Multiple sequence alignment - TraesCS5B01G125600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G125600 chr5B 100.000 2345 0 0 1 2345 228498448 228496104 0.000000e+00 4331.0
1 TraesCS5B01G125600 chr5A 93.900 1672 57 22 98 1756 279102374 279100735 0.000000e+00 2481.0
2 TraesCS5B01G125600 chr5A 95.628 183 7 1 1780 1962 16574940 16574759 2.280000e-75 292.0
3 TraesCS5B01G125600 chr5A 94.444 54 3 0 2008 2061 279100667 279100614 1.490000e-12 84.2
4 TraesCS5B01G125600 chr5D 91.934 1686 52 23 98 1760 213946492 213944868 0.000000e+00 2283.0
5 TraesCS5B01G125600 chr5D 87.234 94 3 4 1980 2065 213944878 213944786 5.330000e-17 99.0
6 TraesCS5B01G125600 chr1B 93.893 262 4 1 2080 2329 410815303 410815042 3.660000e-103 385.0
7 TraesCS5B01G125600 chr1B 93.182 264 6 1 2079 2330 535027297 535027560 6.120000e-101 377.0
8 TraesCS5B01G125600 chr1B 92.803 264 7 1 2078 2329 22300529 22300266 2.850000e-99 372.0
9 TraesCS5B01G125600 chr4A 93.561 264 5 1 2079 2330 632238999 632239262 1.310000e-102 383.0
10 TraesCS5B01G125600 chr4A 90.234 256 18 4 2079 2328 633073851 633073597 6.250000e-86 327.0
11 TraesCS5B01G125600 chr1A 93.870 261 4 1 2080 2328 319336059 319336319 1.310000e-102 383.0
12 TraesCS5B01G125600 chr1A 97.959 98 1 1 1 98 547977589 547977685 4.010000e-38 169.0
13 TraesCS5B01G125600 chr7B 93.536 263 5 1 2079 2329 85305816 85306078 4.730000e-102 381.0
14 TraesCS5B01G125600 chr4B 93.511 262 5 1 2080 2329 596336977 596337238 1.700000e-101 379.0
15 TraesCS5B01G125600 chr4B 93.130 262 6 1 2080 2329 620197577 620197316 7.910000e-100 374.0
16 TraesCS5B01G125600 chr4B 91.353 266 11 1 2079 2332 557852640 557852905 1.030000e-93 353.0
17 TraesCS5B01G125600 chr4B 90.458 262 13 1 2080 2329 76127537 76127798 3.730000e-88 335.0
18 TraesCS5B01G125600 chr4B 95.082 183 8 1 1780 1962 209049833 209050014 1.060000e-73 287.0
19 TraesCS5B01G125600 chr4B 97.938 97 1 1 1 97 565859846 565859941 1.440000e-37 167.0
20 TraesCS5B01G125600 chr4B 96.907 97 2 1 1 97 139515974 139516069 6.710000e-36 161.0
21 TraesCS5B01G125600 chr6B 90.875 263 12 1 2079 2329 550777921 550778183 2.230000e-90 342.0
22 TraesCS5B01G125600 chr6B 89.057 265 13 3 2079 2331 665555195 665555455 4.860000e-82 315.0
23 TraesCS5B01G125600 chr6B 88.931 262 17 1 2080 2329 122672551 122672812 1.750000e-81 313.0
24 TraesCS5B01G125600 chr6B 88.593 263 18 1 2079 2329 677719936 677719674 2.260000e-80 309.0
25 TraesCS5B01G125600 chr6B 95.082 183 8 1 1780 1962 596654330 596654149 1.060000e-73 287.0
26 TraesCS5B01G125600 chr3A 88.973 263 17 1 2080 2330 726389298 726389560 4.860000e-82 315.0
27 TraesCS5B01G125600 chr3A 95.628 183 7 1 1780 1962 247673757 247673938 2.280000e-75 292.0
28 TraesCS5B01G125600 chrUn 95.628 183 7 1 1780 1962 229490357 229490538 2.280000e-75 292.0
29 TraesCS5B01G125600 chrUn 96.907 97 2 1 1 97 347666325 347666420 6.710000e-36 161.0
30 TraesCS5B01G125600 chr3B 95.628 183 7 1 1780 1962 483375294 483375475 2.280000e-75 292.0
31 TraesCS5B01G125600 chr3B 95.082 183 8 1 1780 1962 575766444 575766263 1.060000e-73 287.0
32 TraesCS5B01G125600 chr2B 95.109 184 7 2 1780 1962 357691023 357690841 2.950000e-74 289.0
33 TraesCS5B01G125600 chr7A 95.082 183 8 1 1780 1962 60326030 60325849 1.060000e-73 287.0
34 TraesCS5B01G125600 chr7A 97.938 97 1 1 1 97 697114646 697114551 1.440000e-37 167.0
35 TraesCS5B01G125600 chr7A 95.192 104 3 2 1 104 225636674 225636573 1.860000e-36 163.0
36 TraesCS5B01G125600 chr7A 96.907 97 2 1 1 97 41987956 41987861 6.710000e-36 161.0
37 TraesCS5B01G125600 chr7A 96.907 97 2 1 1 97 348216137 348216042 6.710000e-36 161.0
38 TraesCS5B01G125600 chr1D 88.793 232 14 1 2110 2329 37191050 37190819 8.260000e-70 274.0
39 TraesCS5B01G125600 chr2A 97.938 97 1 1 1 97 734884415 734884320 1.440000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G125600 chr5B 228496104 228498448 2344 True 4331.0 4331 100.000 1 2345 1 chr5B.!!$R1 2344
1 TraesCS5B01G125600 chr5A 279100614 279102374 1760 True 1282.6 2481 94.172 98 2061 2 chr5A.!!$R2 1963
2 TraesCS5B01G125600 chr5D 213944786 213946492 1706 True 1191.0 2283 89.584 98 2065 2 chr5D.!!$R1 1967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
743 749 0.183731 CTCCTATGCTTGGAACCCCC 59.816 60.0 0.0 0.0 32.61 5.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1786 0.105964 CCCTCCGAATCCCTCAGAGA 60.106 60.0 0.0 0.0 31.03 3.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.267961 GCCGGTTGGGGACACTAG 59.732 66.667 1.90 0.00 42.67 2.57
19 20 2.267961 CCGGTTGGGGACACTAGC 59.732 66.667 0.00 0.00 42.67 3.42
20 21 2.589157 CCGGTTGGGGACACTAGCA 61.589 63.158 0.00 0.00 42.67 3.49
21 22 1.602237 CGGTTGGGGACACTAGCAT 59.398 57.895 0.00 0.00 42.67 3.79
22 23 0.744414 CGGTTGGGGACACTAGCATG 60.744 60.000 0.00 0.00 42.67 4.06
23 24 0.328258 GGTTGGGGACACTAGCATGT 59.672 55.000 0.00 0.00 42.67 3.21
24 25 1.453155 GTTGGGGACACTAGCATGTG 58.547 55.000 7.43 7.43 42.67 3.21
25 26 0.327924 TTGGGGACACTAGCATGTGG 59.672 55.000 12.54 0.00 42.67 4.17
26 27 1.224592 GGGGACACTAGCATGTGGG 59.775 63.158 12.54 0.00 41.84 4.61
27 28 1.224592 GGGACACTAGCATGTGGGG 59.775 63.158 12.54 0.00 41.84 4.96
28 29 1.562672 GGGACACTAGCATGTGGGGT 61.563 60.000 12.54 0.00 41.84 4.95
29 30 0.328258 GGACACTAGCATGTGGGGTT 59.672 55.000 12.54 0.00 41.84 4.11
30 31 1.453155 GACACTAGCATGTGGGGTTG 58.547 55.000 12.54 0.00 41.84 3.77
31 32 1.003118 GACACTAGCATGTGGGGTTGA 59.997 52.381 12.54 0.00 41.84 3.18
32 33 1.635487 ACACTAGCATGTGGGGTTGAT 59.365 47.619 12.54 0.00 41.84 2.57
33 34 2.041620 ACACTAGCATGTGGGGTTGATT 59.958 45.455 12.54 0.00 41.84 2.57
34 35 2.684881 CACTAGCATGTGGGGTTGATTC 59.315 50.000 0.00 0.00 34.56 2.52
35 36 2.308570 ACTAGCATGTGGGGTTGATTCA 59.691 45.455 0.00 0.00 0.00 2.57
36 37 1.549203 AGCATGTGGGGTTGATTCAC 58.451 50.000 0.00 0.00 0.00 3.18
37 38 1.203038 AGCATGTGGGGTTGATTCACA 60.203 47.619 0.00 0.00 44.12 3.58
38 39 1.203052 GCATGTGGGGTTGATTCACAG 59.797 52.381 0.00 0.00 43.39 3.66
39 40 1.203052 CATGTGGGGTTGATTCACAGC 59.797 52.381 0.00 0.00 43.39 4.40
40 41 0.888736 TGTGGGGTTGATTCACAGCG 60.889 55.000 0.00 0.00 36.61 5.18
41 42 0.605319 GTGGGGTTGATTCACAGCGA 60.605 55.000 0.00 0.00 0.00 4.93
42 43 0.321564 TGGGGTTGATTCACAGCGAG 60.322 55.000 0.00 0.00 0.00 5.03
43 44 1.648467 GGGGTTGATTCACAGCGAGC 61.648 60.000 0.00 0.00 0.00 5.03
44 45 1.648467 GGGTTGATTCACAGCGAGCC 61.648 60.000 0.00 0.00 0.00 4.70
45 46 1.648467 GGTTGATTCACAGCGAGCCC 61.648 60.000 0.00 0.00 0.00 5.19
46 47 0.955428 GTTGATTCACAGCGAGCCCA 60.955 55.000 0.00 0.00 0.00 5.36
47 48 0.955428 TTGATTCACAGCGAGCCCAC 60.955 55.000 0.00 0.00 0.00 4.61
48 49 2.045926 ATTCACAGCGAGCCCACC 60.046 61.111 0.00 0.00 0.00 4.61
49 50 2.527951 GATTCACAGCGAGCCCACCT 62.528 60.000 0.00 0.00 0.00 4.00
50 51 2.809861 ATTCACAGCGAGCCCACCTG 62.810 60.000 0.00 0.00 0.00 4.00
51 52 4.320456 CACAGCGAGCCCACCTGT 62.320 66.667 0.00 0.00 40.22 4.00
52 53 4.008933 ACAGCGAGCCCACCTGTC 62.009 66.667 0.00 0.00 34.99 3.51
53 54 4.007644 CAGCGAGCCCACCTGTCA 62.008 66.667 0.00 0.00 0.00 3.58
54 55 3.241530 AGCGAGCCCACCTGTCAA 61.242 61.111 0.00 0.00 0.00 3.18
55 56 2.045926 GCGAGCCCACCTGTCAAT 60.046 61.111 0.00 0.00 0.00 2.57
56 57 2.109126 GCGAGCCCACCTGTCAATC 61.109 63.158 0.00 0.00 0.00 2.67
57 58 1.811266 CGAGCCCACCTGTCAATCG 60.811 63.158 0.00 0.00 0.00 3.34
58 59 2.045926 AGCCCACCTGTCAATCGC 60.046 61.111 0.00 0.00 0.00 4.58
59 60 3.134127 GCCCACCTGTCAATCGCC 61.134 66.667 0.00 0.00 0.00 5.54
60 61 2.819595 CCCACCTGTCAATCGCCG 60.820 66.667 0.00 0.00 0.00 6.46
61 62 2.264480 CCACCTGTCAATCGCCGA 59.736 61.111 0.00 0.00 0.00 5.54
62 63 1.375396 CCACCTGTCAATCGCCGAA 60.375 57.895 0.00 0.00 0.00 4.30
63 64 1.635663 CCACCTGTCAATCGCCGAAC 61.636 60.000 0.00 0.00 0.00 3.95
64 65 1.736645 ACCTGTCAATCGCCGAACG 60.737 57.895 0.00 0.00 45.62 3.95
65 66 2.452813 CCTGTCAATCGCCGAACGG 61.453 63.158 9.00 9.00 43.89 4.44
90 91 4.899239 CCGCACGGCAGAGGATCC 62.899 72.222 2.48 2.48 33.66 3.36
95 96 4.933064 CGGCAGAGGATCCGCGTC 62.933 72.222 10.07 5.91 39.14 5.19
96 97 4.593864 GGCAGAGGATCCGCGTCC 62.594 72.222 10.07 11.09 38.62 4.79
168 169 4.161001 GGAATTCAATGGACTGCAGGATTT 59.839 41.667 19.93 6.92 0.00 2.17
391 392 0.451628 CAAGATGTTGACACTGCGCG 60.452 55.000 0.00 0.00 35.46 6.86
442 444 2.881266 CGCGCCATGAATACACCCG 61.881 63.158 0.00 0.00 0.00 5.28
468 470 5.217895 GGCAACCACGAAAATAAGAGTAG 57.782 43.478 0.00 0.00 0.00 2.57
474 476 8.717821 CAACCACGAAAATAAGAGTAGATTTGA 58.282 33.333 0.00 0.00 0.00 2.69
500 502 3.820467 CACAAATGTGTCTAGCTTCCCAA 59.180 43.478 5.38 0.00 40.96 4.12
502 504 2.386661 ATGTGTCTAGCTTCCCAACG 57.613 50.000 0.00 0.00 0.00 4.10
510 512 5.241064 TGTCTAGCTTCCCAACGTATAGATC 59.759 44.000 0.00 0.00 0.00 2.75
528 530 4.375313 AGATCTCCCCTGTTTTCCTGTAT 58.625 43.478 0.00 0.00 0.00 2.29
645 651 1.080498 AGTAGGGTTGGAGGGATGTGA 59.920 52.381 0.00 0.00 0.00 3.58
743 749 0.183731 CTCCTATGCTTGGAACCCCC 59.816 60.000 0.00 0.00 32.61 5.40
868 879 2.693074 TGCTTTTCCTTGTGTTCTTCCC 59.307 45.455 0.00 0.00 0.00 3.97
889 906 4.388485 CCCATGTATGTTATGCAGCAGTA 58.612 43.478 0.00 0.00 0.00 2.74
894 911 5.977635 TGTATGTTATGCAGCAGTACTTCT 58.022 37.500 0.00 0.00 0.00 2.85
895 912 7.107639 TGTATGTTATGCAGCAGTACTTCTA 57.892 36.000 0.00 0.00 0.00 2.10
896 913 7.726216 TGTATGTTATGCAGCAGTACTTCTAT 58.274 34.615 0.00 0.00 0.00 1.98
897 914 8.856103 TGTATGTTATGCAGCAGTACTTCTATA 58.144 33.333 0.00 0.00 0.00 1.31
908 925 7.962934 GCAGTACTTCTATATATTCTGCTCG 57.037 40.000 0.00 0.00 42.16 5.03
909 926 7.531716 GCAGTACTTCTATATATTCTGCTCGT 58.468 38.462 0.00 0.00 42.16 4.18
917 934 8.622948 TCTATATATTCTGCTCGTCTGAAGAA 57.377 34.615 0.00 0.00 36.33 2.52
923 940 5.644977 TCTGCTCGTCTGAAGAAGAAATA 57.355 39.130 0.00 0.00 36.40 1.40
925 942 7.334844 TCTGCTCGTCTGAAGAAGAAATATA 57.665 36.000 0.00 0.00 36.40 0.86
926 943 7.946207 TCTGCTCGTCTGAAGAAGAAATATAT 58.054 34.615 0.00 0.00 36.40 0.86
927 944 8.417106 TCTGCTCGTCTGAAGAAGAAATATATT 58.583 33.333 0.00 0.00 36.40 1.28
928 945 8.581057 TGCTCGTCTGAAGAAGAAATATATTC 57.419 34.615 0.00 0.00 36.40 1.75
929 946 8.417106 TGCTCGTCTGAAGAAGAAATATATTCT 58.583 33.333 0.00 0.00 38.73 2.40
930 947 8.698854 GCTCGTCTGAAGAAGAAATATATTCTG 58.301 37.037 0.00 0.00 37.20 3.02
931 948 9.958234 CTCGTCTGAAGAAGAAATATATTCTGA 57.042 33.333 0.00 0.00 37.20 3.27
1350 1367 1.336240 GGCAAGCGCAAGTGAAGAAAT 60.336 47.619 11.47 0.00 41.24 2.17
1480 1500 0.475632 ATCCACTGGACAGGGTTGGA 60.476 55.000 11.18 11.18 36.13 3.53
1541 1561 0.175302 TTTGTGTTGCTGGGTTGCAG 59.825 50.000 0.00 0.00 44.27 4.41
1565 1585 3.427098 GGGTTGGTCAGTTTAATTAGCGC 60.427 47.826 0.00 0.00 0.00 5.92
1645 1665 3.719924 TGTTTGCTGAAGAAATGCAAGG 58.280 40.909 0.00 0.00 45.52 3.61
1752 1773 6.451064 TTCTGGTTTTTCTTCAAGGACTTC 57.549 37.500 0.00 0.00 0.00 3.01
1756 1777 7.777910 TCTGGTTTTTCTTCAAGGACTTCATTA 59.222 33.333 0.00 0.00 0.00 1.90
1757 1778 7.940850 TGGTTTTTCTTCAAGGACTTCATTAG 58.059 34.615 0.00 0.00 0.00 1.73
1758 1779 7.014230 TGGTTTTTCTTCAAGGACTTCATTAGG 59.986 37.037 0.00 0.00 0.00 2.69
1762 1783 8.533569 TTTCTTCAAGGACTTCATTAGGTTTT 57.466 30.769 0.00 0.00 0.00 2.43
1763 1784 8.533569 TTCTTCAAGGACTTCATTAGGTTTTT 57.466 30.769 0.00 0.00 0.00 1.94
1764 1785 8.166422 TCTTCAAGGACTTCATTAGGTTTTTC 57.834 34.615 0.00 0.00 0.00 2.29
1765 1786 7.998964 TCTTCAAGGACTTCATTAGGTTTTTCT 59.001 33.333 0.00 0.00 0.00 2.52
1766 1787 7.745620 TCAAGGACTTCATTAGGTTTTTCTC 57.254 36.000 0.00 0.00 0.00 2.87
1767 1788 7.518188 TCAAGGACTTCATTAGGTTTTTCTCT 58.482 34.615 0.00 0.00 0.00 3.10
1768 1789 7.661847 TCAAGGACTTCATTAGGTTTTTCTCTC 59.338 37.037 0.00 0.00 0.00 3.20
1769 1790 7.323052 AGGACTTCATTAGGTTTTTCTCTCT 57.677 36.000 0.00 0.00 0.00 3.10
1770 1791 7.164803 AGGACTTCATTAGGTTTTTCTCTCTG 58.835 38.462 0.00 0.00 0.00 3.35
1771 1792 7.016661 AGGACTTCATTAGGTTTTTCTCTCTGA 59.983 37.037 0.00 0.00 0.00 3.27
1772 1793 7.333174 GGACTTCATTAGGTTTTTCTCTCTGAG 59.667 40.741 0.00 0.00 0.00 3.35
1773 1794 7.164803 ACTTCATTAGGTTTTTCTCTCTGAGG 58.835 38.462 4.59 0.00 0.00 3.86
1774 1795 6.054860 TCATTAGGTTTTTCTCTCTGAGGG 57.945 41.667 4.59 0.43 0.00 4.30
1775 1796 5.785423 TCATTAGGTTTTTCTCTCTGAGGGA 59.215 40.000 2.35 2.35 0.00 4.20
1776 1797 6.445139 TCATTAGGTTTTTCTCTCTGAGGGAT 59.555 38.462 8.30 0.00 0.00 3.85
1777 1798 6.704056 TTAGGTTTTTCTCTCTGAGGGATT 57.296 37.500 8.30 0.00 0.00 3.01
1778 1799 5.172687 AGGTTTTTCTCTCTGAGGGATTC 57.827 43.478 8.30 0.00 0.00 2.52
1779 1800 3.935828 GGTTTTTCTCTCTGAGGGATTCG 59.064 47.826 8.30 0.00 0.00 3.34
1780 1801 3.895232 TTTTCTCTCTGAGGGATTCGG 57.105 47.619 8.30 0.00 0.00 4.30
1781 1802 2.828661 TTCTCTCTGAGGGATTCGGA 57.171 50.000 8.30 0.00 38.90 4.55
1784 1805 4.707584 TCTGAGGGATTCGGAGGG 57.292 61.111 0.00 0.00 36.26 4.30
1785 1806 2.015921 TCTGAGGGATTCGGAGGGA 58.984 57.895 0.00 0.00 36.26 4.20
1786 1807 0.338467 TCTGAGGGATTCGGAGGGAA 59.662 55.000 0.00 0.00 36.26 3.97
1787 1808 1.204146 CTGAGGGATTCGGAGGGAAA 58.796 55.000 0.00 0.00 38.36 3.13
1788 1809 1.771255 CTGAGGGATTCGGAGGGAAAT 59.229 52.381 0.00 0.00 38.36 2.17
1789 1810 2.173569 CTGAGGGATTCGGAGGGAAATT 59.826 50.000 0.00 0.00 38.36 1.82
1790 1811 3.389866 TGAGGGATTCGGAGGGAAATTA 58.610 45.455 0.00 0.00 38.36 1.40
1791 1812 3.391296 TGAGGGATTCGGAGGGAAATTAG 59.609 47.826 0.00 0.00 38.36 1.73
1792 1813 2.711547 AGGGATTCGGAGGGAAATTAGG 59.288 50.000 0.00 0.00 38.36 2.69
1793 1814 2.442126 GGGATTCGGAGGGAAATTAGGT 59.558 50.000 0.00 0.00 38.36 3.08
1794 1815 3.117625 GGGATTCGGAGGGAAATTAGGTT 60.118 47.826 0.00 0.00 38.36 3.50
1795 1816 3.883489 GGATTCGGAGGGAAATTAGGTTG 59.117 47.826 0.00 0.00 38.36 3.77
1796 1817 3.359695 TTCGGAGGGAAATTAGGTTGG 57.640 47.619 0.00 0.00 0.00 3.77
1797 1818 1.064979 TCGGAGGGAAATTAGGTTGGC 60.065 52.381 0.00 0.00 0.00 4.52
1798 1819 1.776662 GGAGGGAAATTAGGTTGGCC 58.223 55.000 0.00 0.00 0.00 5.36
1799 1820 1.006639 GGAGGGAAATTAGGTTGGCCA 59.993 52.381 0.00 0.00 37.19 5.36
1800 1821 2.100197 GAGGGAAATTAGGTTGGCCAC 58.900 52.381 3.88 0.00 37.19 5.01
1810 1831 2.909965 TTGGCCACCAACTTCGCC 60.910 61.111 3.88 0.00 38.75 5.54
1811 1832 3.429372 TTGGCCACCAACTTCGCCT 62.429 57.895 3.88 0.00 38.75 5.52
1812 1833 3.365265 GGCCACCAACTTCGCCTG 61.365 66.667 0.00 0.00 38.41 4.85
1813 1834 4.043200 GCCACCAACTTCGCCTGC 62.043 66.667 0.00 0.00 0.00 4.85
1814 1835 3.365265 CCACCAACTTCGCCTGCC 61.365 66.667 0.00 0.00 0.00 4.85
1815 1836 2.281761 CACCAACTTCGCCTGCCT 60.282 61.111 0.00 0.00 0.00 4.75
1816 1837 1.898574 CACCAACTTCGCCTGCCTT 60.899 57.895 0.00 0.00 0.00 4.35
1817 1838 1.152756 ACCAACTTCGCCTGCCTTT 60.153 52.632 0.00 0.00 0.00 3.11
1818 1839 1.172812 ACCAACTTCGCCTGCCTTTC 61.173 55.000 0.00 0.00 0.00 2.62
1819 1840 0.890996 CCAACTTCGCCTGCCTTTCT 60.891 55.000 0.00 0.00 0.00 2.52
1820 1841 1.610624 CCAACTTCGCCTGCCTTTCTA 60.611 52.381 0.00 0.00 0.00 2.10
1821 1842 2.359900 CAACTTCGCCTGCCTTTCTAT 58.640 47.619 0.00 0.00 0.00 1.98
1822 1843 2.317530 ACTTCGCCTGCCTTTCTATC 57.682 50.000 0.00 0.00 0.00 2.08
1823 1844 1.134371 ACTTCGCCTGCCTTTCTATCC 60.134 52.381 0.00 0.00 0.00 2.59
1824 1845 0.179084 TTCGCCTGCCTTTCTATCCG 60.179 55.000 0.00 0.00 0.00 4.18
1825 1846 1.040893 TCGCCTGCCTTTCTATCCGA 61.041 55.000 0.00 0.00 0.00 4.55
1826 1847 0.598680 CGCCTGCCTTTCTATCCGAG 60.599 60.000 0.00 0.00 0.00 4.63
1827 1848 0.466124 GCCTGCCTTTCTATCCGAGT 59.534 55.000 0.00 0.00 0.00 4.18
1828 1849 1.134371 GCCTGCCTTTCTATCCGAGTT 60.134 52.381 0.00 0.00 0.00 3.01
1829 1850 2.827652 CCTGCCTTTCTATCCGAGTTC 58.172 52.381 0.00 0.00 0.00 3.01
1830 1851 2.432510 CCTGCCTTTCTATCCGAGTTCT 59.567 50.000 0.00 0.00 0.00 3.01
1831 1852 3.118592 CCTGCCTTTCTATCCGAGTTCTT 60.119 47.826 0.00 0.00 0.00 2.52
1832 1853 4.116238 CTGCCTTTCTATCCGAGTTCTTC 58.884 47.826 0.00 0.00 0.00 2.87
1833 1854 3.118738 TGCCTTTCTATCCGAGTTCTTCC 60.119 47.826 0.00 0.00 0.00 3.46
1834 1855 3.741700 GCCTTTCTATCCGAGTTCTTCCC 60.742 52.174 0.00 0.00 0.00 3.97
1835 1856 3.707102 CCTTTCTATCCGAGTTCTTCCCT 59.293 47.826 0.00 0.00 0.00 4.20
1836 1857 4.202172 CCTTTCTATCCGAGTTCTTCCCTC 60.202 50.000 0.00 0.00 0.00 4.30
1837 1858 3.955524 TCTATCCGAGTTCTTCCCTCT 57.044 47.619 0.00 0.00 0.00 3.69
1838 1859 4.252570 TCTATCCGAGTTCTTCCCTCTT 57.747 45.455 0.00 0.00 0.00 2.85
1839 1860 3.954904 TCTATCCGAGTTCTTCCCTCTTG 59.045 47.826 0.00 0.00 0.00 3.02
1840 1861 2.304221 TCCGAGTTCTTCCCTCTTGA 57.696 50.000 0.00 0.00 0.00 3.02
1841 1862 2.821437 TCCGAGTTCTTCCCTCTTGAT 58.179 47.619 0.00 0.00 0.00 2.57
1842 1863 2.497675 TCCGAGTTCTTCCCTCTTGATG 59.502 50.000 0.00 0.00 0.00 3.07
1843 1864 2.275318 CGAGTTCTTCCCTCTTGATGC 58.725 52.381 0.00 0.00 0.00 3.91
1844 1865 2.093764 CGAGTTCTTCCCTCTTGATGCT 60.094 50.000 0.00 0.00 0.00 3.79
1845 1866 3.618507 CGAGTTCTTCCCTCTTGATGCTT 60.619 47.826 0.00 0.00 0.00 3.91
1846 1867 4.331108 GAGTTCTTCCCTCTTGATGCTTT 58.669 43.478 0.00 0.00 0.00 3.51
1847 1868 4.734266 AGTTCTTCCCTCTTGATGCTTTT 58.266 39.130 0.00 0.00 0.00 2.27
1848 1869 4.522022 AGTTCTTCCCTCTTGATGCTTTTG 59.478 41.667 0.00 0.00 0.00 2.44
1849 1870 4.371624 TCTTCCCTCTTGATGCTTTTGA 57.628 40.909 0.00 0.00 0.00 2.69
1850 1871 4.728772 TCTTCCCTCTTGATGCTTTTGAA 58.271 39.130 0.00 0.00 0.00 2.69
1851 1872 4.520492 TCTTCCCTCTTGATGCTTTTGAAC 59.480 41.667 0.00 0.00 0.00 3.18
1852 1873 2.813754 TCCCTCTTGATGCTTTTGAACG 59.186 45.455 0.00 0.00 0.00 3.95
1853 1874 2.813754 CCCTCTTGATGCTTTTGAACGA 59.186 45.455 0.00 0.00 0.00 3.85
1854 1875 3.365364 CCCTCTTGATGCTTTTGAACGAC 60.365 47.826 0.00 0.00 0.00 4.34
1855 1876 3.499918 CCTCTTGATGCTTTTGAACGACT 59.500 43.478 0.00 0.00 0.00 4.18
1856 1877 4.377841 CCTCTTGATGCTTTTGAACGACTC 60.378 45.833 0.00 0.00 0.00 3.36
1857 1878 3.498397 TCTTGATGCTTTTGAACGACTCC 59.502 43.478 0.00 0.00 0.00 3.85
1858 1879 3.126001 TGATGCTTTTGAACGACTCCT 57.874 42.857 0.00 0.00 0.00 3.69
1859 1880 4.265904 TGATGCTTTTGAACGACTCCTA 57.734 40.909 0.00 0.00 0.00 2.94
1860 1881 4.637276 TGATGCTTTTGAACGACTCCTAA 58.363 39.130 0.00 0.00 0.00 2.69
1861 1882 5.060506 TGATGCTTTTGAACGACTCCTAAA 58.939 37.500 0.00 0.00 0.00 1.85
1862 1883 5.705441 TGATGCTTTTGAACGACTCCTAAAT 59.295 36.000 0.00 0.00 0.00 1.40
1863 1884 6.206634 TGATGCTTTTGAACGACTCCTAAATT 59.793 34.615 0.00 0.00 0.00 1.82
1864 1885 6.385649 TGCTTTTGAACGACTCCTAAATTT 57.614 33.333 0.00 0.00 0.00 1.82
1865 1886 6.435428 TGCTTTTGAACGACTCCTAAATTTC 58.565 36.000 0.00 0.00 0.00 2.17
1866 1887 6.038825 TGCTTTTGAACGACTCCTAAATTTCA 59.961 34.615 0.00 0.00 0.00 2.69
1867 1888 6.359883 GCTTTTGAACGACTCCTAAATTTCAC 59.640 38.462 0.00 0.00 0.00 3.18
1868 1889 6.928979 TTTGAACGACTCCTAAATTTCACA 57.071 33.333 0.00 0.00 0.00 3.58
1869 1890 6.928979 TTGAACGACTCCTAAATTTCACAA 57.071 33.333 0.00 0.00 0.00 3.33
1870 1891 6.928979 TGAACGACTCCTAAATTTCACAAA 57.071 33.333 0.00 0.00 0.00 2.83
1871 1892 7.323049 TGAACGACTCCTAAATTTCACAAAA 57.677 32.000 0.00 0.00 0.00 2.44
1872 1893 7.936584 TGAACGACTCCTAAATTTCACAAAAT 58.063 30.769 0.00 0.00 36.64 1.82
1873 1894 8.073768 TGAACGACTCCTAAATTTCACAAAATC 58.926 33.333 0.00 0.00 33.93 2.17
1874 1895 6.909909 ACGACTCCTAAATTTCACAAAATCC 58.090 36.000 0.00 0.00 33.93 3.01
1875 1896 6.715264 ACGACTCCTAAATTTCACAAAATCCT 59.285 34.615 0.00 0.00 33.93 3.24
1876 1897 7.230712 ACGACTCCTAAATTTCACAAAATCCTT 59.769 33.333 0.00 0.00 33.93 3.36
1877 1898 8.082242 CGACTCCTAAATTTCACAAAATCCTTT 58.918 33.333 0.00 0.00 33.93 3.11
1878 1899 9.764363 GACTCCTAAATTTCACAAAATCCTTTT 57.236 29.630 0.00 0.00 33.93 2.27
1910 1931 7.437793 TTTGAAATCCAAATCAAAATGCCTC 57.562 32.000 0.00 0.00 41.26 4.70
1911 1932 6.111669 TGAAATCCAAATCAAAATGCCTCA 57.888 33.333 0.00 0.00 0.00 3.86
1912 1933 6.531923 TGAAATCCAAATCAAAATGCCTCAA 58.468 32.000 0.00 0.00 0.00 3.02
1913 1934 6.427547 TGAAATCCAAATCAAAATGCCTCAAC 59.572 34.615 0.00 0.00 0.00 3.18
1914 1935 5.750352 ATCCAAATCAAAATGCCTCAACT 57.250 34.783 0.00 0.00 0.00 3.16
1915 1936 5.549742 TCCAAATCAAAATGCCTCAACTT 57.450 34.783 0.00 0.00 0.00 2.66
1916 1937 5.299148 TCCAAATCAAAATGCCTCAACTTG 58.701 37.500 0.00 0.00 0.00 3.16
1917 1938 5.070180 TCCAAATCAAAATGCCTCAACTTGA 59.930 36.000 0.00 0.00 0.00 3.02
1918 1939 5.935789 CCAAATCAAAATGCCTCAACTTGAT 59.064 36.000 0.00 0.00 38.14 2.57
1919 1940 7.039152 TCCAAATCAAAATGCCTCAACTTGATA 60.039 33.333 0.00 0.00 36.07 2.15
1920 1941 7.603404 CCAAATCAAAATGCCTCAACTTGATAA 59.397 33.333 0.00 0.00 36.07 1.75
1921 1942 8.991026 CAAATCAAAATGCCTCAACTTGATAAA 58.009 29.630 0.00 0.00 36.07 1.40
1922 1943 9.729281 AAATCAAAATGCCTCAACTTGATAAAT 57.271 25.926 0.00 0.00 36.07 1.40
1923 1944 9.729281 AATCAAAATGCCTCAACTTGATAAATT 57.271 25.926 0.00 0.00 36.07 1.82
1949 1970 8.697507 AACTTATTTCTCACAATTCTTCTGGT 57.302 30.769 0.00 0.00 0.00 4.00
1950 1971 8.697507 ACTTATTTCTCACAATTCTTCTGGTT 57.302 30.769 0.00 0.00 0.00 3.67
1951 1972 9.793259 ACTTATTTCTCACAATTCTTCTGGTTA 57.207 29.630 0.00 0.00 0.00 2.85
1953 1974 7.693969 ATTTCTCACAATTCTTCTGGTTAGG 57.306 36.000 0.00 0.00 0.00 2.69
1954 1975 5.825593 TCTCACAATTCTTCTGGTTAGGT 57.174 39.130 0.00 0.00 0.00 3.08
1955 1976 6.187727 TCTCACAATTCTTCTGGTTAGGTT 57.812 37.500 0.00 0.00 0.00 3.50
1956 1977 6.601332 TCTCACAATTCTTCTGGTTAGGTTT 58.399 36.000 0.00 0.00 0.00 3.27
1957 1978 7.060421 TCTCACAATTCTTCTGGTTAGGTTTT 58.940 34.615 0.00 0.00 0.00 2.43
1958 1979 7.559897 TCTCACAATTCTTCTGGTTAGGTTTTT 59.440 33.333 0.00 0.00 0.00 1.94
1959 1980 7.712797 TCACAATTCTTCTGGTTAGGTTTTTC 58.287 34.615 0.00 0.00 0.00 2.29
1960 1981 7.559897 TCACAATTCTTCTGGTTAGGTTTTTCT 59.440 33.333 0.00 0.00 0.00 2.52
1961 1982 7.862873 CACAATTCTTCTGGTTAGGTTTTTCTC 59.137 37.037 0.00 0.00 0.00 2.87
1962 1983 7.780271 ACAATTCTTCTGGTTAGGTTTTTCTCT 59.220 33.333 0.00 0.00 0.00 3.10
1963 1984 9.284968 CAATTCTTCTGGTTAGGTTTTTCTCTA 57.715 33.333 0.00 0.00 0.00 2.43
1965 1986 8.848474 TTCTTCTGGTTAGGTTTTTCTCTATG 57.152 34.615 0.00 0.00 0.00 2.23
1994 2015 3.137728 TCAAGGGCTTAATTAGGTAGGGC 59.862 47.826 0.00 0.00 0.00 5.19
2051 2096 3.485463 ACTAGCTGCCAAGTTAACACA 57.515 42.857 8.61 0.00 0.00 3.72
2085 2130 7.734942 AGTACTAGTACTACTGTGATACTCCC 58.265 42.308 29.96 0.90 43.98 4.30
2086 2131 6.828307 ACTAGTACTACTGTGATACTCCCT 57.172 41.667 0.00 0.00 31.65 4.20
2087 2132 6.829849 ACTAGTACTACTGTGATACTCCCTC 58.170 44.000 0.00 0.00 31.65 4.30
2088 2133 5.051409 AGTACTACTGTGATACTCCCTCC 57.949 47.826 0.00 0.00 0.00 4.30
2089 2134 4.477581 AGTACTACTGTGATACTCCCTCCA 59.522 45.833 0.00 0.00 0.00 3.86
2090 2135 4.544564 ACTACTGTGATACTCCCTCCAT 57.455 45.455 0.00 0.00 0.00 3.41
2091 2136 4.884961 ACTACTGTGATACTCCCTCCATT 58.115 43.478 0.00 0.00 0.00 3.16
2092 2137 4.896482 ACTACTGTGATACTCCCTCCATTC 59.104 45.833 0.00 0.00 0.00 2.67
2093 2138 3.041946 ACTGTGATACTCCCTCCATTCC 58.958 50.000 0.00 0.00 0.00 3.01
2094 2139 3.041211 CTGTGATACTCCCTCCATTCCA 58.959 50.000 0.00 0.00 0.00 3.53
2095 2140 2.771943 TGTGATACTCCCTCCATTCCAC 59.228 50.000 0.00 0.00 0.00 4.02
2096 2141 2.771943 GTGATACTCCCTCCATTCCACA 59.228 50.000 0.00 0.00 0.00 4.17
2097 2142 3.199946 GTGATACTCCCTCCATTCCACAA 59.800 47.826 0.00 0.00 0.00 3.33
2098 2143 4.047166 TGATACTCCCTCCATTCCACAAT 58.953 43.478 0.00 0.00 0.00 2.71
2099 2144 2.814805 ACTCCCTCCATTCCACAATG 57.185 50.000 0.00 0.00 39.45 2.82
2100 2145 1.995542 ACTCCCTCCATTCCACAATGT 59.004 47.619 0.00 0.00 38.22 2.71
2101 2146 3.189606 ACTCCCTCCATTCCACAATGTA 58.810 45.455 0.00 0.00 38.22 2.29
2102 2147 3.200825 ACTCCCTCCATTCCACAATGTAG 59.799 47.826 0.00 0.00 38.22 2.74
2103 2148 3.189606 TCCCTCCATTCCACAATGTAGT 58.810 45.455 0.00 0.00 38.22 2.73
2104 2149 3.054434 TCCCTCCATTCCACAATGTAGTG 60.054 47.826 0.00 0.00 38.22 2.74
2105 2150 2.684881 CCTCCATTCCACAATGTAGTGC 59.315 50.000 0.00 0.00 38.22 4.40
2106 2151 2.684881 CTCCATTCCACAATGTAGTGCC 59.315 50.000 0.00 0.00 38.22 5.01
2107 2152 2.308570 TCCATTCCACAATGTAGTGCCT 59.691 45.455 0.00 0.00 38.22 4.75
2108 2153 3.521531 TCCATTCCACAATGTAGTGCCTA 59.478 43.478 0.00 0.00 38.22 3.93
2109 2154 4.165950 TCCATTCCACAATGTAGTGCCTAT 59.834 41.667 0.00 0.00 38.22 2.57
2110 2155 5.368230 TCCATTCCACAATGTAGTGCCTATA 59.632 40.000 0.00 0.00 38.22 1.31
2111 2156 5.702670 CCATTCCACAATGTAGTGCCTATAG 59.297 44.000 0.00 0.00 38.22 1.31
2112 2157 6.464322 CCATTCCACAATGTAGTGCCTATAGA 60.464 42.308 0.00 0.00 38.22 1.98
2113 2158 6.747414 TTCCACAATGTAGTGCCTATAGAT 57.253 37.500 0.00 0.00 38.18 1.98
2114 2159 6.747414 TCCACAATGTAGTGCCTATAGATT 57.253 37.500 0.00 0.00 38.18 2.40
2115 2160 7.136822 TCCACAATGTAGTGCCTATAGATTT 57.863 36.000 0.00 0.00 38.18 2.17
2116 2161 7.573710 TCCACAATGTAGTGCCTATAGATTTT 58.426 34.615 0.00 0.00 38.18 1.82
2117 2162 8.052748 TCCACAATGTAGTGCCTATAGATTTTT 58.947 33.333 0.00 0.00 38.18 1.94
2118 2163 8.131100 CCACAATGTAGTGCCTATAGATTTTTG 58.869 37.037 0.00 0.00 38.18 2.44
2119 2164 8.677300 CACAATGTAGTGCCTATAGATTTTTGT 58.323 33.333 0.00 0.00 32.04 2.83
2120 2165 8.677300 ACAATGTAGTGCCTATAGATTTTTGTG 58.323 33.333 0.00 0.00 0.00 3.33
2121 2166 8.892723 CAATGTAGTGCCTATAGATTTTTGTGA 58.107 33.333 0.00 0.00 0.00 3.58
2122 2167 9.461312 AATGTAGTGCCTATAGATTTTTGTGAA 57.539 29.630 0.00 0.00 0.00 3.18
2123 2168 8.856153 TGTAGTGCCTATAGATTTTTGTGAAA 57.144 30.769 0.00 0.00 0.00 2.69
2124 2169 8.946085 TGTAGTGCCTATAGATTTTTGTGAAAG 58.054 33.333 0.00 0.00 0.00 2.62
2125 2170 8.947115 GTAGTGCCTATAGATTTTTGTGAAAGT 58.053 33.333 0.00 0.00 0.00 2.66
2126 2171 8.045176 AGTGCCTATAGATTTTTGTGAAAGTC 57.955 34.615 0.00 0.00 33.17 3.01
2127 2172 7.665559 AGTGCCTATAGATTTTTGTGAAAGTCA 59.334 33.333 0.00 0.00 34.85 3.41
2128 2173 8.296713 GTGCCTATAGATTTTTGTGAAAGTCAA 58.703 33.333 0.00 0.00 34.85 3.18
2129 2174 8.855110 TGCCTATAGATTTTTGTGAAAGTCAAA 58.145 29.630 0.00 0.00 34.85 2.69
2130 2175 9.129209 GCCTATAGATTTTTGTGAAAGTCAAAC 57.871 33.333 0.00 0.00 34.85 2.93
2143 2188 5.861222 AAAGTCAAACTTTGCCAACTTTG 57.139 34.783 14.50 1.84 45.83 2.77
2144 2189 4.799564 AGTCAAACTTTGCCAACTTTGA 57.200 36.364 5.68 5.68 31.68 2.69
2145 2190 4.494484 AGTCAAACTTTGCCAACTTTGAC 58.506 39.130 21.64 21.64 46.84 3.18
2146 2191 3.616821 GTCAAACTTTGCCAACTTTGACC 59.383 43.478 19.93 9.30 43.35 4.02
2147 2192 3.259374 TCAAACTTTGCCAACTTTGACCA 59.741 39.130 5.68 0.00 29.66 4.02
2148 2193 3.971245 AACTTTGCCAACTTTGACCAA 57.029 38.095 0.00 0.00 0.00 3.67
2149 2194 3.525268 ACTTTGCCAACTTTGACCAAG 57.475 42.857 0.00 0.00 38.64 3.61
2151 2196 2.957491 TTGCCAACTTTGACCAAGTG 57.043 45.000 0.00 0.00 45.77 3.16
2152 2197 1.846007 TGCCAACTTTGACCAAGTGT 58.154 45.000 0.00 0.00 45.77 3.55
2153 2198 3.006112 TGCCAACTTTGACCAAGTGTA 57.994 42.857 0.00 0.00 45.77 2.90
2154 2199 3.561143 TGCCAACTTTGACCAAGTGTAT 58.439 40.909 0.00 0.00 45.77 2.29
2155 2200 4.720046 TGCCAACTTTGACCAAGTGTATA 58.280 39.130 0.00 0.00 45.77 1.47
2156 2201 4.759693 TGCCAACTTTGACCAAGTGTATAG 59.240 41.667 0.00 0.00 45.77 1.31
2157 2202 5.001232 GCCAACTTTGACCAAGTGTATAGA 58.999 41.667 0.00 0.00 45.77 1.98
2158 2203 5.122396 GCCAACTTTGACCAAGTGTATAGAG 59.878 44.000 0.00 0.00 45.77 2.43
2159 2204 6.464222 CCAACTTTGACCAAGTGTATAGAGA 58.536 40.000 0.00 0.00 45.77 3.10
2160 2205 6.934645 CCAACTTTGACCAAGTGTATAGAGAA 59.065 38.462 0.00 0.00 45.77 2.87
2161 2206 7.444183 CCAACTTTGACCAAGTGTATAGAGAAA 59.556 37.037 0.00 0.00 45.77 2.52
2162 2207 8.836413 CAACTTTGACCAAGTGTATAGAGAAAA 58.164 33.333 0.00 0.00 45.77 2.29
2163 2208 8.379457 ACTTTGACCAAGTGTATAGAGAAAAC 57.621 34.615 0.00 0.00 44.70 2.43
2164 2209 8.211629 ACTTTGACCAAGTGTATAGAGAAAACT 58.788 33.333 0.00 0.00 44.70 2.66
2165 2210 9.706691 CTTTGACCAAGTGTATAGAGAAAACTA 57.293 33.333 0.00 0.00 0.00 2.24
2167 2212 9.871238 TTGACCAAGTGTATAGAGAAAACTATC 57.129 33.333 0.00 0.00 35.19 2.08
2168 2213 9.256228 TGACCAAGTGTATAGAGAAAACTATCT 57.744 33.333 0.00 0.00 35.19 1.98
2213 2258 5.907197 ACATCCTCAAAATATAACTCGCG 57.093 39.130 0.00 0.00 0.00 5.87
2214 2259 5.597806 ACATCCTCAAAATATAACTCGCGA 58.402 37.500 9.26 9.26 0.00 5.87
2215 2260 6.223852 ACATCCTCAAAATATAACTCGCGAT 58.776 36.000 10.36 0.00 0.00 4.58
2216 2261 6.146184 ACATCCTCAAAATATAACTCGCGATG 59.854 38.462 10.36 6.65 0.00 3.84
2217 2262 5.597806 TCCTCAAAATATAACTCGCGATGT 58.402 37.500 10.36 7.38 0.00 3.06
2218 2263 6.741109 TCCTCAAAATATAACTCGCGATGTA 58.259 36.000 10.36 5.17 0.00 2.29
2219 2264 7.375834 TCCTCAAAATATAACTCGCGATGTAT 58.624 34.615 10.36 12.81 0.00 2.29
2220 2265 7.541091 TCCTCAAAATATAACTCGCGATGTATC 59.459 37.037 10.36 0.00 0.00 2.24
2221 2266 7.201444 CCTCAAAATATAACTCGCGATGTATCC 60.201 40.741 10.36 0.00 0.00 2.59
2222 2267 7.149307 TCAAAATATAACTCGCGATGTATCCA 58.851 34.615 10.36 0.00 0.00 3.41
2223 2268 7.328493 TCAAAATATAACTCGCGATGTATCCAG 59.672 37.037 10.36 0.00 0.00 3.86
2224 2269 5.899120 ATATAACTCGCGATGTATCCAGT 57.101 39.130 10.36 0.00 0.00 4.00
2225 2270 2.209838 AACTCGCGATGTATCCAGTG 57.790 50.000 10.36 0.00 0.00 3.66
2226 2271 1.389555 ACTCGCGATGTATCCAGTGA 58.610 50.000 10.36 0.00 0.00 3.41
2227 2272 1.957177 ACTCGCGATGTATCCAGTGAT 59.043 47.619 10.36 0.00 34.87 3.06
2228 2273 2.287849 ACTCGCGATGTATCCAGTGATG 60.288 50.000 10.36 0.00 32.18 3.07
2229 2274 1.681264 TCGCGATGTATCCAGTGATGT 59.319 47.619 3.71 0.00 32.18 3.06
2230 2275 2.054363 CGCGATGTATCCAGTGATGTC 58.946 52.381 0.00 0.00 32.18 3.06
2231 2276 2.408050 GCGATGTATCCAGTGATGTCC 58.592 52.381 0.00 0.00 32.18 4.02
2232 2277 2.224042 GCGATGTATCCAGTGATGTCCA 60.224 50.000 0.00 0.00 32.18 4.02
2233 2278 3.555795 GCGATGTATCCAGTGATGTCCAT 60.556 47.826 0.00 0.00 32.18 3.41
2234 2279 4.635223 CGATGTATCCAGTGATGTCCATT 58.365 43.478 0.00 0.00 32.18 3.16
2235 2280 5.059161 CGATGTATCCAGTGATGTCCATTT 58.941 41.667 0.00 0.00 32.18 2.32
2236 2281 5.049886 CGATGTATCCAGTGATGTCCATTTG 60.050 44.000 0.00 0.00 32.18 2.32
2237 2282 4.525996 TGTATCCAGTGATGTCCATTTGG 58.474 43.478 0.00 0.00 35.15 3.28
2238 2283 3.744940 ATCCAGTGATGTCCATTTGGT 57.255 42.857 0.00 0.00 35.28 3.67
2239 2284 4.860802 ATCCAGTGATGTCCATTTGGTA 57.139 40.909 0.00 0.00 35.28 3.25
2240 2285 4.860802 TCCAGTGATGTCCATTTGGTAT 57.139 40.909 0.00 0.00 35.28 2.73
2241 2286 5.191727 TCCAGTGATGTCCATTTGGTATT 57.808 39.130 0.00 0.00 35.28 1.89
2242 2287 5.192927 TCCAGTGATGTCCATTTGGTATTC 58.807 41.667 0.00 0.00 35.28 1.75
2243 2288 5.044919 TCCAGTGATGTCCATTTGGTATTCT 60.045 40.000 0.00 0.00 35.28 2.40
2244 2289 6.157820 TCCAGTGATGTCCATTTGGTATTCTA 59.842 38.462 0.00 0.00 35.28 2.10
2245 2290 6.484643 CCAGTGATGTCCATTTGGTATTCTAG 59.515 42.308 0.00 0.00 36.34 2.43
2246 2291 7.275183 CAGTGATGTCCATTTGGTATTCTAGA 58.725 38.462 0.00 0.00 36.34 2.43
2247 2292 7.935755 CAGTGATGTCCATTTGGTATTCTAGAT 59.064 37.037 0.00 0.00 36.34 1.98
2248 2293 7.935755 AGTGATGTCCATTTGGTATTCTAGATG 59.064 37.037 0.00 0.00 36.34 2.90
2249 2294 7.716998 GTGATGTCCATTTGGTATTCTAGATGT 59.283 37.037 0.00 0.00 36.34 3.06
2250 2295 8.933653 TGATGTCCATTTGGTATTCTAGATGTA 58.066 33.333 0.00 0.00 36.34 2.29
2251 2296 9.209175 GATGTCCATTTGGTATTCTAGATGTAC 57.791 37.037 0.00 0.27 36.34 2.90
2252 2297 7.506114 TGTCCATTTGGTATTCTAGATGTACC 58.494 38.462 20.29 20.29 38.65 3.34
2253 2298 7.347222 TGTCCATTTGGTATTCTAGATGTACCT 59.653 37.037 24.31 10.63 38.89 3.08
2254 2299 8.867097 GTCCATTTGGTATTCTAGATGTACCTA 58.133 37.037 24.31 18.45 38.89 3.08
2255 2300 8.867097 TCCATTTGGTATTCTAGATGTACCTAC 58.133 37.037 24.31 9.12 38.89 3.18
2256 2301 8.871125 CCATTTGGTATTCTAGATGTACCTACT 58.129 37.037 24.31 14.71 38.89 2.57
2261 2306 9.710818 TGGTATTCTAGATGTACCTACTTTTCT 57.289 33.333 24.31 0.00 38.89 2.52
2283 2328 9.921637 TTTCTTCAAAGTTTGTAATGTTTGACT 57.078 25.926 15.08 0.00 38.35 3.41
2284 2329 9.921637 TTCTTCAAAGTTTGTAATGTTTGACTT 57.078 25.926 15.08 0.00 38.35 3.01
2285 2330 9.921637 TCTTCAAAGTTTGTAATGTTTGACTTT 57.078 25.926 15.08 0.00 38.35 2.66
2288 2333 9.482627 TCAAAGTTTGTAATGTTTGACTTTTGT 57.517 25.926 15.08 0.00 35.75 2.83
2305 2350 9.515226 TGACTTTTGTAAAAATCTATAGGCACT 57.485 29.630 0.00 0.00 46.37 4.40
2319 2364 3.194005 AGGCACTACATTATGGAACGG 57.806 47.619 0.00 0.00 36.02 4.44
2320 2365 2.769663 AGGCACTACATTATGGAACGGA 59.230 45.455 0.00 0.00 36.02 4.69
2321 2366 3.131396 GGCACTACATTATGGAACGGAG 58.869 50.000 0.00 0.00 0.00 4.63
2322 2367 3.131396 GCACTACATTATGGAACGGAGG 58.869 50.000 0.00 0.00 0.00 4.30
2323 2368 3.728845 CACTACATTATGGAACGGAGGG 58.271 50.000 0.00 0.00 0.00 4.30
2324 2369 3.386726 CACTACATTATGGAACGGAGGGA 59.613 47.826 0.00 0.00 0.00 4.20
2325 2370 3.641906 ACTACATTATGGAACGGAGGGAG 59.358 47.826 0.00 0.00 0.00 4.30
2326 2371 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
2327 2372 3.649843 ACATTATGGAACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
2328 2373 4.232091 ACATTATGGAACGGAGGGAGTAT 58.768 43.478 0.00 0.00 0.00 2.12
2329 2374 4.658901 ACATTATGGAACGGAGGGAGTATT 59.341 41.667 0.00 0.00 0.00 1.89
2330 2375 4.682778 TTATGGAACGGAGGGAGTATTG 57.317 45.455 0.00 0.00 0.00 1.90
2331 2376 1.946984 TGGAACGGAGGGAGTATTGT 58.053 50.000 0.00 0.00 0.00 2.71
2332 2377 1.829222 TGGAACGGAGGGAGTATTGTC 59.171 52.381 0.00 0.00 0.00 3.18
2333 2378 1.138464 GGAACGGAGGGAGTATTGTCC 59.862 57.143 0.00 0.00 35.64 4.02
2335 2380 1.740285 CGGAGGGAGTATTGTCCGG 59.260 63.158 0.00 0.00 46.68 5.14
2336 2381 1.745320 CGGAGGGAGTATTGTCCGGG 61.745 65.000 0.00 0.00 46.68 5.73
2337 2382 0.398098 GGAGGGAGTATTGTCCGGGA 60.398 60.000 0.00 0.00 37.50 5.14
2338 2383 1.492764 GAGGGAGTATTGTCCGGGAA 58.507 55.000 0.00 0.00 37.50 3.97
2339 2384 1.835531 GAGGGAGTATTGTCCGGGAAA 59.164 52.381 0.00 0.00 37.50 3.13
2340 2385 1.558294 AGGGAGTATTGTCCGGGAAAC 59.442 52.381 0.00 0.00 37.50 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.659089 CTAGTGTCCCCAACCGGCG 62.659 68.421 0.00 0.00 0.00 6.46
1 2 2.267961 CTAGTGTCCCCAACCGGC 59.732 66.667 0.00 0.00 0.00 6.13
2 3 1.910580 ATGCTAGTGTCCCCAACCGG 61.911 60.000 0.00 0.00 0.00 5.28
3 4 0.744414 CATGCTAGTGTCCCCAACCG 60.744 60.000 0.00 0.00 0.00 4.44
4 5 0.328258 ACATGCTAGTGTCCCCAACC 59.672 55.000 0.00 0.00 0.00 3.77
5 6 1.453155 CACATGCTAGTGTCCCCAAC 58.547 55.000 0.00 0.00 34.83 3.77
6 7 0.327924 CCACATGCTAGTGTCCCCAA 59.672 55.000 8.03 0.00 37.82 4.12
7 8 1.561769 CCCACATGCTAGTGTCCCCA 61.562 60.000 8.03 0.00 37.82 4.96
8 9 1.224592 CCCACATGCTAGTGTCCCC 59.775 63.158 8.03 0.00 37.82 4.81
9 10 1.224592 CCCCACATGCTAGTGTCCC 59.775 63.158 8.03 0.00 37.82 4.46
10 11 0.328258 AACCCCACATGCTAGTGTCC 59.672 55.000 8.03 0.00 37.82 4.02
11 12 1.003118 TCAACCCCACATGCTAGTGTC 59.997 52.381 8.03 0.00 37.82 3.67
12 13 1.064003 TCAACCCCACATGCTAGTGT 58.936 50.000 8.03 0.00 37.82 3.55
13 14 2.425143 ATCAACCCCACATGCTAGTG 57.575 50.000 0.00 2.61 39.21 2.74
14 15 2.308570 TGAATCAACCCCACATGCTAGT 59.691 45.455 0.00 0.00 0.00 2.57
15 16 2.684881 GTGAATCAACCCCACATGCTAG 59.315 50.000 0.00 0.00 0.00 3.42
16 17 2.040947 TGTGAATCAACCCCACATGCTA 59.959 45.455 0.00 0.00 36.07 3.49
17 18 1.203038 TGTGAATCAACCCCACATGCT 60.203 47.619 0.00 0.00 36.07 3.79
18 19 1.203052 CTGTGAATCAACCCCACATGC 59.797 52.381 0.00 0.00 39.68 4.06
19 20 1.203052 GCTGTGAATCAACCCCACATG 59.797 52.381 0.00 0.00 39.68 3.21
20 21 1.549203 GCTGTGAATCAACCCCACAT 58.451 50.000 0.00 0.00 39.68 3.21
21 22 0.888736 CGCTGTGAATCAACCCCACA 60.889 55.000 0.00 0.00 38.34 4.17
22 23 0.605319 TCGCTGTGAATCAACCCCAC 60.605 55.000 0.00 0.00 0.00 4.61
23 24 0.321564 CTCGCTGTGAATCAACCCCA 60.322 55.000 0.00 0.00 0.00 4.96
24 25 1.648467 GCTCGCTGTGAATCAACCCC 61.648 60.000 0.00 0.00 0.00 4.95
25 26 1.648467 GGCTCGCTGTGAATCAACCC 61.648 60.000 0.00 0.00 0.00 4.11
26 27 1.648467 GGGCTCGCTGTGAATCAACC 61.648 60.000 0.00 0.00 0.00 3.77
27 28 0.955428 TGGGCTCGCTGTGAATCAAC 60.955 55.000 0.00 0.00 0.00 3.18
28 29 0.955428 GTGGGCTCGCTGTGAATCAA 60.955 55.000 0.00 0.00 0.00 2.57
29 30 1.375908 GTGGGCTCGCTGTGAATCA 60.376 57.895 0.00 0.00 0.00 2.57
30 31 2.109126 GGTGGGCTCGCTGTGAATC 61.109 63.158 0.00 0.00 0.00 2.52
31 32 2.045926 GGTGGGCTCGCTGTGAAT 60.046 61.111 0.00 0.00 0.00 2.57
32 33 3.241530 AGGTGGGCTCGCTGTGAA 61.242 61.111 0.00 0.00 0.00 3.18
33 34 4.007644 CAGGTGGGCTCGCTGTGA 62.008 66.667 0.00 0.00 0.00 3.58
34 35 4.320456 ACAGGTGGGCTCGCTGTG 62.320 66.667 0.00 0.00 0.00 3.66
35 36 4.008933 GACAGGTGGGCTCGCTGT 62.009 66.667 0.00 0.00 0.00 4.40
36 37 2.809861 ATTGACAGGTGGGCTCGCTG 62.810 60.000 0.00 0.00 0.00 5.18
37 38 2.527951 GATTGACAGGTGGGCTCGCT 62.528 60.000 0.00 0.00 0.00 4.93
38 39 2.045926 ATTGACAGGTGGGCTCGC 60.046 61.111 0.00 0.00 0.00 5.03
39 40 1.811266 CGATTGACAGGTGGGCTCG 60.811 63.158 0.00 0.00 0.00 5.03
40 41 2.109126 GCGATTGACAGGTGGGCTC 61.109 63.158 0.00 0.00 0.00 4.70
41 42 2.045926 GCGATTGACAGGTGGGCT 60.046 61.111 0.00 0.00 0.00 5.19
42 43 3.134127 GGCGATTGACAGGTGGGC 61.134 66.667 0.00 0.00 0.00 5.36
43 44 2.796483 TTCGGCGATTGACAGGTGGG 62.796 60.000 11.76 0.00 0.00 4.61
44 45 1.375396 TTCGGCGATTGACAGGTGG 60.375 57.895 11.76 0.00 0.00 4.61
45 46 1.787847 GTTCGGCGATTGACAGGTG 59.212 57.895 11.76 0.00 0.00 4.00
46 47 1.736645 CGTTCGGCGATTGACAGGT 60.737 57.895 11.76 0.00 44.77 4.00
47 48 2.452813 CCGTTCGGCGATTGACAGG 61.453 63.158 11.76 8.40 44.77 4.00
48 49 3.081133 CCGTTCGGCGATTGACAG 58.919 61.111 11.76 2.94 44.77 3.51
49 50 3.115892 GCCGTTCGGCGATTGACA 61.116 61.111 20.05 0.00 44.77 3.58
73 74 4.899239 GGATCCTCTGCCGTGCGG 62.899 72.222 3.84 6.22 36.06 5.69
78 79 4.933064 GACGCGGATCCTCTGCCG 62.933 72.222 12.47 7.08 45.71 5.69
79 80 4.593864 GGACGCGGATCCTCTGCC 62.594 72.222 12.47 2.02 45.71 4.85
80 81 1.528292 ATAGGACGCGGATCCTCTGC 61.528 60.000 20.41 5.03 46.92 4.26
81 82 1.822506 TATAGGACGCGGATCCTCTG 58.177 55.000 20.41 1.52 46.92 3.35
82 83 2.581216 TTATAGGACGCGGATCCTCT 57.419 50.000 20.41 13.96 46.92 3.69
83 84 3.576648 CTTTTATAGGACGCGGATCCTC 58.423 50.000 20.41 3.21 46.92 3.71
85 86 2.067013 GCTTTTATAGGACGCGGATCC 58.933 52.381 12.47 9.73 39.28 3.36
86 87 3.027974 AGCTTTTATAGGACGCGGATC 57.972 47.619 12.47 0.00 0.00 3.36
87 88 3.131396 CAAGCTTTTATAGGACGCGGAT 58.869 45.455 12.47 0.18 0.00 4.18
88 89 2.546778 CAAGCTTTTATAGGACGCGGA 58.453 47.619 12.47 0.00 0.00 5.54
89 90 1.003866 GCAAGCTTTTATAGGACGCGG 60.004 52.381 12.47 0.00 0.00 6.46
90 91 1.933853 AGCAAGCTTTTATAGGACGCG 59.066 47.619 3.53 3.53 0.00 6.01
91 92 2.033662 CGAGCAAGCTTTTATAGGACGC 60.034 50.000 0.00 0.00 0.00 5.19
92 93 3.000322 CACGAGCAAGCTTTTATAGGACG 60.000 47.826 0.00 0.00 0.00 4.79
93 94 3.933332 ACACGAGCAAGCTTTTATAGGAC 59.067 43.478 0.00 0.00 0.00 3.85
94 95 4.202245 ACACGAGCAAGCTTTTATAGGA 57.798 40.909 0.00 0.00 0.00 2.94
95 96 4.946784 AACACGAGCAAGCTTTTATAGG 57.053 40.909 0.00 0.00 0.00 2.57
96 97 5.088739 CCAAACACGAGCAAGCTTTTATAG 58.911 41.667 0.00 0.00 0.00 1.31
141 142 4.015084 CTGCAGTCCATTGAATTCCTCTT 58.985 43.478 5.25 0.00 0.00 2.85
168 169 2.291209 TGCCCTTTGCTCTTCAATGA 57.709 45.000 0.00 0.00 42.00 2.57
308 309 7.152645 TCCATCCAGCGAAAATAAGTATAGTC 58.847 38.462 0.00 0.00 0.00 2.59
442 444 1.828979 TATTTTCGTGGTTGCCCTCC 58.171 50.000 0.00 0.00 0.00 4.30
500 502 4.344390 GGAAAACAGGGGAGATCTATACGT 59.656 45.833 0.00 0.00 0.00 3.57
502 504 5.367060 ACAGGAAAACAGGGGAGATCTATAC 59.633 44.000 0.00 0.00 0.00 1.47
510 512 5.437191 AGTAATACAGGAAAACAGGGGAG 57.563 43.478 0.00 0.00 0.00 4.30
645 651 4.285775 CCTCTTCCTCTCTTCACTTCCTTT 59.714 45.833 0.00 0.00 0.00 3.11
743 749 5.656420 AGGTCCAGAGGTCTTTATATAGGG 58.344 45.833 0.00 0.00 0.00 3.53
868 879 5.059161 AGTACTGCTGCATAACATACATGG 58.941 41.667 1.31 0.00 0.00 3.66
889 906 7.987750 TCAGACGAGCAGAATATATAGAAGT 57.012 36.000 0.00 0.00 0.00 3.01
894 911 8.622948 TCTTCTTCAGACGAGCAGAATATATA 57.377 34.615 0.00 0.00 0.00 0.86
895 912 7.517614 TCTTCTTCAGACGAGCAGAATATAT 57.482 36.000 0.00 0.00 0.00 0.86
896 913 6.944234 TCTTCTTCAGACGAGCAGAATATA 57.056 37.500 0.00 0.00 0.00 0.86
897 914 5.843673 TCTTCTTCAGACGAGCAGAATAT 57.156 39.130 0.00 0.00 0.00 1.28
899 916 4.527509 TTCTTCTTCAGACGAGCAGAAT 57.472 40.909 0.00 0.00 0.00 2.40
938 955 9.990360 TGCATATTAGATAACGAAACAGGATTA 57.010 29.630 0.00 0.00 0.00 1.75
939 956 8.902540 TGCATATTAGATAACGAAACAGGATT 57.097 30.769 0.00 0.00 0.00 3.01
1033 1050 4.452733 CCTCGCCCCGTTCCTCAC 62.453 72.222 0.00 0.00 0.00 3.51
1128 1145 2.049063 GACGACACGCAGGAGCTT 60.049 61.111 0.00 0.00 39.10 3.74
1425 1445 0.979665 CTCACTCCTCCAGCCTCAAA 59.020 55.000 0.00 0.00 0.00 2.69
1541 1561 4.379082 CGCTAATTAAACTGACCAACCCAC 60.379 45.833 0.00 0.00 0.00 4.61
1565 1585 3.809832 CACCAATCGGAAACTAGCCATAG 59.190 47.826 0.00 0.00 35.59 2.23
1645 1665 1.865340 GCTGCATACCGTTAGTTAGGC 59.135 52.381 0.00 0.00 0.00 3.93
1752 1773 6.054860 TCCCTCAGAGAGAAAAACCTAATG 57.945 41.667 0.00 0.00 0.00 1.90
1756 1777 4.323104 CGAATCCCTCAGAGAGAAAAACCT 60.323 45.833 0.00 0.00 0.00 3.50
1757 1778 3.935828 CGAATCCCTCAGAGAGAAAAACC 59.064 47.826 0.00 0.00 0.00 3.27
1758 1779 3.935828 CCGAATCCCTCAGAGAGAAAAAC 59.064 47.826 0.00 0.00 0.00 2.43
1762 1783 2.660572 CTCCGAATCCCTCAGAGAGAA 58.339 52.381 0.00 0.00 31.03 2.87
1763 1784 1.133637 CCTCCGAATCCCTCAGAGAGA 60.134 57.143 0.00 0.00 31.03 3.10
1764 1785 1.327303 CCTCCGAATCCCTCAGAGAG 58.673 60.000 0.00 0.00 31.03 3.20
1765 1786 0.105964 CCCTCCGAATCCCTCAGAGA 60.106 60.000 0.00 0.00 31.03 3.10
1766 1787 0.105964 TCCCTCCGAATCCCTCAGAG 60.106 60.000 0.00 0.00 0.00 3.35
1767 1788 0.338467 TTCCCTCCGAATCCCTCAGA 59.662 55.000 0.00 0.00 0.00 3.27
1768 1789 1.204146 TTTCCCTCCGAATCCCTCAG 58.796 55.000 0.00 0.00 0.00 3.35
1769 1790 1.893315 ATTTCCCTCCGAATCCCTCA 58.107 50.000 0.00 0.00 0.00 3.86
1770 1791 3.244596 CCTAATTTCCCTCCGAATCCCTC 60.245 52.174 0.00 0.00 0.00 4.30
1771 1792 2.711547 CCTAATTTCCCTCCGAATCCCT 59.288 50.000 0.00 0.00 0.00 4.20
1772 1793 2.442126 ACCTAATTTCCCTCCGAATCCC 59.558 50.000 0.00 0.00 0.00 3.85
1773 1794 3.859061 ACCTAATTTCCCTCCGAATCC 57.141 47.619 0.00 0.00 0.00 3.01
1774 1795 3.883489 CCAACCTAATTTCCCTCCGAATC 59.117 47.826 0.00 0.00 0.00 2.52
1775 1796 3.898482 CCAACCTAATTTCCCTCCGAAT 58.102 45.455 0.00 0.00 0.00 3.34
1776 1797 2.619590 GCCAACCTAATTTCCCTCCGAA 60.620 50.000 0.00 0.00 0.00 4.30
1777 1798 1.064979 GCCAACCTAATTTCCCTCCGA 60.065 52.381 0.00 0.00 0.00 4.55
1778 1799 1.389555 GCCAACCTAATTTCCCTCCG 58.610 55.000 0.00 0.00 0.00 4.63
1779 1800 1.006639 TGGCCAACCTAATTTCCCTCC 59.993 52.381 0.61 0.00 36.63 4.30
1780 1801 2.100197 GTGGCCAACCTAATTTCCCTC 58.900 52.381 7.24 0.00 36.63 4.30
1781 1802 1.273041 GGTGGCCAACCTAATTTCCCT 60.273 52.381 10.67 0.00 46.55 4.20
1782 1803 1.191535 GGTGGCCAACCTAATTTCCC 58.808 55.000 10.67 0.00 46.55 3.97
1793 1814 2.909965 GGCGAAGTTGGTGGCCAA 60.910 61.111 7.24 0.00 44.91 4.52
1795 1816 3.365265 CAGGCGAAGTTGGTGGCC 61.365 66.667 0.00 0.00 45.91 5.36
1796 1817 4.043200 GCAGGCGAAGTTGGTGGC 62.043 66.667 0.00 0.00 0.00 5.01
1797 1818 3.365265 GGCAGGCGAAGTTGGTGG 61.365 66.667 0.00 0.00 0.00 4.61
1798 1819 1.455383 AAAGGCAGGCGAAGTTGGTG 61.455 55.000 0.00 0.00 0.00 4.17
1799 1820 1.152756 AAAGGCAGGCGAAGTTGGT 60.153 52.632 0.00 0.00 0.00 3.67
1800 1821 0.890996 AGAAAGGCAGGCGAAGTTGG 60.891 55.000 0.00 0.00 0.00 3.77
1801 1822 1.808411 TAGAAAGGCAGGCGAAGTTG 58.192 50.000 0.00 0.00 0.00 3.16
1802 1823 2.633488 GATAGAAAGGCAGGCGAAGTT 58.367 47.619 0.00 0.00 0.00 2.66
1803 1824 1.134371 GGATAGAAAGGCAGGCGAAGT 60.134 52.381 0.00 0.00 0.00 3.01
1804 1825 1.587547 GGATAGAAAGGCAGGCGAAG 58.412 55.000 0.00 0.00 0.00 3.79
1805 1826 0.179084 CGGATAGAAAGGCAGGCGAA 60.179 55.000 0.00 0.00 0.00 4.70
1806 1827 1.040893 TCGGATAGAAAGGCAGGCGA 61.041 55.000 0.00 0.00 0.00 5.54
1807 1828 0.598680 CTCGGATAGAAAGGCAGGCG 60.599 60.000 0.00 0.00 0.00 5.52
1808 1829 0.466124 ACTCGGATAGAAAGGCAGGC 59.534 55.000 0.00 0.00 0.00 4.85
1809 1830 2.432510 AGAACTCGGATAGAAAGGCAGG 59.567 50.000 0.00 0.00 0.00 4.85
1810 1831 3.810310 AGAACTCGGATAGAAAGGCAG 57.190 47.619 0.00 0.00 0.00 4.85
1811 1832 3.118738 GGAAGAACTCGGATAGAAAGGCA 60.119 47.826 0.00 0.00 0.00 4.75
1812 1833 3.459145 GGAAGAACTCGGATAGAAAGGC 58.541 50.000 0.00 0.00 0.00 4.35
1813 1834 3.707102 AGGGAAGAACTCGGATAGAAAGG 59.293 47.826 0.00 0.00 0.00 3.11
1814 1835 4.647399 AGAGGGAAGAACTCGGATAGAAAG 59.353 45.833 0.00 0.00 39.90 2.62
1815 1836 4.611367 AGAGGGAAGAACTCGGATAGAAA 58.389 43.478 0.00 0.00 39.90 2.52
1816 1837 4.252570 AGAGGGAAGAACTCGGATAGAA 57.747 45.455 0.00 0.00 39.90 2.10
1817 1838 3.954904 CAAGAGGGAAGAACTCGGATAGA 59.045 47.826 0.00 0.00 39.90 1.98
1818 1839 3.954904 TCAAGAGGGAAGAACTCGGATAG 59.045 47.826 0.00 0.00 39.90 2.08
1819 1840 3.977312 TCAAGAGGGAAGAACTCGGATA 58.023 45.455 0.00 0.00 39.90 2.59
1820 1841 2.821437 TCAAGAGGGAAGAACTCGGAT 58.179 47.619 0.00 0.00 39.90 4.18
1821 1842 2.304221 TCAAGAGGGAAGAACTCGGA 57.696 50.000 0.00 0.00 39.90 4.55
1822 1843 2.898705 CATCAAGAGGGAAGAACTCGG 58.101 52.381 0.00 0.00 39.90 4.63
1823 1844 2.093764 AGCATCAAGAGGGAAGAACTCG 60.094 50.000 0.00 0.00 39.90 4.18
1824 1845 3.625649 AGCATCAAGAGGGAAGAACTC 57.374 47.619 0.00 0.00 35.20 3.01
1825 1846 4.379302 AAAGCATCAAGAGGGAAGAACT 57.621 40.909 0.00 0.00 0.00 3.01
1826 1847 4.520492 TCAAAAGCATCAAGAGGGAAGAAC 59.480 41.667 0.00 0.00 0.00 3.01
1827 1848 4.728772 TCAAAAGCATCAAGAGGGAAGAA 58.271 39.130 0.00 0.00 0.00 2.52
1828 1849 4.371624 TCAAAAGCATCAAGAGGGAAGA 57.628 40.909 0.00 0.00 0.00 2.87
1829 1850 4.614535 CGTTCAAAAGCATCAAGAGGGAAG 60.615 45.833 0.00 0.00 0.00 3.46
1830 1851 3.253188 CGTTCAAAAGCATCAAGAGGGAA 59.747 43.478 0.00 0.00 0.00 3.97
1831 1852 2.813754 CGTTCAAAAGCATCAAGAGGGA 59.186 45.455 0.00 0.00 0.00 4.20
1832 1853 2.813754 TCGTTCAAAAGCATCAAGAGGG 59.186 45.455 0.00 0.00 0.00 4.30
1833 1854 3.499918 AGTCGTTCAAAAGCATCAAGAGG 59.500 43.478 0.00 0.00 0.00 3.69
1834 1855 4.377841 GGAGTCGTTCAAAAGCATCAAGAG 60.378 45.833 0.00 0.00 0.00 2.85
1835 1856 3.498397 GGAGTCGTTCAAAAGCATCAAGA 59.502 43.478 0.00 0.00 0.00 3.02
1836 1857 3.499918 AGGAGTCGTTCAAAAGCATCAAG 59.500 43.478 0.00 0.00 0.00 3.02
1837 1858 3.476552 AGGAGTCGTTCAAAAGCATCAA 58.523 40.909 0.00 0.00 0.00 2.57
1838 1859 3.126001 AGGAGTCGTTCAAAAGCATCA 57.874 42.857 0.00 0.00 0.00 3.07
1839 1860 5.607119 TTTAGGAGTCGTTCAAAAGCATC 57.393 39.130 0.00 0.00 0.00 3.91
1840 1861 6.575162 AATTTAGGAGTCGTTCAAAAGCAT 57.425 33.333 0.00 0.00 0.00 3.79
1841 1862 6.038825 TGAAATTTAGGAGTCGTTCAAAAGCA 59.961 34.615 0.00 0.00 0.00 3.91
1842 1863 6.359883 GTGAAATTTAGGAGTCGTTCAAAAGC 59.640 38.462 0.00 0.00 0.00 3.51
1843 1864 7.414436 TGTGAAATTTAGGAGTCGTTCAAAAG 58.586 34.615 0.00 0.00 0.00 2.27
1844 1865 7.323049 TGTGAAATTTAGGAGTCGTTCAAAA 57.677 32.000 0.00 0.00 0.00 2.44
1845 1866 6.928979 TGTGAAATTTAGGAGTCGTTCAAA 57.071 33.333 0.00 0.00 0.00 2.69
1846 1867 6.928979 TTGTGAAATTTAGGAGTCGTTCAA 57.071 33.333 0.00 0.00 0.00 2.69
1847 1868 6.928979 TTTGTGAAATTTAGGAGTCGTTCA 57.071 33.333 0.00 0.00 0.00 3.18
1848 1869 7.537649 GGATTTTGTGAAATTTAGGAGTCGTTC 59.462 37.037 0.00 0.00 35.65 3.95
1849 1870 7.230712 AGGATTTTGTGAAATTTAGGAGTCGTT 59.769 33.333 0.00 0.00 35.65 3.85
1850 1871 6.715264 AGGATTTTGTGAAATTTAGGAGTCGT 59.285 34.615 0.00 0.00 35.65 4.34
1851 1872 7.145932 AGGATTTTGTGAAATTTAGGAGTCG 57.854 36.000 0.00 0.00 35.65 4.18
1887 1908 6.531923 TGAGGCATTTTGATTTGGATTTCAA 58.468 32.000 0.00 0.00 0.00 2.69
1888 1909 6.111669 TGAGGCATTTTGATTTGGATTTCA 57.888 33.333 0.00 0.00 0.00 2.69
1889 1910 6.652062 AGTTGAGGCATTTTGATTTGGATTTC 59.348 34.615 0.00 0.00 0.00 2.17
1890 1911 6.536447 AGTTGAGGCATTTTGATTTGGATTT 58.464 32.000 0.00 0.00 0.00 2.17
1891 1912 6.117975 AGTTGAGGCATTTTGATTTGGATT 57.882 33.333 0.00 0.00 0.00 3.01
1892 1913 5.750352 AGTTGAGGCATTTTGATTTGGAT 57.250 34.783 0.00 0.00 0.00 3.41
1893 1914 5.070180 TCAAGTTGAGGCATTTTGATTTGGA 59.930 36.000 0.08 0.00 0.00 3.53
1894 1915 5.299148 TCAAGTTGAGGCATTTTGATTTGG 58.701 37.500 0.08 0.00 0.00 3.28
1895 1916 8.537049 TTATCAAGTTGAGGCATTTTGATTTG 57.463 30.769 11.91 0.00 38.83 2.32
1896 1917 9.729281 ATTTATCAAGTTGAGGCATTTTGATTT 57.271 25.926 11.91 0.00 38.83 2.17
1897 1918 9.729281 AATTTATCAAGTTGAGGCATTTTGATT 57.271 25.926 11.91 0.00 38.83 2.57
1923 1944 9.793259 ACCAGAAGAATTGTGAGAAATAAGTTA 57.207 29.630 0.00 0.00 42.84 2.24
1924 1945 8.697507 ACCAGAAGAATTGTGAGAAATAAGTT 57.302 30.769 0.00 0.00 42.84 2.66
1925 1946 8.697507 AACCAGAAGAATTGTGAGAAATAAGT 57.302 30.769 0.00 0.00 42.84 2.24
1927 1948 9.231297 CCTAACCAGAAGAATTGTGAGAAATAA 57.769 33.333 0.00 0.00 42.84 1.40
1928 1949 8.383175 ACCTAACCAGAAGAATTGTGAGAAATA 58.617 33.333 0.00 0.00 42.84 1.40
1929 1950 7.234355 ACCTAACCAGAAGAATTGTGAGAAAT 58.766 34.615 0.00 0.00 42.84 2.17
1930 1951 6.601332 ACCTAACCAGAAGAATTGTGAGAAA 58.399 36.000 0.00 0.00 42.84 2.52
1931 1952 6.187727 ACCTAACCAGAAGAATTGTGAGAA 57.812 37.500 0.00 0.00 42.84 2.87
1932 1953 5.825593 ACCTAACCAGAAGAATTGTGAGA 57.174 39.130 0.00 0.00 42.84 3.27
1933 1954 6.884280 AAACCTAACCAGAAGAATTGTGAG 57.116 37.500 0.00 0.00 42.84 3.51
1934 1955 7.559897 AGAAAAACCTAACCAGAAGAATTGTGA 59.440 33.333 0.00 0.00 42.84 3.58
1935 1956 7.716612 AGAAAAACCTAACCAGAAGAATTGTG 58.283 34.615 0.00 0.00 39.39 3.33
1936 1957 7.780271 AGAGAAAAACCTAACCAGAAGAATTGT 59.220 33.333 0.00 0.00 0.00 2.71
1937 1958 8.171164 AGAGAAAAACCTAACCAGAAGAATTG 57.829 34.615 0.00 0.00 0.00 2.32
1939 1960 9.454859 CATAGAGAAAAACCTAACCAGAAGAAT 57.545 33.333 0.00 0.00 0.00 2.40
1940 1961 8.656806 TCATAGAGAAAAACCTAACCAGAAGAA 58.343 33.333 0.00 0.00 0.00 2.52
1941 1962 8.202461 TCATAGAGAAAAACCTAACCAGAAGA 57.798 34.615 0.00 0.00 0.00 2.87
1942 1963 7.550906 CCTCATAGAGAAAAACCTAACCAGAAG 59.449 40.741 0.00 0.00 0.00 2.85
1943 1964 7.394816 CCTCATAGAGAAAAACCTAACCAGAA 58.605 38.462 0.00 0.00 0.00 3.02
1944 1965 6.070194 CCCTCATAGAGAAAAACCTAACCAGA 60.070 42.308 0.00 0.00 0.00 3.86
1945 1966 6.070194 TCCCTCATAGAGAAAAACCTAACCAG 60.070 42.308 0.00 0.00 0.00 4.00
1946 1967 5.788533 TCCCTCATAGAGAAAAACCTAACCA 59.211 40.000 0.00 0.00 0.00 3.67
1947 1968 6.309389 TCCCTCATAGAGAAAAACCTAACC 57.691 41.667 0.00 0.00 0.00 2.85
1948 1969 8.047310 TGAATCCCTCATAGAGAAAAACCTAAC 58.953 37.037 0.00 0.00 0.00 2.34
1949 1970 8.158025 TGAATCCCTCATAGAGAAAAACCTAA 57.842 34.615 0.00 0.00 0.00 2.69
1950 1971 7.749377 TGAATCCCTCATAGAGAAAAACCTA 57.251 36.000 0.00 0.00 0.00 3.08
1951 1972 6.642733 TGAATCCCTCATAGAGAAAAACCT 57.357 37.500 0.00 0.00 0.00 3.50
1952 1973 6.319911 CCTTGAATCCCTCATAGAGAAAAACC 59.680 42.308 0.00 0.00 32.78 3.27
1953 1974 6.319911 CCCTTGAATCCCTCATAGAGAAAAAC 59.680 42.308 0.00 0.00 32.78 2.43
1954 1975 6.426587 CCCTTGAATCCCTCATAGAGAAAAA 58.573 40.000 0.00 0.00 32.78 1.94
1955 1976 5.632427 GCCCTTGAATCCCTCATAGAGAAAA 60.632 44.000 0.00 0.00 32.78 2.29
1956 1977 4.141390 GCCCTTGAATCCCTCATAGAGAAA 60.141 45.833 0.00 0.00 32.78 2.52
1957 1978 3.392616 GCCCTTGAATCCCTCATAGAGAA 59.607 47.826 0.00 0.00 32.78 2.87
1958 1979 2.975489 GCCCTTGAATCCCTCATAGAGA 59.025 50.000 0.00 0.00 32.78 3.10
1959 1980 2.978278 AGCCCTTGAATCCCTCATAGAG 59.022 50.000 0.00 0.00 32.78 2.43
1960 1981 3.066208 AGCCCTTGAATCCCTCATAGA 57.934 47.619 0.00 0.00 32.78 1.98
1961 1982 3.872459 AAGCCCTTGAATCCCTCATAG 57.128 47.619 0.00 0.00 32.78 2.23
1962 1983 5.930209 ATTAAGCCCTTGAATCCCTCATA 57.070 39.130 0.00 0.00 32.78 2.15
1963 1984 4.821532 ATTAAGCCCTTGAATCCCTCAT 57.178 40.909 0.00 0.00 32.78 2.90
1964 1985 4.608170 AATTAAGCCCTTGAATCCCTCA 57.392 40.909 0.00 0.00 0.00 3.86
1965 1986 5.073428 CCTAATTAAGCCCTTGAATCCCTC 58.927 45.833 0.00 0.00 0.00 4.30
2021 2066 3.565764 TGGCAGCTAGTAATTGATGCT 57.434 42.857 13.87 0.00 43.96 3.79
2065 2110 5.668991 TGGAGGGAGTATCACAGTAGTACTA 59.331 44.000 1.57 0.00 45.06 1.82
2066 2111 4.477581 TGGAGGGAGTATCACAGTAGTACT 59.522 45.833 0.00 0.00 45.06 2.73
2067 2112 4.789807 TGGAGGGAGTATCACAGTAGTAC 58.210 47.826 0.00 0.00 45.06 2.73
2068 2113 5.664815 ATGGAGGGAGTATCACAGTAGTA 57.335 43.478 0.00 0.00 45.06 1.82
2069 2114 4.544564 ATGGAGGGAGTATCACAGTAGT 57.455 45.455 0.00 0.00 45.06 2.73
2070 2115 4.282195 GGAATGGAGGGAGTATCACAGTAG 59.718 50.000 0.00 0.00 45.06 2.57
2071 2116 4.223953 GGAATGGAGGGAGTATCACAGTA 58.776 47.826 0.00 0.00 45.06 2.74
2072 2117 3.041946 GGAATGGAGGGAGTATCACAGT 58.958 50.000 0.00 0.00 45.06 3.55
2073 2118 3.041211 TGGAATGGAGGGAGTATCACAG 58.959 50.000 0.00 0.00 45.06 3.66
2074 2119 2.771943 GTGGAATGGAGGGAGTATCACA 59.228 50.000 0.00 0.00 45.06 3.58
2075 2120 2.771943 TGTGGAATGGAGGGAGTATCAC 59.228 50.000 0.00 0.00 40.51 3.06
2076 2121 3.129262 TGTGGAATGGAGGGAGTATCA 57.871 47.619 0.00 0.00 36.25 2.15
2077 2122 4.141390 ACATTGTGGAATGGAGGGAGTATC 60.141 45.833 0.00 0.00 43.00 2.24
2078 2123 3.788142 ACATTGTGGAATGGAGGGAGTAT 59.212 43.478 0.00 0.00 43.00 2.12
2079 2124 3.189606 ACATTGTGGAATGGAGGGAGTA 58.810 45.455 0.00 0.00 43.00 2.59
2080 2125 1.995542 ACATTGTGGAATGGAGGGAGT 59.004 47.619 0.00 0.00 43.00 3.85
2081 2126 2.814805 ACATTGTGGAATGGAGGGAG 57.185 50.000 0.00 0.00 43.00 4.30
2082 2127 3.931907 CTACATTGTGGAATGGAGGGA 57.068 47.619 0.00 0.00 44.23 4.20
2086 2131 2.308570 AGGCACTACATTGTGGAATGGA 59.691 45.455 7.20 0.00 43.00 3.41
2087 2132 2.726821 AGGCACTACATTGTGGAATGG 58.273 47.619 7.20 0.00 43.00 3.16
2101 2146 7.665559 TGACTTTCACAAAAATCTATAGGCACT 59.334 33.333 0.00 0.00 46.37 4.40
2102 2147 7.816640 TGACTTTCACAAAAATCTATAGGCAC 58.183 34.615 0.00 0.00 0.00 5.01
2103 2148 7.994425 TGACTTTCACAAAAATCTATAGGCA 57.006 32.000 0.00 0.00 0.00 4.75
2104 2149 9.129209 GTTTGACTTTCACAAAAATCTATAGGC 57.871 33.333 0.00 0.00 38.63 3.93
2109 2154 8.868916 GCAAAGTTTGACTTTCACAAAAATCTA 58.131 29.630 19.82 0.00 44.47 1.98
2110 2155 7.148423 GGCAAAGTTTGACTTTCACAAAAATCT 60.148 33.333 19.82 0.00 44.47 2.40
2111 2156 6.960992 GGCAAAGTTTGACTTTCACAAAAATC 59.039 34.615 19.82 0.00 44.47 2.17
2112 2157 6.429385 TGGCAAAGTTTGACTTTCACAAAAAT 59.571 30.769 21.83 0.00 44.47 1.82
2113 2158 5.760253 TGGCAAAGTTTGACTTTCACAAAAA 59.240 32.000 21.83 0.00 44.47 1.94
2114 2159 5.300752 TGGCAAAGTTTGACTTTCACAAAA 58.699 33.333 21.83 0.00 44.47 2.44
2115 2160 4.887748 TGGCAAAGTTTGACTTTCACAAA 58.112 34.783 21.83 0.00 44.47 2.83
2116 2161 4.527509 TGGCAAAGTTTGACTTTCACAA 57.472 36.364 21.83 0.00 44.47 3.33
2117 2162 4.021544 AGTTGGCAAAGTTTGACTTTCACA 60.022 37.500 21.83 0.00 44.47 3.58
2118 2163 4.494484 AGTTGGCAAAGTTTGACTTTCAC 58.506 39.130 21.83 12.78 44.47 3.18
2119 2164 4.799564 AGTTGGCAAAGTTTGACTTTCA 57.200 36.364 21.83 0.00 44.47 2.69
2127 2172 3.971245 TGGTCAAAGTTGGCAAAGTTT 57.029 38.095 0.00 0.42 39.10 2.66
2128 2173 3.860641 CTTGGTCAAAGTTGGCAAAGTT 58.139 40.909 0.00 0.00 38.66 2.66
2129 2174 3.525268 CTTGGTCAAAGTTGGCAAAGT 57.475 42.857 0.00 0.00 38.66 2.66
2139 2184 8.608844 AGTTTTCTCTATACACTTGGTCAAAG 57.391 34.615 0.00 0.00 42.07 2.77
2141 2186 9.871238 GATAGTTTTCTCTATACACTTGGTCAA 57.129 33.333 0.00 0.00 31.71 3.18
2142 2187 9.256228 AGATAGTTTTCTCTATACACTTGGTCA 57.744 33.333 0.00 0.00 31.71 4.02
2187 2232 9.302345 CGCGAGTTATATTTTGAGGATGTATAT 57.698 33.333 0.00 0.00 0.00 0.86
2188 2233 8.517056 TCGCGAGTTATATTTTGAGGATGTATA 58.483 33.333 3.71 0.00 0.00 1.47
2189 2234 7.375834 TCGCGAGTTATATTTTGAGGATGTAT 58.624 34.615 3.71 0.00 0.00 2.29
2190 2235 6.741109 TCGCGAGTTATATTTTGAGGATGTA 58.259 36.000 3.71 0.00 0.00 2.29
2191 2236 5.597806 TCGCGAGTTATATTTTGAGGATGT 58.402 37.500 3.71 0.00 0.00 3.06
2192 2237 6.146184 ACATCGCGAGTTATATTTTGAGGATG 59.854 38.462 16.66 3.78 34.23 3.51
2193 2238 6.223852 ACATCGCGAGTTATATTTTGAGGAT 58.776 36.000 16.66 0.00 0.00 3.24
2194 2239 5.597806 ACATCGCGAGTTATATTTTGAGGA 58.402 37.500 16.66 0.00 0.00 3.71
2195 2240 5.907197 ACATCGCGAGTTATATTTTGAGG 57.093 39.130 16.66 0.00 0.00 3.86
2196 2241 7.328493 TGGATACATCGCGAGTTATATTTTGAG 59.672 37.037 16.66 0.00 46.17 3.02
2197 2242 7.149307 TGGATACATCGCGAGTTATATTTTGA 58.851 34.615 16.66 0.00 46.17 2.69
2198 2243 7.346208 TGGATACATCGCGAGTTATATTTTG 57.654 36.000 16.66 7.01 46.17 2.44
2212 2257 7.944117 CCAAATGGACATCACTGGATACATCG 61.944 46.154 0.00 0.00 42.29 3.84
2213 2258 5.240183 CCAAATGGACATCACTGGATACATC 59.760 44.000 0.00 0.00 42.29 3.06
2214 2259 5.135383 CCAAATGGACATCACTGGATACAT 58.865 41.667 0.00 0.00 42.29 2.29
2215 2260 4.018506 ACCAAATGGACATCACTGGATACA 60.019 41.667 6.42 0.00 41.66 2.29
2216 2261 4.526970 ACCAAATGGACATCACTGGATAC 58.473 43.478 6.42 0.00 36.00 2.24
2217 2262 4.860802 ACCAAATGGACATCACTGGATA 57.139 40.909 6.42 0.00 36.00 2.59
2218 2263 3.744940 ACCAAATGGACATCACTGGAT 57.255 42.857 6.42 0.00 36.00 3.41
2219 2264 4.860802 ATACCAAATGGACATCACTGGA 57.139 40.909 6.42 0.00 36.00 3.86
2220 2265 5.195940 AGAATACCAAATGGACATCACTGG 58.804 41.667 6.42 6.52 37.59 4.00
2221 2266 7.275183 TCTAGAATACCAAATGGACATCACTG 58.725 38.462 6.42 0.00 38.94 3.66
2222 2267 7.437713 TCTAGAATACCAAATGGACATCACT 57.562 36.000 6.42 5.46 38.94 3.41
2223 2268 7.716998 ACATCTAGAATACCAAATGGACATCAC 59.283 37.037 6.42 0.00 38.94 3.06
2224 2269 7.805163 ACATCTAGAATACCAAATGGACATCA 58.195 34.615 6.42 0.00 38.94 3.07
2225 2270 9.209175 GTACATCTAGAATACCAAATGGACATC 57.791 37.037 6.42 1.21 38.94 3.06
2226 2271 8.157476 GGTACATCTAGAATACCAAATGGACAT 58.843 37.037 22.87 0.00 38.61 3.06
2227 2272 7.347222 AGGTACATCTAGAATACCAAATGGACA 59.653 37.037 26.72 0.00 40.81 4.02
2228 2273 7.736893 AGGTACATCTAGAATACCAAATGGAC 58.263 38.462 26.72 13.44 40.81 4.02
2229 2274 7.931015 AGGTACATCTAGAATACCAAATGGA 57.069 36.000 26.72 3.52 40.81 3.41
2230 2275 8.871125 AGTAGGTACATCTAGAATACCAAATGG 58.129 37.037 26.72 0.00 40.81 3.16
2235 2280 9.710818 AGAAAAGTAGGTACATCTAGAATACCA 57.289 33.333 26.72 15.98 40.81 3.25
2257 2302 9.921637 AGTCAAACATTACAAACTTTGAAGAAA 57.078 25.926 8.55 0.00 35.08 2.52
2258 2303 9.921637 AAGTCAAACATTACAAACTTTGAAGAA 57.078 25.926 8.55 0.62 35.08 2.52
2259 2304 9.921637 AAAGTCAAACATTACAAACTTTGAAGA 57.078 25.926 8.55 0.00 36.06 2.87
2262 2307 9.482627 ACAAAAGTCAAACATTACAAACTTTGA 57.517 25.926 8.55 0.00 37.12 2.69
2279 2324 9.515226 AGTGCCTATAGATTTTTACAAAAGTCA 57.485 29.630 0.00 0.87 37.17 3.41
2291 2336 9.726438 GTTCCATAATGTAGTGCCTATAGATTT 57.274 33.333 0.00 0.00 0.00 2.17
2292 2337 8.035394 CGTTCCATAATGTAGTGCCTATAGATT 58.965 37.037 0.00 0.00 0.00 2.40
2293 2338 7.363880 CCGTTCCATAATGTAGTGCCTATAGAT 60.364 40.741 0.00 0.00 0.00 1.98
2294 2339 6.071560 CCGTTCCATAATGTAGTGCCTATAGA 60.072 42.308 0.00 0.00 0.00 1.98
2295 2340 6.071560 TCCGTTCCATAATGTAGTGCCTATAG 60.072 42.308 0.00 0.00 0.00 1.31
2296 2341 5.776208 TCCGTTCCATAATGTAGTGCCTATA 59.224 40.000 0.00 0.00 0.00 1.31
2297 2342 4.591498 TCCGTTCCATAATGTAGTGCCTAT 59.409 41.667 0.00 0.00 0.00 2.57
2298 2343 3.962063 TCCGTTCCATAATGTAGTGCCTA 59.038 43.478 0.00 0.00 0.00 3.93
2299 2344 2.769663 TCCGTTCCATAATGTAGTGCCT 59.230 45.455 0.00 0.00 0.00 4.75
2300 2345 3.131396 CTCCGTTCCATAATGTAGTGCC 58.869 50.000 0.00 0.00 0.00 5.01
2301 2346 3.131396 CCTCCGTTCCATAATGTAGTGC 58.869 50.000 0.00 0.00 0.00 4.40
2302 2347 3.386726 TCCCTCCGTTCCATAATGTAGTG 59.613 47.826 0.00 0.00 0.00 2.74
2303 2348 3.641906 CTCCCTCCGTTCCATAATGTAGT 59.358 47.826 0.00 0.00 0.00 2.73
2304 2349 3.641906 ACTCCCTCCGTTCCATAATGTAG 59.358 47.826 0.00 0.00 0.00 2.74
2305 2350 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
2306 2351 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
2307 2352 4.891992 ATACTCCCTCCGTTCCATAATG 57.108 45.455 0.00 0.00 0.00 1.90
2308 2353 4.658901 ACAATACTCCCTCCGTTCCATAAT 59.341 41.667 0.00 0.00 0.00 1.28
2309 2354 4.035112 ACAATACTCCCTCCGTTCCATAA 58.965 43.478 0.00 0.00 0.00 1.90
2310 2355 3.640029 GACAATACTCCCTCCGTTCCATA 59.360 47.826 0.00 0.00 0.00 2.74
2311 2356 2.434702 GACAATACTCCCTCCGTTCCAT 59.565 50.000 0.00 0.00 0.00 3.41
2312 2357 1.829222 GACAATACTCCCTCCGTTCCA 59.171 52.381 0.00 0.00 0.00 3.53
2313 2358 1.138464 GGACAATACTCCCTCCGTTCC 59.862 57.143 0.00 0.00 0.00 3.62
2314 2359 1.202382 CGGACAATACTCCCTCCGTTC 60.202 57.143 0.00 0.00 40.71 3.95
2315 2360 0.822164 CGGACAATACTCCCTCCGTT 59.178 55.000 0.00 0.00 40.71 4.44
2316 2361 1.041447 CCGGACAATACTCCCTCCGT 61.041 60.000 0.00 0.00 43.50 4.69
2317 2362 1.740285 CCGGACAATACTCCCTCCG 59.260 63.158 0.00 0.00 44.42 4.63
2318 2363 0.398098 TCCCGGACAATACTCCCTCC 60.398 60.000 0.73 0.00 0.00 4.30
2319 2364 1.492764 TTCCCGGACAATACTCCCTC 58.507 55.000 0.73 0.00 0.00 4.30
2320 2365 1.558294 GTTTCCCGGACAATACTCCCT 59.442 52.381 0.73 0.00 0.00 4.20
2321 2366 1.407851 GGTTTCCCGGACAATACTCCC 60.408 57.143 0.73 0.00 0.00 4.30
2322 2367 1.407851 GGGTTTCCCGGACAATACTCC 60.408 57.143 0.73 0.00 32.13 3.85
2323 2368 2.034104 GGGTTTCCCGGACAATACTC 57.966 55.000 0.73 0.00 32.13 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.