCTGTCCCTGTATA 59.729 55.000 25.70 0.00 46.67 1.47
2394 7812 5.385509 AAACTTGTGGATGGGTTTATTCG 57.614 39.130 0.00 0.00 31.34 3.34
2416 7834 8.934023 TTCGCCCCTTCTTATATCAAAATATT 57.066 30.769 0.00 0.00 30.59 1.28
2418 7836 8.792633 TCGCCCCTTCTTATATCAAAATATTTG 58.207 33.333 0.39 0.00 30.59 2.32
2419 7837 8.576442 CGCCCCTTCTTATATCAAAATATTTGT 58.424 33.333 0.39 0.00 30.59 2.83
2477 8180 9.724839 TCTTTGTTTTAAGGATCGTTTAAACAG 57.275 29.630 29.01 23.00 31.68 3.16
2478 8181 9.724839 CTTTGTTTTAAGGATCGTTTAAACAGA 57.275 29.630 29.01 26.00 31.68 3.41
2734 9154 4.080687 ACCGCTACTTCTTCTACAAGTCT 58.919 43.478 0.00 0.00 35.63 3.24
3155 9599 3.706373 GCTCCGCCTCCAACCTCA 61.706 66.667 0.00 0.00 0.00 3.86
3176 9620 1.534476 TACTCCTTGGACGTGGCCA 60.534 57.895 0.00 0.00 35.78 5.36
3254 9698 2.989824 AGTACGCGTGGCTGGAGT 60.990 61.111 24.59 0.00 0.00 3.85
3304 9748 4.767255 CCGTGGCTGCTGGTCCTC 62.767 72.222 0.00 0.00 0.00 3.71
3473 9946 7.119846 GCCCTACTACTATATTTTTGCTCCATG 59.880 40.741 0.00 0.00 0.00 3.66
3508 9982 2.608016 GCAGACTAACTTTTTGGCTGGC 60.608 50.000 5.54 0.00 0.00 4.85
3651 10147 6.805713 TGTTTCTGATTTCCTTGGTCTTTTC 58.194 36.000 0.00 0.00 0.00 2.29
3665 10165 9.631452 CCTTGGTCTTTTCTAGATTTTGAAATC 57.369 33.333 8.11 8.11 43.96 2.17
3682 10182 4.158949 TGAAATCGTCTCGGGATTCTTGTA 59.841 41.667 0.00 0.00 33.16 2.41
3713 10214 4.043310 TGAAGGTTCCTCAAGGATCACAAT 59.957 41.667 0.00 0.00 44.98 2.71
3818 10319 3.458579 CACCGCAACGACGACGAG 61.459 66.667 15.32 7.19 42.66 4.18
3824 10325 1.154525 CAACGACGACGAGTACGCT 60.155 57.895 15.32 0.00 43.96 5.07
3894 10396 2.296792 CATGGTGTTGGAGTTGTGTCA 58.703 47.619 0.00 0.00 0.00 3.58
3908 10410 7.601130 TGGAGTTGTGTCAAATATAGTGTACAC 59.399 37.037 18.56 18.56 38.13 2.90
3910 10412 7.372714 AGTTGTGTCAAATATAGTGTACACGA 58.627 34.615 19.93 15.77 39.98 4.35
3928 10430 7.992608 TGTACACGATAGGTTATAGTTGGACTA 59.007 37.037 0.00 0.00 43.77 2.59
3955 10457 9.161629 TGAGTTGTATTGTGTTTACATAGGATG 57.838 33.333 0.00 0.00 36.53 3.51
3975 10477 2.303890 TGTGGAGTCGTGTCCTAGTAGA 59.696 50.000 0.00 0.00 37.52 2.59
4005 10507 9.821240 CTTGTATCCTAGGCCTCTCATATATAT 57.179 37.037 9.68 0.00 0.00 0.86
4021 10523 2.464796 ATATCGGGGGTAGACACACA 57.535 50.000 0.00 0.00 0.00 3.72
4089 10592 1.302752 GCATGTGCCAGTGTCCAGA 60.303 57.895 0.00 0.00 34.31 3.86
4189 10692 4.682860 GTGAACCTCGTTAACAAATCTCGA 59.317 41.667 6.39 0.00 27.94 4.04
4200 10703 2.262211 CAAATCTCGATGTCGTGCTCA 58.738 47.619 2.04 0.00 40.80 4.26
4231 10734 0.744874 GGTCCTCGGATGATCAACGA 59.255 55.000 20.21 20.21 35.14 3.85
4236 10740 3.826729 TCCTCGGATGATCAACGATATGT 59.173 43.478 21.25 0.00 35.93 2.29
4292 10796 1.826054 TTGTTTGAGGCCACGGTGG 60.826 57.895 22.87 22.87 41.55 4.61
4327 10834 3.929610 GGAGGTTTTGAAGAGATCGTGAG 59.070 47.826 0.00 0.00 0.00 3.51
4505 11012 4.570663 CGGATCAGCGGACGGTCC 62.571 72.222 17.38 17.38 0.00 4.46
4551 11059 0.459237 GTGCGGTGATCAGTCAGAGG 60.459 60.000 0.00 0.00 34.36 3.69
4558 11066 0.378962 GATCAGTCAGAGGTCGACCG 59.621 60.000 28.26 14.98 42.08 4.79
4601 11111 2.830506 GCGTGTGCGTATCGATCG 59.169 61.111 9.36 9.36 40.81 3.69
4699 11210 4.473520 CGGGGCTAGCTGGTGGTG 62.474 72.222 15.72 0.00 0.00 4.17
4700 11211 3.330720 GGGGCTAGCTGGTGGTGT 61.331 66.667 15.72 0.00 0.00 4.16
4721 11232 4.688192 CACGTGTTGTGCTTGTGG 57.312 55.556 7.58 0.00 42.70 4.17
4751 11262 3.075005 TCCCAGGAGCGTACAGGC 61.075 66.667 0.00 0.00 0.00 4.85
4762 11273 1.089481 CGTACAGGCCATGCAACGAT 61.089 55.000 5.01 0.00 41.64 3.73
4767 11278 0.530650 AGGCCATGCAACGATACTCG 60.531 55.000 5.01 0.00 46.93 4.18
4771 11282 1.591594 ATGCAACGATACTCGGCCG 60.592 57.895 22.12 22.12 45.59 6.13
4785 11296 4.082523 GCCGGGAGCTAGCACACA 62.083 66.667 18.83 0.00 38.99 3.72
4834 11347 0.686789 AAAAGAATTGCCAGGGCCAC 59.313 50.000 6.18 0.00 41.09 5.01
4845 11358 2.109387 GGGCCACGTGTGTGTACA 59.891 61.111 15.65 0.00 44.92 2.90
4846 11359 1.959226 GGGCCACGTGTGTGTACAG 60.959 63.158 15.65 0.00 44.92 2.74
4856 11369 0.951558 GTGTGTACAGGGGCAGTTTG 59.048 55.000 0.00 0.00 0.00 2.93
4857 11370 0.840617 TGTGTACAGGGGCAGTTTGA 59.159 50.000 0.00 0.00 0.00 2.69
4858 11371 1.423541 TGTGTACAGGGGCAGTTTGAT 59.576 47.619 0.00 0.00 0.00 2.57
4859 11372 2.158534 TGTGTACAGGGGCAGTTTGATT 60.159 45.455 0.00 0.00 0.00 2.57
4860 11373 2.228822 GTGTACAGGGGCAGTTTGATTG 59.771 50.000 0.00 0.00 0.00 2.67
4861 11374 1.818674 GTACAGGGGCAGTTTGATTGG 59.181 52.381 0.00 0.00 0.00 3.16
4862 11375 0.482446 ACAGGGGCAGTTTGATTGGA 59.518 50.000 0.00 0.00 0.00 3.53
4863 11376 0.890683 CAGGGGCAGTTTGATTGGAC 59.109 55.000 0.00 0.00 0.00 4.02
4864 11377 0.251787 AGGGGCAGTTTGATTGGACC 60.252 55.000 0.00 0.00 0.00 4.46
4865 11378 1.257750 GGGGCAGTTTGATTGGACCC 61.258 60.000 0.00 0.00 34.99 4.46
4866 11379 1.595093 GGGCAGTTTGATTGGACCCG 61.595 60.000 0.00 0.00 0.00 5.28
4867 11380 0.608035 GGCAGTTTGATTGGACCCGA 60.608 55.000 0.00 0.00 0.00 5.14
4871 11384 3.836949 CAGTTTGATTGGACCCGATTTG 58.163 45.455 0.00 0.00 0.00 2.32
4872 11385 2.825532 AGTTTGATTGGACCCGATTTGG 59.174 45.455 0.00 0.00 37.55 3.28
4873 11386 2.560981 GTTTGATTGGACCCGATTTGGT 59.439 45.455 0.00 0.00 42.79 3.67
4875 11388 2.442413 TGATTGGACCCGATTTGGTTC 58.558 47.619 0.00 0.00 39.24 3.62
4876 11389 2.041081 TGATTGGACCCGATTTGGTTCT 59.959 45.455 0.00 0.00 39.24 3.01
4877 11390 2.668144 TTGGACCCGATTTGGTTCTT 57.332 45.000 0.00 0.00 39.24 2.52
4878 11391 1.904287 TGGACCCGATTTGGTTCTTG 58.096 50.000 0.00 0.00 39.24 3.02
4879 11392 1.144093 TGGACCCGATTTGGTTCTTGT 59.856 47.619 0.00 0.00 39.24 3.16
4880 11393 2.235891 GGACCCGATTTGGTTCTTGTT 58.764 47.619 0.00 0.00 39.24 2.83
4881 11394 2.626266 GGACCCGATTTGGTTCTTGTTT 59.374 45.455 0.00 0.00 39.24 2.83
4882 11395 3.305131 GGACCCGATTTGGTTCTTGTTTC 60.305 47.826 0.00 0.00 39.24 2.78
4883 11396 3.562182 ACCCGATTTGGTTCTTGTTTCT 58.438 40.909 0.00 0.00 33.91 2.52
4884 11397 3.317993 ACCCGATTTGGTTCTTGTTTCTG 59.682 43.478 0.00 0.00 33.91 3.02
4885 11398 3.308530 CCGATTTGGTTCTTGTTTCTGC 58.691 45.455 0.00 0.00 0.00 4.26
4886 11399 3.004734 CCGATTTGGTTCTTGTTTCTGCT 59.995 43.478 0.00 0.00 0.00 4.24
4887 11400 4.499696 CCGATTTGGTTCTTGTTTCTGCTT 60.500 41.667 0.00 0.00 0.00 3.91
4907 11420 1.302033 AAGGTGCACGGAGAAGCTG 60.302 57.895 11.45 0.00 33.80 4.24
4908 11421 2.031163 GGTGCACGGAGAAGCTGT 59.969 61.111 11.45 0.00 36.21 4.40
4909 11422 1.185618 AGGTGCACGGAGAAGCTGTA 61.186 55.000 11.45 0.00 33.84 2.74
4910 11423 0.320421 GGTGCACGGAGAAGCTGTAA 60.320 55.000 11.45 0.00 33.84 2.41
4911 11424 1.508632 GTGCACGGAGAAGCTGTAAA 58.491 50.000 0.00 0.00 33.84 2.01
4912 11425 1.871039 GTGCACGGAGAAGCTGTAAAA 59.129 47.619 0.00 0.00 33.84 1.52
4913 11426 2.289547 GTGCACGGAGAAGCTGTAAAAA 59.710 45.455 0.00 0.00 33.84 1.94
4914 11427 2.289547 TGCACGGAGAAGCTGTAAAAAC 59.710 45.455 0.00 0.00 33.84 2.43
4915 11428 2.289547 GCACGGAGAAGCTGTAAAAACA 59.710 45.455 0.00 0.00 33.84 2.83
4916 11429 3.242936 GCACGGAGAAGCTGTAAAAACAA 60.243 43.478 0.00 0.00 33.84 2.83
4917 11430 4.732355 GCACGGAGAAGCTGTAAAAACAAA 60.732 41.667 0.00 0.00 33.84 2.83
4918 11431 5.519722 CACGGAGAAGCTGTAAAAACAAAT 58.480 37.500 0.00 0.00 33.84 2.32
4919 11432 6.664515 CACGGAGAAGCTGTAAAAACAAATA 58.335 36.000 0.00 0.00 33.84 1.40
4920 11433 6.797033 CACGGAGAAGCTGTAAAAACAAATAG 59.203 38.462 0.00 0.00 33.84 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.179468 GCCCATGAATTTGGCTGCAT 59.821 50.000 0.50 0.00 42.01 3.96
3 4 1.597989 GCCCATGAATTTGGCTGCA 59.402 52.632 0.50 0.00 42.01 4.41
4 5 4.526770 GCCCATGAATTTGGCTGC 57.473 55.556 0.00 0.00 42.01 5.25
7 8 2.936202 TCTAGAGCCCATGAATTTGGC 58.064 47.619 0.00 0.00 45.70 4.52
8 9 4.722220 TCATCTAGAGCCCATGAATTTGG 58.278 43.478 0.00 0.00 36.46 3.28
9 10 4.760715 CCTCATCTAGAGCCCATGAATTTG 59.239 45.833 0.00 0.00 43.31 2.32
10 11 4.414846 ACCTCATCTAGAGCCCATGAATTT 59.585 41.667 0.00 0.00 43.31 1.82
11 12 3.979347 ACCTCATCTAGAGCCCATGAATT 59.021 43.478 0.00 0.00 43.31 2.17
12 13 3.596101 ACCTCATCTAGAGCCCATGAAT 58.404 45.455 0.00 0.00 43.31 2.57
13 14 3.051940 ACCTCATCTAGAGCCCATGAA 57.948 47.619 0.00 0.00 43.31 2.57
14 15 2.783379 ACCTCATCTAGAGCCCATGA 57.217 50.000 0.00 0.00 43.31 3.07
15 16 3.853355 AAACCTCATCTAGAGCCCATG 57.147 47.619 0.00 0.00 43.31 3.66
16 17 3.117738 CCAAAACCTCATCTAGAGCCCAT 60.118 47.826 0.00 0.00 43.31 4.00
17 18 2.239654 CCAAAACCTCATCTAGAGCCCA 59.760 50.000 0.00 0.00 43.31 5.36
18 19 2.422093 CCCAAAACCTCATCTAGAGCCC 60.422 54.545 0.00 0.00 43.31 5.19
19 20 2.505819 TCCCAAAACCTCATCTAGAGCC 59.494 50.000 0.00 0.00 43.31 4.70
20 21 3.914426 TCCCAAAACCTCATCTAGAGC 57.086 47.619 0.00 0.00 43.31 4.09
21 22 4.226168 ACCTTCCCAAAACCTCATCTAGAG 59.774 45.833 0.00 0.00 44.31 2.43
22 23 4.019321 CACCTTCCCAAAACCTCATCTAGA 60.019 45.833 0.00 0.00 0.00 2.43
23 24 4.265073 CACCTTCCCAAAACCTCATCTAG 58.735 47.826 0.00 0.00 0.00 2.43
24 25 3.010138 CCACCTTCCCAAAACCTCATCTA 59.990 47.826 0.00 0.00 0.00 1.98
25 26 2.225117 CCACCTTCCCAAAACCTCATCT 60.225 50.000 0.00 0.00 0.00 2.90
26 27 2.171003 CCACCTTCCCAAAACCTCATC 58.829 52.381 0.00 0.00 0.00 2.92
27 28 1.203174 CCCACCTTCCCAAAACCTCAT 60.203 52.381 0.00 0.00 0.00 2.90
28 29 0.187361 CCCACCTTCCCAAAACCTCA 59.813 55.000 0.00 0.00 0.00 3.86
29 30 0.187606 ACCCACCTTCCCAAAACCTC 59.812 55.000 0.00 0.00 0.00 3.85
30 31 0.639943 AACCCACCTTCCCAAAACCT 59.360 50.000 0.00 0.00 0.00 3.50
31 32 0.756294 CAACCCACCTTCCCAAAACC 59.244 55.000 0.00 0.00 0.00 3.27
32 33 1.411246 GACAACCCACCTTCCCAAAAC 59.589 52.381 0.00 0.00 0.00 2.43
33 34 1.783071 GACAACCCACCTTCCCAAAA 58.217 50.000 0.00 0.00 0.00 2.44
34 35 0.466555 CGACAACCCACCTTCCCAAA 60.467 55.000 0.00 0.00 0.00 3.28
35 36 1.149627 CGACAACCCACCTTCCCAA 59.850 57.895 0.00 0.00 0.00 4.12
36 37 2.824880 CCGACAACCCACCTTCCCA 61.825 63.158 0.00 0.00 0.00 4.37
37 38 2.033602 CCGACAACCCACCTTCCC 59.966 66.667 0.00 0.00 0.00 3.97
38 39 1.003718 CTCCGACAACCCACCTTCC 60.004 63.158 0.00 0.00 0.00 3.46
39 40 0.320508 GACTCCGACAACCCACCTTC 60.321 60.000 0.00 0.00 0.00 3.46
40 41 1.752833 GACTCCGACAACCCACCTT 59.247 57.895 0.00 0.00 0.00 3.50
41 42 2.214920 GGACTCCGACAACCCACCT 61.215 63.158 0.00 0.00 0.00 4.00
42 43 0.901580 TAGGACTCCGACAACCCACC 60.902 60.000 0.00 0.00 0.00 4.61
43 44 0.245813 GTAGGACTCCGACAACCCAC 59.754 60.000 3.55 0.00 0.00 4.61
44 45 0.178955 TGTAGGACTCCGACAACCCA 60.179 55.000 8.48 0.00 36.28 4.51
45 46 1.134788 CATGTAGGACTCCGACAACCC 60.135 57.143 14.30 0.00 41.98 4.11
46 47 1.134788 CCATGTAGGACTCCGACAACC 60.135 57.143 14.30 0.00 41.98 3.77
47 48 1.739371 GCCATGTAGGACTCCGACAAC 60.739 57.143 14.30 4.77 41.98 3.32
48 49 0.535335 GCCATGTAGGACTCCGACAA 59.465 55.000 14.30 0.04 41.98 3.18
49 50 1.663379 CGCCATGTAGGACTCCGACA 61.663 60.000 12.88 12.88 42.78 4.35
50 51 1.065928 CGCCATGTAGGACTCCGAC 59.934 63.158 1.43 1.43 41.22 4.79
51 52 2.125326 CCGCCATGTAGGACTCCGA 61.125 63.158 0.00 0.00 41.22 4.55
52 53 2.076622 CTCCGCCATGTAGGACTCCG 62.077 65.000 2.60 0.00 41.22 4.63
53 54 0.755698 TCTCCGCCATGTAGGACTCC 60.756 60.000 2.60 0.00 41.22 3.85
54 55 1.271102 GATCTCCGCCATGTAGGACTC 59.729 57.143 2.60 0.69 41.22 3.36
55 56 1.333177 GATCTCCGCCATGTAGGACT 58.667 55.000 2.60 0.00 41.22 3.85
56 57 0.318762 GGATCTCCGCCATGTAGGAC 59.681 60.000 2.60 0.00 41.22 3.85
57 58 0.105709 TGGATCTCCGCCATGTAGGA 60.106 55.000 6.28 6.28 38.21 2.94
58 59 0.979665 ATGGATCTCCGCCATGTAGG 59.020 55.000 0.00 0.00 44.21 3.18
59 60 2.828520 AGTATGGATCTCCGCCATGTAG 59.171 50.000 0.00 0.00 45.39 2.74
60 61 2.826128 GAGTATGGATCTCCGCCATGTA 59.174 50.000 0.00 0.00 45.39 2.29
61 62 1.620819 GAGTATGGATCTCCGCCATGT 59.379 52.381 0.00 0.00 45.39 3.21
62 63 1.620323 TGAGTATGGATCTCCGCCATG 59.380 52.381 0.00 0.00 45.39 3.66
64 65 1.040646 GTGAGTATGGATCTCCGCCA 58.959 55.000 0.00 0.00 40.24 5.69
65 66 0.039074 CGTGAGTATGGATCTCCGCC 60.039 60.000 0.00 0.00 39.43 6.13
66 67 0.664767 GCGTGAGTATGGATCTCCGC 60.665 60.000 10.78 10.78 40.80 5.54
67 68 0.668535 TGCGTGAGTATGGATCTCCG 59.331 55.000 0.00 0.00 39.43 4.63
68 69 2.866762 GTTTGCGTGAGTATGGATCTCC 59.133 50.000 0.00 0.00 0.00 3.71
69 70 2.866762 GGTTTGCGTGAGTATGGATCTC 59.133 50.000 0.00 0.00 0.00 2.75
70 71 2.501723 AGGTTTGCGTGAGTATGGATCT 59.498 45.455 0.00 0.00 0.00 2.75
71 72 2.866762 GAGGTTTGCGTGAGTATGGATC 59.133 50.000 0.00 0.00 0.00 3.36
72 73 2.501723 AGAGGTTTGCGTGAGTATGGAT 59.498 45.455 0.00 0.00 0.00 3.41
73 74 1.899814 AGAGGTTTGCGTGAGTATGGA 59.100 47.619 0.00 0.00 0.00 3.41
74 75 2.271800 GAGAGGTTTGCGTGAGTATGG 58.728 52.381 0.00 0.00 0.00 2.74
75 76 2.093973 AGGAGAGGTTTGCGTGAGTATG 60.094 50.000 0.00 0.00 0.00 2.39
76 77 2.180276 AGGAGAGGTTTGCGTGAGTAT 58.820 47.619 0.00 0.00 0.00 2.12
77 78 1.629043 AGGAGAGGTTTGCGTGAGTA 58.371 50.000 0.00 0.00 0.00 2.59
78 79 1.629043 TAGGAGAGGTTTGCGTGAGT 58.371 50.000 0.00 0.00 0.00 3.41
79 80 2.028930 AGTTAGGAGAGGTTTGCGTGAG 60.029 50.000 0.00 0.00 0.00 3.51
80 81 1.968493 AGTTAGGAGAGGTTTGCGTGA 59.032 47.619 0.00 0.00 0.00 4.35
81 82 2.457366 AGTTAGGAGAGGTTTGCGTG 57.543 50.000 0.00 0.00 0.00 5.34
82 83 3.139077 CAAAGTTAGGAGAGGTTTGCGT 58.861 45.455 0.00 0.00 0.00 5.24
83 84 2.095718 GCAAAGTTAGGAGAGGTTTGCG 60.096 50.000 2.65 0.00 42.40 4.85
84 85 3.560902 GCAAAGTTAGGAGAGGTTTGC 57.439 47.619 2.65 2.65 44.29 3.68
85 86 4.156739 GGATGCAAAGTTAGGAGAGGTTTG 59.843 45.833 0.00 0.00 0.00 2.93
86 87 4.336280 GGATGCAAAGTTAGGAGAGGTTT 58.664 43.478 0.00 0.00 0.00 3.27
87 88 3.619979 CGGATGCAAAGTTAGGAGAGGTT 60.620 47.826 0.00 0.00 0.00 3.50
88 89 2.093447 CGGATGCAAAGTTAGGAGAGGT 60.093 50.000 0.00 0.00 0.00 3.85
89 90 2.555199 CGGATGCAAAGTTAGGAGAGG 58.445 52.381 0.00 0.00 0.00 3.69
90 91 2.093447 ACCGGATGCAAAGTTAGGAGAG 60.093 50.000 9.46 0.00 0.00 3.20
91 92 1.906574 ACCGGATGCAAAGTTAGGAGA 59.093 47.619 9.46 0.00 0.00 3.71
92 93 2.403252 ACCGGATGCAAAGTTAGGAG 57.597 50.000 9.46 0.00 0.00 3.69
93 94 2.817258 CAAACCGGATGCAAAGTTAGGA 59.183 45.455 9.46 0.00 0.00 2.94
94 95 2.671070 GCAAACCGGATGCAAAGTTAGG 60.671 50.000 25.12 0.00 43.29 2.69
95 96 2.595386 GCAAACCGGATGCAAAGTTAG 58.405 47.619 25.12 0.00 43.29 2.34
96 97 1.068885 CGCAAACCGGATGCAAAGTTA 60.069 47.619 27.70 0.00 44.01 2.24
97 98 0.318614 CGCAAACCGGATGCAAAGTT 60.319 50.000 27.70 1.20 44.01 2.66
98 99 1.169661 TCGCAAACCGGATGCAAAGT 61.170 50.000 27.70 0.00 44.01 2.66
99 100 0.039617 TTCGCAAACCGGATGCAAAG 60.040 50.000 27.70 16.48 44.01 2.77
100 101 0.385751 TTTCGCAAACCGGATGCAAA 59.614 45.000 27.70 23.04 44.01 3.68
101 102 0.385751 TTTTCGCAAACCGGATGCAA 59.614 45.000 27.70 20.01 44.01 4.08
102 103 0.600557 ATTTTCGCAAACCGGATGCA 59.399 45.000 27.70 16.59 44.01 3.96
103 104 1.653609 GAATTTTCGCAAACCGGATGC 59.346 47.619 21.78 21.78 40.41 3.91
104 105 1.910819 CGAATTTTCGCAAACCGGATG 59.089 47.619 9.46 8.22 44.26 3.51
105 106 2.256445 CGAATTTTCGCAAACCGGAT 57.744 45.000 9.46 0.00 44.26 4.18
106 107 3.757623 CGAATTTTCGCAAACCGGA 57.242 47.368 9.46 0.00 44.26 5.14
116 117 4.026310 ACGCGTCCATATGTACGAATTTTC 60.026 41.667 23.11 4.68 41.55 2.29
117 118 3.866910 ACGCGTCCATATGTACGAATTTT 59.133 39.130 23.11 0.51 41.55 1.82
118 119 3.450578 ACGCGTCCATATGTACGAATTT 58.549 40.909 23.11 2.16 41.55 1.82
119 120 3.088194 ACGCGTCCATATGTACGAATT 57.912 42.857 23.11 4.49 41.55 2.17
120 121 2.787601 ACGCGTCCATATGTACGAAT 57.212 45.000 23.11 8.05 41.55 3.34
121 122 2.159407 TGAACGCGTCCATATGTACGAA 60.159 45.455 23.11 1.57 41.55 3.85
122 123 1.401199 TGAACGCGTCCATATGTACGA 59.599 47.619 23.11 0.22 41.55 3.43
123 124 1.830086 TGAACGCGTCCATATGTACG 58.170 50.000 14.44 15.71 41.92 3.67
124 125 3.242248 GTCTTGAACGCGTCCATATGTAC 59.758 47.826 14.44 0.00 0.00 2.90
125 126 3.441163 GTCTTGAACGCGTCCATATGTA 58.559 45.455 14.44 0.00 0.00 2.29
126 127 2.268298 GTCTTGAACGCGTCCATATGT 58.732 47.619 14.44 0.00 0.00 2.29
127 128 1.255342 CGTCTTGAACGCGTCCATATG 59.745 52.381 14.44 0.00 45.76 1.78
128 129 1.556564 CGTCTTGAACGCGTCCATAT 58.443 50.000 14.44 0.00 45.76 1.78
129 130 3.024423 CGTCTTGAACGCGTCCATA 57.976 52.632 14.44 0.00 45.76 2.74
130 131 3.856508 CGTCTTGAACGCGTCCAT 58.143 55.556 14.44 0.00 45.76 3.41
138 139 0.505655 GTGCCGTACACGTCTTGAAC 59.494 55.000 0.58 0.00 40.07 3.18
139 140 2.889578 GTGCCGTACACGTCTTGAA 58.110 52.632 0.58 0.00 40.07 2.69
140 141 4.639824 GTGCCGTACACGTCTTGA 57.360 55.556 0.58 0.00 40.07 3.02
148 149 2.102109 ATCCAACCGTGTGCCGTACA 62.102 55.000 0.00 0.00 36.82 2.90
149 150 1.375013 ATCCAACCGTGTGCCGTAC 60.375 57.895 0.00 0.00 33.66 3.67
150 151 1.374885 CATCCAACCGTGTGCCGTA 60.375 57.895 0.00 0.00 33.66 4.02
151 152 2.668212 CATCCAACCGTGTGCCGT 60.668 61.111 0.00 0.00 33.66 5.68
152 153 3.430862 CCATCCAACCGTGTGCCG 61.431 66.667 0.00 0.00 0.00 5.69
153 154 3.747976 GCCATCCAACCGTGTGCC 61.748 66.667 0.00 0.00 0.00 5.01
154 155 2.081425 TTTGCCATCCAACCGTGTGC 62.081 55.000 0.00 0.00 31.97 4.57
155 156 0.387202 TTTTGCCATCCAACCGTGTG 59.613 50.000 0.00 0.00 31.97 3.82
156 157 1.115467 TTTTTGCCATCCAACCGTGT 58.885 45.000 0.00 0.00 31.97 4.49
157 158 3.976339 TTTTTGCCATCCAACCGTG 57.024 47.368 0.00 0.00 31.97 4.94
283 288 5.633117 TGCAATGAGCCAATGATTAGGATA 58.367 37.500 0.00 0.00 44.83 2.59
489 510 1.676006 CCTCCGTGGCAATATTTGTCC 59.324 52.381 0.00 0.00 33.37 4.02
521 557 2.896685 CCTCCTCTGAAGTCTGAACTGT 59.103 50.000 0.00 0.00 35.36 3.55
525 568 3.576118 CTGTTCCTCCTCTGAAGTCTGAA 59.424 47.826 0.00 0.00 0.00 3.02
526 569 3.161067 CTGTTCCTCCTCTGAAGTCTGA 58.839 50.000 0.00 0.00 0.00 3.27
527 570 3.161067 TCTGTTCCTCCTCTGAAGTCTG 58.839 50.000 0.00 0.00 0.00 3.51
528 571 3.534357 TCTGTTCCTCCTCTGAAGTCT 57.466 47.619 0.00 0.00 0.00 3.24
529 572 5.923733 TTATCTGTTCCTCCTCTGAAGTC 57.076 43.478 0.00 0.00 0.00 3.01
530 573 6.688073 TTTTATCTGTTCCTCCTCTGAAGT 57.312 37.500 0.00 0.00 0.00 3.01
617 662 3.706373 GTGCTGGAGGCGGAGGAA 61.706 66.667 0.00 0.00 45.43 3.36
657 702 4.994471 TGCTCGTGCTGGTGCTGG 62.994 66.667 11.19 0.00 40.48 4.85
658 703 3.720193 GTGCTCGTGCTGGTGCTG 61.720 66.667 11.19 0.00 40.48 4.41
729 798 1.078708 CCACGGGAGTTTGCGGTAT 60.079 57.895 0.00 0.00 44.67 2.73
740 809 2.284625 ACAGGAGATGCCACGGGA 60.285 61.111 0.00 0.00 40.02 5.14
755 824 0.676184 GCATATCCTCGCTCCTGACA 59.324 55.000 0.00 0.00 0.00 3.58
756 825 0.965439 AGCATATCCTCGCTCCTGAC 59.035 55.000 0.00 0.00 31.16 3.51
820 893 8.888579 AATAGTATTATGGGACGAAGACTTTG 57.111 34.615 0.50 0.50 32.14 2.77
1074 1159 2.121963 AAGAGGACCCTGGCCACA 60.122 61.111 0.00 0.00 0.00 4.17
1114 1199 1.278637 CCTGGTTCACGCAACGAAC 59.721 57.895 0.00 0.00 41.66 3.95
1230 1315 2.169789 CGCGCAGAGGAACATGAGG 61.170 63.158 8.75 0.00 0.00 3.86
1349 1888 2.435805 ACTTGAGAGTTGTTCAGAGCCA 59.564 45.455 0.00 0.00 29.87 4.75
1446 1987 6.866010 TTCTTATAAATCAGATGCGCACAT 57.134 33.333 14.90 0.00 39.98 3.21
1447 1988 6.866010 ATTCTTATAAATCAGATGCGCACA 57.134 33.333 14.90 0.00 0.00 4.57
1448 1989 8.566008 AAAATTCTTATAAATCAGATGCGCAC 57.434 30.769 14.90 7.11 0.00 5.34
1449 1990 7.862372 GGAAAATTCTTATAAATCAGATGCGCA 59.138 33.333 14.96 14.96 0.00 6.09
1450 1991 7.862372 TGGAAAATTCTTATAAATCAGATGCGC 59.138 33.333 0.00 0.00 0.00 6.09
1455 1996 9.884636 TCGTCTGGAAAATTCTTATAAATCAGA 57.115 29.630 0.00 0.00 0.00 3.27
1477 2018 7.812669 ACCAAATTTTTGTGGAGAATTATCGTC 59.187 33.333 0.82 0.00 38.36 4.20
1489 2030 3.191078 TCTGCCACCAAATTTTTGTGG 57.809 42.857 23.50 23.50 39.82 4.17
1491 2032 3.205338 GCTTCTGCCACCAAATTTTTGT 58.795 40.909 2.63 0.00 36.45 2.83
1518 2059 8.661352 AGGAATAAAACAAAGTTGACCAATTG 57.339 30.769 0.00 0.00 0.00 2.32
1519 2060 8.482128 TGAGGAATAAAACAAAGTTGACCAATT 58.518 29.630 0.00 0.00 0.00 2.32
1531 2072 6.100404 AGCAAAGCATGAGGAATAAAACAA 57.900 33.333 0.00 0.00 0.00 2.83
1543 2084 2.873472 CAAGCCAAAAAGCAAAGCATGA 59.127 40.909 0.00 0.00 34.23 3.07
1579 2126 4.441634 GGGTATCTGCTAAACACATCGAGT 60.442 45.833 0.00 0.00 0.00 4.18
1582 2131 3.792401 TGGGTATCTGCTAAACACATCG 58.208 45.455 0.00 0.00 0.00 3.84
1583 2132 4.811557 GTCTGGGTATCTGCTAAACACATC 59.188 45.833 0.00 0.00 0.00 3.06
1584 2133 4.225042 TGTCTGGGTATCTGCTAAACACAT 59.775 41.667 0.00 0.00 0.00 3.21
1586 2135 4.202245 TGTCTGGGTATCTGCTAAACAC 57.798 45.455 0.00 0.00 0.00 3.32
1626 2187 9.452287 ACAAGCAATGCCATTTTTATTATCTTT 57.548 25.926 0.00 0.00 0.00 2.52
1628 2189 9.754382 CTACAAGCAATGCCATTTTTATTATCT 57.246 29.630 0.00 0.00 0.00 1.98
1629 2190 8.490355 GCTACAAGCAATGCCATTTTTATTATC 58.510 33.333 0.00 0.00 41.89 1.75
1630 2191 8.369218 GCTACAAGCAATGCCATTTTTATTAT 57.631 30.769 0.00 0.00 41.89 1.28
1631 2192 7.769272 GCTACAAGCAATGCCATTTTTATTA 57.231 32.000 0.00 0.00 41.89 0.98
1632 2193 6.667007 GCTACAAGCAATGCCATTTTTATT 57.333 33.333 0.00 0.00 41.89 1.40
1664 2240 3.945921 GGGGTAGCTGAAATTAACCTCAC 59.054 47.826 0.00 0.00 30.65 3.51
1770 2366 7.310858 GGAGTTAAACCCCTCTGTACAAATCTA 60.311 40.741 0.00 0.00 0.00 1.98
1793 2390 1.340211 ACTGACTGGTCGGTAGAGGAG 60.340 57.143 12.84 0.00 46.57 3.69
1836 2434 2.989909 TCGTCCCGAGTATGTCAGTTA 58.010 47.619 0.00 0.00 0.00 2.24
1910 3683 7.048629 TGGAAACTACTTTTGATGAAATGCA 57.951 32.000 0.00 0.00 0.00 3.96
1919 3692 5.183140 GCCTAAGCATGGAAACTACTTTTGA 59.817 40.000 0.00 0.00 39.53 2.69
1965 6681 0.822164 GCAGCTGCTCCCAAATGATT 59.178 50.000 31.33 0.00 38.21 2.57
1991 6707 7.492352 GTTTTAGAAAACTCTAGGTTGCTCA 57.508 36.000 10.03 0.00 43.68 4.26
2039 7431 9.065798 CCCCACTGAAATATTTGAAATTTTGTT 57.934 29.630 5.17 0.00 0.00 2.83
2040 7432 8.217111 ACCCCACTGAAATATTTGAAATTTTGT 58.783 29.630 5.17 0.00 0.00 2.83
2041 7433 8.620116 ACCCCACTGAAATATTTGAAATTTTG 57.380 30.769 5.17 0.00 0.00 2.44
2043 7435 7.394016 GGACCCCACTGAAATATTTGAAATTT 58.606 34.615 5.17 0.00 0.00 1.82
2044 7436 6.350949 CGGACCCCACTGAAATATTTGAAATT 60.351 38.462 5.17 0.00 0.00 1.82
2045 7437 5.127031 CGGACCCCACTGAAATATTTGAAAT 59.873 40.000 5.17 0.00 0.00 2.17
2046 7438 4.461081 CGGACCCCACTGAAATATTTGAAA 59.539 41.667 5.17 0.00 0.00 2.69
2048 7440 3.264706 TCGGACCCCACTGAAATATTTGA 59.735 43.478 5.17 0.00 0.00 2.69
2049 7441 3.616219 TCGGACCCCACTGAAATATTTG 58.384 45.455 5.17 0.00 0.00 2.32
2050 7442 4.310022 TTCGGACCCCACTGAAATATTT 57.690 40.909 0.00 0.00 33.06 1.40
2051 7443 4.310022 TTTCGGACCCCACTGAAATATT 57.690 40.909 0.00 0.00 39.32 1.28
2052 7444 4.519906 ATTTCGGACCCCACTGAAATAT 57.480 40.909 11.97 0.00 46.98 1.28
2054 7446 2.899303 ATTTCGGACCCCACTGAAAT 57.101 45.000 0.00 0.00 45.04 2.17
2055 7447 4.310022 AATATTTCGGACCCCACTGAAA 57.690 40.909 0.00 0.00 45.21 2.69
2056 7448 4.310022 AAATATTTCGGACCCCACTGAA 57.690 40.909 0.00 0.00 33.98 3.02
2057 7449 4.310022 AAAATATTTCGGACCCCACTGA 57.690 40.909 0.10 0.00 0.00 3.41
2058 7450 6.327154 GTTAAAAATATTTCGGACCCCACTG 58.673 40.000 0.10 0.00 0.00 3.66
2059 7451 5.419788 GGTTAAAAATATTTCGGACCCCACT 59.580 40.000 0.10 0.00 0.00 4.00
2060 7452 5.394443 GGGTTAAAAATATTTCGGACCCCAC 60.394 44.000 22.96 8.80 38.77 4.61
2061 7453 4.710865 GGGTTAAAAATATTTCGGACCCCA 59.289 41.667 22.96 0.00 38.77 4.96
2062 7454 5.266733 GGGTTAAAAATATTTCGGACCCC 57.733 43.478 22.96 15.61 38.77 4.95
2063 7455 4.202040 CGGGGTTAAAAATATTTCGGACCC 60.202 45.833 24.24 24.24 41.22 4.46
2064 7456 4.639755 TCGGGGTTAAAAATATTTCGGACC 59.360 41.667 14.05 14.05 0.00 4.46
2065 7457 5.816449 TCGGGGTTAAAAATATTTCGGAC 57.184 39.130 0.10 0.86 0.00 4.79
2066 7458 6.830873 TTTCGGGGTTAAAAATATTTCGGA 57.169 33.333 0.10 0.00 0.00 4.55
2067 7459 8.481974 AAATTTCGGGGTTAAAAATATTTCGG 57.518 30.769 0.10 0.00 0.00 4.30
2068 7460 9.748100 CAAAATTTCGGGGTTAAAAATATTTCG 57.252 29.630 0.10 0.00 0.00 3.46
2072 7464 9.647797 GTCTCAAAATTTCGGGGTTAAAAATAT 57.352 29.630 0.00 0.00 0.00 1.28
2073 7465 8.639761 TGTCTCAAAATTTCGGGGTTAAAAATA 58.360 29.630 0.00 0.00 0.00 1.40
2074 7466 7.501844 TGTCTCAAAATTTCGGGGTTAAAAAT 58.498 30.769 0.00 0.00 0.00 1.82
2075 7467 6.875076 TGTCTCAAAATTTCGGGGTTAAAAA 58.125 32.000 0.00 0.00 0.00 1.94
2076 7468 6.321690 TCTGTCTCAAAATTTCGGGGTTAAAA 59.678 34.615 0.00 0.00 0.00 1.52
2077 7469 5.828859 TCTGTCTCAAAATTTCGGGGTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
2078 7470 5.378332 TCTGTCTCAAAATTTCGGGGTTAA 58.622 37.500 0.00 0.00 0.00 2.01
2079 7471 4.975631 TCTGTCTCAAAATTTCGGGGTTA 58.024 39.130 0.00 0.00 0.00 2.85
2080 7472 3.827722 TCTGTCTCAAAATTTCGGGGTT 58.172 40.909 0.00 0.00 0.00 4.11
2081 7473 3.502123 TCTGTCTCAAAATTTCGGGGT 57.498 42.857 0.00 0.00 0.00 4.95
2082 7474 4.941263 TGTATCTGTCTCAAAATTTCGGGG 59.059 41.667 0.00 0.00 0.00 5.73
2083 7475 6.494893 TTGTATCTGTCTCAAAATTTCGGG 57.505 37.500 0.00 0.00 0.00 5.14
2084 7476 7.359595 TGTTTGTATCTGTCTCAAAATTTCGG 58.640 34.615 0.00 0.00 33.80 4.30
2085 7477 8.282592 TCTGTTTGTATCTGTCTCAAAATTTCG 58.717 33.333 0.00 0.00 33.80 3.46
2090 7482 9.554395 TGTAATCTGTTTGTATCTGTCTCAAAA 57.446 29.630 0.00 0.00 33.80 2.44
2091 7483 9.554395 TTGTAATCTGTTTGTATCTGTCTCAAA 57.446 29.630 0.00 0.00 0.00 2.69
2092 7484 9.554395 TTTGTAATCTGTTTGTATCTGTCTCAA 57.446 29.630 0.00 0.00 0.00 3.02
2093 7485 9.554395 TTTTGTAATCTGTTTGTATCTGTCTCA 57.446 29.630 0.00 0.00 0.00 3.27
2152 7544 8.960591 GGATCTTGAGATTTCAAATTCCACTTA 58.039 33.333 16.25 0.00 42.48 2.24
2153 7545 7.362401 CGGATCTTGAGATTTCAAATTCCACTT 60.362 37.037 19.02 0.00 42.48 3.16
2154 7546 6.094603 CGGATCTTGAGATTTCAAATTCCACT 59.905 38.462 19.02 0.00 42.48 4.00
2155 7547 6.094048 TCGGATCTTGAGATTTCAAATTCCAC 59.906 38.462 19.02 3.06 42.48 4.02
2156 7548 6.179756 TCGGATCTTGAGATTTCAAATTCCA 58.820 36.000 19.02 9.36 42.48 3.53
2157 7549 6.683974 TCGGATCTTGAGATTTCAAATTCC 57.316 37.500 13.15 13.15 42.48 3.01
2166 7558 9.618890 TCAGAAATTATTTCGGATCTTGAGATT 57.381 29.630 14.62 0.00 44.29 2.40
2167 7559 9.618890 TTCAGAAATTATTTCGGATCTTGAGAT 57.381 29.630 18.13 0.00 42.05 2.75
2168 7560 9.448438 TTTCAGAAATTATTTCGGATCTTGAGA 57.552 29.630 18.13 6.47 42.05 3.27
2190 7582 7.376435 TCTCACTGAAATATGCGAAATTTCA 57.624 32.000 17.99 15.75 46.08 2.69
2191 7583 7.589221 GGATCTCACTGAAATATGCGAAATTTC 59.411 37.037 8.20 8.20 41.60 2.17
2192 7584 7.420800 GGATCTCACTGAAATATGCGAAATTT 58.579 34.615 0.00 0.00 0.00 1.82
2193 7585 6.293081 CGGATCTCACTGAAATATGCGAAATT 60.293 38.462 0.00 0.00 33.88 1.82
2194 7586 5.178252 CGGATCTCACTGAAATATGCGAAAT 59.822 40.000 0.00 0.00 33.88 2.17
2195 7587 4.507756 CGGATCTCACTGAAATATGCGAAA 59.492 41.667 0.00 0.00 33.88 3.46
2196 7588 4.051237 CGGATCTCACTGAAATATGCGAA 58.949 43.478 0.00 0.00 33.88 4.70
2197 7589 3.317993 TCGGATCTCACTGAAATATGCGA 59.682 43.478 7.69 7.69 37.93 5.10
2198 7590 3.642705 TCGGATCTCACTGAAATATGCG 58.357 45.455 0.00 0.00 33.40 4.73
2199 7591 5.991328 TTTCGGATCTCACTGAAATATGC 57.009 39.130 0.00 0.00 39.32 3.14
2204 7596 9.667107 ACTAAATAATTTCGGATCTCACTGAAA 57.333 29.630 0.00 0.00 45.21 2.69
2205 7597 9.667107 AACTAAATAATTTCGGATCTCACTGAA 57.333 29.630 0.00 0.00 33.98 3.02
2206 7598 9.667107 AAACTAAATAATTTCGGATCTCACTGA 57.333 29.630 0.00 0.00 0.00 3.41
2207 7599 9.922305 GAAACTAAATAATTTCGGATCTCACTG 57.078 33.333 0.00 0.00 0.00 3.66
2208 7600 9.110502 GGAAACTAAATAATTTCGGATCTCACT 57.889 33.333 0.00 0.00 35.97 3.41
2209 7601 8.062448 CGGAAACTAAATAATTTCGGATCTCAC 58.938 37.037 0.00 0.00 37.34 3.51
2210 7602 7.982919 TCGGAAACTAAATAATTTCGGATCTCA 59.017 33.333 0.00 0.00 38.49 3.27
2211 7603 8.361592 TCGGAAACTAAATAATTTCGGATCTC 57.638 34.615 0.00 0.00 38.49 2.75
2212 7604 8.726870 TTCGGAAACTAAATAATTTCGGATCT 57.273 30.769 5.76 0.00 41.16 2.75
2213 7605 9.946165 AATTCGGAAACTAAATAATTTCGGATC 57.054 29.630 0.00 0.00 41.16 3.36
2229 7621 8.806177 ATACACAGGTTTTTAAATTCGGAAAC 57.194 30.769 0.00 0.00 0.00 2.78
2314 7708 7.093112 ACTCTACAGAGAATACTTGCAAATCCT 60.093 37.037 13.13 0.00 44.74 3.24
2335 7729 2.895404 GGCCCATACACCGATTACTCTA 59.105 50.000 0.00 0.00 0.00 2.43
2336 7730 1.692519 GGCCCATACACCGATTACTCT 59.307 52.381 0.00 0.00 0.00 3.24
2355 7773 5.189145 ACAAGTTTACTATACAGGGACAGGG 59.811 44.000 0.00 0.00 0.00 4.45
2369 7787 6.150474 CGAATAAACCCATCCACAAGTTTACT 59.850 38.462 0.00 0.00 37.47 2.24
2394 7812 9.914131 GACAAATATTTTGATATAAGAAGGGGC 57.086 33.333 6.96 0.00 0.00 5.80
2487 8190 6.317893 ACAAAAGAACAGTAGAAACATCCGTT 59.682 34.615 0.00 0.00 36.73 4.44
2490 8193 7.027778 ACACAAAAGAACAGTAGAAACATCC 57.972 36.000 0.00 0.00 0.00 3.51
2502 8897 8.101654 AGTAAACACTGTTACACAAAAGAACA 57.898 30.769 0.00 0.00 36.59 3.18
2503 8898 8.959734 AAGTAAACACTGTTACACAAAAGAAC 57.040 30.769 0.00 0.00 36.59 3.01
2518 8913 7.977293 GTGAAAATACCCACAAAAGTAAACACT 59.023 33.333 0.00 0.00 33.72 3.55
3155 9599 0.320697 GCCACGTCCAAGGAGTAGTT 59.679 55.000 0.00 0.00 0.00 2.24
3408 9852 4.452733 GGACGTGCCCGGAGAAGG 62.453 72.222 0.73 0.00 38.78 3.46
3508 9982 3.142951 AGATCCTCGTCTAGTTCATCCG 58.857 50.000 0.00 0.00 0.00 4.18
3651 10147 5.348986 TCCCGAGACGATTTCAAAATCTAG 58.651 41.667 12.32 2.50 41.99 2.43
3665 10165 5.121768 ACAAAATTACAAGAATCCCGAGACG 59.878 40.000 0.00 0.00 0.00 4.18
3666 10166 6.496338 ACAAAATTACAAGAATCCCGAGAC 57.504 37.500 0.00 0.00 0.00 3.36
3667 10167 6.712998 TCAACAAAATTACAAGAATCCCGAGA 59.287 34.615 0.00 0.00 0.00 4.04
3668 10168 6.908825 TCAACAAAATTACAAGAATCCCGAG 58.091 36.000 0.00 0.00 0.00 4.63
3670 10170 6.586082 CCTTCAACAAAATTACAAGAATCCCG 59.414 38.462 0.00 0.00 0.00 5.14
3682 10182 5.660864 TCCTTGAGGAACCTTCAACAAAATT 59.339 36.000 0.00 0.00 42.18 1.82
3908 10410 8.338072 ACTCATAGTCCAACTATAACCTATCG 57.662 38.462 0.00 0.00 39.26 2.92
3910 10412 9.435570 ACAACTCATAGTCCAACTATAACCTAT 57.564 33.333 0.00 0.00 39.26 2.57
3918 10420 7.903145 ACACAATACAACTCATAGTCCAACTA 58.097 34.615 0.00 0.00 34.82 2.24
3928 10430 9.905713 ATCCTATGTAAACACAATACAACTCAT 57.094 29.630 0.00 0.00 36.88 2.90
3955 10457 2.983229 TCTACTAGGACACGACTCCAC 58.017 52.381 0.00 0.00 31.94 4.02
3975 10477 3.707102 GAGAGGCCTAGGATACAAGTGTT 59.293 47.826 14.75 0.00 41.41 3.32
4005 10507 0.611200 CATTGTGTGTCTACCCCCGA 59.389 55.000 0.00 0.00 0.00 5.14
4021 10523 7.723616 TGCTATTATGTTGGCATAGGTTACATT 59.276 33.333 5.64 0.00 38.64 2.71
4080 10583 3.374402 CCGGTCGCTCTGGACACT 61.374 66.667 0.00 0.00 45.09 3.55
4118 10621 2.248248 CTATGGACGCTCCTTCCCATA 58.752 52.381 0.00 0.00 39.80 2.74
4189 10692 1.399440 GCAATCACATGAGCACGACAT 59.601 47.619 0.00 0.00 0.00 3.06
4200 10703 1.679944 CCGAGGACCAAGCAATCACAT 60.680 52.381 0.00 0.00 0.00 3.21
4236 10740 7.989416 ACCACTTGTTAAAATAAATCCGAGA 57.011 32.000 0.00 0.00 0.00 4.04
4292 10796 3.990959 AAACCTCCTCCAGATCAACTC 57.009 47.619 0.00 0.00 0.00 3.01
4327 10834 2.125512 ATCGACCAGCTTCCGCAC 60.126 61.111 0.00 0.00 39.10 5.34
4440 10947 0.387202 CTCGCCGAGAACTCCATCAT 59.613 55.000 8.82 0.00 0.00 2.45
4518 11025 2.813908 GCACGTCCCTTACAGCCG 60.814 66.667 0.00 0.00 0.00 5.52
4519 11026 2.813908 CGCACGTCCCTTACAGCC 60.814 66.667 0.00 0.00 0.00 4.85
4581 11089 0.866061 GATCGATACGCACACGCTGT 60.866 55.000 0.00 0.00 45.53 4.40
4582 11090 1.840061 GATCGATACGCACACGCTG 59.160 57.895 0.00 0.00 45.53 5.18
4583 11091 1.654440 CGATCGATACGCACACGCT 60.654 57.895 10.26 0.00 45.53 5.07
4584 11092 2.830506 CGATCGATACGCACACGC 59.169 61.111 10.26 0.00 45.53 5.34
4642 11152 1.670406 CACTTCGGCTTCAGCTGCT 60.670 57.895 9.47 0.00 46.62 4.24
4733 11244 3.082579 GCCTGTACGCTCCTGGGAG 62.083 68.421 11.97 11.97 44.56 4.30
4744 11255 1.597663 GTATCGTTGCATGGCCTGTAC 59.402 52.381 3.32 2.45 0.00 2.90
4762 11273 2.203308 CTAGCTCCCGGCCGAGTA 60.203 66.667 30.73 10.54 43.05 2.59
4767 11278 4.840005 GTGTGCTAGCTCCCGGCC 62.840 72.222 17.23 0.00 43.05 6.13
4771 11282 2.079925 CTTCTTTGTGTGCTAGCTCCC 58.920 52.381 17.23 4.09 0.00 4.30
4783 11294 9.956720 CAAACAAATCTCTGTATTCTTCTTTGT 57.043 29.630 0.00 0.00 37.22 2.83
4834 11347 1.667830 CTGCCCCTGTACACACACG 60.668 63.158 0.00 0.00 0.00 4.49
4845 11358 0.251787 GGTCCAATCAAACTGCCCCT 60.252 55.000 0.00 0.00 0.00 4.79
4846 11359 1.257750 GGGTCCAATCAAACTGCCCC 61.258 60.000 0.00 0.00 0.00 5.80
4862 11375 3.317993 CAGAAACAAGAACCAAATCGGGT 59.682 43.478 0.00 0.00 45.04 5.28
4863 11376 3.857010 GCAGAAACAAGAACCAAATCGGG 60.857 47.826 0.00 0.00 40.22 5.14
4864 11377 3.004734 AGCAGAAACAAGAACCAAATCGG 59.995 43.478 0.00 0.00 42.50 4.18
4865 11378 4.228912 AGCAGAAACAAGAACCAAATCG 57.771 40.909 0.00 0.00 0.00 3.34
4866 11379 5.591099 TGAAGCAGAAACAAGAACCAAATC 58.409 37.500 0.00 0.00 0.00 2.17
4867 11380 5.596836 TGAAGCAGAAACAAGAACCAAAT 57.403 34.783 0.00 0.00 0.00 2.32
4871 11384 3.381590 ACCTTGAAGCAGAAACAAGAACC 59.618 43.478 0.00 0.00 42.12 3.62
4872 11385 4.354587 CACCTTGAAGCAGAAACAAGAAC 58.645 43.478 0.00 0.00 42.12 3.01
4873 11386 3.181487 GCACCTTGAAGCAGAAACAAGAA 60.181 43.478 0.00 0.00 42.12 2.52
4875 11388 2.099592 TGCACCTTGAAGCAGAAACAAG 59.900 45.455 0.00 0.00 40.12 3.16
4876 11389 2.098614 TGCACCTTGAAGCAGAAACAA 58.901 42.857 0.00 0.00 35.51 2.83
4877 11390 1.405105 GTGCACCTTGAAGCAGAAACA 59.595 47.619 5.22 0.00 42.14 2.83
4878 11391 1.597937 CGTGCACCTTGAAGCAGAAAC 60.598 52.381 12.15 0.00 42.14 2.78
4879 11392 0.662619 CGTGCACCTTGAAGCAGAAA 59.337 50.000 12.15 0.00 42.14 2.52
4880 11393 1.165907 CCGTGCACCTTGAAGCAGAA 61.166 55.000 12.15 0.00 42.14 3.02
4881 11394 1.597854 CCGTGCACCTTGAAGCAGA 60.598 57.895 12.15 0.00 42.14 4.26
4882 11395 1.572085 CTCCGTGCACCTTGAAGCAG 61.572 60.000 12.15 0.00 42.14 4.24
4883 11396 1.597854 CTCCGTGCACCTTGAAGCA 60.598 57.895 12.15 0.00 38.65 3.91
4884 11397 0.884704 TTCTCCGTGCACCTTGAAGC 60.885 55.000 12.15 0.00 0.00 3.86
4885 11398 1.151668 CTTCTCCGTGCACCTTGAAG 58.848 55.000 12.15 16.61 0.00 3.02
4886 11399 0.884704 GCTTCTCCGTGCACCTTGAA 60.885 55.000 12.15 11.43 0.00 2.69
4887 11400 1.301716 GCTTCTCCGTGCACCTTGA 60.302 57.895 12.15 4.73 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.