Multiple sequence alignment - TraesCS5B01G125700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G125700 chr5B 100.000 7924 0 0 678 8601 228755818 228763741 0.000000e+00 14633.0
1 TraesCS5B01G125700 chr5B 90.535 1384 73 26 3462 4798 43868242 43869614 0.000000e+00 1777.0
2 TraesCS5B01G125700 chr5B 93.430 1035 43 5 3183 4192 262362983 262361949 0.000000e+00 1511.0
3 TraesCS5B01G125700 chr5B 86.142 1003 83 21 4312 5264 100175859 100176855 0.000000e+00 1031.0
4 TraesCS5B01G125700 chr5B 91.709 591 21 9 4729 5291 130925308 130925898 0.000000e+00 795.0
5 TraesCS5B01G125700 chr5B 100.000 426 0 0 1 426 228755141 228755566 0.000000e+00 787.0
6 TraesCS5B01G125700 chr5B 90.767 574 23 12 4749 5292 157392403 157392976 0.000000e+00 739.0
7 TraesCS5B01G125700 chr5B 89.039 593 34 12 4729 5291 412442644 412443235 0.000000e+00 706.0
8 TraesCS5B01G125700 chr5B 89.614 414 41 1 4685 5098 81537709 81538120 7.650000e-145 525.0
9 TraesCS5B01G125700 chr5B 94.805 231 8 3 5063 5289 525128155 525128385 2.950000e-94 357.0
10 TraesCS5B01G125700 chr5B 94.372 231 5 2 5063 5291 228758570 228758794 1.780000e-91 348.0
11 TraesCS5B01G125700 chr5B 96.491 114 4 0 809 922 228754926 228754813 1.140000e-43 189.0
12 TraesCS5B01G125700 chr5B 85.484 62 7 1 8517 8578 480406296 480406237 7.210000e-06 63.9
13 TraesCS5B01G125700 chr5A 92.403 2185 108 29 5290 7462 279561600 279563738 0.000000e+00 3062.0
14 TraesCS5B01G125700 chr5A 93.298 2074 111 16 936 2990 279559390 279561454 0.000000e+00 3035.0
15 TraesCS5B01G125700 chr5A 88.427 1901 130 30 3462 5291 13520864 13518983 0.000000e+00 2209.0
16 TraesCS5B01G125700 chr5A 90.253 513 41 5 7532 8035 279566573 279567085 0.000000e+00 662.0
17 TraesCS5B01G125700 chr5A 85.437 515 40 4 8084 8580 279567557 279568054 3.580000e-138 503.0
18 TraesCS5B01G125700 chr5A 90.136 294 24 5 4783 5075 367796154 367795865 2.270000e-100 377.0
19 TraesCS5B01G125700 chr5A 87.069 348 19 11 4966 5292 296482172 296482514 3.790000e-98 370.0
20 TraesCS5B01G125700 chr5A 96.732 153 5 0 3027 3179 279561451 279561603 1.110000e-63 255.0
21 TraesCS5B01G125700 chr5A 95.652 46 2 0 5991 6036 59700798 59700843 3.330000e-09 75.0
22 TraesCS5B01G125700 chr5A 79.130 115 18 4 811 922 622119433 622119322 3.330000e-09 75.0
23 TraesCS5B01G125700 chr5A 97.500 40 1 0 2985 3024 655994094 655994133 1.550000e-07 69.4
24 TraesCS5B01G125700 chr5D 92.897 1788 66 22 6070 7842 214086687 214088428 0.000000e+00 2542.0
25 TraesCS5B01G125700 chr5D 93.189 1013 64 3 937 1947 214081943 214082952 0.000000e+00 1483.0
26 TraesCS5B01G125700 chr5D 93.128 713 42 3 5290 6002 214084138 214084843 0.000000e+00 1038.0
27 TraesCS5B01G125700 chr5D 95.938 640 23 2 2387 3023 214083305 214083944 0.000000e+00 1035.0
28 TraesCS5B01G125700 chr5D 94.133 375 18 4 1983 2357 214082949 214083319 1.250000e-157 568.0
29 TraesCS5B01G125700 chr5D 88.650 326 28 8 4753 5075 297755973 297756292 1.050000e-103 388.0
30 TraesCS5B01G125700 chr5D 88.525 305 32 3 4771 5075 489103797 489104098 4.910000e-97 366.0
31 TraesCS5B01G125700 chr5D 90.074 272 14 7 4996 5264 210053489 210053228 2.970000e-89 340.0
32 TraesCS5B01G125700 chr5D 97.576 165 4 0 3018 3182 214083980 214084144 5.080000e-72 283.0
33 TraesCS5B01G125700 chr5D 100.000 28 0 0 6222 6249 214086579 214086552 1.600000e-02 52.8
34 TraesCS5B01G125700 chr6B 89.783 1938 89 35 3462 5293 308583101 308581167 0.000000e+00 2381.0
35 TraesCS5B01G125700 chr6B 87.421 1892 137 35 3462 5292 144898501 144896650 0.000000e+00 2082.0
36 TraesCS5B01G125700 chr6B 91.761 352 9 1 3467 3818 221404772 221405103 1.010000e-128 472.0
37 TraesCS5B01G125700 chr6B 95.918 245 10 0 678 922 204003707 204003951 1.740000e-106 398.0
38 TraesCS5B01G125700 chr6B 96.373 193 5 1 5101 5291 502312770 502312962 5.010000e-82 316.0
39 TraesCS5B01G125700 chr6B 95.855 193 6 1 5101 5291 308583143 308583335 2.330000e-80 311.0
40 TraesCS5B01G125700 chr6B 95.536 112 5 0 809 920 204003310 204003199 6.860000e-41 180.0
41 TraesCS5B01G125700 chr6B 92.308 65 4 1 8517 8580 452148036 452147972 3.310000e-14 91.6
42 TraesCS5B01G125700 chr6B 94.231 52 1 2 2982 3031 13651259 13651208 2.570000e-10 78.7
43 TraesCS5B01G125700 chr4B 89.540 1912 110 28 3462 5293 73279919 73278018 0.000000e+00 2340.0
44 TraesCS5B01G125700 chr4B 92.883 1124 56 9 3462 4571 634319462 634320575 0.000000e+00 1611.0
45 TraesCS5B01G125700 chr4B 85.563 1607 140 39 3753 5291 484748187 484749769 0.000000e+00 1598.0
46 TraesCS5B01G125700 chr4B 87.572 1207 69 30 4140 5293 58757328 58756150 0.000000e+00 1323.0
47 TraesCS5B01G125700 chr4B 88.077 671 28 12 4674 5293 242732310 242731641 0.000000e+00 749.0
48 TraesCS5B01G125700 chr4B 90.476 525 28 9 4779 5283 634321134 634321656 0.000000e+00 673.0
49 TraesCS5B01G125700 chr4B 89.259 540 36 10 4771 5291 100948136 100947600 0.000000e+00 656.0
50 TraesCS5B01G125700 chr4B 92.837 349 23 1 4716 5062 89522176 89521828 9.960000e-139 505.0
51 TraesCS5B01G125700 chr4B 88.636 396 28 4 4684 5062 285614228 285613833 4.700000e-127 466.0
52 TraesCS5B01G125700 chr4B 97.222 252 7 0 3179 3430 182237157 182237408 2.220000e-115 427.0
53 TraesCS5B01G125700 chr4B 95.918 245 10 0 678 922 376801088 376801332 1.740000e-106 398.0
54 TraesCS5B01G125700 chr4B 88.644 317 16 7 4996 5293 324975505 324975820 1.360000e-97 368.0
55 TraesCS5B01G125700 chr4B 92.308 260 18 2 1 260 376800694 376800951 1.360000e-97 368.0
56 TraesCS5B01G125700 chr4B 88.365 318 17 7 4999 5297 182238654 182238970 1.760000e-96 364.0
57 TraesCS5B01G125700 chr4B 88.050 318 17 8 4996 5294 409481752 409481437 2.950000e-94 357.0
58 TraesCS5B01G125700 chr4B 87.619 315 19 10 4996 5291 201538790 201539103 1.780000e-91 348.0
59 TraesCS5B01G125700 chr4B 95.855 193 6 1 5101 5291 73279919 73279727 2.330000e-80 311.0
60 TraesCS5B01G125700 chr4B 95.855 193 6 1 5101 5291 449365323 449365515 2.330000e-80 311.0
61 TraesCS5B01G125700 chr4B 95.337 193 7 1 5101 5291 182237214 182237406 1.080000e-78 305.0
62 TraesCS5B01G125700 chr4B 95.337 193 7 1 5101 5291 634319462 634319654 1.080000e-78 305.0
63 TraesCS5B01G125700 chr4B 93.846 130 6 2 809 938 376800479 376800352 2.450000e-45 195.0
64 TraesCS5B01G125700 chr4B 86.842 76 9 1 8506 8580 535751594 535751519 5.530000e-12 84.2
65 TraesCS5B01G125700 chr4B 95.652 46 2 0 5991 6036 22844121 22844076 3.330000e-09 75.0
66 TraesCS5B01G125700 chr4B 90.566 53 2 3 2983 3033 517166904 517166853 5.570000e-07 67.6
67 TraesCS5B01G125700 chr4B 92.500 40 3 0 5997 6036 524895739 524895778 3.350000e-04 58.4
68 TraesCS5B01G125700 chr2B 89.586 1882 96 36 3462 5270 519144782 519142928 0.000000e+00 2298.0
69 TraesCS5B01G125700 chr2B 88.266 1892 129 33 3463 5291 691253173 691251312 0.000000e+00 2178.0
70 TraesCS5B01G125700 chr2B 90.831 1167 73 14 3507 4656 620596805 620597954 0.000000e+00 1531.0
71 TraesCS5B01G125700 chr2B 91.600 500 15 11 3182 3654 195063532 195063033 0.000000e+00 665.0
72 TraesCS5B01G125700 chr2B 89.855 69 6 1 8513 8580 506150372 506150304 4.280000e-13 87.9
73 TraesCS5B01G125700 chr1B 89.201 1889 108 39 3462 5293 289084692 289086541 0.000000e+00 2270.0
74 TraesCS5B01G125700 chr1B 87.435 1934 126 41 3462 5294 57105600 57107517 0.000000e+00 2117.0
75 TraesCS5B01G125700 chr1B 91.243 571 30 10 4739 5291 324356792 324356224 0.000000e+00 760.0
76 TraesCS5B01G125700 chr1B 87.307 646 43 16 4684 5299 652522798 652522162 0.000000e+00 702.0
77 TraesCS5B01G125700 chr1B 87.960 598 29 16 4691 5270 567214161 567213589 0.000000e+00 665.0
78 TraesCS5B01G125700 chr1B 91.644 371 24 2 4691 5061 95745501 95745864 2.770000e-139 507.0
79 TraesCS5B01G125700 chr1B 97.222 252 6 1 3179 3430 57105544 57105794 7.980000e-115 425.0
80 TraesCS5B01G125700 chr1B 94.422 251 8 1 678 922 498682348 498682098 1.750000e-101 381.0
81 TraesCS5B01G125700 chr1B 96.373 193 5 1 5101 5291 402110610 402110802 5.010000e-82 316.0
82 TraesCS5B01G125700 chr1B 94.340 159 9 0 268 426 498682687 498682529 2.400000e-60 244.0
83 TraesCS5B01G125700 chr1B 93.043 115 7 1 809 922 498682929 498683043 5.340000e-37 167.0
84 TraesCS5B01G125700 chr1B 93.814 97 6 0 3473 3569 652563093 652562997 6.960000e-31 147.0
85 TraesCS5B01G125700 chr2A 88.612 1923 125 36 3462 5292 622982754 622984674 0.000000e+00 2252.0
86 TraesCS5B01G125700 chr2A 92.827 237 8 5 5064 5291 762152404 762152640 1.380000e-87 335.0
87 TraesCS5B01G125700 chr2A 90.909 55 5 0 5982 6036 498104566 498104620 3.330000e-09 75.0
88 TraesCS5B01G125700 chr2A 86.667 60 6 1 8521 8580 750956811 750956868 2.000000e-06 65.8
89 TraesCS5B01G125700 chr3B 88.315 1917 130 44 3462 5291 68495413 68497322 0.000000e+00 2213.0
90 TraesCS5B01G125700 chr3B 92.192 1268 47 13 3462 4681 256203101 256204364 0.000000e+00 1746.0
91 TraesCS5B01G125700 chr3B 91.516 1108 72 11 3470 4560 522241188 522242290 0.000000e+00 1506.0
92 TraesCS5B01G125700 chr3B 87.323 1199 66 29 4150 5291 181302389 181301220 0.000000e+00 1293.0
93 TraesCS5B01G125700 chr3B 83.101 1219 85 39 4151 5291 821101444 821102619 0.000000e+00 998.0
94 TraesCS5B01G125700 chr3B 84.375 736 69 18 4354 5062 565431824 565432540 0.000000e+00 680.0
95 TraesCS5B01G125700 chr3B 97.976 247 5 0 3182 3428 68497076 68497322 6.170000e-116 429.0
96 TraesCS5B01G125700 chr3B 97.233 253 6 1 3178 3430 574700752 574701003 2.220000e-115 427.0
97 TraesCS5B01G125700 chr3B 94.776 268 14 0 116 383 212889973 212889706 1.340000e-112 418.0
98 TraesCS5B01G125700 chr3B 95.918 245 10 0 678 922 212889640 212889396 1.740000e-106 398.0
99 TraesCS5B01G125700 chr3B 96.460 113 4 0 810 922 212890263 212890375 4.100000e-43 187.0
100 TraesCS5B01G125700 chr3B 97.727 44 1 0 45 88 212890016 212889973 9.260000e-10 76.8
101 TraesCS5B01G125700 chrUn 87.441 1911 149 46 3467 5291 75630881 75632786 0.000000e+00 2115.0
102 TraesCS5B01G125700 chrUn 87.395 1912 150 50 3467 5291 186678810 186676903 0.000000e+00 2111.0
103 TraesCS5B01G125700 chrUn 87.343 1912 149 37 3467 5295 275833509 275831608 0.000000e+00 2104.0
104 TraesCS5B01G125700 chrUn 86.715 1912 160 54 3467 5291 75639583 75641487 0.000000e+00 2037.0
105 TraesCS5B01G125700 chrUn 86.604 1911 163 54 3467 5291 186670903 186669000 0.000000e+00 2025.0
106 TraesCS5B01G125700 chrUn 86.516 1906 147 41 3467 5291 75644229 75646105 0.000000e+00 1995.0
107 TraesCS5B01G125700 chrUn 86.509 1905 148 49 3467 5291 186666258 186664383 0.000000e+00 1993.0
108 TraesCS5B01G125700 chrUn 83.280 1244 100 44 4127 5291 75636442 75637656 0.000000e+00 1046.0
109 TraesCS5B01G125700 chrUn 84.176 910 66 26 4454 5291 73918760 73919663 0.000000e+00 811.0
110 TraesCS5B01G125700 chrUn 88.737 293 14 5 5017 5291 469245271 469244980 2.970000e-89 340.0
111 TraesCS5B01G125700 chrUn 84.928 345 25 14 4753 5075 229258619 229258958 2.990000e-84 324.0
112 TraesCS5B01G125700 chrUn 86.349 315 18 7 4996 5291 428932066 428931758 3.870000e-83 320.0
113 TraesCS5B01G125700 chrUn 85.855 304 36 5 4996 5292 260887843 260888146 5.010000e-82 316.0
114 TraesCS5B01G125700 chrUn 85.855 304 36 5 4996 5292 263770922 263770619 5.010000e-82 316.0
115 TraesCS5B01G125700 chrUn 89.919 248 7 7 5062 5291 79627853 79627606 3.900000e-78 303.0
116 TraesCS5B01G125700 chrUn 94.819 193 8 1 5101 5291 36008151 36008343 5.050000e-77 300.0
117 TraesCS5B01G125700 chrUn 94.819 193 8 1 5101 5291 79627274 79627082 5.050000e-77 300.0
118 TraesCS5B01G125700 chrUn 94.301 193 9 1 5101 5291 260886850 260887042 2.350000e-75 294.0
119 TraesCS5B01G125700 chrUn 94.301 193 9 1 5101 5291 263771915 263771723 2.350000e-75 294.0
120 TraesCS5B01G125700 chrUn 89.388 245 9 4 5064 5291 275833566 275833322 8.450000e-75 292.0
121 TraesCS5B01G125700 chrUn 90.566 212 12 5 4436 4647 260887458 260887661 3.060000e-69 274.0
122 TraesCS5B01G125700 chrUn 90.566 212 12 5 4436 4647 263771307 263771104 3.060000e-69 274.0
123 TraesCS5B01G125700 chrUn 82.838 303 30 12 4794 5075 329033676 329033375 1.430000e-62 252.0
124 TraesCS5B01G125700 chrUn 83.556 225 18 6 4999 5205 108419516 108419293 8.810000e-45 193.0
125 TraesCS5B01G125700 chrUn 87.611 113 5 2 4507 4619 92943432 92943329 1.170000e-23 122.0
126 TraesCS5B01G125700 chrUn 97.619 42 1 0 5991 6032 96588324 96588283 1.200000e-08 73.1
127 TraesCS5B01G125700 chrUn 95.238 42 2 0 5991 6032 111041886 111041927 5.570000e-07 67.6
128 TraesCS5B01G125700 chrUn 91.304 46 4 0 5991 6036 257140547 257140502 7.210000e-06 63.9
129 TraesCS5B01G125700 chrUn 91.304 46 4 0 5991 6036 279873452 279873497 7.210000e-06 63.9
130 TraesCS5B01G125700 chr3A 90.533 1500 76 21 3467 4904 724741264 724739769 0.000000e+00 1923.0
131 TraesCS5B01G125700 chr3A 97.992 249 5 0 3182 3430 724741323 724741075 4.770000e-117 433.0
132 TraesCS5B01G125700 chr3A 94.815 270 13 1 1 270 668216657 668216925 3.710000e-113 420.0
133 TraesCS5B01G125700 chr3A 94.378 249 11 1 678 923 668217044 668217292 6.300000e-101 379.0
134 TraesCS5B01G125700 chr3A 97.727 44 0 1 2988 3030 163623580 163623623 3.330000e-09 75.0
135 TraesCS5B01G125700 chr4A 90.100 1505 90 24 3462 4912 688407711 688406212 0.000000e+00 1899.0
136 TraesCS5B01G125700 chr4A 95.745 47 2 0 5990 6036 618462173 618462219 9.260000e-10 76.8
137 TraesCS5B01G125700 chr4A 95.652 46 2 0 5991 6036 594030189 594030144 3.330000e-09 75.0
138 TraesCS5B01G125700 chr4A 93.617 47 1 1 2989 3033 718559304 718559258 1.550000e-07 69.4
139 TraesCS5B01G125700 chr1D 92.748 1117 72 7 3462 4571 375934920 375936034 0.000000e+00 1605.0
140 TraesCS5B01G125700 chr1D 86.676 743 34 16 4606 5292 375936424 375937157 0.000000e+00 763.0
141 TraesCS5B01G125700 chr1D 85.352 512 43 12 4569 5068 493215180 493214689 1.290000e-137 501.0
142 TraesCS5B01G125700 chr1D 94.191 241 14 0 4828 5068 321680046 321679806 1.360000e-97 368.0
143 TraesCS5B01G125700 chr1D 97.500 40 1 0 5997 6036 345717322 345717283 1.550000e-07 69.4
144 TraesCS5B01G125700 chr3D 86.717 1197 81 29 4171 5291 135251631 135250437 0.000000e+00 1258.0
145 TraesCS5B01G125700 chr3D 89.699 631 35 10 4691 5291 135243356 135243986 0.000000e+00 778.0
146 TraesCS5B01G125700 chr3D 88.054 519 52 8 4779 5291 609941981 609942495 2.660000e-169 606.0
147 TraesCS5B01G125700 chr3D 97.222 252 6 1 3179 3430 268942685 268942935 7.980000e-115 425.0
148 TraesCS5B01G125700 chr3D 88.791 339 27 9 4739 5075 135257199 135256870 1.040000e-108 405.0
149 TraesCS5B01G125700 chr3D 91.912 272 14 5 4996 5264 246592045 246591779 2.930000e-99 374.0
150 TraesCS5B01G125700 chr3D 95.855 193 6 1 5101 5291 268942741 268942933 2.330000e-80 311.0
151 TraesCS5B01G125700 chr3D 90.083 242 17 5 5027 5264 135253572 135253334 3.020000e-79 307.0
152 TraesCS5B01G125700 chr3D 91.379 116 7 2 807 922 53619341 53619453 1.160000e-33 156.0
153 TraesCS5B01G125700 chr3D 93.846 65 3 1 8517 8580 92269034 92269098 7.110000e-16 97.1
154 TraesCS5B01G125700 chr3D 92.308 65 4 1 8517 8580 58602167 58602103 3.310000e-14 91.6
155 TraesCS5B01G125700 chr3D 94.231 52 1 2 5986 6036 418123438 418123388 2.570000e-10 78.7
156 TraesCS5B01G125700 chr3D 100.000 42 0 0 2989 3030 552764597 552764638 2.570000e-10 78.7
157 TraesCS5B01G125700 chr7B 89.020 1020 56 14 3182 4171 160478907 160479900 0.000000e+00 1212.0
158 TraesCS5B01G125700 chr7B 94.161 548 31 1 3467 4013 428833479 428832932 0.000000e+00 833.0
159 TraesCS5B01G125700 chr6A 88.113 1060 51 13 3183 4171 381107062 381108117 0.000000e+00 1190.0
160 TraesCS5B01G125700 chr6A 87.188 640 39 17 4691 5291 539226934 539226299 0.000000e+00 688.0
161 TraesCS5B01G125700 chr6A 92.537 67 4 1 8517 8582 144703016 144703082 2.560000e-15 95.3
162 TraesCS5B01G125700 chr6A 95.652 46 2 0 5991 6036 356112330 356112285 3.330000e-09 75.0
163 TraesCS5B01G125700 chr1A 86.287 773 52 17 4578 5296 339690694 339689922 0.000000e+00 791.0
164 TraesCS5B01G125700 chr1A 95.337 193 7 1 5101 5291 372230871 372231063 1.080000e-78 305.0
165 TraesCS5B01G125700 chr1A 94.231 52 1 2 5986 6036 45583299 45583249 2.570000e-10 78.7
166 TraesCS5B01G125700 chr7A 87.794 680 37 14 4653 5292 678967012 678966339 0.000000e+00 754.0
167 TraesCS5B01G125700 chr7A 94.355 248 11 1 678 922 7915838 7915591 2.270000e-100 377.0
168 TraesCS5B01G125700 chr7A 84.848 297 18 9 1 270 7916253 7915957 3.060000e-69 274.0
169 TraesCS5B01G125700 chr7A 99.123 114 1 0 809 922 7916469 7916582 1.130000e-48 206.0
170 TraesCS5B01G125700 chr7A 97.826 46 1 0 5991 6036 572188303 572188348 7.160000e-11 80.5
171 TraesCS5B01G125700 chr4D 86.134 613 65 9 4043 4639 451044230 451043622 2.020000e-180 643.0
172 TraesCS5B01G125700 chr4D 90.741 270 18 5 4996 5262 236937885 236937620 3.820000e-93 353.0
173 TraesCS5B01G125700 chr4D 87.879 297 34 2 4779 5075 104840485 104840779 1.780000e-91 348.0
174 TraesCS5B01G125700 chr4D 85.672 335 19 8 4757 5068 385731154 385731482 8.330000e-85 326.0
175 TraesCS5B01G125700 chr4D 83.742 326 29 5 4771 5075 403412082 403412404 3.930000e-73 287.0
176 TraesCS5B01G125700 chr4D 97.674 43 1 0 2988 3030 397158976 397158934 3.330000e-09 75.0
177 TraesCS5B01G125700 chr6D 90.604 298 26 2 4771 5068 200483345 200483050 2.250000e-105 394.0
178 TraesCS5B01G125700 chr6D 84.661 339 24 7 4753 5068 235770970 235770637 6.480000e-81 313.0
179 TraesCS5B01G125700 chr6D 84.663 326 26 4 4771 5075 27349843 27350165 3.900000e-78 303.0
180 TraesCS5B01G125700 chr6D 91.667 60 4 1 5975 6033 57176665 57176724 1.990000e-11 82.4
181 TraesCS5B01G125700 chr6D 89.062 64 6 1 8517 8580 387415291 387415353 2.570000e-10 78.7
182 TraesCS5B01G125700 chr6D 97.222 36 1 0 5997 6032 144895063 144895028 2.590000e-05 62.1
183 TraesCS5B01G125700 chr7D 89.474 57 5 1 5991 6046 43365453 43365397 4.310000e-08 71.3
184 TraesCS5B01G125700 chr2D 90.385 52 3 1 2972 3023 35976979 35977028 5.570000e-07 67.6
185 TraesCS5B01G125700 chr2D 86.667 60 7 1 8521 8580 619500065 619500123 2.000000e-06 65.8
186 TraesCS5B01G125700 chr2D 97.143 35 1 0 6002 6036 624976456 624976490 9.320000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G125700 chr5B 228755141 228763741 8600 False 7710.000000 14633 100.000000 1 8601 2 chr5B.!!$F9 8600
1 TraesCS5B01G125700 chr5B 43868242 43869614 1372 False 1777.000000 1777 90.535000 3462 4798 1 chr5B.!!$F1 1336
2 TraesCS5B01G125700 chr5B 262361949 262362983 1034 True 1511.000000 1511 93.430000 3183 4192 1 chr5B.!!$R2 1009
3 TraesCS5B01G125700 chr5B 100175859 100176855 996 False 1031.000000 1031 86.142000 4312 5264 1 chr5B.!!$F3 952
4 TraesCS5B01G125700 chr5B 130925308 130925898 590 False 795.000000 795 91.709000 4729 5291 1 chr5B.!!$F4 562
5 TraesCS5B01G125700 chr5B 157392403 157392976 573 False 739.000000 739 90.767000 4749 5292 1 chr5B.!!$F5 543
6 TraesCS5B01G125700 chr5B 412442644 412443235 591 False 706.000000 706 89.039000 4729 5291 1 chr5B.!!$F7 562
7 TraesCS5B01G125700 chr5A 13518983 13520864 1881 True 2209.000000 2209 88.427000 3462 5291 1 chr5A.!!$R1 1829
8 TraesCS5B01G125700 chr5A 279559390 279568054 8664 False 1503.400000 3062 91.624600 936 8580 5 chr5A.!!$F4 7644
9 TraesCS5B01G125700 chr5D 214081943 214088428 6485 False 1158.166667 2542 94.476833 937 7842 6 chr5D.!!$F3 6905
10 TraesCS5B01G125700 chr6B 308581167 308583101 1934 True 2381.000000 2381 89.783000 3462 5293 1 chr6B.!!$R4 1831
11 TraesCS5B01G125700 chr6B 144896650 144898501 1851 True 2082.000000 2082 87.421000 3462 5292 1 chr6B.!!$R2 1830
12 TraesCS5B01G125700 chr4B 484748187 484749769 1582 False 1598.000000 1598 85.563000 3753 5291 1 chr4B.!!$F4 1538
13 TraesCS5B01G125700 chr4B 73278018 73279919 1901 True 1325.500000 2340 92.697500 3462 5293 2 chr4B.!!$R11 1831
14 TraesCS5B01G125700 chr4B 58756150 58757328 1178 True 1323.000000 1323 87.572000 4140 5293 1 chr4B.!!$R2 1153
15 TraesCS5B01G125700 chr4B 634319462 634321656 2194 False 863.000000 1611 92.898667 3462 5291 3 chr4B.!!$F8 1829
16 TraesCS5B01G125700 chr4B 242731641 242732310 669 True 749.000000 749 88.077000 4674 5293 1 chr4B.!!$R5 619
17 TraesCS5B01G125700 chr4B 100947600 100948136 536 True 656.000000 656 89.259000 4771 5291 1 chr4B.!!$R4 520
18 TraesCS5B01G125700 chr4B 376800694 376801332 638 False 383.000000 398 94.113000 1 922 2 chr4B.!!$F7 921
19 TraesCS5B01G125700 chr4B 182237157 182238970 1813 False 365.333333 427 93.641333 3179 5297 3 chr4B.!!$F6 2118
20 TraesCS5B01G125700 chr2B 519142928 519144782 1854 True 2298.000000 2298 89.586000 3462 5270 1 chr2B.!!$R3 1808
21 TraesCS5B01G125700 chr2B 691251312 691253173 1861 True 2178.000000 2178 88.266000 3463 5291 1 chr2B.!!$R4 1828
22 TraesCS5B01G125700 chr2B 620596805 620597954 1149 False 1531.000000 1531 90.831000 3507 4656 1 chr2B.!!$F1 1149
23 TraesCS5B01G125700 chr1B 289084692 289086541 1849 False 2270.000000 2270 89.201000 3462 5293 1 chr1B.!!$F2 1831
24 TraesCS5B01G125700 chr1B 57105544 57107517 1973 False 1271.000000 2117 92.328500 3179 5294 2 chr1B.!!$F5 2115
25 TraesCS5B01G125700 chr1B 324356224 324356792 568 True 760.000000 760 91.243000 4739 5291 1 chr1B.!!$R1 552
26 TraesCS5B01G125700 chr1B 652522162 652522798 636 True 702.000000 702 87.307000 4684 5299 1 chr1B.!!$R3 615
27 TraesCS5B01G125700 chr1B 567213589 567214161 572 True 665.000000 665 87.960000 4691 5270 1 chr1B.!!$R2 579
28 TraesCS5B01G125700 chr1B 498682098 498682687 589 True 312.500000 381 94.381000 268 922 2 chr1B.!!$R5 654
29 TraesCS5B01G125700 chr2A 622982754 622984674 1920 False 2252.000000 2252 88.612000 3462 5292 1 chr2A.!!$F2 1830
30 TraesCS5B01G125700 chr3B 256203101 256204364 1263 False 1746.000000 1746 92.192000 3462 4681 1 chr3B.!!$F2 1219
31 TraesCS5B01G125700 chr3B 522241188 522242290 1102 False 1506.000000 1506 91.516000 3470 4560 1 chr3B.!!$F3 1090
32 TraesCS5B01G125700 chr3B 68495413 68497322 1909 False 1321.000000 2213 93.145500 3182 5291 2 chr3B.!!$F7 2109
33 TraesCS5B01G125700 chr3B 181301220 181302389 1169 True 1293.000000 1293 87.323000 4150 5291 1 chr3B.!!$R1 1141
34 TraesCS5B01G125700 chr3B 821101444 821102619 1175 False 998.000000 998 83.101000 4151 5291 1 chr3B.!!$F6 1140
35 TraesCS5B01G125700 chr3B 565431824 565432540 716 False 680.000000 680 84.375000 4354 5062 1 chr3B.!!$F4 708
36 TraesCS5B01G125700 chr3B 212889396 212890016 620 True 297.600000 418 96.140333 45 922 3 chr3B.!!$R2 877
37 TraesCS5B01G125700 chrUn 186676903 186678810 1907 True 2111.000000 2111 87.395000 3467 5291 1 chrUn.!!$R4 1824
38 TraesCS5B01G125700 chrUn 186664383 186670903 6520 True 2009.000000 2025 86.556500 3467 5291 2 chrUn.!!$R10 1824
39 TraesCS5B01G125700 chrUn 75630881 75646105 15224 False 1798.250000 2115 85.988000 3467 5291 4 chrUn.!!$F6 1824
40 TraesCS5B01G125700 chrUn 275831608 275833566 1958 True 1198.000000 2104 88.365500 3467 5295 2 chrUn.!!$R12 1828
41 TraesCS5B01G125700 chrUn 73918760 73919663 903 False 811.000000 811 84.176000 4454 5291 1 chrUn.!!$F2 837
42 TraesCS5B01G125700 chrUn 79627082 79627853 771 True 301.500000 303 92.369000 5062 5291 2 chrUn.!!$R9 229
43 TraesCS5B01G125700 chrUn 260886850 260888146 1296 False 294.666667 316 90.240667 4436 5292 3 chrUn.!!$F7 856
44 TraesCS5B01G125700 chrUn 263770619 263771915 1296 True 294.666667 316 90.240667 4436 5292 3 chrUn.!!$R11 856
45 TraesCS5B01G125700 chr3A 724739769 724741323 1554 True 1178.000000 1923 94.262500 3182 4904 2 chr3A.!!$R1 1722
46 TraesCS5B01G125700 chr3A 668216657 668217292 635 False 399.500000 420 94.596500 1 923 2 chr3A.!!$F2 922
47 TraesCS5B01G125700 chr4A 688406212 688407711 1499 True 1899.000000 1899 90.100000 3462 4912 1 chr4A.!!$R2 1450
48 TraesCS5B01G125700 chr1D 375934920 375937157 2237 False 1184.000000 1605 89.712000 3462 5292 2 chr1D.!!$F1 1830
49 TraesCS5B01G125700 chr3D 135243356 135243986 630 False 778.000000 778 89.699000 4691 5291 1 chr3D.!!$F3 600
50 TraesCS5B01G125700 chr3D 135250437 135257199 6762 True 656.666667 1258 88.530333 4171 5291 3 chr3D.!!$R4 1120
51 TraesCS5B01G125700 chr3D 609941981 609942495 514 False 606.000000 606 88.054000 4779 5291 1 chr3D.!!$F5 512
52 TraesCS5B01G125700 chr7B 160478907 160479900 993 False 1212.000000 1212 89.020000 3182 4171 1 chr7B.!!$F1 989
53 TraesCS5B01G125700 chr7B 428832932 428833479 547 True 833.000000 833 94.161000 3467 4013 1 chr7B.!!$R1 546
54 TraesCS5B01G125700 chr6A 381107062 381108117 1055 False 1190.000000 1190 88.113000 3183 4171 1 chr6A.!!$F2 988
55 TraesCS5B01G125700 chr6A 539226299 539226934 635 True 688.000000 688 87.188000 4691 5291 1 chr6A.!!$R2 600
56 TraesCS5B01G125700 chr1A 339689922 339690694 772 True 791.000000 791 86.287000 4578 5296 1 chr1A.!!$R2 718
57 TraesCS5B01G125700 chr7A 678966339 678967012 673 True 754.000000 754 87.794000 4653 5292 1 chr7A.!!$R1 639
58 TraesCS5B01G125700 chr7A 7915591 7916253 662 True 325.500000 377 89.601500 1 922 2 chr7A.!!$R2 921
59 TraesCS5B01G125700 chr4D 451043622 451044230 608 True 643.000000 643 86.134000 4043 4639 1 chr4D.!!$R3 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
423 451 0.179020 CTCTGGGAAGGCACAACACA 60.179 55.000 0.00 0.00 0.00 3.72 F
1099 1136 0.462047 CGATGGGTAACTCACAGGCC 60.462 60.000 0.00 0.00 30.72 5.19 F
1107 1144 0.474660 AACTCACAGGCCTCTCCCTT 60.475 55.000 0.00 0.00 31.24 3.95 F
1369 1406 0.603707 TTTCCTTGTGAGCTCGCAGG 60.604 55.000 27.41 27.41 37.69 4.85 F
3344 3442 0.251077 CTTGACTCCCAAGCAAGGCT 60.251 55.000 0.00 0.00 44.90 4.58 F
3367 3465 0.035739 TTGACCCCTAAGCAACCGAC 59.964 55.000 0.00 0.00 0.00 4.79 F
3443 3541 0.240945 AACACTTGTTATGGCGCTGC 59.759 50.000 7.64 0.00 36.32 5.25 F
4223 4326 0.035036 CCTGATGCAGCGGATGAGAT 59.965 55.000 13.56 0.00 0.00 2.75 F
4227 4330 0.038435 ATGCAGCGGATGAGATCGAG 60.038 55.000 0.00 0.00 0.00 4.04 F
4230 4333 0.039617 CAGCGGATGAGATCGAGGTC 60.040 60.000 0.00 0.00 0.00 3.85 F
4403 4506 0.606673 GGGACTGGACTTGGTGAAGC 60.607 60.000 0.00 0.00 31.68 3.86 F
6006 28158 0.034283 ACCTACTCCCTCCGTCTCAC 60.034 60.000 0.00 0.00 0.00 3.51 F
6442 30372 2.269940 AGGCTAGAAGGGCAAAAGAGA 58.730 47.619 0.00 0.00 0.00 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1597 0.040794 AGCGGTAGGACAAGGGTACT 59.959 55.000 0.00 0.00 42.31 2.73 R
2886 2943 0.980423 AGAGCCAGGAGGAACAGTTC 59.020 55.000 4.52 4.52 36.89 3.01 R
3152 3250 6.455647 TGACAACAGTAGTACCTCAAGATTG 58.544 40.000 0.00 0.00 0.00 2.67 R
3348 3446 0.035739 GTCGGTTGCTTAGGGGTCAA 59.964 55.000 0.00 0.00 0.00 3.18 R
4204 4307 0.035036 ATCTCATCCGCTGCATCAGG 59.965 55.000 0.00 0.00 31.21 3.86 R
4208 4311 0.038435 CTCGATCTCATCCGCTGCAT 60.038 55.000 0.00 0.00 0.00 3.96 R
5210 23407 0.321298 TCGCTTGCTTAGGGGTCAAC 60.321 55.000 4.21 0.00 37.41 3.18 R
5588 27740 1.134946 ACTCAGTTGCACACTTTTGCC 59.865 47.619 0.00 0.00 42.25 4.52 R
5596 27748 1.209261 TCTGGTTCACTCAGTTGCACA 59.791 47.619 0.00 0.00 34.15 4.57 R
5986 28138 1.211457 GTGAGACGGAGGGAGTAGGTA 59.789 57.143 0.00 0.00 0.00 3.08 R
6066 28348 2.329267 TGAGAACAGAGGACATGTGGT 58.671 47.619 1.15 0.00 0.00 4.16 R
6879 30814 0.036294 GCTCCTACACCACTTCACCC 60.036 60.000 0.00 0.00 0.00 4.61 R
8140 35282 0.037975 GCCAAATGCACCTCAACAGG 60.038 55.000 0.00 0.00 46.87 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 170 9.846248 CTAGGAAAGTTTCATCACCTTTTATTG 57.154 33.333 17.16 0.00 0.00 1.90
270 298 8.413229 AGTTAGAACAAATGCACACTAAAACAT 58.587 29.630 0.00 0.00 0.00 2.71
332 360 0.250727 CCACCACCCGATGTTTCAGT 60.251 55.000 0.00 0.00 0.00 3.41
396 424 1.201429 AGGAAAGAGCATGGACCCGT 61.201 55.000 0.00 0.00 0.00 5.28
410 438 2.435586 CCGTGCAAGAGCTCTGGG 60.436 66.667 19.06 14.04 42.74 4.45
423 451 0.179020 CTCTGGGAAGGCACAACACA 60.179 55.000 0.00 0.00 0.00 3.72
768 805 2.966516 GTTGGGGGTATTTTGGTCACAA 59.033 45.455 0.00 0.00 34.07 3.33
923 960 2.571202 GGCAAATCCTCAAATTCCCCAA 59.429 45.455 0.00 0.00 0.00 4.12
924 961 3.008923 GGCAAATCCTCAAATTCCCCAAA 59.991 43.478 0.00 0.00 0.00 3.28
925 962 4.506448 GGCAAATCCTCAAATTCCCCAAAA 60.506 41.667 0.00 0.00 0.00 2.44
926 963 5.069318 GCAAATCCTCAAATTCCCCAAAAA 58.931 37.500 0.00 0.00 0.00 1.94
1099 1136 0.462047 CGATGGGTAACTCACAGGCC 60.462 60.000 0.00 0.00 30.72 5.19
1107 1144 0.474660 AACTCACAGGCCTCTCCCTT 60.475 55.000 0.00 0.00 31.24 3.95
1369 1406 0.603707 TTTCCTTGTGAGCTCGCAGG 60.604 55.000 27.41 27.41 37.69 4.85
1547 1584 2.372172 AGTCACCTTCGAGGGTTTGATT 59.628 45.455 17.88 6.43 40.58 2.57
1548 1585 3.581332 AGTCACCTTCGAGGGTTTGATTA 59.419 43.478 17.88 0.00 40.58 1.75
1551 1588 4.224147 TCACCTTCGAGGGTTTGATTATCA 59.776 41.667 17.88 0.00 40.58 2.15
1560 1597 6.373216 CGAGGGTTTGATTATCACCAAAGTTA 59.627 38.462 0.00 0.00 33.52 2.24
1582 1619 0.834687 ACCCTTGTCCTACCGCTTGA 60.835 55.000 0.00 0.00 0.00 3.02
1590 1627 3.512329 TGTCCTACCGCTTGATTCAGTTA 59.488 43.478 0.00 0.00 0.00 2.24
1592 1629 2.866762 CCTACCGCTTGATTCAGTTAGC 59.133 50.000 0.00 0.00 0.00 3.09
1594 1631 2.622436 ACCGCTTGATTCAGTTAGCTC 58.378 47.619 7.13 0.00 0.00 4.09
1620 1657 4.801330 CCTTTTGGGATTCCTGGTTAAC 57.199 45.455 2.01 0.00 37.23 2.01
1633 1670 4.586841 TCCTGGTTAACTGGACAAATTTGG 59.413 41.667 21.74 6.85 41.70 3.28
1639 1676 6.014925 GGTTAACTGGACAAATTTGGTGGTAT 60.015 38.462 21.74 6.99 0.00 2.73
1654 1691 3.438360 GTGGTATTAGTGCTGCATTTGC 58.562 45.455 5.27 0.00 42.50 3.68
1689 1732 8.758829 ACAAGTTAAAAGAAAAGGGAGAAATGT 58.241 29.630 0.00 0.00 0.00 2.71
1821 1864 9.533253 GATTGCTATTGGTACTTTTTATTGCAT 57.467 29.630 0.00 0.00 29.76 3.96
1856 1899 4.905429 TGGATACATGTGCACACTACTTT 58.095 39.130 24.37 1.16 46.17 2.66
1926 1971 7.196331 ACAGTTTTATTGTTCTTCAGTTGCTC 58.804 34.615 0.00 0.00 0.00 4.26
2020 2065 3.959495 AGGGAATGCCATATGTCTTGT 57.041 42.857 1.24 0.00 35.15 3.16
2058 2103 9.716507 CCTTTATGTTCTGTTGTTTAATATCCG 57.283 33.333 0.00 0.00 0.00 4.18
2328 2373 7.316393 TGTCCCTAGATATTTGTATTCAGGG 57.684 40.000 0.00 0.00 42.46 4.45
2497 2545 4.472833 AGGTCTGATCTGGAAGCTGTATTT 59.527 41.667 0.00 0.00 0.00 1.40
2499 2547 5.181748 GTCTGATCTGGAAGCTGTATTTGT 58.818 41.667 0.00 0.00 0.00 2.83
2551 2599 3.532641 AATGAAGCCAAGGAAGGTTCT 57.467 42.857 4.58 0.00 41.27 3.01
2669 2717 3.153369 ACTGGTGTATTGTCATGCCAA 57.847 42.857 0.00 0.00 0.00 4.52
2670 2718 3.495331 ACTGGTGTATTGTCATGCCAAA 58.505 40.909 0.00 0.00 0.00 3.28
2743 2791 1.826720 TGCCATTCTGCAGATTTTCCC 59.173 47.619 19.04 5.06 36.04 3.97
2796 2845 4.193826 TGACAGAAGTGTGCTCCTATTC 57.806 45.455 0.00 0.00 36.88 1.75
2886 2943 4.882447 CAGTATAACTGGCGTTTTCTTCG 58.118 43.478 0.00 0.00 42.35 3.79
3175 3273 6.456501 ACAATCTTGAGGTACTACTGTTGTC 58.543 40.000 0.00 0.00 41.55 3.18
3176 3274 6.041637 ACAATCTTGAGGTACTACTGTTGTCA 59.958 38.462 0.00 0.00 41.55 3.58
3177 3275 5.707242 TCTTGAGGTACTACTGTTGTCAG 57.293 43.478 0.00 0.00 41.55 3.51
3253 3351 3.058160 CCCACGGCCAAGCAAGAG 61.058 66.667 2.24 0.00 0.00 2.85
3254 3352 3.058160 CCACGGCCAAGCAAGAGG 61.058 66.667 2.24 0.00 0.00 3.69
3255 3353 3.058160 CACGGCCAAGCAAGAGGG 61.058 66.667 2.24 0.00 0.00 4.30
3256 3354 3.249189 ACGGCCAAGCAAGAGGGA 61.249 61.111 2.24 0.00 0.00 4.20
3257 3355 2.034066 CGGCCAAGCAAGAGGGAA 59.966 61.111 2.24 0.00 0.00 3.97
3258 3356 2.042831 CGGCCAAGCAAGAGGGAAG 61.043 63.158 2.24 0.00 0.00 3.46
3259 3357 1.680314 GGCCAAGCAAGAGGGAAGG 60.680 63.158 0.00 0.00 0.00 3.46
3260 3358 1.680314 GCCAAGCAAGAGGGAAGGG 60.680 63.158 0.00 0.00 0.00 3.95
3261 3359 2.078452 CCAAGCAAGAGGGAAGGGA 58.922 57.895 0.00 0.00 0.00 4.20
3262 3360 0.627986 CCAAGCAAGAGGGAAGGGAT 59.372 55.000 0.00 0.00 0.00 3.85
3263 3361 1.006400 CCAAGCAAGAGGGAAGGGATT 59.994 52.381 0.00 0.00 0.00 3.01
3264 3362 2.558350 CCAAGCAAGAGGGAAGGGATTT 60.558 50.000 0.00 0.00 0.00 2.17
3265 3363 2.757314 CAAGCAAGAGGGAAGGGATTTC 59.243 50.000 0.00 0.00 34.93 2.17
3280 3378 6.782082 AGGGATTTCCTTCTTAATTCTTGC 57.218 37.500 0.00 0.00 45.47 4.01
3281 3379 6.497640 AGGGATTTCCTTCTTAATTCTTGCT 58.502 36.000 0.00 0.00 45.47 3.91
3282 3380 6.956435 AGGGATTTCCTTCTTAATTCTTGCTT 59.044 34.615 0.00 0.00 45.47 3.91
3283 3381 7.038048 GGGATTTCCTTCTTAATTCTTGCTTG 58.962 38.462 0.00 0.00 35.95 4.01
3284 3382 7.093771 GGGATTTCCTTCTTAATTCTTGCTTGA 60.094 37.037 0.00 0.00 35.95 3.02
3285 3383 8.473219 GGATTTCCTTCTTAATTCTTGCTTGAT 58.527 33.333 0.00 0.00 0.00 2.57
3286 3384 9.866798 GATTTCCTTCTTAATTCTTGCTTGATT 57.133 29.630 0.00 0.00 0.00 2.57
3289 3387 9.739276 TTCCTTCTTAATTCTTGCTTGATTAGA 57.261 29.630 0.00 0.00 0.00 2.10
3290 3388 9.911788 TCCTTCTTAATTCTTGCTTGATTAGAT 57.088 29.630 0.00 0.00 0.00 1.98
3300 3398 9.842775 TTCTTGCTTGATTAGATTGATACATCT 57.157 29.630 0.00 0.00 0.00 2.90
3301 3399 9.486497 TCTTGCTTGATTAGATTGATACATCTC 57.514 33.333 0.00 0.00 0.00 2.75
3302 3400 8.613060 TTGCTTGATTAGATTGATACATCTCC 57.387 34.615 0.00 0.00 0.00 3.71
3303 3401 7.971201 TGCTTGATTAGATTGATACATCTCCT 58.029 34.615 0.00 0.00 0.00 3.69
3304 3402 8.093307 TGCTTGATTAGATTGATACATCTCCTC 58.907 37.037 0.00 0.00 0.00 3.71
3305 3403 8.313292 GCTTGATTAGATTGATACATCTCCTCT 58.687 37.037 0.00 0.00 0.00 3.69
3306 3404 9.859427 CTTGATTAGATTGATACATCTCCTCTC 57.141 37.037 0.00 0.00 0.00 3.20
3307 3405 9.599056 TTGATTAGATTGATACATCTCCTCTCT 57.401 33.333 0.00 0.00 0.00 3.10
3308 3406 9.599056 TGATTAGATTGATACATCTCCTCTCTT 57.401 33.333 0.00 0.00 0.00 2.85
3335 3433 6.697641 ATAAAGAGGTTTACTTGACTCCCA 57.302 37.500 0.00 0.00 30.79 4.37
3336 3434 5.382664 AAAGAGGTTTACTTGACTCCCAA 57.617 39.130 0.00 0.00 0.00 4.12
3343 3441 2.261215 CTTGACTCCCAAGCAAGGC 58.739 57.895 0.00 0.00 44.90 4.35
3344 3442 0.251077 CTTGACTCCCAAGCAAGGCT 60.251 55.000 0.00 0.00 44.90 4.58
3360 3458 1.560146 AGGCTTACTTGACCCCTAAGC 59.440 52.381 0.00 0.00 41.07 3.09
3361 3459 1.280998 GGCTTACTTGACCCCTAAGCA 59.719 52.381 10.04 0.00 42.79 3.91
3362 3460 2.290705 GGCTTACTTGACCCCTAAGCAA 60.291 50.000 10.04 0.00 42.79 3.91
3363 3461 2.747989 GCTTACTTGACCCCTAAGCAAC 59.252 50.000 4.20 0.00 41.32 4.17
3364 3462 3.344515 CTTACTTGACCCCTAAGCAACC 58.655 50.000 0.00 0.00 0.00 3.77
3365 3463 0.036306 ACTTGACCCCTAAGCAACCG 59.964 55.000 0.00 0.00 0.00 4.44
3366 3464 0.323629 CTTGACCCCTAAGCAACCGA 59.676 55.000 0.00 0.00 0.00 4.69
3367 3465 0.035739 TTGACCCCTAAGCAACCGAC 59.964 55.000 0.00 0.00 0.00 4.79
3368 3466 1.078637 GACCCCTAAGCAACCGACC 60.079 63.158 0.00 0.00 0.00 4.79
3369 3467 2.271173 CCCCTAAGCAACCGACCC 59.729 66.667 0.00 0.00 0.00 4.46
3370 3468 2.298661 CCCCTAAGCAACCGACCCT 61.299 63.158 0.00 0.00 0.00 4.34
3371 3469 1.683441 CCCTAAGCAACCGACCCTT 59.317 57.895 0.00 0.00 0.00 3.95
3372 3470 0.906775 CCCTAAGCAACCGACCCTTA 59.093 55.000 0.00 0.00 0.00 2.69
3373 3471 1.489230 CCCTAAGCAACCGACCCTTAT 59.511 52.381 0.00 0.00 0.00 1.73
3374 3472 2.484947 CCCTAAGCAACCGACCCTTATC 60.485 54.545 0.00 0.00 0.00 1.75
3375 3473 2.434702 CCTAAGCAACCGACCCTTATCT 59.565 50.000 0.00 0.00 0.00 1.98
3376 3474 2.693267 AAGCAACCGACCCTTATCTC 57.307 50.000 0.00 0.00 0.00 2.75
3377 3475 1.867363 AGCAACCGACCCTTATCTCT 58.133 50.000 0.00 0.00 0.00 3.10
3378 3476 3.028094 AGCAACCGACCCTTATCTCTA 57.972 47.619 0.00 0.00 0.00 2.43
3379 3477 3.371965 AGCAACCGACCCTTATCTCTAA 58.628 45.455 0.00 0.00 0.00 2.10
3380 3478 3.967987 AGCAACCGACCCTTATCTCTAAT 59.032 43.478 0.00 0.00 0.00 1.73
3381 3479 4.409247 AGCAACCGACCCTTATCTCTAATT 59.591 41.667 0.00 0.00 0.00 1.40
3382 3480 5.601313 AGCAACCGACCCTTATCTCTAATTA 59.399 40.000 0.00 0.00 0.00 1.40
3383 3481 6.099269 AGCAACCGACCCTTATCTCTAATTAA 59.901 38.462 0.00 0.00 0.00 1.40
3384 3482 6.202379 GCAACCGACCCTTATCTCTAATTAAC 59.798 42.308 0.00 0.00 0.00 2.01
3385 3483 6.416631 ACCGACCCTTATCTCTAATTAACC 57.583 41.667 0.00 0.00 0.00 2.85
3386 3484 5.306419 ACCGACCCTTATCTCTAATTAACCC 59.694 44.000 0.00 0.00 0.00 4.11
3387 3485 5.543020 CCGACCCTTATCTCTAATTAACCCT 59.457 44.000 0.00 0.00 0.00 4.34
3388 3486 6.723052 CCGACCCTTATCTCTAATTAACCCTA 59.277 42.308 0.00 0.00 0.00 3.53
3389 3487 7.234166 CCGACCCTTATCTCTAATTAACCCTAA 59.766 40.741 0.00 0.00 0.00 2.69
3390 3488 8.305317 CGACCCTTATCTCTAATTAACCCTAAG 58.695 40.741 0.00 0.00 0.00 2.18
3391 3489 9.377238 GACCCTTATCTCTAATTAACCCTAAGA 57.623 37.037 0.00 0.00 0.00 2.10
3392 3490 9.156940 ACCCTTATCTCTAATTAACCCTAAGAC 57.843 37.037 0.00 0.00 0.00 3.01
3393 3491 9.382307 CCCTTATCTCTAATTAACCCTAAGACT 57.618 37.037 0.00 0.00 0.00 3.24
3399 3497 9.155785 TCTCTAATTAACCCTAAGACTAATGGG 57.844 37.037 0.00 0.00 44.89 4.00
3400 3498 7.742767 TCTAATTAACCCTAAGACTAATGGGC 58.257 38.462 7.12 0.00 43.25 5.36
3401 3499 4.783560 TTAACCCTAAGACTAATGGGCC 57.216 45.455 0.00 0.00 43.25 5.80
3402 3500 1.519498 ACCCTAAGACTAATGGGCCC 58.481 55.000 17.59 17.59 43.25 5.80
3403 3501 1.274767 ACCCTAAGACTAATGGGCCCA 60.275 52.381 30.92 30.92 43.25 5.36
3404 3502 2.065799 CCCTAAGACTAATGGGCCCAT 58.934 52.381 32.75 32.75 38.46 4.00
3405 3503 2.447047 CCCTAAGACTAATGGGCCCATT 59.553 50.000 43.64 43.64 46.85 3.16
3406 3504 3.655777 CCCTAAGACTAATGGGCCCATTA 59.344 47.826 41.63 41.63 43.92 1.90
3420 3518 2.774687 CCCATTAGGCCCATTACGTAC 58.225 52.381 0.00 0.00 0.00 3.67
3421 3519 2.370849 CCCATTAGGCCCATTACGTACT 59.629 50.000 0.00 0.00 0.00 2.73
3422 3520 3.556423 CCCATTAGGCCCATTACGTACTC 60.556 52.174 0.00 0.00 0.00 2.59
3423 3521 3.323979 CCATTAGGCCCATTACGTACTCT 59.676 47.826 0.00 0.00 0.00 3.24
3424 3522 4.525487 CCATTAGGCCCATTACGTACTCTA 59.475 45.833 0.00 0.00 0.00 2.43
3425 3523 5.011329 CCATTAGGCCCATTACGTACTCTAA 59.989 44.000 0.00 0.00 0.00 2.10
3426 3524 5.520376 TTAGGCCCATTACGTACTCTAAC 57.480 43.478 0.00 0.00 0.00 2.34
3427 3525 3.368248 AGGCCCATTACGTACTCTAACA 58.632 45.455 0.00 0.00 0.00 2.41
3428 3526 3.131755 AGGCCCATTACGTACTCTAACAC 59.868 47.826 0.00 0.00 0.00 3.32
3429 3527 3.131755 GGCCCATTACGTACTCTAACACT 59.868 47.826 0.00 0.00 0.00 3.55
3430 3528 4.382362 GGCCCATTACGTACTCTAACACTT 60.382 45.833 0.00 0.00 0.00 3.16
3431 3529 4.565564 GCCCATTACGTACTCTAACACTTG 59.434 45.833 0.00 0.00 0.00 3.16
3432 3530 5.717119 CCCATTACGTACTCTAACACTTGT 58.283 41.667 0.00 0.00 0.00 3.16
3433 3531 6.161381 CCCATTACGTACTCTAACACTTGTT 58.839 40.000 0.00 0.00 41.73 2.83
3434 3532 7.315142 CCCATTACGTACTCTAACACTTGTTA 58.685 38.462 0.00 1.97 39.31 2.41
3435 3533 7.977853 CCCATTACGTACTCTAACACTTGTTAT 59.022 37.037 0.00 0.00 39.49 1.89
3436 3534 8.804743 CCATTACGTACTCTAACACTTGTTATG 58.195 37.037 0.00 2.48 39.49 1.90
3437 3535 8.804743 CATTACGTACTCTAACACTTGTTATGG 58.195 37.037 0.00 2.19 39.49 2.74
3438 3536 5.166398 ACGTACTCTAACACTTGTTATGGC 58.834 41.667 2.33 0.00 39.49 4.40
3439 3537 4.264614 CGTACTCTAACACTTGTTATGGCG 59.735 45.833 2.33 5.29 39.49 5.69
3440 3538 3.000727 ACTCTAACACTTGTTATGGCGC 58.999 45.455 0.00 0.00 39.49 6.53
3441 3539 3.262420 CTCTAACACTTGTTATGGCGCT 58.738 45.455 7.64 0.00 39.49 5.92
3442 3540 3.000041 TCTAACACTTGTTATGGCGCTG 59.000 45.455 7.64 0.00 39.49 5.18
3443 3541 0.240945 AACACTTGTTATGGCGCTGC 59.759 50.000 7.64 0.00 36.32 5.25
3444 3542 0.606401 ACACTTGTTATGGCGCTGCT 60.606 50.000 7.64 0.00 0.00 4.24
3445 3543 1.338674 ACACTTGTTATGGCGCTGCTA 60.339 47.619 7.64 0.00 0.00 3.49
3446 3544 1.328680 CACTTGTTATGGCGCTGCTAG 59.671 52.381 7.64 2.58 0.00 3.42
3447 3545 1.207089 ACTTGTTATGGCGCTGCTAGA 59.793 47.619 7.64 0.00 0.00 2.43
3448 3546 2.279741 CTTGTTATGGCGCTGCTAGAA 58.720 47.619 7.64 0.00 0.00 2.10
3449 3547 1.939974 TGTTATGGCGCTGCTAGAAG 58.060 50.000 7.64 0.00 0.00 2.85
3450 3548 1.221414 GTTATGGCGCTGCTAGAAGG 58.779 55.000 7.64 0.00 0.00 3.46
3451 3549 1.119684 TTATGGCGCTGCTAGAAGGA 58.880 50.000 7.64 0.00 0.00 3.36
3452 3550 0.676184 TATGGCGCTGCTAGAAGGAG 59.324 55.000 7.64 0.00 36.68 3.69
3453 3551 2.037620 ATGGCGCTGCTAGAAGGAGG 62.038 60.000 7.64 0.00 33.92 4.30
3454 3552 2.107953 GCGCTGCTAGAAGGAGGG 59.892 66.667 0.00 7.93 46.69 4.30
3455 3553 2.107953 CGCTGCTAGAAGGAGGGC 59.892 66.667 0.00 0.00 39.48 5.19
3456 3554 2.107953 GCTGCTAGAAGGAGGGCG 59.892 66.667 0.00 0.00 33.92 6.13
3457 3555 2.107953 CTGCTAGAAGGAGGGCGC 59.892 66.667 0.00 0.00 29.18 6.53
3458 3556 3.781770 CTGCTAGAAGGAGGGCGCG 62.782 68.421 0.00 0.00 29.18 6.86
3459 3557 3.528370 GCTAGAAGGAGGGCGCGA 61.528 66.667 12.10 0.00 0.00 5.87
3460 3558 2.725008 CTAGAAGGAGGGCGCGAG 59.275 66.667 12.10 0.00 0.00 5.03
3461 3559 2.833582 TAGAAGGAGGGCGCGAGG 60.834 66.667 12.10 0.00 0.00 4.63
3530 3628 8.093307 TGCTTGATTAGATTGATACATCTCCTC 58.907 37.037 0.00 0.00 0.00 3.71
3664 3762 3.119708 CGTACTCTAACACTACACCCCAC 60.120 52.174 0.00 0.00 0.00 4.61
3677 3775 2.759114 CCCACCTGGACATGCAGT 59.241 61.111 0.00 0.00 37.39 4.40
3678 3776 1.075482 CCCACCTGGACATGCAGTT 59.925 57.895 0.00 0.00 37.39 3.16
3694 3792 0.320247 AGTTTGTCCTCGAGCTGCAG 60.320 55.000 10.11 10.11 0.00 4.41
3787 3885 7.606456 TCTCGGCTTGTTTTATTATTCTCAACT 59.394 33.333 0.00 0.00 0.00 3.16
3800 3898 5.972107 ATTCTCAACTTGAAATGGACTGG 57.028 39.130 0.00 0.00 0.00 4.00
3817 3915 2.817844 ACTGGGACGCTTTATTTTGGAC 59.182 45.455 0.00 0.00 0.00 4.02
3850 3948 2.813908 GGACACCATCCGCACGTC 60.814 66.667 0.00 0.00 37.88 4.34
3876 3974 1.667830 CACGTGTACAGCCACCTGG 60.668 63.158 7.58 0.00 43.53 4.45
3919 4017 4.397420 ACAAAAGGAGTGCATGTGTATGA 58.603 39.130 0.00 0.00 36.36 2.15
3926 4024 2.040278 AGTGCATGTGTATGACCACCTT 59.960 45.455 0.00 0.00 36.36 3.50
4035 4133 1.136329 ACACCATGCCTTCTCCCTGT 61.136 55.000 0.00 0.00 0.00 4.00
4037 4135 1.153289 CCATGCCTTCTCCCTGTCG 60.153 63.158 0.00 0.00 0.00 4.35
4070 4168 2.743928 GCACCGCACAGGGAAGAG 60.744 66.667 0.00 0.00 46.96 2.85
4071 4169 2.743718 CACCGCACAGGGAAGAGT 59.256 61.111 0.00 0.00 46.96 3.24
4130 4233 4.444838 CCCAACCGCCGATGTCGA 62.445 66.667 3.62 0.00 43.02 4.20
4166 4269 3.146913 CCGCGGGGAAAATGGCAT 61.147 61.111 20.10 0.00 34.06 4.40
4167 4270 2.104729 CGCGGGGAAAATGGCATG 59.895 61.111 0.00 0.00 0.00 4.06
4168 4271 2.202919 GCGGGGAAAATGGCATGC 60.203 61.111 9.90 9.90 0.00 4.06
4169 4272 2.500646 CGGGGAAAATGGCATGCC 59.499 61.111 30.54 30.54 0.00 4.40
4170 4273 2.910360 GGGGAAAATGGCATGCCC 59.090 61.111 33.44 17.44 40.22 5.36
4171 4274 2.500646 GGGAAAATGGCATGCCCG 59.499 61.111 33.44 0.00 35.87 6.13
4172 4275 2.202919 GGAAAATGGCATGCCCGC 60.203 61.111 33.44 17.03 35.87 6.13
4193 4296 4.792066 CCATGGGGGAAACTGCAT 57.208 55.556 2.85 0.00 40.01 3.96
4194 4297 2.204748 CCATGGGGGAAACTGCATG 58.795 57.895 2.85 0.00 40.01 4.06
4195 4298 1.518774 CATGGGGGAAACTGCATGC 59.481 57.895 11.82 11.82 0.00 4.06
4196 4299 1.686800 ATGGGGGAAACTGCATGCC 60.687 57.895 16.68 0.00 0.00 4.40
4198 4301 2.283821 GGGGAAACTGCATGCCCA 60.284 61.111 16.68 0.00 46.98 5.36
4199 4302 1.912763 GGGGAAACTGCATGCCCAA 60.913 57.895 16.68 0.00 46.98 4.12
4200 4303 1.593265 GGGAAACTGCATGCCCAAG 59.407 57.895 16.68 8.71 40.39 3.61
4201 4304 0.899717 GGGAAACTGCATGCCCAAGA 60.900 55.000 16.68 0.00 40.39 3.02
4202 4305 1.188863 GGAAACTGCATGCCCAAGAT 58.811 50.000 16.68 0.00 0.00 2.40
4203 4306 1.135721 GGAAACTGCATGCCCAAGATC 59.864 52.381 16.68 9.76 0.00 2.75
4204 4307 1.135721 GAAACTGCATGCCCAAGATCC 59.864 52.381 16.68 0.00 0.00 3.36
4205 4308 0.685458 AACTGCATGCCCAAGATCCC 60.685 55.000 16.68 0.00 0.00 3.85
4206 4309 1.229359 CTGCATGCCCAAGATCCCT 59.771 57.895 16.68 0.00 0.00 4.20
4207 4310 1.076559 TGCATGCCCAAGATCCCTG 60.077 57.895 16.68 0.00 0.00 4.45
4208 4311 1.228228 GCATGCCCAAGATCCCTGA 59.772 57.895 6.36 0.00 0.00 3.86
4209 4312 0.178970 GCATGCCCAAGATCCCTGAT 60.179 55.000 6.36 0.00 0.00 2.90
4210 4313 1.617322 CATGCCCAAGATCCCTGATG 58.383 55.000 0.00 0.00 0.00 3.07
4211 4314 0.178970 ATGCCCAAGATCCCTGATGC 60.179 55.000 0.00 0.00 0.00 3.91
4212 4315 1.228228 GCCCAAGATCCCTGATGCA 59.772 57.895 0.00 0.00 0.00 3.96
4213 4316 0.822532 GCCCAAGATCCCTGATGCAG 60.823 60.000 0.00 0.00 0.00 4.41
4214 4317 0.822532 CCCAAGATCCCTGATGCAGC 60.823 60.000 0.00 0.00 0.00 5.25
4215 4318 1.164662 CCAAGATCCCTGATGCAGCG 61.165 60.000 0.00 0.00 0.00 5.18
4216 4319 1.147824 AAGATCCCTGATGCAGCGG 59.852 57.895 3.08 3.08 0.00 5.52
4217 4320 1.340399 AAGATCCCTGATGCAGCGGA 61.340 55.000 13.56 6.71 36.08 5.54
4218 4321 1.126329 AGATCCCTGATGCAGCGGAT 61.126 55.000 13.56 11.91 41.08 4.18
4219 4322 0.954449 GATCCCTGATGCAGCGGATG 60.954 60.000 13.56 2.96 39.68 3.51
4220 4323 1.413256 ATCCCTGATGCAGCGGATGA 61.413 55.000 13.56 8.90 38.85 2.92
4221 4324 1.597302 CCCTGATGCAGCGGATGAG 60.597 63.158 13.56 0.00 0.00 2.90
4222 4325 1.444672 CCTGATGCAGCGGATGAGA 59.555 57.895 13.56 0.00 0.00 3.27
4223 4326 0.035036 CCTGATGCAGCGGATGAGAT 59.965 55.000 13.56 0.00 0.00 2.75
4224 4327 1.430479 CTGATGCAGCGGATGAGATC 58.570 55.000 4.30 0.00 0.00 2.75
4225 4328 0.319297 TGATGCAGCGGATGAGATCG 60.319 55.000 0.00 0.00 0.00 3.69
4226 4329 0.038801 GATGCAGCGGATGAGATCGA 60.039 55.000 0.00 0.00 0.00 3.59
4227 4330 0.038435 ATGCAGCGGATGAGATCGAG 60.038 55.000 0.00 0.00 0.00 4.04
4228 4331 1.372748 GCAGCGGATGAGATCGAGG 60.373 63.158 0.00 0.00 0.00 4.63
4229 4332 2.037053 CAGCGGATGAGATCGAGGT 58.963 57.895 0.00 0.00 0.00 3.85
4230 4333 0.039617 CAGCGGATGAGATCGAGGTC 60.040 60.000 0.00 0.00 0.00 3.85
4231 4334 1.175983 AGCGGATGAGATCGAGGTCC 61.176 60.000 0.00 0.00 0.00 4.46
4232 4335 1.175983 GCGGATGAGATCGAGGTCCT 61.176 60.000 0.00 0.00 0.00 3.85
4233 4336 1.323412 CGGATGAGATCGAGGTCCTT 58.677 55.000 0.00 0.00 0.00 3.36
4234 4337 1.683917 CGGATGAGATCGAGGTCCTTT 59.316 52.381 0.00 0.00 0.00 3.11
4235 4338 2.544694 CGGATGAGATCGAGGTCCTTTG 60.545 54.545 0.00 0.00 0.00 2.77
4236 4339 2.432510 GGATGAGATCGAGGTCCTTTGT 59.567 50.000 0.00 0.00 0.00 2.83
4237 4340 3.452474 GATGAGATCGAGGTCCTTTGTG 58.548 50.000 0.00 0.00 0.00 3.33
4238 4341 1.066858 TGAGATCGAGGTCCTTTGTGC 60.067 52.381 0.00 0.00 0.00 4.57
4239 4342 0.976641 AGATCGAGGTCCTTTGTGCA 59.023 50.000 0.00 0.00 0.00 4.57
4240 4343 1.066573 AGATCGAGGTCCTTTGTGCAG 60.067 52.381 0.00 0.00 0.00 4.41
4241 4344 0.674895 ATCGAGGTCCTTTGTGCAGC 60.675 55.000 0.00 0.00 0.00 5.25
4242 4345 2.671177 CGAGGTCCTTTGTGCAGCG 61.671 63.158 0.00 0.00 0.00 5.18
4243 4346 1.301716 GAGGTCCTTTGTGCAGCGA 60.302 57.895 0.00 0.00 0.00 4.93
4244 4347 0.884704 GAGGTCCTTTGTGCAGCGAA 60.885 55.000 0.00 0.00 0.00 4.70
4245 4348 0.886490 AGGTCCTTTGTGCAGCGAAG 60.886 55.000 0.00 0.00 38.14 3.79
4248 4351 2.256461 CTTTGTGCAGCGAAGGGC 59.744 61.111 0.00 0.00 44.05 5.19
4257 4360 3.267974 GCGAAGGGCAACTTGGAG 58.732 61.111 6.59 0.00 40.21 3.86
4258 4361 2.335712 GCGAAGGGCAACTTGGAGG 61.336 63.158 6.59 0.00 40.21 4.30
4259 4362 1.374947 CGAAGGGCAACTTGGAGGA 59.625 57.895 0.00 0.00 40.21 3.71
4260 4363 0.674895 CGAAGGGCAACTTGGAGGAG 60.675 60.000 0.00 0.00 40.21 3.69
4261 4364 0.962855 GAAGGGCAACTTGGAGGAGC 60.963 60.000 0.00 0.00 40.21 4.70
4262 4365 2.747855 GGGCAACTTGGAGGAGCG 60.748 66.667 0.00 0.00 0.00 5.03
4263 4366 2.747855 GGCAACTTGGAGGAGCGG 60.748 66.667 0.00 0.00 0.00 5.52
4264 4367 3.435186 GCAACTTGGAGGAGCGGC 61.435 66.667 0.00 0.00 0.00 6.53
4265 4368 2.032528 CAACTTGGAGGAGCGGCA 59.967 61.111 1.45 0.00 0.00 5.69
4266 4369 1.600636 CAACTTGGAGGAGCGGCAA 60.601 57.895 1.45 0.00 0.00 4.52
4267 4370 1.600916 AACTTGGAGGAGCGGCAAC 60.601 57.895 1.45 0.00 0.00 4.17
4268 4371 2.056906 AACTTGGAGGAGCGGCAACT 62.057 55.000 1.45 0.00 0.00 3.16
4269 4372 2.032528 TTGGAGGAGCGGCAACTG 59.967 61.111 1.45 0.00 0.00 3.16
4270 4373 4.704833 TGGAGGAGCGGCAACTGC 62.705 66.667 1.45 5.61 41.14 4.40
4271 4374 4.704833 GGAGGAGCGGCAACTGCA 62.705 66.667 1.45 0.00 44.36 4.41
4272 4375 3.123620 GAGGAGCGGCAACTGCAG 61.124 66.667 13.48 13.48 44.36 4.41
4273 4376 3.596066 GAGGAGCGGCAACTGCAGA 62.596 63.158 23.35 0.00 44.36 4.26
4274 4377 3.426568 GGAGCGGCAACTGCAGAC 61.427 66.667 23.35 9.20 44.36 3.51
4275 4378 3.426568 GAGCGGCAACTGCAGACC 61.427 66.667 23.35 17.11 44.36 3.85
4276 4379 4.254709 AGCGGCAACTGCAGACCA 62.255 61.111 23.35 0.00 44.36 4.02
4277 4380 4.030452 GCGGCAACTGCAGACCAC 62.030 66.667 23.35 9.01 44.36 4.16
4278 4381 3.716006 CGGCAACTGCAGACCACG 61.716 66.667 23.35 15.25 44.36 4.94
4279 4382 4.030452 GGCAACTGCAGACCACGC 62.030 66.667 23.35 14.09 44.36 5.34
4280 4383 3.279116 GCAACTGCAGACCACGCA 61.279 61.111 23.35 0.00 41.59 5.24
4281 4384 2.620112 GCAACTGCAGACCACGCAT 61.620 57.895 23.35 0.00 39.02 4.73
4282 4385 1.499056 CAACTGCAGACCACGCATC 59.501 57.895 23.35 0.00 39.02 3.91
4283 4386 0.952497 CAACTGCAGACCACGCATCT 60.952 55.000 23.35 0.00 39.02 2.90
4284 4387 0.671781 AACTGCAGACCACGCATCTC 60.672 55.000 23.35 0.00 39.02 2.75
4285 4388 1.812922 CTGCAGACCACGCATCTCC 60.813 63.158 8.42 0.00 39.02 3.71
4286 4389 2.512515 GCAGACCACGCATCTCCC 60.513 66.667 0.00 0.00 0.00 4.30
4287 4390 2.202797 CAGACCACGCATCTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
4288 4391 4.148825 AGACCACGCATCTCCCGC 62.149 66.667 0.00 0.00 0.00 6.13
4289 4392 4.451150 GACCACGCATCTCCCGCA 62.451 66.667 0.00 0.00 0.00 5.69
4290 4393 4.760047 ACCACGCATCTCCCGCAC 62.760 66.667 0.00 0.00 0.00 5.34
4291 4394 4.758251 CCACGCATCTCCCGCACA 62.758 66.667 0.00 0.00 0.00 4.57
4292 4395 3.490759 CACGCATCTCCCGCACAC 61.491 66.667 0.00 0.00 0.00 3.82
4296 4399 3.190849 CATCTCCCGCACACGCTG 61.191 66.667 0.00 0.00 38.22 5.18
4297 4400 3.381983 ATCTCCCGCACACGCTGA 61.382 61.111 0.00 0.00 38.22 4.26
4298 4401 3.649277 ATCTCCCGCACACGCTGAC 62.649 63.158 0.00 0.00 38.22 3.51
4311 4414 3.826754 CTGACGCGCTAGGAGGCA 61.827 66.667 5.73 0.00 0.00 4.75
4312 4415 3.764810 CTGACGCGCTAGGAGGCAG 62.765 68.421 5.73 2.70 45.46 4.85
4316 4419 3.227276 GCGCTAGGAGGCAGCCTA 61.227 66.667 16.16 0.00 39.50 3.93
4317 4420 2.731374 CGCTAGGAGGCAGCCTAC 59.269 66.667 17.22 17.22 39.50 3.18
4318 4421 2.127869 CGCTAGGAGGCAGCCTACA 61.128 63.158 26.78 10.83 36.80 2.74
4319 4422 1.745264 GCTAGGAGGCAGCCTACAG 59.255 63.158 26.78 20.21 36.80 2.74
4320 4423 1.745264 CTAGGAGGCAGCCTACAGC 59.255 63.158 26.78 7.95 36.80 4.40
4325 4428 2.124942 GGCAGCCTACAGCCTCAC 60.125 66.667 3.29 0.00 44.75 3.51
4326 4429 2.124942 GCAGCCTACAGCCTCACC 60.125 66.667 0.00 0.00 45.47 4.02
4328 4431 3.775654 AGCCTACAGCCTCACCGC 61.776 66.667 0.00 0.00 45.47 5.68
4359 4462 1.591863 GCGGGTAGCGATCCAAGAC 60.592 63.158 0.00 0.00 35.41 3.01
4361 4464 1.067582 GGGTAGCGATCCAAGACGG 59.932 63.158 0.00 0.00 0.00 4.79
4400 4503 1.846124 GGGGGACTGGACTTGGTGA 60.846 63.158 0.00 0.00 0.00 4.02
4401 4504 1.423794 GGGGGACTGGACTTGGTGAA 61.424 60.000 0.00 0.00 0.00 3.18
4403 4506 0.606673 GGGACTGGACTTGGTGAAGC 60.607 60.000 0.00 0.00 31.68 3.86
4405 4508 0.951040 GACTGGACTTGGTGAAGCGG 60.951 60.000 0.00 0.00 31.68 5.52
4406 4509 1.672356 CTGGACTTGGTGAAGCGGG 60.672 63.158 0.00 0.00 31.68 6.13
4407 4510 2.111999 CTGGACTTGGTGAAGCGGGA 62.112 60.000 0.00 0.00 31.68 5.14
4408 4511 1.671379 GGACTTGGTGAAGCGGGAC 60.671 63.158 0.00 0.00 31.68 4.46
4411 4514 1.376037 CTTGGTGAAGCGGGACTCC 60.376 63.158 0.00 0.00 0.00 3.85
4412 4515 1.831652 CTTGGTGAAGCGGGACTCCT 61.832 60.000 0.00 0.00 0.00 3.69
4413 4516 2.111999 TTGGTGAAGCGGGACTCCTG 62.112 60.000 0.00 0.00 0.00 3.86
4439 4542 4.570663 GTCGATGCGGGACCGGAG 62.571 72.222 9.46 0.00 44.01 4.63
4888 11276 1.457831 ATCTCCTCCGGGGTGTAGC 60.458 63.158 0.00 0.00 36.25 3.58
5234 25389 1.153349 CCCTAAGCAAGCGACCCTC 60.153 63.158 0.00 0.00 0.00 4.30
5316 27466 8.371699 AGTTCTAGACTTCTAGCAACAAATCTT 58.628 33.333 19.59 6.08 44.24 2.40
5317 27467 8.439286 GTTCTAGACTTCTAGCAACAAATCTTG 58.561 37.037 8.23 0.00 44.24 3.02
5378 27530 1.736126 CTTGAGCGGACGTACACTAGA 59.264 52.381 0.00 0.00 0.00 2.43
5379 27531 1.812235 TGAGCGGACGTACACTAGAA 58.188 50.000 0.00 0.00 0.00 2.10
5394 27546 6.867662 ACACTAGAATTATATTGCCACTGC 57.132 37.500 0.00 0.00 38.26 4.40
5398 27550 7.443575 CACTAGAATTATATTGCCACTGCTTCT 59.556 37.037 0.00 0.00 38.71 2.85
5400 27552 9.494271 CTAGAATTATATTGCCACTGCTTCTTA 57.506 33.333 0.00 0.00 38.71 2.10
5436 27588 4.516698 TCTGAATCTGAAACTTCTGTTGGC 59.483 41.667 0.00 0.00 36.39 4.52
5493 27645 9.461312 AGGCAAAGTATGTCAATATGTCTTTAA 57.539 29.630 0.00 0.00 35.54 1.52
5520 27672 8.352201 TGACACAATTTAAAGGAATCACTTCAG 58.648 33.333 0.00 0.00 32.70 3.02
5588 27740 2.754552 ACATGTCCGTTTGAATGGGATG 59.245 45.455 0.00 7.46 35.72 3.51
5596 27748 3.554752 CGTTTGAATGGGATGGCAAAAGT 60.555 43.478 0.00 0.00 32.71 2.66
5614 27766 1.065491 AGTGTGCAACTGAGTGAACCA 60.065 47.619 0.00 0.00 37.88 3.67
5647 27799 2.736192 GCAACACATTGTTAACATGGGC 59.264 45.455 9.56 9.45 38.77 5.36
5677 27829 2.171840 TCAGACAGAGGCCTTGTACTC 58.828 52.381 6.77 2.19 0.00 2.59
5678 27830 2.175202 CAGACAGAGGCCTTGTACTCT 58.825 52.381 6.77 4.50 44.50 3.24
5789 27941 2.216898 GCTGCAGATGACCTTGGTATC 58.783 52.381 20.43 0.00 0.00 2.24
5821 27973 9.046296 CGTCTATGGCTTTACTTAAAGATTGAT 57.954 33.333 12.09 1.86 44.07 2.57
5841 27993 2.598565 TCTGTCAGCCTGTACAAGAGT 58.401 47.619 0.00 0.00 0.00 3.24
5863 28015 6.510536 AGTGCCTCTCTCTTTTTGAAATTTG 58.489 36.000 0.00 0.00 0.00 2.32
5890 28042 5.010112 AGACCATATCTCTGTGTATTCGTGG 59.990 44.000 0.00 0.00 28.16 4.94
5923 28075 3.104843 AGCGAGCCTAGAAACATCATC 57.895 47.619 0.00 0.00 0.00 2.92
5945 28097 6.249456 TCCTTATCCCACCCCATATTAGTA 57.751 41.667 0.00 0.00 0.00 1.82
5965 28117 1.334160 ATCTACCACACGTCCACACA 58.666 50.000 0.00 0.00 0.00 3.72
5966 28118 1.334160 TCTACCACACGTCCACACAT 58.666 50.000 0.00 0.00 0.00 3.21
5986 28138 7.760131 CACATTTGTGTGTCATTTTCTTCTT 57.240 32.000 2.48 0.00 40.96 2.52
6002 28154 2.725221 TCTTACCTACTCCCTCCGTC 57.275 55.000 0.00 0.00 0.00 4.79
6003 28155 2.203584 TCTTACCTACTCCCTCCGTCT 58.796 52.381 0.00 0.00 0.00 4.18
6005 28157 1.588239 TACCTACTCCCTCCGTCTCA 58.412 55.000 0.00 0.00 0.00 3.27
6006 28158 0.034283 ACCTACTCCCTCCGTCTCAC 60.034 60.000 0.00 0.00 0.00 3.51
6012 28164 4.180377 ACTCCCTCCGTCTCACAATATA 57.820 45.455 0.00 0.00 0.00 0.86
6013 28165 4.543689 ACTCCCTCCGTCTCACAATATAA 58.456 43.478 0.00 0.00 0.00 0.98
6015 28167 4.800023 TCCCTCCGTCTCACAATATAAGA 58.200 43.478 0.00 0.00 0.00 2.10
6024 28176 7.706454 GTCTCACAATATAAGACGTTTTTGC 57.294 36.000 0.00 0.00 31.01 3.68
6025 28177 7.295201 GTCTCACAATATAAGACGTTTTTGCA 58.705 34.615 0.00 0.00 31.01 4.08
6027 28179 8.015087 TCTCACAATATAAGACGTTTTTGCAAG 58.985 33.333 0.00 0.00 0.00 4.01
6028 28180 6.580791 TCACAATATAAGACGTTTTTGCAAGC 59.419 34.615 0.00 0.00 0.00 4.01
6030 28182 7.748683 CACAATATAAGACGTTTTTGCAAGCTA 59.251 33.333 0.00 0.00 0.00 3.32
6031 28183 8.458843 ACAATATAAGACGTTTTTGCAAGCTAT 58.541 29.630 0.00 0.00 0.00 2.97
6032 28184 9.289303 CAATATAAGACGTTTTTGCAAGCTATT 57.711 29.630 0.00 0.00 0.00 1.73
6116 30046 8.050778 TGATTGTAGAAATACGAAAGCCAATT 57.949 30.769 0.00 0.00 0.00 2.32
6124 30054 8.044908 AGAAATACGAAAGCCAATTCTAACCTA 58.955 33.333 0.00 0.00 0.00 3.08
6196 30126 4.087892 GCAGAGCCGGCTTCCAGA 62.088 66.667 33.34 0.00 0.00 3.86
6366 30296 5.437289 TCAACACTTTCTTAGGCAATGTG 57.563 39.130 0.00 0.00 35.84 3.21
6404 30334 9.079833 GTTGAATATTTTGATGTTCTGGTCATG 57.920 33.333 0.00 0.00 0.00 3.07
6420 30350 2.352960 GTCATGTTCAAGGCTCGATTCC 59.647 50.000 0.00 0.00 0.00 3.01
6442 30372 2.269940 AGGCTAGAAGGGCAAAAGAGA 58.730 47.619 0.00 0.00 0.00 3.10
6508 30439 9.620259 ACAAAGGGCAGAAAATAAATAAAAACA 57.380 25.926 0.00 0.00 0.00 2.83
6600 30531 4.827692 TGATGGCGACTTTTATGTGTAGT 58.172 39.130 0.00 0.00 0.00 2.73
6879 30814 5.702209 TGGATGTATTGTCATTCATCATCCG 59.298 40.000 13.91 0.00 43.40 4.18
6880 30815 5.122869 GGATGTATTGTCATTCATCATCCGG 59.877 44.000 0.00 0.00 38.40 5.14
6881 30816 4.388485 TGTATTGTCATTCATCATCCGGG 58.612 43.478 0.00 0.00 0.00 5.73
6905 30843 4.020928 TGAAGTGGTGTAGGAGCGATTTTA 60.021 41.667 0.00 0.00 0.00 1.52
6981 30919 3.521796 GGCATCGGCTTTGGAGGC 61.522 66.667 0.00 0.00 44.55 4.70
7017 30955 1.684049 CCTCTTCCTCTCTGCGGGT 60.684 63.158 0.00 0.00 0.00 5.28
7137 31075 6.774656 GGATACAAGTGAAGGGATCAAATGAT 59.225 38.462 0.00 0.00 40.50 2.45
7334 31277 4.899352 ATCTGGTTGCTACTCTTGAGTT 57.101 40.909 8.66 0.00 0.00 3.01
7335 31278 4.689612 TCTGGTTGCTACTCTTGAGTTT 57.310 40.909 8.66 0.00 0.00 2.66
7336 31279 5.036117 TCTGGTTGCTACTCTTGAGTTTT 57.964 39.130 8.66 0.00 0.00 2.43
7337 31280 6.169557 TCTGGTTGCTACTCTTGAGTTTTA 57.830 37.500 8.66 0.00 0.00 1.52
7430 31373 2.032620 ACTGTATGGATCCAGGACGTC 58.967 52.381 21.33 7.13 32.90 4.34
7431 31374 2.031870 CTGTATGGATCCAGGACGTCA 58.968 52.381 21.33 10.93 0.00 4.35
7519 31462 4.454678 CTGGCTGCTGATTAAAGGATGTA 58.545 43.478 0.00 0.00 0.00 2.29
7567 34275 2.782925 TGTAGCATGTATTGGGGTGGAT 59.217 45.455 0.00 0.00 0.00 3.41
7624 34332 0.813610 TTGCAGTGACACTTGTCCGG 60.814 55.000 5.04 0.00 44.15 5.14
7706 34418 2.205749 TCCTGTACACAGCCCCCA 59.794 61.111 3.75 0.00 42.47 4.96
7727 34439 4.990426 CCACTTCGGCAATTTTCAGAAAAT 59.010 37.500 14.43 14.43 42.62 1.82
7753 34465 9.442062 TCCCCTGAGTTGTAATAGATTTACATA 57.558 33.333 0.00 0.00 35.15 2.29
7818 34530 3.395941 ACCATCATATTCTCCAGTTCCCC 59.604 47.826 0.00 0.00 0.00 4.81
7835 34547 1.007118 CCCCAACCCTAGCCAAATCTT 59.993 52.381 0.00 0.00 0.00 2.40
7842 34554 5.256806 ACCCTAGCCAAATCTTTAACTGT 57.743 39.130 0.00 0.00 0.00 3.55
7845 34557 5.123979 CCCTAGCCAAATCTTTAACTGTCAC 59.876 44.000 0.00 0.00 0.00 3.67
7847 34559 4.469657 AGCCAAATCTTTAACTGTCACCA 58.530 39.130 0.00 0.00 0.00 4.17
7882 34600 1.606531 CTCTGCCCTGCTAGCCTTT 59.393 57.895 13.29 0.00 0.00 3.11
7901 34619 6.437162 AGCCTTTGTTAGCTTATTCATTTCCA 59.563 34.615 0.00 0.00 35.22 3.53
7934 34652 7.759886 GCTTTTTCCTTAGTTCTTCTTTTGTGT 59.240 33.333 0.00 0.00 0.00 3.72
8009 34727 4.623932 ACAGAGTCATGCTGTTTTCCTA 57.376 40.909 0.00 0.00 43.67 2.94
8011 34729 5.376625 ACAGAGTCATGCTGTTTTCCTAAA 58.623 37.500 0.00 0.00 43.67 1.85
8012 34730 5.827797 ACAGAGTCATGCTGTTTTCCTAAAA 59.172 36.000 0.00 0.00 43.67 1.52
8013 34731 6.491403 ACAGAGTCATGCTGTTTTCCTAAAAT 59.509 34.615 0.00 0.00 43.67 1.82
8017 34735 9.691362 GAGTCATGCTGTTTTCCTAAAATAAAA 57.309 29.630 0.00 0.00 32.22 1.52
8074 35014 2.866028 GCAGGAAGCAGCAAGACG 59.134 61.111 0.00 0.00 44.79 4.18
8076 35016 2.359230 AGGAAGCAGCAAGACGCC 60.359 61.111 0.00 0.00 44.04 5.68
8077 35017 3.793144 GGAAGCAGCAAGACGCCG 61.793 66.667 0.00 0.00 44.04 6.46
8078 35018 3.044305 GAAGCAGCAAGACGCCGT 61.044 61.111 0.00 0.00 44.04 5.68
8079 35019 3.300667 GAAGCAGCAAGACGCCGTG 62.301 63.158 0.00 0.00 44.04 4.94
8082 35022 3.716006 CAGCAAGACGCCGTGGTG 61.716 66.667 0.00 2.31 44.04 4.17
8095 35237 1.376683 GTGGTGCACCCGCTCATTA 60.377 57.895 32.62 8.94 40.81 1.90
8112 35254 1.448922 TTACCTGCAACGTGGCCAAC 61.449 55.000 13.54 0.15 0.00 3.77
8160 35320 4.997890 TCCTGTTGAGGTGCATTTGGCA 62.998 50.000 0.00 0.00 44.19 4.92
8175 35335 5.583061 GCATTTGGCAAAAAGATGATCATGA 59.417 36.000 17.70 0.00 43.97 3.07
8226 35386 8.960075 GGCAAAAATGTTCATTCATTGAAAAAG 58.040 29.630 18.95 0.00 45.71 2.27
8243 35403 8.434733 TTGAAAAAGATGTTCATGCATTTGAA 57.565 26.923 0.00 0.00 35.03 2.69
8246 35406 9.377383 GAAAAAGATGTTCATGCATTTGAAAAG 57.623 29.630 4.34 0.00 37.36 2.27
8247 35407 8.665643 AAAAGATGTTCATGCATTTGAAAAGA 57.334 26.923 4.34 0.00 37.36 2.52
8375 35535 9.866655 AAAGAAATTATGTGGCATAAGGATAGA 57.133 29.630 7.50 0.00 0.00 1.98
8382 35542 4.238514 GTGGCATAAGGATAGAACTAGCG 58.761 47.826 0.00 0.00 0.00 4.26
8421 35581 9.812347 TGGGAATAGATCTTGCATAATTTACAT 57.188 29.630 0.00 0.00 0.00 2.29
8447 35607 7.596248 TGAGTTGTTACTGAAAATAGACCGTAC 59.404 37.037 0.00 0.00 33.84 3.67
8499 35659 5.704515 AGATGCATGTAATCTGATGGTAAGC 59.295 40.000 2.46 0.00 33.08 3.09
8500 35660 5.039920 TGCATGTAATCTGATGGTAAGCT 57.960 39.130 0.00 0.00 0.00 3.74
8514 35674 2.172717 GGTAAGCTAAGGGCATCTCCAA 59.827 50.000 0.00 0.00 44.79 3.53
8517 35677 0.107654 GCTAAGGGCATCTCCAACGT 60.108 55.000 0.00 0.00 41.35 3.99
8519 35679 0.539986 TAAGGGCATCTCCAACGTCC 59.460 55.000 0.00 0.00 36.21 4.79
8566 35726 8.939586 ATTATAAAAGAATCATTGACGCGATG 57.060 30.769 15.93 6.51 0.00 3.84
8580 35740 3.252400 ACGCGATGTCGTAATTTTGGTA 58.748 40.909 15.93 0.00 41.36 3.25
8581 35741 3.305094 ACGCGATGTCGTAATTTTGGTAG 59.695 43.478 15.93 0.00 41.36 3.18
8582 35742 3.305094 CGCGATGTCGTAATTTTGGTAGT 59.695 43.478 0.00 0.00 42.22 2.73
8583 35743 4.574759 GCGATGTCGTAATTTTGGTAGTG 58.425 43.478 4.20 0.00 42.22 2.74
8584 35744 4.493545 GCGATGTCGTAATTTTGGTAGTGG 60.494 45.833 4.20 0.00 42.22 4.00
8585 35745 4.865925 CGATGTCGTAATTTTGGTAGTGGA 59.134 41.667 0.00 0.00 34.11 4.02
8586 35746 5.349270 CGATGTCGTAATTTTGGTAGTGGAA 59.651 40.000 0.00 0.00 34.11 3.53
8587 35747 6.455113 CGATGTCGTAATTTTGGTAGTGGAAG 60.455 42.308 0.00 0.00 34.11 3.46
8588 35748 5.856156 TGTCGTAATTTTGGTAGTGGAAGA 58.144 37.500 0.00 0.00 0.00 2.87
8589 35749 6.469410 TGTCGTAATTTTGGTAGTGGAAGAT 58.531 36.000 0.00 0.00 0.00 2.40
8590 35750 6.592607 TGTCGTAATTTTGGTAGTGGAAGATC 59.407 38.462 0.00 0.00 0.00 2.75
8591 35751 6.036844 GTCGTAATTTTGGTAGTGGAAGATCC 59.963 42.308 0.00 0.00 36.96 3.36
8592 35752 5.006358 CGTAATTTTGGTAGTGGAAGATCCG 59.994 44.000 0.00 0.00 40.17 4.18
8593 35753 4.569719 ATTTTGGTAGTGGAAGATCCGT 57.430 40.909 0.00 0.00 40.17 4.69
8594 35754 3.328382 TTTGGTAGTGGAAGATCCGTG 57.672 47.619 0.00 0.00 40.17 4.94
8595 35755 1.933021 TGGTAGTGGAAGATCCGTGT 58.067 50.000 0.00 0.00 40.17 4.49
8596 35756 1.822990 TGGTAGTGGAAGATCCGTGTC 59.177 52.381 0.00 0.00 40.17 3.67
8597 35757 1.136500 GGTAGTGGAAGATCCGTGTCC 59.864 57.143 0.00 0.00 40.17 4.02
8598 35758 1.136500 GTAGTGGAAGATCCGTGTCCC 59.864 57.143 0.00 0.00 40.17 4.46
8599 35759 0.544357 AGTGGAAGATCCGTGTCCCA 60.544 55.000 0.00 0.00 40.17 4.37
8600 35760 0.323629 GTGGAAGATCCGTGTCCCAA 59.676 55.000 0.00 0.00 40.17 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.880894 CTCCGTACGTTCAGGAGCA 59.119 57.895 15.21 0.00 44.09 4.26
118 146 8.250143 ACAATAAAAGGTGATGAAACTTTCCT 57.750 30.769 0.00 0.00 33.64 3.36
142 170 8.556194 TGAAGTGTGAATGTACTTTGTGATTAC 58.444 33.333 0.00 0.00 37.27 1.89
220 248 5.730550 TGTGAACTAGTAAGGGCTAATGTG 58.269 41.667 0.00 0.00 0.00 3.21
270 298 9.155975 GTTCAGAGAACAAGAAAATATAGCTGA 57.844 33.333 0.00 0.00 0.00 4.26
396 424 1.681666 CCTTCCCAGAGCTCTTGCA 59.318 57.895 15.27 0.00 42.74 4.08
719 753 9.098355 CAATCTGTTTTAGTTATCCTCAATCGA 57.902 33.333 0.00 0.00 0.00 3.59
927 964 2.200899 GGACGCTTTGTGTGCATTTTT 58.799 42.857 0.00 0.00 34.62 1.94
928 965 1.537990 GGGACGCTTTGTGTGCATTTT 60.538 47.619 0.00 0.00 36.14 1.82
929 966 0.031994 GGGACGCTTTGTGTGCATTT 59.968 50.000 0.00 0.00 36.14 2.32
930 967 0.823356 AGGGACGCTTTGTGTGCATT 60.823 50.000 0.00 0.00 36.14 3.56
931 968 0.823356 AAGGGACGCTTTGTGTGCAT 60.823 50.000 0.00 0.00 36.14 3.96
932 969 1.453015 AAGGGACGCTTTGTGTGCA 60.453 52.632 0.00 0.00 36.14 4.57
933 970 1.008538 CAAGGGACGCTTTGTGTGC 60.009 57.895 1.29 0.00 33.75 4.57
934 971 1.101049 ACCAAGGGACGCTTTGTGTG 61.101 55.000 8.02 0.00 0.00 3.82
965 1002 0.460459 TTGGAACGACAACTGCACGA 60.460 50.000 0.24 0.00 0.00 4.35
1079 1116 0.249398 GCCTGTGAGTTACCCATCGT 59.751 55.000 0.00 0.00 0.00 3.73
1099 1136 2.726351 GGAGGCGGACAAGGGAGAG 61.726 68.421 0.00 0.00 0.00 3.20
1386 1423 1.152756 CCACCCGAATCCAATCCCC 60.153 63.158 0.00 0.00 0.00 4.81
1547 1584 6.296030 GGACAAGGGTACTAACTTTGGTGATA 60.296 42.308 1.42 0.00 0.00 2.15
1548 1585 5.514310 GGACAAGGGTACTAACTTTGGTGAT 60.514 44.000 1.42 0.00 0.00 3.06
1551 1588 3.978672 AGGACAAGGGTACTAACTTTGGT 59.021 43.478 1.42 0.00 36.04 3.67
1560 1597 0.040794 AGCGGTAGGACAAGGGTACT 59.959 55.000 0.00 0.00 42.31 2.73
1582 1619 3.983044 AAGGGAACGAGCTAACTGAAT 57.017 42.857 0.00 0.00 0.00 2.57
1590 1627 0.698818 ATCCCAAAAGGGAACGAGCT 59.301 50.000 7.43 0.00 41.79 4.09
1592 1629 2.092323 GGAATCCCAAAAGGGAACGAG 58.908 52.381 7.43 0.00 41.79 4.18
1594 1631 1.818674 CAGGAATCCCAAAAGGGAACG 59.181 52.381 7.43 0.00 41.79 3.95
1607 1644 6.590234 AATTTGTCCAGTTAACCAGGAATC 57.410 37.500 16.50 8.15 32.30 2.52
1609 1646 5.069781 CCAAATTTGTCCAGTTAACCAGGAA 59.930 40.000 16.73 4.92 32.30 3.36
1612 1649 5.288804 CACCAAATTTGTCCAGTTAACCAG 58.711 41.667 16.73 0.00 0.00 4.00
1617 1654 7.945664 ACTAATACCACCAAATTTGTCCAGTTA 59.054 33.333 16.73 7.82 0.00 2.24
1618 1655 6.780522 ACTAATACCACCAAATTTGTCCAGTT 59.219 34.615 16.73 7.16 0.00 3.16
1620 1657 6.620678 CACTAATACCACCAAATTTGTCCAG 58.379 40.000 16.73 4.22 0.00 3.86
1633 1670 3.438360 GCAAATGCAGCACTAATACCAC 58.562 45.455 0.00 0.00 41.59 4.16
1656 1693 8.646900 TCCCTTTTCTTTTAACTTGTATTGCAT 58.353 29.630 0.00 0.00 0.00 3.96
1742 1785 8.621532 ACAAGATAGCAACTTAAAATCAGTCA 57.378 30.769 0.00 0.00 0.00 3.41
1821 1864 5.589855 CACATGTATCCAACCAAGCTAATCA 59.410 40.000 0.00 0.00 0.00 2.57
1843 1886 4.600012 ATGCGATTAAAGTAGTGTGCAC 57.400 40.909 10.75 10.75 33.47 4.57
1856 1899 9.221933 TCTGAAAACTTAAGGTTTATGCGATTA 57.778 29.630 18.31 0.00 46.18 1.75
1968 2013 7.093727 TGGAAGGAAAACTTTGTGTTGAATACA 60.094 33.333 0.00 0.00 40.21 2.29
2051 2096 9.706691 CCTACATGTTACAAAGATACGGATATT 57.293 33.333 2.30 0.00 0.00 1.28
2058 2103 7.372451 TGTTGCCTACATGTTACAAAGATAC 57.628 36.000 2.30 0.00 0.00 2.24
2060 2105 8.623903 CATATGTTGCCTACATGTTACAAAGAT 58.376 33.333 2.30 1.64 46.81 2.40
2303 2348 7.529560 GCCCTGAATACAAATATCTAGGGACAT 60.530 40.741 10.03 0.00 41.91 3.06
2309 2354 8.037758 CCTACAGCCCTGAATACAAATATCTAG 58.962 40.741 1.69 0.00 0.00 2.43
2369 2414 4.695217 ACTCTCACACGCAAAAAGAAAA 57.305 36.364 0.00 0.00 0.00 2.29
2370 2415 5.758296 AGATACTCTCACACGCAAAAAGAAA 59.242 36.000 0.00 0.00 0.00 2.52
2371 2416 5.177511 CAGATACTCTCACACGCAAAAAGAA 59.822 40.000 0.00 0.00 0.00 2.52
2372 2417 4.686091 CAGATACTCTCACACGCAAAAAGA 59.314 41.667 0.00 0.00 0.00 2.52
2373 2418 4.449068 ACAGATACTCTCACACGCAAAAAG 59.551 41.667 0.00 0.00 0.00 2.27
2374 2419 4.377021 ACAGATACTCTCACACGCAAAAA 58.623 39.130 0.00 0.00 0.00 1.94
2376 2421 3.005367 TGACAGATACTCTCACACGCAAA 59.995 43.478 0.00 0.00 0.00 3.68
2378 2423 2.159382 TGACAGATACTCTCACACGCA 58.841 47.619 0.00 0.00 0.00 5.24
2380 2425 4.108336 CCAATGACAGATACTCTCACACG 58.892 47.826 0.00 0.00 0.00 4.49
2381 2426 5.330455 TCCAATGACAGATACTCTCACAC 57.670 43.478 0.00 0.00 0.00 3.82
2383 2428 8.986847 CAAATATCCAATGACAGATACTCTCAC 58.013 37.037 0.00 0.00 0.00 3.51
2398 2444 8.949421 ACCTAGTCCTGAATACAAATATCCAAT 58.051 33.333 0.00 0.00 0.00 3.16
2497 2545 7.321908 CAAATATGGTTTCATGAATGGACACA 58.678 34.615 9.40 5.82 34.96 3.72
2499 2547 6.070938 TGCAAATATGGTTTCATGAATGGACA 60.071 34.615 9.40 6.65 34.96 4.02
2533 2581 3.137544 TGTTAGAACCTTCCTTGGCTTCA 59.862 43.478 0.00 0.00 0.00 3.02
2551 2599 9.066892 AGAAATGCTTCAAATGTACTCTTGTTA 57.933 29.630 0.00 0.00 33.64 2.41
2869 2926 3.246699 CAGTTCGAAGAAAACGCCAGTTA 59.753 43.478 0.00 0.00 45.90 2.24
2886 2943 0.980423 AGAGCCAGGAGGAACAGTTC 59.020 55.000 4.52 4.52 36.89 3.01
3147 3245 9.436957 CAACAGTAGTACCTCAAGATTGTTTAT 57.563 33.333 0.00 0.00 0.00 1.40
3152 3250 6.455647 TGACAACAGTAGTACCTCAAGATTG 58.544 40.000 0.00 0.00 0.00 2.67
3175 3273 1.466360 GCAGCGCCATAACAAGAACTG 60.466 52.381 2.29 0.00 0.00 3.16
3176 3274 0.804989 GCAGCGCCATAACAAGAACT 59.195 50.000 2.29 0.00 0.00 3.01
3177 3275 0.804989 AGCAGCGCCATAACAAGAAC 59.195 50.000 2.29 0.00 0.00 3.01
3258 3356 6.782082 AGCAAGAATTAAGAAGGAAATCCC 57.218 37.500 0.00 0.00 36.42 3.85
3259 3357 7.830739 TCAAGCAAGAATTAAGAAGGAAATCC 58.169 34.615 0.00 0.00 0.00 3.01
3260 3358 9.866798 AATCAAGCAAGAATTAAGAAGGAAATC 57.133 29.630 0.00 0.00 0.00 2.17
3263 3361 9.739276 TCTAATCAAGCAAGAATTAAGAAGGAA 57.261 29.630 0.00 0.00 0.00 3.36
3264 3362 9.911788 ATCTAATCAAGCAAGAATTAAGAAGGA 57.088 29.630 0.00 0.00 0.00 3.36
3274 3372 9.842775 AGATGTATCAATCTAATCAAGCAAGAA 57.157 29.630 0.00 0.00 35.09 2.52
3275 3373 9.486497 GAGATGTATCAATCTAATCAAGCAAGA 57.514 33.333 0.00 0.00 37.03 3.02
3276 3374 8.719648 GGAGATGTATCAATCTAATCAAGCAAG 58.280 37.037 0.00 0.00 37.03 4.01
3277 3375 8.435187 AGGAGATGTATCAATCTAATCAAGCAA 58.565 33.333 0.00 0.00 37.03 3.91
3278 3376 7.971201 AGGAGATGTATCAATCTAATCAAGCA 58.029 34.615 0.00 0.00 37.03 3.91
3279 3377 8.313292 AGAGGAGATGTATCAATCTAATCAAGC 58.687 37.037 0.00 0.00 37.03 4.01
3280 3378 9.859427 GAGAGGAGATGTATCAATCTAATCAAG 57.141 37.037 0.00 0.00 37.03 3.02
3281 3379 9.599056 AGAGAGGAGATGTATCAATCTAATCAA 57.401 33.333 0.00 0.00 37.03 2.57
3282 3380 9.599056 AAGAGAGGAGATGTATCAATCTAATCA 57.401 33.333 0.00 0.00 37.03 2.57
3309 3407 9.496710 TGGGAGTCAAGTAAACCTCTTTATATA 57.503 33.333 0.00 0.00 0.00 0.86
3310 3408 8.388656 TGGGAGTCAAGTAAACCTCTTTATAT 57.611 34.615 0.00 0.00 0.00 0.86
3311 3409 7.801893 TGGGAGTCAAGTAAACCTCTTTATA 57.198 36.000 0.00 0.00 0.00 0.98
3312 3410 6.697641 TGGGAGTCAAGTAAACCTCTTTAT 57.302 37.500 0.00 0.00 0.00 1.40
3313 3411 6.503560 TTGGGAGTCAAGTAAACCTCTTTA 57.496 37.500 0.00 0.00 0.00 1.85
3314 3412 5.377478 CTTGGGAGTCAAGTAAACCTCTTT 58.623 41.667 0.00 0.00 45.81 2.52
3315 3413 4.974399 CTTGGGAGTCAAGTAAACCTCTT 58.026 43.478 0.00 0.00 45.81 2.85
3316 3414 4.625607 CTTGGGAGTCAAGTAAACCTCT 57.374 45.455 0.00 0.00 45.81 3.69
3326 3424 1.846261 AGCCTTGCTTGGGAGTCAA 59.154 52.632 0.00 0.00 33.89 3.18
3327 3425 3.580084 AGCCTTGCTTGGGAGTCA 58.420 55.556 0.00 0.00 33.89 3.41
3339 3437 2.026169 GCTTAGGGGTCAAGTAAGCCTT 60.026 50.000 2.53 0.00 41.83 4.35
3340 3438 1.560146 GCTTAGGGGTCAAGTAAGCCT 59.440 52.381 2.53 0.00 41.83 4.58
3341 3439 1.280998 TGCTTAGGGGTCAAGTAAGCC 59.719 52.381 10.06 0.00 45.37 4.35
3342 3440 2.747989 GTTGCTTAGGGGTCAAGTAAGC 59.252 50.000 6.41 6.41 45.90 3.09
3343 3441 3.344515 GGTTGCTTAGGGGTCAAGTAAG 58.655 50.000 0.00 0.00 29.84 2.34
3344 3442 2.289819 CGGTTGCTTAGGGGTCAAGTAA 60.290 50.000 0.00 0.00 0.00 2.24
3345 3443 1.276989 CGGTTGCTTAGGGGTCAAGTA 59.723 52.381 0.00 0.00 0.00 2.24
3346 3444 0.036306 CGGTTGCTTAGGGGTCAAGT 59.964 55.000 0.00 0.00 0.00 3.16
3347 3445 0.323629 TCGGTTGCTTAGGGGTCAAG 59.676 55.000 0.00 0.00 0.00 3.02
3348 3446 0.035739 GTCGGTTGCTTAGGGGTCAA 59.964 55.000 0.00 0.00 0.00 3.18
3349 3447 1.675219 GTCGGTTGCTTAGGGGTCA 59.325 57.895 0.00 0.00 0.00 4.02
3350 3448 1.078637 GGTCGGTTGCTTAGGGGTC 60.079 63.158 0.00 0.00 0.00 4.46
3351 3449 2.599757 GGGTCGGTTGCTTAGGGGT 61.600 63.158 0.00 0.00 0.00 4.95
3352 3450 1.848886 AAGGGTCGGTTGCTTAGGGG 61.849 60.000 0.00 0.00 0.00 4.79
3353 3451 0.906775 TAAGGGTCGGTTGCTTAGGG 59.093 55.000 0.00 0.00 0.00 3.53
3354 3452 2.434702 AGATAAGGGTCGGTTGCTTAGG 59.565 50.000 0.00 0.00 0.00 2.69
3355 3453 3.385111 AGAGATAAGGGTCGGTTGCTTAG 59.615 47.826 0.00 0.00 0.00 2.18
3356 3454 3.371965 AGAGATAAGGGTCGGTTGCTTA 58.628 45.455 0.00 0.00 0.00 3.09
3357 3455 2.188817 AGAGATAAGGGTCGGTTGCTT 58.811 47.619 0.00 0.00 0.00 3.91
3358 3456 1.867363 AGAGATAAGGGTCGGTTGCT 58.133 50.000 0.00 0.00 0.00 3.91
3359 3457 3.814005 TTAGAGATAAGGGTCGGTTGC 57.186 47.619 0.00 0.00 0.00 4.17
3360 3458 6.704937 GGTTAATTAGAGATAAGGGTCGGTTG 59.295 42.308 0.00 0.00 0.00 3.77
3361 3459 6.183361 GGGTTAATTAGAGATAAGGGTCGGTT 60.183 42.308 0.00 0.00 0.00 4.44
3362 3460 5.306419 GGGTTAATTAGAGATAAGGGTCGGT 59.694 44.000 0.00 0.00 0.00 4.69
3363 3461 5.543020 AGGGTTAATTAGAGATAAGGGTCGG 59.457 44.000 0.00 0.00 0.00 4.79
3364 3462 6.667558 AGGGTTAATTAGAGATAAGGGTCG 57.332 41.667 0.00 0.00 0.00 4.79
3365 3463 9.377238 TCTTAGGGTTAATTAGAGATAAGGGTC 57.623 37.037 8.51 0.00 0.00 4.46
3366 3464 9.156940 GTCTTAGGGTTAATTAGAGATAAGGGT 57.843 37.037 8.51 0.00 0.00 4.34
3367 3465 9.382307 AGTCTTAGGGTTAATTAGAGATAAGGG 57.618 37.037 8.51 0.00 0.00 3.95
3373 3471 9.155785 CCCATTAGTCTTAGGGTTAATTAGAGA 57.844 37.037 0.00 0.00 36.52 3.10
3374 3472 7.878644 GCCCATTAGTCTTAGGGTTAATTAGAG 59.121 40.741 0.00 0.00 43.42 2.43
3375 3473 7.202158 GGCCCATTAGTCTTAGGGTTAATTAGA 60.202 40.741 0.00 0.00 43.42 2.10
3376 3474 6.940867 GGCCCATTAGTCTTAGGGTTAATTAG 59.059 42.308 0.00 0.00 43.42 1.73
3377 3475 6.183361 GGGCCCATTAGTCTTAGGGTTAATTA 60.183 42.308 19.95 0.00 43.42 1.40
3378 3476 5.399842 GGGCCCATTAGTCTTAGGGTTAATT 60.400 44.000 19.95 0.00 43.42 1.40
3379 3477 4.105858 GGGCCCATTAGTCTTAGGGTTAAT 59.894 45.833 19.95 0.00 43.42 1.40
3380 3478 3.460712 GGGCCCATTAGTCTTAGGGTTAA 59.539 47.826 19.95 0.00 43.42 2.01
3381 3479 3.050835 GGGCCCATTAGTCTTAGGGTTA 58.949 50.000 19.95 0.00 43.42 2.85
3382 3480 1.850998 GGGCCCATTAGTCTTAGGGTT 59.149 52.381 19.95 0.00 43.42 4.11
3383 3481 1.274767 TGGGCCCATTAGTCTTAGGGT 60.275 52.381 24.45 0.00 43.42 4.34
3384 3482 1.518367 TGGGCCCATTAGTCTTAGGG 58.482 55.000 24.45 0.00 44.37 3.53
3385 3483 3.884037 AATGGGCCCATTAGTCTTAGG 57.116 47.619 42.77 0.00 43.92 2.69
3400 3498 2.370849 AGTACGTAATGGGCCTAATGGG 59.629 50.000 4.53 0.00 38.36 4.00
3401 3499 3.323979 AGAGTACGTAATGGGCCTAATGG 59.676 47.826 4.53 0.00 0.00 3.16
3402 3500 4.602340 AGAGTACGTAATGGGCCTAATG 57.398 45.455 4.53 0.00 0.00 1.90
3403 3501 5.599656 TGTTAGAGTACGTAATGGGCCTAAT 59.400 40.000 4.53 0.00 0.00 1.73
3404 3502 4.955450 TGTTAGAGTACGTAATGGGCCTAA 59.045 41.667 4.53 0.00 0.00 2.69
3405 3503 4.339247 GTGTTAGAGTACGTAATGGGCCTA 59.661 45.833 4.53 0.00 0.00 3.93
3406 3504 3.131755 GTGTTAGAGTACGTAATGGGCCT 59.868 47.826 4.53 0.00 0.00 5.19
3407 3505 3.131755 AGTGTTAGAGTACGTAATGGGCC 59.868 47.826 0.00 0.00 0.00 5.80
3408 3506 4.382345 AGTGTTAGAGTACGTAATGGGC 57.618 45.455 0.00 0.00 0.00 5.36
3409 3507 5.717119 ACAAGTGTTAGAGTACGTAATGGG 58.283 41.667 0.00 0.00 0.00 4.00
3410 3508 8.804743 CATAACAAGTGTTAGAGTACGTAATGG 58.195 37.037 0.00 0.00 42.94 3.16
3411 3509 8.804743 CCATAACAAGTGTTAGAGTACGTAATG 58.195 37.037 0.00 0.00 42.94 1.90
3412 3510 7.490402 GCCATAACAAGTGTTAGAGTACGTAAT 59.510 37.037 9.58 0.00 42.94 1.89
3413 3511 6.808212 GCCATAACAAGTGTTAGAGTACGTAA 59.192 38.462 9.58 0.00 42.94 3.18
3414 3512 6.324819 GCCATAACAAGTGTTAGAGTACGTA 58.675 40.000 9.58 0.00 42.94 3.57
3415 3513 5.166398 GCCATAACAAGTGTTAGAGTACGT 58.834 41.667 9.58 0.00 42.94 3.57
3416 3514 4.264614 CGCCATAACAAGTGTTAGAGTACG 59.735 45.833 9.58 5.62 42.94 3.67
3417 3515 4.032558 GCGCCATAACAAGTGTTAGAGTAC 59.967 45.833 9.58 0.00 42.94 2.73
3418 3516 4.081862 AGCGCCATAACAAGTGTTAGAGTA 60.082 41.667 2.29 0.00 42.94 2.59
3419 3517 3.000727 GCGCCATAACAAGTGTTAGAGT 58.999 45.455 9.58 0.00 42.94 3.24
3420 3518 3.062639 CAGCGCCATAACAAGTGTTAGAG 59.937 47.826 2.29 4.91 42.94 2.43
3421 3519 3.000041 CAGCGCCATAACAAGTGTTAGA 59.000 45.455 2.29 0.00 42.94 2.10
3422 3520 2.476185 GCAGCGCCATAACAAGTGTTAG 60.476 50.000 2.29 0.00 42.94 2.34
3423 3521 1.466950 GCAGCGCCATAACAAGTGTTA 59.533 47.619 2.29 6.37 43.71 2.41
3424 3522 0.240945 GCAGCGCCATAACAAGTGTT 59.759 50.000 2.29 1.75 41.73 3.32
3425 3523 0.606401 AGCAGCGCCATAACAAGTGT 60.606 50.000 2.29 0.00 0.00 3.55
3426 3524 1.328680 CTAGCAGCGCCATAACAAGTG 59.671 52.381 2.29 0.00 0.00 3.16
3427 3525 1.207089 TCTAGCAGCGCCATAACAAGT 59.793 47.619 2.29 0.00 0.00 3.16
3428 3526 1.939974 TCTAGCAGCGCCATAACAAG 58.060 50.000 2.29 0.00 0.00 3.16
3429 3527 2.279741 CTTCTAGCAGCGCCATAACAA 58.720 47.619 2.29 0.00 0.00 2.83
3430 3528 1.473257 CCTTCTAGCAGCGCCATAACA 60.473 52.381 2.29 0.00 0.00 2.41
3431 3529 1.202533 TCCTTCTAGCAGCGCCATAAC 60.203 52.381 2.29 0.00 0.00 1.89
3432 3530 1.069204 CTCCTTCTAGCAGCGCCATAA 59.931 52.381 2.29 0.00 0.00 1.90
3433 3531 0.676184 CTCCTTCTAGCAGCGCCATA 59.324 55.000 2.29 0.00 0.00 2.74
3434 3532 1.445095 CTCCTTCTAGCAGCGCCAT 59.555 57.895 2.29 0.00 0.00 4.40
3435 3533 2.725312 CCTCCTTCTAGCAGCGCCA 61.725 63.158 2.29 0.00 0.00 5.69
3436 3534 2.107953 CCTCCTTCTAGCAGCGCC 59.892 66.667 2.29 0.00 0.00 6.53
3437 3535 2.107953 CCCTCCTTCTAGCAGCGC 59.892 66.667 0.00 0.00 0.00 5.92
3438 3536 2.107953 GCCCTCCTTCTAGCAGCG 59.892 66.667 0.00 0.00 0.00 5.18
3439 3537 2.107953 CGCCCTCCTTCTAGCAGC 59.892 66.667 0.00 0.00 0.00 5.25
3440 3538 2.107953 GCGCCCTCCTTCTAGCAG 59.892 66.667 0.00 0.00 0.00 4.24
3441 3539 3.838271 CGCGCCCTCCTTCTAGCA 61.838 66.667 0.00 0.00 0.00 3.49
3442 3540 3.492311 CTCGCGCCCTCCTTCTAGC 62.492 68.421 0.00 0.00 0.00 3.42
3443 3541 2.725008 CTCGCGCCCTCCTTCTAG 59.275 66.667 0.00 0.00 0.00 2.43
3444 3542 2.833582 CCTCGCGCCCTCCTTCTA 60.834 66.667 0.00 0.00 0.00 2.10
3467 3565 4.803908 CTTCCCTCTTGCCCGGCC 62.804 72.222 7.03 0.00 0.00 6.13
3468 3566 4.803908 CCTTCCCTCTTGCCCGGC 62.804 72.222 1.04 1.04 0.00 6.13
3469 3567 4.115199 CCCTTCCCTCTTGCCCGG 62.115 72.222 0.00 0.00 0.00 5.73
3470 3568 1.926426 AATCCCTTCCCTCTTGCCCG 61.926 60.000 0.00 0.00 0.00 6.13
3471 3569 0.336392 AAATCCCTTCCCTCTTGCCC 59.664 55.000 0.00 0.00 0.00 5.36
3568 3666 2.781681 TGCTTAGGGGTCAAGTAAGC 57.218 50.000 6.41 6.41 45.90 3.09
3590 3688 9.155785 CTTAGGGTTAATTAGAGATAAGGGTCA 57.844 37.037 0.00 0.00 0.00 4.02
3677 3775 1.669115 GCTGCAGCTCGAGGACAAA 60.669 57.895 31.33 0.00 38.21 2.83
3678 3776 2.047844 GCTGCAGCTCGAGGACAA 60.048 61.111 31.33 0.00 38.21 3.18
3694 3792 6.120220 AGTCATGGTTATAAGTTGGTTAGGC 58.880 40.000 0.00 0.00 0.00 3.93
3787 3885 0.400213 AGCGTCCCAGTCCATTTCAA 59.600 50.000 0.00 0.00 0.00 2.69
3797 3895 2.163613 GGTCCAAAATAAAGCGTCCCAG 59.836 50.000 0.00 0.00 0.00 4.45
3800 3898 1.475280 GGGGTCCAAAATAAAGCGTCC 59.525 52.381 0.00 0.00 0.00 4.79
3847 3945 1.443025 TACACGTGCACATCCGACG 60.443 57.895 17.22 3.06 39.03 5.12
3850 3948 1.955529 GCTGTACACGTGCACATCCG 61.956 60.000 21.37 11.55 0.00 4.18
3854 3952 1.885388 GTGGCTGTACACGTGCACA 60.885 57.895 20.04 20.04 0.00 4.57
3876 3974 0.107017 CAGGTGGTGTCCATGGGATC 60.107 60.000 13.02 3.75 35.28 3.36
3937 4035 1.134699 CGCCTCTGCTGGTCAATCTTA 60.135 52.381 0.00 0.00 34.43 2.10
3942 4040 4.704833 GGCGCCTCTGCTGGTCAA 62.705 66.667 22.15 0.00 34.43 3.18
3973 4071 1.885157 CACCACTGCATTTCGCCAT 59.115 52.632 0.00 0.00 41.33 4.40
3978 4076 3.975992 CGTAGCACCACTGCATTTC 57.024 52.632 0.00 0.00 46.97 2.17
4035 4133 1.890041 CAAACCAACAGCCGTCCGA 60.890 57.895 0.00 0.00 0.00 4.55
4037 4135 2.335011 GCAAACCAACAGCCGTCC 59.665 61.111 0.00 0.00 0.00 4.79
4063 4161 1.301293 CAAGCCCTCCACTCTTCCC 59.699 63.158 0.00 0.00 0.00 3.97
4070 4168 2.825836 CCATCGCAAGCCCTCCAC 60.826 66.667 0.00 0.00 37.18 4.02
4071 4169 3.008517 TCCATCGCAAGCCCTCCA 61.009 61.111 0.00 0.00 37.18 3.86
4120 4223 1.656095 CTCAAAGTCTTCGACATCGGC 59.344 52.381 0.73 0.00 40.29 5.54
4122 4225 2.917971 GACCTCAAAGTCTTCGACATCG 59.082 50.000 0.00 0.00 34.60 3.84
4130 4233 0.603975 GGCAGCGACCTCAAAGTCTT 60.604 55.000 0.00 0.00 34.46 3.01
4155 4258 2.202919 GCGGGCATGCCATTTTCC 60.203 61.111 36.56 17.93 37.98 3.13
4176 4279 1.963464 GCATGCAGTTTCCCCCATGG 61.963 60.000 14.21 4.14 36.47 3.66
4177 4280 1.518774 GCATGCAGTTTCCCCCATG 59.481 57.895 14.21 0.00 38.41 3.66
4178 4281 1.686800 GGCATGCAGTTTCCCCCAT 60.687 57.895 21.36 0.00 0.00 4.00
4179 4282 2.283821 GGCATGCAGTTTCCCCCA 60.284 61.111 21.36 0.00 0.00 4.96
4180 4283 3.076916 GGGCATGCAGTTTCCCCC 61.077 66.667 21.36 4.69 32.60 5.40
4181 4284 1.891722 CTTGGGCATGCAGTTTCCCC 61.892 60.000 21.36 10.01 37.97 4.81
4182 4285 0.899717 TCTTGGGCATGCAGTTTCCC 60.900 55.000 21.36 10.79 39.22 3.97
4183 4286 1.135721 GATCTTGGGCATGCAGTTTCC 59.864 52.381 21.36 11.57 0.00 3.13
4184 4287 1.135721 GGATCTTGGGCATGCAGTTTC 59.864 52.381 21.36 9.70 0.00 2.78
4185 4288 1.188863 GGATCTTGGGCATGCAGTTT 58.811 50.000 21.36 0.99 0.00 2.66
4186 4289 0.685458 GGGATCTTGGGCATGCAGTT 60.685 55.000 21.36 3.29 0.00 3.16
4187 4290 1.076485 GGGATCTTGGGCATGCAGT 60.076 57.895 21.36 0.00 0.00 4.40
4188 4291 1.107538 CAGGGATCTTGGGCATGCAG 61.108 60.000 21.36 8.71 0.00 4.41
4189 4292 1.076559 CAGGGATCTTGGGCATGCA 60.077 57.895 21.36 0.00 0.00 3.96
4190 4293 0.178970 ATCAGGGATCTTGGGCATGC 60.179 55.000 9.90 9.90 0.00 4.06
4191 4294 1.617322 CATCAGGGATCTTGGGCATG 58.383 55.000 0.00 0.00 0.00 4.06
4192 4295 0.178970 GCATCAGGGATCTTGGGCAT 60.179 55.000 0.00 0.00 0.00 4.40
4193 4296 1.228228 GCATCAGGGATCTTGGGCA 59.772 57.895 0.00 0.00 0.00 5.36
4194 4297 0.822532 CTGCATCAGGGATCTTGGGC 60.823 60.000 0.00 1.36 0.00 5.36
4195 4298 0.822532 GCTGCATCAGGGATCTTGGG 60.823 60.000 0.00 0.00 31.21 4.12
4196 4299 1.164662 CGCTGCATCAGGGATCTTGG 61.165 60.000 0.00 0.00 45.41 3.61
4197 4300 1.164662 CCGCTGCATCAGGGATCTTG 61.165 60.000 11.72 0.00 45.41 3.02
4198 4301 1.147824 CCGCTGCATCAGGGATCTT 59.852 57.895 11.72 0.00 45.41 2.40
4199 4302 1.126329 ATCCGCTGCATCAGGGATCT 61.126 55.000 11.72 0.00 45.41 2.75
4200 4303 0.954449 CATCCGCTGCATCAGGGATC 60.954 60.000 11.72 0.00 45.41 3.36
4201 4304 1.072678 CATCCGCTGCATCAGGGAT 59.927 57.895 11.72 10.48 45.41 3.85
4202 4305 2.036428 CTCATCCGCTGCATCAGGGA 62.036 60.000 11.72 8.87 45.41 4.20
4203 4306 1.597302 CTCATCCGCTGCATCAGGG 60.597 63.158 0.00 4.18 42.81 4.45
4204 4307 0.035036 ATCTCATCCGCTGCATCAGG 59.965 55.000 0.00 0.00 31.21 3.86
4205 4308 1.430479 GATCTCATCCGCTGCATCAG 58.570 55.000 0.00 0.00 34.12 2.90
4206 4309 0.319297 CGATCTCATCCGCTGCATCA 60.319 55.000 0.00 0.00 0.00 3.07
4207 4310 0.038801 TCGATCTCATCCGCTGCATC 60.039 55.000 0.00 0.00 0.00 3.91
4208 4311 0.038435 CTCGATCTCATCCGCTGCAT 60.038 55.000 0.00 0.00 0.00 3.96
4209 4312 1.361632 CTCGATCTCATCCGCTGCA 59.638 57.895 0.00 0.00 0.00 4.41
4210 4313 1.372748 CCTCGATCTCATCCGCTGC 60.373 63.158 0.00 0.00 0.00 5.25
4211 4314 0.039617 GACCTCGATCTCATCCGCTG 60.040 60.000 0.00 0.00 0.00 5.18
4212 4315 1.175983 GGACCTCGATCTCATCCGCT 61.176 60.000 0.00 0.00 0.00 5.52
4213 4316 1.175983 AGGACCTCGATCTCATCCGC 61.176 60.000 0.00 0.00 34.46 5.54
4214 4317 1.323412 AAGGACCTCGATCTCATCCG 58.677 55.000 0.00 0.00 34.46 4.18
4215 4318 2.432510 ACAAAGGACCTCGATCTCATCC 59.567 50.000 0.00 0.00 0.00 3.51
4216 4319 3.452474 CACAAAGGACCTCGATCTCATC 58.548 50.000 0.00 0.00 0.00 2.92
4217 4320 2.419297 GCACAAAGGACCTCGATCTCAT 60.419 50.000 0.00 0.00 0.00 2.90
4218 4321 1.066858 GCACAAAGGACCTCGATCTCA 60.067 52.381 0.00 0.00 0.00 3.27
4219 4322 1.066858 TGCACAAAGGACCTCGATCTC 60.067 52.381 0.00 0.00 0.00 2.75
4220 4323 0.976641 TGCACAAAGGACCTCGATCT 59.023 50.000 0.00 0.00 0.00 2.75
4221 4324 1.363744 CTGCACAAAGGACCTCGATC 58.636 55.000 0.00 0.00 0.00 3.69
4222 4325 0.674895 GCTGCACAAAGGACCTCGAT 60.675 55.000 0.00 0.00 0.00 3.59
4223 4326 1.301716 GCTGCACAAAGGACCTCGA 60.302 57.895 0.00 0.00 0.00 4.04
4224 4327 2.671177 CGCTGCACAAAGGACCTCG 61.671 63.158 0.00 0.00 0.00 4.63
4225 4328 0.884704 TTCGCTGCACAAAGGACCTC 60.885 55.000 0.00 0.00 0.00 3.85
4226 4329 0.886490 CTTCGCTGCACAAAGGACCT 60.886 55.000 0.00 0.00 0.00 3.85
4227 4330 1.576421 CTTCGCTGCACAAAGGACC 59.424 57.895 0.00 0.00 0.00 4.46
4228 4331 1.576421 CCTTCGCTGCACAAAGGAC 59.424 57.895 16.31 0.00 41.78 3.85
4229 4332 1.600636 CCCTTCGCTGCACAAAGGA 60.601 57.895 20.72 0.00 41.78 3.36
4230 4333 2.956987 CCCTTCGCTGCACAAAGG 59.043 61.111 15.00 15.00 39.44 3.11
4231 4334 2.074230 TTGCCCTTCGCTGCACAAAG 62.074 55.000 0.00 0.00 37.18 2.77
4232 4335 2.124060 TTGCCCTTCGCTGCACAAA 61.124 52.632 0.00 0.00 37.18 2.83
4233 4336 2.518112 TTGCCCTTCGCTGCACAA 60.518 55.556 0.00 0.00 37.18 3.33
4234 4337 3.286751 GTTGCCCTTCGCTGCACA 61.287 61.111 0.00 0.00 37.18 4.57
4235 4338 2.555547 AAGTTGCCCTTCGCTGCAC 61.556 57.895 0.00 0.00 37.18 4.57
4236 4339 2.203337 AAGTTGCCCTTCGCTGCA 60.203 55.556 0.00 0.00 38.78 4.41
4237 4340 2.256461 CAAGTTGCCCTTCGCTGC 59.744 61.111 0.00 0.00 38.78 5.25
4238 4341 1.580845 CTCCAAGTTGCCCTTCGCTG 61.581 60.000 0.00 0.00 38.78 5.18
4239 4342 1.302832 CTCCAAGTTGCCCTTCGCT 60.303 57.895 0.00 0.00 38.78 4.93
4240 4343 2.335712 CCTCCAAGTTGCCCTTCGC 61.336 63.158 0.00 0.00 38.31 4.70
4241 4344 0.674895 CTCCTCCAAGTTGCCCTTCG 60.675 60.000 0.00 0.00 0.00 3.79
4242 4345 0.962855 GCTCCTCCAAGTTGCCCTTC 60.963 60.000 0.00 0.00 0.00 3.46
4243 4346 1.075659 GCTCCTCCAAGTTGCCCTT 59.924 57.895 0.00 0.00 0.00 3.95
4244 4347 2.759795 GCTCCTCCAAGTTGCCCT 59.240 61.111 0.00 0.00 0.00 5.19
4245 4348 2.747855 CGCTCCTCCAAGTTGCCC 60.748 66.667 0.00 0.00 0.00 5.36
4246 4349 2.747855 CCGCTCCTCCAAGTTGCC 60.748 66.667 0.00 0.00 0.00 4.52
4247 4350 3.435186 GCCGCTCCTCCAAGTTGC 61.435 66.667 0.00 0.00 0.00 4.17
4248 4351 1.600636 TTGCCGCTCCTCCAAGTTG 60.601 57.895 0.00 0.00 0.00 3.16
4249 4352 1.600916 GTTGCCGCTCCTCCAAGTT 60.601 57.895 0.00 0.00 0.00 2.66
4250 4353 2.032681 GTTGCCGCTCCTCCAAGT 59.967 61.111 0.00 0.00 0.00 3.16
4251 4354 2.037136 CAGTTGCCGCTCCTCCAAG 61.037 63.158 0.00 0.00 0.00 3.61
4252 4355 2.032528 CAGTTGCCGCTCCTCCAA 59.967 61.111 0.00 0.00 0.00 3.53
4253 4356 4.704833 GCAGTTGCCGCTCCTCCA 62.705 66.667 0.00 0.00 34.31 3.86
4254 4357 4.704833 TGCAGTTGCCGCTCCTCC 62.705 66.667 1.06 0.00 41.18 4.30
4255 4358 3.123620 CTGCAGTTGCCGCTCCTC 61.124 66.667 5.25 0.00 41.18 3.71
4256 4359 3.630013 TCTGCAGTTGCCGCTCCT 61.630 61.111 14.67 0.00 41.18 3.69
4257 4360 3.426568 GTCTGCAGTTGCCGCTCC 61.427 66.667 14.67 0.00 41.18 4.70
4258 4361 3.426568 GGTCTGCAGTTGCCGCTC 61.427 66.667 14.67 0.00 41.18 5.03
4259 4362 4.254709 TGGTCTGCAGTTGCCGCT 62.255 61.111 14.67 0.00 41.18 5.52
4260 4363 4.030452 GTGGTCTGCAGTTGCCGC 62.030 66.667 14.67 16.35 41.18 6.53
4261 4364 3.716006 CGTGGTCTGCAGTTGCCG 61.716 66.667 14.67 8.75 41.18 5.69
4262 4365 4.030452 GCGTGGTCTGCAGTTGCC 62.030 66.667 14.67 14.65 41.18 4.52
4263 4366 2.518836 GATGCGTGGTCTGCAGTTGC 62.519 60.000 14.67 11.82 46.98 4.17
4264 4367 0.952497 AGATGCGTGGTCTGCAGTTG 60.952 55.000 14.67 1.49 46.98 3.16
4265 4368 0.671781 GAGATGCGTGGTCTGCAGTT 60.672 55.000 14.67 0.00 46.98 3.16
4266 4369 1.079543 GAGATGCGTGGTCTGCAGT 60.080 57.895 14.67 0.00 46.98 4.40
4267 4370 1.812922 GGAGATGCGTGGTCTGCAG 60.813 63.158 7.63 7.63 46.98 4.41
4269 4372 2.512515 GGGAGATGCGTGGTCTGC 60.513 66.667 0.00 0.00 33.79 4.26
4270 4373 2.202797 CGGGAGATGCGTGGTCTG 60.203 66.667 0.00 0.00 0.00 3.51
4271 4374 4.148825 GCGGGAGATGCGTGGTCT 62.149 66.667 0.00 0.00 0.00 3.85
4272 4375 4.451150 TGCGGGAGATGCGTGGTC 62.451 66.667 0.00 0.00 34.24 4.02
4273 4376 4.760047 GTGCGGGAGATGCGTGGT 62.760 66.667 0.00 0.00 34.24 4.16
4274 4377 4.758251 TGTGCGGGAGATGCGTGG 62.758 66.667 0.00 0.00 34.24 4.94
4275 4378 3.490759 GTGTGCGGGAGATGCGTG 61.491 66.667 0.00 0.00 34.24 5.34
4294 4397 3.764810 CTGCCTCCTAGCGCGTCAG 62.765 68.421 8.43 4.92 34.65 3.51
4295 4398 3.826754 CTGCCTCCTAGCGCGTCA 61.827 66.667 8.43 0.00 34.65 4.35
4299 4402 3.227276 TAGGCTGCCTCCTAGCGC 61.227 66.667 27.16 0.00 42.03 5.92
4300 4403 2.081425 CTGTAGGCTGCCTCCTAGCG 62.081 65.000 27.16 5.25 42.03 4.26
4301 4404 1.745264 CTGTAGGCTGCCTCCTAGC 59.255 63.158 27.16 11.76 39.25 3.42
4302 4405 1.745264 GCTGTAGGCTGCCTCCTAG 59.255 63.158 27.16 21.11 39.25 3.02
4303 4406 3.956377 GCTGTAGGCTGCCTCCTA 58.044 61.111 27.16 11.69 37.66 2.94
4312 4415 4.840005 GGCGGTGAGGCTGTAGGC 62.840 72.222 0.00 0.00 42.90 3.93
4313 4416 4.514577 CGGCGGTGAGGCTGTAGG 62.515 72.222 0.00 0.00 44.22 3.18
4334 4437 2.644555 GATCGCTACCCGCCACATGT 62.645 60.000 0.00 0.00 36.73 3.21
4338 4441 3.379865 TTGGATCGCTACCCGCCAC 62.380 63.158 0.00 0.00 36.73 5.01
4342 4445 1.299165 CGTCTTGGATCGCTACCCG 60.299 63.158 0.00 0.00 38.61 5.28
4343 4446 1.067582 CCGTCTTGGATCGCTACCC 59.932 63.158 0.00 0.00 42.00 3.69
4353 4456 1.554042 CGTCACCGTTTCCGTCTTGG 61.554 60.000 0.00 0.00 40.09 3.61
4355 4458 1.300388 CCGTCACCGTTTCCGTCTT 60.300 57.895 0.00 0.00 0.00 3.01
4356 4459 2.337532 CCGTCACCGTTTCCGTCT 59.662 61.111 0.00 0.00 0.00 4.18
4361 4464 2.736682 CCATCGCCGTCACCGTTTC 61.737 63.158 0.00 0.00 0.00 2.78
4362 4465 2.740826 CCATCGCCGTCACCGTTT 60.741 61.111 0.00 0.00 0.00 3.60
4363 4466 4.752879 CCCATCGCCGTCACCGTT 62.753 66.667 0.00 0.00 0.00 4.44
4385 4488 0.951040 CGCTTCACCAAGTCCAGTCC 60.951 60.000 0.00 0.00 31.45 3.85
4387 4490 1.071471 CCGCTTCACCAAGTCCAGT 59.929 57.895 0.00 0.00 31.45 4.00
4388 4491 1.672356 CCCGCTTCACCAAGTCCAG 60.672 63.158 0.00 0.00 31.45 3.86
4389 4492 2.144078 TCCCGCTTCACCAAGTCCA 61.144 57.895 0.00 0.00 31.45 4.02
4390 4493 1.671379 GTCCCGCTTCACCAAGTCC 60.671 63.158 0.00 0.00 31.45 3.85
4392 4495 1.371558 GAGTCCCGCTTCACCAAGT 59.628 57.895 0.00 0.00 31.45 3.16
4393 4496 1.376037 GGAGTCCCGCTTCACCAAG 60.376 63.158 0.00 0.00 0.00 3.61
4394 4497 1.841556 AGGAGTCCCGCTTCACCAA 60.842 57.895 5.25 0.00 37.58 3.67
4395 4498 2.203788 AGGAGTCCCGCTTCACCA 60.204 61.111 5.25 0.00 37.58 4.17
4397 4500 2.435059 GCAGGAGTCCCGCTTCAC 60.435 66.667 10.32 0.00 37.58 3.18
4398 4501 3.706373 GGCAGGAGTCCCGCTTCA 61.706 66.667 16.93 0.00 37.58 3.02
4422 4525 4.570663 CTCCGGTCCCGCATCGAC 62.571 72.222 0.00 0.00 38.24 4.20
4425 4528 4.899239 CAGCTCCGGTCCCGCATC 62.899 72.222 0.00 0.00 38.24 3.91
5210 23407 0.321298 TCGCTTGCTTAGGGGTCAAC 60.321 55.000 4.21 0.00 37.41 3.18
5316 27466 7.124901 AGTGTATTTGAGAAAGATAGAGAGCCA 59.875 37.037 0.00 0.00 0.00 4.75
5317 27467 7.496747 AGTGTATTTGAGAAAGATAGAGAGCC 58.503 38.462 0.00 0.00 0.00 4.70
5400 27552 9.232473 GTTTCAGATTCAGACTTACCCTAAAAT 57.768 33.333 0.00 0.00 0.00 1.82
5436 27588 4.331992 ACAGCATCATGTCTTCAATCTTCG 59.668 41.667 0.00 0.00 0.00 3.79
5493 27645 8.859090 TGAAGTGATTCCTTTAAATTGTGTCAT 58.141 29.630 0.00 0.00 0.00 3.06
5495 27647 7.327032 GCTGAAGTGATTCCTTTAAATTGTGTC 59.673 37.037 0.00 0.00 0.00 3.67
5509 27661 6.709397 TGGATCATAGATTGCTGAAGTGATTC 59.291 38.462 0.00 0.00 0.00 2.52
5520 27672 9.599322 CGTTTACTTAATTGGATCATAGATTGC 57.401 33.333 0.00 0.00 0.00 3.56
5555 27707 4.650754 ACGGACATGTAGAATCACCTAC 57.349 45.455 0.00 0.00 39.46 3.18
5566 27718 3.704800 TCCCATTCAAACGGACATGTA 57.295 42.857 0.00 0.00 0.00 2.29
5588 27740 1.134946 ACTCAGTTGCACACTTTTGCC 59.865 47.619 0.00 0.00 42.25 4.52
5596 27748 1.209261 TCTGGTTCACTCAGTTGCACA 59.791 47.619 0.00 0.00 34.15 4.57
5614 27766 2.042686 TGTGTTGCAGTCTGCTTTCT 57.957 45.000 24.76 0.00 45.31 2.52
5647 27799 2.806019 GCCTCTGTCTGATATGCTGGTG 60.806 54.545 0.00 0.00 0.00 4.17
5677 27829 4.207841 GCAAGAAAAAGTTAGCAACTGCAG 59.792 41.667 13.48 13.48 41.91 4.41
5678 27830 4.111916 GCAAGAAAAAGTTAGCAACTGCA 58.888 39.130 4.22 0.00 41.91 4.41
5789 27941 1.859080 GTAAAGCCATAGACGCTTCCG 59.141 52.381 0.00 0.00 45.69 4.30
5821 27973 2.297315 CACTCTTGTACAGGCTGACAGA 59.703 50.000 23.66 14.22 0.00 3.41
5841 27993 6.096705 TCACAAATTTCAAAAAGAGAGAGGCA 59.903 34.615 0.00 0.00 0.00 4.75
5890 28042 2.945668 AGGCTCGCTTGGAATAAATGAC 59.054 45.455 0.00 0.00 0.00 3.06
5923 28075 6.963117 TTACTAATATGGGGTGGGATAAGG 57.037 41.667 0.00 0.00 0.00 2.69
5945 28097 1.689813 TGTGTGGACGTGTGGTAGATT 59.310 47.619 0.00 0.00 0.00 2.40
5965 28117 8.237811 AGGTAAGAAGAAAATGACACACAAAT 57.762 30.769 0.00 0.00 0.00 2.32
5966 28118 7.639113 AGGTAAGAAGAAAATGACACACAAA 57.361 32.000 0.00 0.00 0.00 2.83
5984 28136 2.092538 TGAGACGGAGGGAGTAGGTAAG 60.093 54.545 0.00 0.00 0.00 2.34
5985 28137 1.918262 TGAGACGGAGGGAGTAGGTAA 59.082 52.381 0.00 0.00 0.00 2.85
5986 28138 1.211457 GTGAGACGGAGGGAGTAGGTA 59.789 57.143 0.00 0.00 0.00 3.08
6002 28154 7.201266 GCTTGCAAAAACGTCTTATATTGTGAG 60.201 37.037 0.00 0.00 0.00 3.51
6003 28155 6.580791 GCTTGCAAAAACGTCTTATATTGTGA 59.419 34.615 0.00 0.00 0.00 3.58
6005 28157 6.677913 AGCTTGCAAAAACGTCTTATATTGT 58.322 32.000 0.00 0.00 0.00 2.71
6006 28158 8.841444 ATAGCTTGCAAAAACGTCTTATATTG 57.159 30.769 0.00 0.00 0.00 1.90
6012 28164 7.200455 AGTAAAATAGCTTGCAAAAACGTCTT 58.800 30.769 0.00 0.00 0.00 3.01
6013 28165 6.735130 AGTAAAATAGCTTGCAAAAACGTCT 58.265 32.000 0.00 0.00 0.00 4.18
6015 28167 6.735130 AGAGTAAAATAGCTTGCAAAAACGT 58.265 32.000 0.00 0.00 0.00 3.99
6017 28169 7.807907 TGCTAGAGTAAAATAGCTTGCAAAAAC 59.192 33.333 0.00 0.00 43.87 2.43
6020 28172 7.121168 ACATGCTAGAGTAAAATAGCTTGCAAA 59.879 33.333 15.76 0.00 46.30 3.68
6022 28174 6.115446 ACATGCTAGAGTAAAATAGCTTGCA 58.885 36.000 15.76 0.00 46.30 4.08
6066 28348 2.329267 TGAGAACAGAGGACATGTGGT 58.671 47.619 1.15 0.00 0.00 4.16
6067 28349 3.407424 TTGAGAACAGAGGACATGTGG 57.593 47.619 1.15 0.00 0.00 4.17
6068 28350 5.121925 CAGATTTGAGAACAGAGGACATGTG 59.878 44.000 1.15 0.00 0.00 3.21
6072 28354 5.752036 ATCAGATTTGAGAACAGAGGACA 57.248 39.130 0.00 0.00 36.61 4.02
6073 28355 5.936956 ACAATCAGATTTGAGAACAGAGGAC 59.063 40.000 0.00 0.00 36.61 3.85
6105 30035 5.817816 ACATCTAGGTTAGAATTGGCTTTCG 59.182 40.000 0.00 0.00 38.50 3.46
6160 30090 6.072452 GCTCTGCCTACAAAATAGAACAACTT 60.072 38.462 0.00 0.00 0.00 2.66
6366 30296 8.014322 TCAAAATATTCAACAGTACTCACGTC 57.986 34.615 0.00 0.00 0.00 4.34
6404 30334 2.827652 CCTAGGAATCGAGCCTTGAAC 58.172 52.381 14.08 0.00 36.96 3.18
6420 30350 3.452627 TCTCTTTTGCCCTTCTAGCCTAG 59.547 47.826 0.00 0.00 0.00 3.02
6442 30372 4.028993 TCTGCCCCTAAGTCGAAAAATT 57.971 40.909 0.00 0.00 0.00 1.82
6516 30447 7.175347 AGAGAACATCAGTGCAAGATAAGTA 57.825 36.000 2.87 0.00 0.00 2.24
6517 30448 6.047511 AGAGAACATCAGTGCAAGATAAGT 57.952 37.500 2.87 0.00 0.00 2.24
6518 30449 9.926158 ATATAGAGAACATCAGTGCAAGATAAG 57.074 33.333 2.87 0.00 0.00 1.73
6545 30476 3.248363 CGTCAAGCTTGTTCACAGAATCA 59.752 43.478 25.19 0.00 0.00 2.57
6857 30792 5.122869 CCCGGATGATGAATGACAATACATC 59.877 44.000 0.73 0.00 39.35 3.06
6879 30814 0.036294 GCTCCTACACCACTTCACCC 60.036 60.000 0.00 0.00 0.00 4.61
6880 30815 0.389948 CGCTCCTACACCACTTCACC 60.390 60.000 0.00 0.00 0.00 4.02
6881 30816 0.601558 TCGCTCCTACACCACTTCAC 59.398 55.000 0.00 0.00 0.00 3.18
6905 30843 7.862372 CACACTGTCAAAATAAGCTAATTGTGT 59.138 33.333 0.00 0.00 33.52 3.72
6936 30874 5.066593 GGAATGTTCTCAGAGGTGAAGTTT 58.933 41.667 0.00 0.00 30.14 2.66
7002 30940 0.737715 CGAAACCCGCAGAGAGGAAG 60.738 60.000 0.00 0.00 0.00 3.46
7017 30955 2.787473 ATGAGTGCCCTTGATCGAAA 57.213 45.000 0.00 0.00 0.00 3.46
7311 31254 5.331876 ACTCAAGAGTAGCAACCAGATAC 57.668 43.478 0.00 0.00 40.43 2.24
7320 31263 8.314751 AGAGCTAAATAAAACTCAAGAGTAGCA 58.685 33.333 16.63 2.23 41.58 3.49
7430 31373 2.417933 CTCTCGAACTGGGCAGAAAATG 59.582 50.000 0.00 0.00 0.00 2.32
7431 31374 2.704572 CTCTCGAACTGGGCAGAAAAT 58.295 47.619 0.00 0.00 0.00 1.82
7567 34275 8.812972 ACTGAACTGTATCCACTCATTACTTTA 58.187 33.333 0.00 0.00 0.00 1.85
7624 34332 0.527565 AATGAACCCGCATCAAGCAC 59.472 50.000 0.00 0.00 46.13 4.40
7674 34386 4.147322 GGACGACATTGCGTGCCG 62.147 66.667 10.13 0.00 45.17 5.69
7706 34418 5.230182 GGATTTTCTGAAAATTGCCGAAGT 58.770 37.500 24.57 4.96 40.97 3.01
7727 34439 7.743116 TGTAAATCTATTACAACTCAGGGGA 57.257 36.000 0.00 0.00 32.53 4.81
7753 34465 6.800072 TTTACAAAGACAGGGGACATTTTT 57.200 33.333 0.00 0.00 0.00 1.94
7818 34530 5.476945 ACAGTTAAAGATTTGGCTAGGGTTG 59.523 40.000 0.00 0.00 0.00 3.77
7842 34554 0.683828 ATTGGCCGCATCAATGGTGA 60.684 50.000 0.00 0.00 38.41 4.02
7845 34557 1.364901 GGATTGGCCGCATCAATGG 59.635 57.895 14.98 0.00 35.26 3.16
7847 34559 0.825010 GAGGGATTGGCCGCATCAAT 60.825 55.000 14.98 1.21 37.52 2.57
7892 34610 8.593945 AGGAAAAAGCTATACATGGAAATGAA 57.406 30.769 0.00 0.00 0.00 2.57
7989 34707 5.947228 TTTAGGAAAACAGCATGACTCTG 57.053 39.130 0.00 0.00 39.69 3.35
7990 34708 8.635765 TTATTTTAGGAAAACAGCATGACTCT 57.364 30.769 0.00 0.00 41.26 3.24
8009 34727 9.161629 CGGGCAGAAGGATTTTTATTTTATTTT 57.838 29.630 0.00 0.00 0.00 1.82
8011 34729 6.761242 GCGGGCAGAAGGATTTTTATTTTATT 59.239 34.615 0.00 0.00 0.00 1.40
8012 34730 6.098266 AGCGGGCAGAAGGATTTTTATTTTAT 59.902 34.615 0.00 0.00 0.00 1.40
8013 34731 5.420739 AGCGGGCAGAAGGATTTTTATTTTA 59.579 36.000 0.00 0.00 0.00 1.52
8017 34735 2.952310 GAGCGGGCAGAAGGATTTTTAT 59.048 45.455 0.00 0.00 0.00 1.40
8018 34736 2.365582 GAGCGGGCAGAAGGATTTTTA 58.634 47.619 0.00 0.00 0.00 1.52
8027 34745 4.697756 CAACGGGAGCGGGCAGAA 62.698 66.667 0.00 0.00 0.00 3.02
8029 34747 4.077184 TACAACGGGAGCGGGCAG 62.077 66.667 0.00 0.00 0.00 4.85
8030 34748 4.077184 CTACAACGGGAGCGGGCA 62.077 66.667 0.00 0.00 0.00 5.36
8031 34749 2.624437 CTACTACAACGGGAGCGGGC 62.624 65.000 0.00 0.00 0.00 6.13
8032 34750 1.436336 CTACTACAACGGGAGCGGG 59.564 63.158 0.00 0.00 0.00 6.13
8041 34953 0.179108 CTGCCTCCCGCTACTACAAC 60.179 60.000 0.00 0.00 38.78 3.32
8059 34999 2.359230 GGCGTCTTGCTGCTTCCT 60.359 61.111 0.00 0.00 45.43 3.36
8077 35017 1.376683 TAATGAGCGGGTGCACCAC 60.377 57.895 35.78 26.52 46.23 4.16
8078 35018 1.376683 GTAATGAGCGGGTGCACCA 60.377 57.895 35.78 16.88 46.23 4.17
8079 35019 2.112815 GGTAATGAGCGGGTGCACC 61.113 63.158 28.57 28.57 46.23 5.01
8082 35022 2.472909 GCAGGTAATGAGCGGGTGC 61.473 63.158 0.00 0.00 43.24 5.01
8095 35237 3.216292 GTTGGCCACGTTGCAGGT 61.216 61.111 3.88 0.00 0.00 4.00
8112 35254 1.200839 GACTTTCGTCGTGTTGGCG 59.799 57.895 0.00 0.00 0.00 5.69
8140 35282 0.037975 GCCAAATGCACCTCAACAGG 60.038 55.000 0.00 0.00 46.87 4.00
8196 35356 8.167605 TCAATGAATGAACATTTTTGCCAAAT 57.832 26.923 13.91 0.00 38.25 2.32
8226 35386 7.821595 TCATCTTTTCAAATGCATGAACATC 57.178 32.000 0.00 0.00 38.95 3.06
8421 35581 6.518493 ACGGTCTATTTTCAGTAACAACTCA 58.482 36.000 0.00 0.00 0.00 3.41
8440 35600 6.604735 ATGAGATTTGCAATAAGTACGGTC 57.395 37.500 0.00 0.00 0.00 4.79
8451 35611 8.530311 TCTGCCTATTAAAAATGAGATTTGCAA 58.470 29.630 0.00 0.00 31.77 4.08
8471 35631 3.851458 TCAGATTACATGCATCTGCCT 57.149 42.857 22.57 0.00 45.10 4.75
8474 35634 6.348295 GCTTACCATCAGATTACATGCATCTG 60.348 42.308 21.82 21.82 46.32 2.90
8490 35650 3.558109 GGAGATGCCCTTAGCTTACCATC 60.558 52.174 0.00 0.00 44.23 3.51
8491 35651 2.373502 GGAGATGCCCTTAGCTTACCAT 59.626 50.000 0.00 0.00 44.23 3.55
8492 35652 1.768870 GGAGATGCCCTTAGCTTACCA 59.231 52.381 0.00 0.00 44.23 3.25
8493 35653 1.768870 TGGAGATGCCCTTAGCTTACC 59.231 52.381 0.00 0.00 44.23 2.85
8494 35654 3.206964 GTTGGAGATGCCCTTAGCTTAC 58.793 50.000 0.00 0.00 44.23 2.34
8495 35655 2.158957 CGTTGGAGATGCCCTTAGCTTA 60.159 50.000 0.00 0.00 44.23 3.09
8496 35656 1.407437 CGTTGGAGATGCCCTTAGCTT 60.407 52.381 0.00 0.00 44.23 3.74
8497 35657 0.179000 CGTTGGAGATGCCCTTAGCT 59.821 55.000 0.00 0.00 44.23 3.32
8498 35658 0.107654 ACGTTGGAGATGCCCTTAGC 60.108 55.000 0.00 0.00 44.14 3.09
8499 35659 1.473434 GGACGTTGGAGATGCCCTTAG 60.473 57.143 0.00 0.00 34.97 2.18
8500 35660 0.539986 GGACGTTGGAGATGCCCTTA 59.460 55.000 0.00 0.00 34.97 2.69
8514 35674 7.495135 TTTTAGGAATTTTAAAGACGGACGT 57.505 32.000 0.00 0.00 0.00 4.34
8541 35701 8.559536 ACATCGCGTCAATGATTCTTTTATAAT 58.440 29.630 12.64 0.00 0.00 1.28
8544 35704 6.363577 ACATCGCGTCAATGATTCTTTTAT 57.636 33.333 12.64 0.00 0.00 1.40
8549 35709 1.854743 CGACATCGCGTCAATGATTCT 59.145 47.619 12.64 0.00 45.70 2.40
8550 35710 1.588404 ACGACATCGCGTCAATGATTC 59.412 47.619 12.64 1.04 45.70 2.52
8563 35723 6.592607 TCTTCCACTACCAAAATTACGACATC 59.407 38.462 0.00 0.00 0.00 3.06
8566 35726 6.036844 GGATCTTCCACTACCAAAATTACGAC 59.963 42.308 0.00 0.00 36.28 4.34
8570 35730 5.878116 CACGGATCTTCCACTACCAAAATTA 59.122 40.000 0.00 0.00 35.91 1.40
8580 35740 0.544357 TGGGACACGGATCTTCCACT 60.544 55.000 0.00 0.00 35.91 4.00
8581 35741 0.323629 TTGGGACACGGATCTTCCAC 59.676 55.000 0.00 0.00 39.29 4.02
8582 35742 2.766698 TTGGGACACGGATCTTCCA 58.233 52.632 0.00 0.00 39.29 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.