Multiple sequence alignment - TraesCS5B01G121500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G121500 chr5B 100.000 8029 0 0 1 8029 216660488 216652460 0.000000e+00 14827.0
1 TraesCS5B01G121500 chr5B 95.446 1098 48 2 2274 3370 291077058 291075962 0.000000e+00 1749.0
2 TraesCS5B01G121500 chr5B 93.083 665 35 4 3368 4022 707448010 707448673 0.000000e+00 963.0
3 TraesCS5B01G121500 chr5B 92.073 656 49 3 3368 4022 138347664 138348317 0.000000e+00 920.0
4 TraesCS5B01G121500 chr5B 93.052 403 23 5 5487 5886 377191794 377191394 1.160000e-162 584.0
5 TraesCS5B01G121500 chr5B 85.606 528 47 10 253 769 545087673 545087164 1.980000e-145 527.0
6 TraesCS5B01G121500 chr5D 97.105 2176 48 6 5867 8029 193634854 193632681 0.000000e+00 3655.0
7 TraesCS5B01G121500 chr5D 96.196 1472 40 6 4020 5476 193636322 193634852 0.000000e+00 2394.0
8 TraesCS5B01G121500 chr5D 95.826 599 20 2 1676 2274 193636908 193636315 0.000000e+00 963.0
9 TraesCS5B01G121500 chr5D 93.607 610 19 3 990 1595 193637614 193637021 0.000000e+00 893.0
10 TraesCS5B01G121500 chr5D 95.618 251 8 1 1 251 193642657 193642410 4.510000e-107 399.0
11 TraesCS5B01G121500 chr5D 86.567 134 6 2 848 981 193642418 193642297 3.910000e-28 137.0
12 TraesCS5B01G121500 chr5D 85.882 85 7 3 531 614 124542436 124542356 1.440000e-12 86.1
13 TraesCS5B01G121500 chr5A 98.244 1424 24 1 5867 7289 253601078 253602501 0.000000e+00 2490.0
14 TraesCS5B01G121500 chr5A 96.514 1463 43 4 4020 5476 253599620 253601080 0.000000e+00 2412.0
15 TraesCS5B01G121500 chr5A 94.774 842 21 5 1445 2274 253598797 253599627 0.000000e+00 1290.0
16 TraesCS5B01G121500 chr5A 95.594 749 21 5 7291 8029 253605108 253605854 0.000000e+00 1190.0
17 TraesCS5B01G121500 chr5A 94.534 494 16 5 956 1449 253592966 253593448 0.000000e+00 752.0
18 TraesCS5B01G121500 chr5A 95.263 380 17 1 5487 5866 32129722 32130100 1.150000e-167 601.0
19 TraesCS5B01G121500 chr5A 94.024 251 11 3 1 251 253591481 253591727 2.120000e-100 377.0
20 TraesCS5B01G121500 chr5A 87.671 73 9 0 500 572 456492693 456492765 1.440000e-12 86.1
21 TraesCS5B01G121500 chr1B 95.116 1249 52 5 2749 3994 117185465 117184223 0.000000e+00 1960.0
22 TraesCS5B01G121500 chr1B 94.022 1171 58 9 2275 3434 141119883 141118714 0.000000e+00 1764.0
23 TraesCS5B01G121500 chr1B 93.902 656 32 8 3368 4022 530962444 530963092 0.000000e+00 983.0
24 TraesCS5B01G121500 chr1B 84.167 600 61 19 242 827 296493434 296492855 1.180000e-152 551.0
25 TraesCS5B01G121500 chr2A 94.796 1249 62 2 2749 3994 727178137 727179385 0.000000e+00 1943.0
26 TraesCS5B01G121500 chr2A 92.097 658 49 3 3368 4024 762153464 762154119 0.000000e+00 924.0
27 TraesCS5B01G121500 chr2A 85.434 357 41 7 266 614 92478157 92478510 2.130000e-95 361.0
28 TraesCS5B01G121500 chr7B 94.075 1249 58 3 2749 3994 323204385 323203150 0.000000e+00 1882.0
29 TraesCS5B01G121500 chr7B 91.257 1018 53 14 2980 3994 16918394 16919378 0.000000e+00 1354.0
30 TraesCS5B01G121500 chr7B 91.212 660 48 5 3368 4017 45060609 45061268 0.000000e+00 889.0
31 TraesCS5B01G121500 chr7B 96.335 382 10 3 5487 5867 186861778 186862156 6.840000e-175 625.0
32 TraesCS5B01G121500 chr7B 95.065 385 14 5 5487 5868 74205613 74205231 1.150000e-167 601.0
33 TraesCS5B01G121500 chr7B 94.778 383 14 5 5487 5866 436766098 436766477 6.940000e-165 592.0
34 TraesCS5B01G121500 chr6B 95.299 1170 40 10 2275 3434 346316660 346317824 0.000000e+00 1842.0
35 TraesCS5B01G121500 chr6B 96.171 1097 39 3 2275 3370 552133665 552132571 0.000000e+00 1790.0
36 TraesCS5B01G121500 chr6B 93.862 668 30 3 3368 4024 346317668 346318335 0.000000e+00 996.0
37 TraesCS5B01G121500 chr6B 95.013 381 17 2 5487 5866 18237240 18237619 1.490000e-166 597.0
38 TraesCS5B01G121500 chr7A 96.171 1097 37 3 2275 3370 692306023 692307115 0.000000e+00 1788.0
39 TraesCS5B01G121500 chr7A 83.192 946 91 31 6361 7270 62528797 62529710 0.000000e+00 804.0
40 TraesCS5B01G121500 chr7A 83.104 509 51 14 4040 4525 62527427 62527923 1.600000e-116 431.0
41 TraesCS5B01G121500 chr7A 78.344 628 81 27 1662 2274 62526824 62527411 9.910000e-94 355.0
42 TraesCS5B01G121500 chr7A 86.325 117 14 2 500 614 705068138 705068022 8.460000e-25 126.0
43 TraesCS5B01G121500 chr4B 95.423 1136 17 13 6897 8029 66106513 66105410 0.000000e+00 1777.0
44 TraesCS5B01G121500 chr4B 90.729 658 58 3 3376 4032 184484026 184484681 0.000000e+00 874.0
45 TraesCS5B01G121500 chr4B 93.706 572 27 6 259 827 449392997 449393562 0.000000e+00 848.0
46 TraesCS5B01G121500 chr3B 95.380 1104 48 2 2275 3376 276490917 276489815 0.000000e+00 1753.0
47 TraesCS5B01G121500 chr3B 96.084 383 11 3 5487 5868 695554372 695554751 8.850000e-174 621.0
48 TraesCS5B01G121500 chr3B 80.249 481 67 12 6469 6948 4449730 4450183 3.590000e-88 337.0
49 TraesCS5B01G121500 chr3B 79.429 350 38 19 257 578 788105304 788104961 4.880000e-52 217.0
50 TraesCS5B01G121500 chr2B 95.359 1099 48 3 2273 3370 464438339 464439435 0.000000e+00 1744.0
51 TraesCS5B01G121500 chr2B 93.113 755 47 5 3269 4022 329476031 329475281 0.000000e+00 1101.0
52 TraesCS5B01G121500 chr2B 93.902 656 37 3 3368 4022 221095567 221096220 0.000000e+00 987.0
53 TraesCS5B01G121500 chr2B 94.845 388 12 7 5487 5869 116351046 116350662 4.150000e-167 599.0
54 TraesCS5B01G121500 chr4A 84.012 1301 133 36 6014 7268 674603671 674604942 0.000000e+00 1181.0
55 TraesCS5B01G121500 chr4A 94.311 668 26 8 3367 4023 517887964 517887298 0.000000e+00 1013.0
56 TraesCS5B01G121500 chr4A 88.830 752 69 8 6026 6767 674555622 674556368 0.000000e+00 909.0
57 TraesCS5B01G121500 chr4A 82.549 510 62 16 4040 4525 674602938 674603444 2.680000e-114 424.0
58 TraesCS5B01G121500 chr4A 81.495 535 67 21 4020 4525 674554851 674555382 2.090000e-110 411.0
59 TraesCS5B01G121500 chr4A 76.849 622 84 31 1662 2264 674602335 674602915 6.090000e-76 296.0
60 TraesCS5B01G121500 chr4A 76.726 623 84 28 1662 2274 674554287 674554858 2.830000e-74 291.0
61 TraesCS5B01G121500 chrUn 89.096 752 72 8 6027 6775 91246523 91245779 0.000000e+00 926.0
62 TraesCS5B01G121500 chrUn 78.435 626 82 24 1662 2274 91247975 91247390 7.660000e-95 359.0
63 TraesCS5B01G121500 chrUn 89.818 275 28 0 4040 4314 91247374 91247100 3.560000e-93 353.0
64 TraesCS5B01G121500 chr1A 95.026 382 15 4 5487 5866 121132901 121132522 1.490000e-166 597.0
65 TraesCS5B01G121500 chr1A 85.831 367 42 6 256 614 256960250 256959886 1.640000e-101 381.0
66 TraesCS5B01G121500 chr6D 83.275 568 61 19 255 807 37736651 37736103 7.240000e-135 492.0
67 TraesCS5B01G121500 chr1D 88.818 313 24 5 255 559 488506058 488505749 2.740000e-99 374.0
68 TraesCS5B01G121500 chr1D 80.000 125 16 7 458 573 461079499 461079375 5.160000e-12 84.2
69 TraesCS5B01G121500 chr3A 85.789 190 22 5 417 605 556529365 556529550 6.360000e-46 196.0
70 TraesCS5B01G121500 chr3D 81.152 191 26 7 6959 7145 2258092 2258276 2.340000e-30 145.0
71 TraesCS5B01G121500 chr3D 87.619 105 13 0 500 604 578274045 578274149 1.090000e-23 122.0
72 TraesCS5B01G121500 chr7D 87.179 117 13 1 500 614 613490937 613490821 1.820000e-26 132.0
73 TraesCS5B01G121500 chr2D 87.387 111 12 2 500 609 648289493 648289602 8.460000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G121500 chr5B 216652460 216660488 8028 True 14827.000000 14827 100.000000 1 8029 1 chr5B.!!$R1 8028
1 TraesCS5B01G121500 chr5B 291075962 291077058 1096 True 1749.000000 1749 95.446000 2274 3370 1 chr5B.!!$R2 1096
2 TraesCS5B01G121500 chr5B 707448010 707448673 663 False 963.000000 963 93.083000 3368 4022 1 chr5B.!!$F2 654
3 TraesCS5B01G121500 chr5B 138347664 138348317 653 False 920.000000 920 92.073000 3368 4022 1 chr5B.!!$F1 654
4 TraesCS5B01G121500 chr5B 545087164 545087673 509 True 527.000000 527 85.606000 253 769 1 chr5B.!!$R4 516
5 TraesCS5B01G121500 chr5D 193632681 193637614 4933 True 1976.250000 3655 95.683500 990 8029 4 chr5D.!!$R2 7039
6 TraesCS5B01G121500 chr5A 253598797 253605854 7057 False 1845.500000 2490 96.281500 1445 8029 4 chr5A.!!$F4 6584
7 TraesCS5B01G121500 chr5A 253591481 253593448 1967 False 564.500000 752 94.279000 1 1449 2 chr5A.!!$F3 1448
8 TraesCS5B01G121500 chr1B 117184223 117185465 1242 True 1960.000000 1960 95.116000 2749 3994 1 chr1B.!!$R1 1245
9 TraesCS5B01G121500 chr1B 141118714 141119883 1169 True 1764.000000 1764 94.022000 2275 3434 1 chr1B.!!$R2 1159
10 TraesCS5B01G121500 chr1B 530962444 530963092 648 False 983.000000 983 93.902000 3368 4022 1 chr1B.!!$F1 654
11 TraesCS5B01G121500 chr1B 296492855 296493434 579 True 551.000000 551 84.167000 242 827 1 chr1B.!!$R3 585
12 TraesCS5B01G121500 chr2A 727178137 727179385 1248 False 1943.000000 1943 94.796000 2749 3994 1 chr2A.!!$F2 1245
13 TraesCS5B01G121500 chr2A 762153464 762154119 655 False 924.000000 924 92.097000 3368 4024 1 chr2A.!!$F3 656
14 TraesCS5B01G121500 chr7B 323203150 323204385 1235 True 1882.000000 1882 94.075000 2749 3994 1 chr7B.!!$R2 1245
15 TraesCS5B01G121500 chr7B 16918394 16919378 984 False 1354.000000 1354 91.257000 2980 3994 1 chr7B.!!$F1 1014
16 TraesCS5B01G121500 chr7B 45060609 45061268 659 False 889.000000 889 91.212000 3368 4017 1 chr7B.!!$F2 649
17 TraesCS5B01G121500 chr6B 552132571 552133665 1094 True 1790.000000 1790 96.171000 2275 3370 1 chr6B.!!$R1 1095
18 TraesCS5B01G121500 chr6B 346316660 346318335 1675 False 1419.000000 1842 94.580500 2275 4024 2 chr6B.!!$F2 1749
19 TraesCS5B01G121500 chr7A 692306023 692307115 1092 False 1788.000000 1788 96.171000 2275 3370 1 chr7A.!!$F1 1095
20 TraesCS5B01G121500 chr7A 62526824 62529710 2886 False 530.000000 804 81.546667 1662 7270 3 chr7A.!!$F2 5608
21 TraesCS5B01G121500 chr4B 66105410 66106513 1103 True 1777.000000 1777 95.423000 6897 8029 1 chr4B.!!$R1 1132
22 TraesCS5B01G121500 chr4B 184484026 184484681 655 False 874.000000 874 90.729000 3376 4032 1 chr4B.!!$F1 656
23 TraesCS5B01G121500 chr4B 449392997 449393562 565 False 848.000000 848 93.706000 259 827 1 chr4B.!!$F2 568
24 TraesCS5B01G121500 chr3B 276489815 276490917 1102 True 1753.000000 1753 95.380000 2275 3376 1 chr3B.!!$R1 1101
25 TraesCS5B01G121500 chr2B 464438339 464439435 1096 False 1744.000000 1744 95.359000 2273 3370 1 chr2B.!!$F2 1097
26 TraesCS5B01G121500 chr2B 329475281 329476031 750 True 1101.000000 1101 93.113000 3269 4022 1 chr2B.!!$R2 753
27 TraesCS5B01G121500 chr2B 221095567 221096220 653 False 987.000000 987 93.902000 3368 4022 1 chr2B.!!$F1 654
28 TraesCS5B01G121500 chr4A 517887298 517887964 666 True 1013.000000 1013 94.311000 3367 4023 1 chr4A.!!$R1 656
29 TraesCS5B01G121500 chr4A 674602335 674604942 2607 False 633.666667 1181 81.136667 1662 7268 3 chr4A.!!$F2 5606
30 TraesCS5B01G121500 chr4A 674554287 674556368 2081 False 537.000000 909 82.350333 1662 6767 3 chr4A.!!$F1 5105
31 TraesCS5B01G121500 chrUn 91245779 91247975 2196 True 546.000000 926 85.783000 1662 6775 3 chrUn.!!$R1 5113
32 TraesCS5B01G121500 chr6D 37736103 37736651 548 True 492.000000 492 83.275000 255 807 1 chr6D.!!$R1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
642 654 0.313672 TTCCGCAAGAACACCAATGC 59.686 50.000 0.0 0.0 43.02 3.56 F
1331 2500 0.107410 TTGCTGTGTTGAGGTCCGTT 60.107 50.000 0.0 0.0 0.00 4.44 F
1412 2581 0.179215 CATTGCGACGAAAGAGTGGC 60.179 55.000 0.0 0.0 44.43 5.01 F
3075 4310 1.367840 GCGGGTAGCGATCCAAGAT 59.632 57.895 0.0 0.0 35.41 2.40 F
3808 6828 1.028905 CTAGAAGGAGGGCACGAGAG 58.971 60.000 0.0 0.0 0.00 3.20 F
5514 8683 0.250510 TGCACCCGCATGAACAGTAA 60.251 50.000 0.0 0.0 45.36 2.24 F
5725 8894 0.107654 GCCACGCCTTCTAGGAATGT 60.108 55.000 0.0 0.0 37.67 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2271 3505 1.207089 TCTAGCAGCGCCATAACAACT 59.793 47.619 2.29 0.0 0.00 3.16 R
2690 3925 0.107654 GGATCCAGGTGGCTGTACAC 60.108 60.000 6.95 0.0 40.60 2.90 R
3095 4330 0.617413 CCAGCAGATCAAGTCCCTGT 59.383 55.000 0.00 0.0 0.00 4.00 R
3944 6967 2.044555 GGGTCGTTTGCTTAGGGGC 61.045 63.158 0.00 0.0 0.00 5.80 R
5616 8785 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.0 37.67 3.01 R
6837 10332 1.670791 TCTGGGGAACACACGAAAAC 58.329 50.000 0.00 0.0 0.00 2.43 R
7279 10815 4.067896 AGATTGGCTGTTACTCACACAAG 58.932 43.478 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 2.164219 AGCGTGGGTTTAGCAATTGATG 59.836 45.455 10.34 0.00 0.00 3.07
79 80 1.127766 GCGCAACATCATCACACGTTA 59.872 47.619 0.30 0.00 0.00 3.18
80 81 2.223021 GCGCAACATCATCACACGTTAT 60.223 45.455 0.30 0.00 0.00 1.89
128 129 9.451002 CATGAAAATCAATAGCTATCCTCTCAT 57.549 33.333 6.72 8.11 0.00 2.90
129 130 8.843885 TGAAAATCAATAGCTATCCTCTCATG 57.156 34.615 6.72 0.00 0.00 3.07
196 197 0.394899 CTTGGGCCAAGGATGAGGTC 60.395 60.000 34.03 0.00 37.77 3.85
228 229 0.325390 GTAGGGGCAGTAGTGGAGGT 60.325 60.000 0.00 0.00 0.00 3.85
229 230 1.063417 GTAGGGGCAGTAGTGGAGGTA 60.063 57.143 0.00 0.00 0.00 3.08
237 238 2.952978 CAGTAGTGGAGGTAGTAGCAGG 59.047 54.545 1.58 0.00 0.00 4.85
246 247 2.158415 AGGTAGTAGCAGGGCCGTAATA 60.158 50.000 0.00 0.00 0.00 0.98
247 248 2.230750 GGTAGTAGCAGGGCCGTAATAG 59.769 54.545 0.00 0.00 0.00 1.73
306 307 2.970324 GTTCCGCCACTCGTGCAA 60.970 61.111 0.00 0.00 36.19 4.08
543 553 1.263217 GAAGTCGTTCCGCAACAACAT 59.737 47.619 0.00 0.00 32.14 2.71
586 598 7.945033 AAGACGAAAACAAATATGCAACATT 57.055 28.000 0.00 0.00 0.00 2.71
631 643 4.327357 CCGCAATAGTCTATATTCCGCAAG 59.673 45.833 0.00 0.00 0.00 4.01
642 654 0.313672 TTCCGCAAGAACACCAATGC 59.686 50.000 0.00 0.00 43.02 3.56
643 655 0.821301 TCCGCAAGAACACCAATGCA 60.821 50.000 0.00 0.00 38.69 3.96
746 762 4.986659 GCAAAGAAAGATTCTGCAACACAT 59.013 37.500 0.00 0.00 40.59 3.21
811 829 1.234615 ATCAAACAACTGTCGGGGCG 61.235 55.000 0.00 0.00 0.00 6.13
823 841 0.391130 TCGGGGCGACTGATCTTTTG 60.391 55.000 0.00 0.00 0.00 2.44
827 845 2.095212 GGGGCGACTGATCTTTTGAAAC 60.095 50.000 0.00 0.00 0.00 2.78
828 846 2.095212 GGGCGACTGATCTTTTGAAACC 60.095 50.000 0.00 0.00 0.00 3.27
829 847 2.095212 GGCGACTGATCTTTTGAAACCC 60.095 50.000 0.00 0.00 0.00 4.11
830 848 2.412847 GCGACTGATCTTTTGAAACCCG 60.413 50.000 0.00 0.00 0.00 5.28
831 849 3.064207 CGACTGATCTTTTGAAACCCGA 58.936 45.455 0.00 0.00 0.00 5.14
832 850 3.120649 CGACTGATCTTTTGAAACCCGAC 60.121 47.826 0.00 0.00 0.00 4.79
833 851 2.806244 ACTGATCTTTTGAAACCCGACG 59.194 45.455 0.00 0.00 0.00 5.12
834 852 1.533731 TGATCTTTTGAAACCCGACGC 59.466 47.619 0.00 0.00 0.00 5.19
835 853 0.515564 ATCTTTTGAAACCCGACGCG 59.484 50.000 3.53 3.53 0.00 6.01
836 854 0.810823 TCTTTTGAAACCCGACGCGT 60.811 50.000 13.85 13.85 0.00 6.01
837 855 0.860533 CTTTTGAAACCCGACGCGTA 59.139 50.000 13.97 0.00 0.00 4.42
838 856 0.860533 TTTTGAAACCCGACGCGTAG 59.139 50.000 13.97 13.30 0.00 3.51
864 882 3.566351 CCCCTAATAGAAAAGCCCCTTG 58.434 50.000 0.00 0.00 0.00 3.61
883 901 1.257055 GCTGCAGGTAATGGGCCAAA 61.257 55.000 17.12 0.00 0.00 3.28
891 909 4.709397 CAGGTAATGGGCCAAATAGTCAAA 59.291 41.667 11.89 0.00 0.00 2.69
904 922 7.360776 GCCAAATAGTCAAAGACTCAAGAGAAG 60.361 40.741 2.48 0.00 42.40 2.85
905 923 7.875041 CCAAATAGTCAAAGACTCAAGAGAAGA 59.125 37.037 2.48 0.00 42.40 2.87
906 924 8.707839 CAAATAGTCAAAGACTCAAGAGAAGAC 58.292 37.037 2.48 4.55 42.40 3.01
907 925 4.865776 AGTCAAAGACTCAAGAGAAGACG 58.134 43.478 3.73 0.00 38.71 4.18
908 926 3.427193 GTCAAAGACTCAAGAGAAGACGC 59.573 47.826 3.73 0.00 0.00 5.19
909 927 3.068165 TCAAAGACTCAAGAGAAGACGCA 59.932 43.478 3.73 0.00 0.00 5.24
910 928 3.735237 AAGACTCAAGAGAAGACGCAA 57.265 42.857 3.73 0.00 0.00 4.85
911 929 3.019933 AGACTCAAGAGAAGACGCAAC 57.980 47.619 3.73 0.00 0.00 4.17
912 930 2.625790 AGACTCAAGAGAAGACGCAACT 59.374 45.455 3.73 0.00 0.00 3.16
913 931 3.821600 AGACTCAAGAGAAGACGCAACTA 59.178 43.478 3.73 0.00 0.00 2.24
914 932 4.278669 AGACTCAAGAGAAGACGCAACTAA 59.721 41.667 3.73 0.00 0.00 2.24
942 960 2.820037 GCTGGGCCGTTAGCTGAC 60.820 66.667 15.59 0.00 43.05 3.51
981 2150 0.885196 GACCTCTTCGCTCTCACACT 59.115 55.000 0.00 0.00 0.00 3.55
982 2151 0.885196 ACCTCTTCGCTCTCACACTC 59.115 55.000 0.00 0.00 0.00 3.51
983 2152 0.884514 CCTCTTCGCTCTCACACTCA 59.115 55.000 0.00 0.00 0.00 3.41
984 2153 1.402194 CCTCTTCGCTCTCACACTCAC 60.402 57.143 0.00 0.00 0.00 3.51
985 2154 1.268079 CTCTTCGCTCTCACACTCACA 59.732 52.381 0.00 0.00 0.00 3.58
986 2155 1.268079 TCTTCGCTCTCACACTCACAG 59.732 52.381 0.00 0.00 0.00 3.66
987 2156 1.268079 CTTCGCTCTCACACTCACAGA 59.732 52.381 0.00 0.00 0.00 3.41
988 2157 0.593618 TCGCTCTCACACTCACAGAC 59.406 55.000 0.00 0.00 0.00 3.51
1049 2218 4.150454 CTCCTCCTCCCTCGCCCT 62.150 72.222 0.00 0.00 0.00 5.19
1063 2232 1.078637 GCCCTAAACCCACCTCGTC 60.079 63.158 0.00 0.00 0.00 4.20
1085 2254 1.772156 GCCTCCCTTATCCCCTGCT 60.772 63.158 0.00 0.00 0.00 4.24
1131 2300 3.905678 CGCCGAATCGCCTCCTCT 61.906 66.667 0.00 0.00 0.00 3.69
1294 2463 0.178924 ATGCCAGGTGCCCTTTTTCT 60.179 50.000 0.00 0.00 40.16 2.52
1331 2500 0.107410 TTGCTGTGTTGAGGTCCGTT 60.107 50.000 0.00 0.00 0.00 4.44
1409 2578 0.320771 AGCCATTGCGACGAAAGAGT 60.321 50.000 0.00 0.00 44.33 3.24
1412 2581 0.179215 CATTGCGACGAAAGAGTGGC 60.179 55.000 0.00 0.00 44.43 5.01
1430 2599 2.753966 CGGGGAGCGTTGCTGATTG 61.754 63.158 0.00 0.00 39.88 2.67
1468 2637 4.734854 CGAGCGACCATTTTATTCCATTTG 59.265 41.667 0.00 0.00 0.00 2.32
1469 2638 4.432712 AGCGACCATTTTATTCCATTTGC 58.567 39.130 0.00 0.00 0.00 3.68
1470 2639 4.081752 AGCGACCATTTTATTCCATTTGCA 60.082 37.500 0.00 0.00 0.00 4.08
1472 2641 5.050837 GCGACCATTTTATTCCATTTGCATC 60.051 40.000 0.00 0.00 0.00 3.91
1473 2642 5.173673 CGACCATTTTATTCCATTTGCATCG 59.826 40.000 0.00 0.00 0.00 3.84
1547 2720 4.463186 AGTGTAATCTCTGTGAGGGTACAC 59.537 45.833 20.84 20.84 42.96 2.90
1555 2728 2.834549 CTGTGAGGGTACACCATCTCTT 59.165 50.000 13.68 0.00 46.28 2.85
1556 2729 4.023980 CTGTGAGGGTACACCATCTCTTA 58.976 47.826 13.68 0.00 46.28 2.10
1557 2730 4.620723 TGTGAGGGTACACCATCTCTTAT 58.379 43.478 13.68 0.00 46.28 1.73
1558 2731 5.030147 TGTGAGGGTACACCATCTCTTATT 58.970 41.667 13.68 0.00 46.28 1.40
1559 2732 6.199376 TGTGAGGGTACACCATCTCTTATTA 58.801 40.000 13.68 0.00 46.28 0.98
1560 2733 6.844388 TGTGAGGGTACACCATCTCTTATTAT 59.156 38.462 13.68 0.00 46.28 1.28
1604 2777 9.930693 AAAAATCTTCTACTGTAGATTCGAAGT 57.069 29.630 17.60 0.00 38.69 3.01
1875 3088 6.527423 CCCACTTTGTAACTGTTTACCTCTA 58.473 40.000 0.00 0.00 37.39 2.43
1876 3089 7.166167 CCCACTTTGTAACTGTTTACCTCTAT 58.834 38.462 0.00 0.00 37.39 1.98
1877 3090 8.316214 CCCACTTTGTAACTGTTTACCTCTATA 58.684 37.037 0.00 0.00 37.39 1.31
1878 3091 9.886132 CCACTTTGTAACTGTTTACCTCTATAT 57.114 33.333 0.00 0.00 37.39 0.86
1920 3144 8.292444 TGTTTGATGCTTAATAATTAGTGCCT 57.708 30.769 0.00 0.00 0.00 4.75
1962 3187 7.455008 TCAAGTTACTCCAGAAGTCCTCTATTT 59.545 37.037 0.00 0.00 39.55 1.40
2024 3249 9.457436 TTCTTAATGATAAGGTTTCTTACACCC 57.543 33.333 0.00 0.00 39.24 4.61
2236 3470 3.125316 CCGAAGAGGTAATTCACTTGTGC 59.875 47.826 0.00 0.00 34.51 4.57
2300 3534 2.725312 CGCTGCTAGAAGGAGGGCA 61.725 63.158 0.00 0.00 39.48 5.36
2454 3689 2.802719 CTTACTTGGCCCCTAAGCAAA 58.197 47.619 0.00 0.00 0.00 3.68
2514 3749 3.323979 CCATTAGGCCCATTACGTACTCT 59.676 47.826 0.00 0.00 0.00 3.24
2588 3823 5.416947 ACCAACTTATAACCATGACTCGAC 58.583 41.667 0.00 0.00 0.00 4.20
2638 3873 2.488153 GCCTTTTACATCTCGGCTTGTT 59.512 45.455 0.00 0.00 37.76 2.83
2690 3925 1.976045 GCTTTATTTTGGACGTGCACG 59.024 47.619 35.99 35.99 46.33 5.34
2851 4086 2.038690 TCGCAGACTTTGAGGTCGT 58.961 52.632 0.00 0.00 40.76 4.34
2876 4111 2.573340 GGGGAAAACAGCATGCCG 59.427 61.111 15.66 6.75 42.53 5.69
3075 4310 1.367840 GCGGGTAGCGATCCAAGAT 59.632 57.895 0.00 0.00 35.41 2.40
3173 4408 4.773117 GGTCGTCGCACTCCCGTC 62.773 72.222 0.00 0.00 0.00 4.79
3309 4544 4.600576 GCGGAGGCTGCTAGGAGC 62.601 72.222 26.66 26.66 42.82 4.70
3310 4545 4.277593 CGGAGGCTGCTAGGAGCG 62.278 72.222 27.27 11.81 46.26 5.03
3334 4569 4.982701 GCCACTGCAGCCAGGGTT 62.983 66.667 15.27 0.00 41.04 4.11
3335 4570 2.987547 CCACTGCAGCCAGGGTTG 60.988 66.667 15.27 2.05 41.04 3.77
3337 4572 4.290622 ACTGCAGCCAGGGTTGGG 62.291 66.667 15.27 0.00 45.16 4.12
3354 4589 4.856801 GCGGTGGTGGCGATGGAT 62.857 66.667 0.00 0.00 0.00 3.41
3355 4590 2.896854 CGGTGGTGGCGATGGATG 60.897 66.667 0.00 0.00 0.00 3.51
3356 4591 2.516930 GGTGGTGGCGATGGATGG 60.517 66.667 0.00 0.00 0.00 3.51
3357 4592 3.211963 GTGGTGGCGATGGATGGC 61.212 66.667 0.00 0.00 0.00 4.40
3358 4593 3.726144 TGGTGGCGATGGATGGCA 61.726 61.111 0.00 0.00 39.86 4.92
3359 4594 2.903855 GGTGGCGATGGATGGCAG 60.904 66.667 0.00 0.00 43.05 4.85
3360 4595 3.589881 GTGGCGATGGATGGCAGC 61.590 66.667 0.00 0.00 43.05 5.25
3361 4596 3.800833 TGGCGATGGATGGCAGCT 61.801 61.111 1.50 0.00 36.93 4.24
3362 4597 3.285215 GGCGATGGATGGCAGCTG 61.285 66.667 10.11 10.11 32.78 4.24
3363 4598 3.962421 GCGATGGATGGCAGCTGC 61.962 66.667 30.88 30.88 41.14 5.25
3364 4599 2.515290 CGATGGATGGCAGCTGCA 60.515 61.111 37.63 24.48 44.36 4.41
3365 4600 2.543802 CGATGGATGGCAGCTGCAG 61.544 63.158 37.63 10.11 44.36 4.41
3366 4601 2.833582 ATGGATGGCAGCTGCAGC 60.834 61.111 37.63 31.53 44.36 5.25
3414 6347 3.819652 TGCCACTGCAACCAGGGT 61.820 61.111 0.00 0.00 46.66 4.34
3415 6348 2.521708 GCCACTGCAACCAGGGTT 60.522 61.111 0.00 0.00 41.04 4.11
3435 6368 4.856801 GCGGTGGTGGCGATGGAT 62.857 66.667 0.00 0.00 0.00 3.41
3436 6369 2.896854 CGGTGGTGGCGATGGATG 60.897 66.667 0.00 0.00 0.00 3.51
3437 6370 2.589540 GGTGGTGGCGATGGATGA 59.410 61.111 0.00 0.00 0.00 2.92
3438 6371 1.819632 GGTGGTGGCGATGGATGAC 60.820 63.158 0.00 0.00 0.00 3.06
3439 6372 1.078497 GTGGTGGCGATGGATGACA 60.078 57.895 0.00 0.00 0.00 3.58
3440 6373 1.091771 GTGGTGGCGATGGATGACAG 61.092 60.000 0.00 0.00 0.00 3.51
3441 6374 2.182842 GGTGGCGATGGATGACAGC 61.183 63.158 0.00 0.00 0.00 4.40
3442 6375 1.153289 GTGGCGATGGATGACAGCT 60.153 57.895 0.00 0.00 32.00 4.24
3443 6376 1.153309 TGGCGATGGATGACAGCTG 60.153 57.895 13.48 13.48 32.00 4.24
3444 6377 2.541120 GGCGATGGATGACAGCTGC 61.541 63.158 15.27 7.45 35.40 5.25
3445 6378 1.816679 GCGATGGATGACAGCTGCA 60.817 57.895 15.27 13.46 35.90 4.41
3446 6379 1.773054 GCGATGGATGACAGCTGCAG 61.773 60.000 15.27 10.11 35.90 4.41
3447 6380 1.773054 CGATGGATGACAGCTGCAGC 61.773 60.000 31.53 31.53 42.49 5.25
3802 6822 2.725312 CGCTGCTAGAAGGAGGGCA 61.725 63.158 0.00 0.00 39.48 5.36
3808 6828 1.028905 CTAGAAGGAGGGCACGAGAG 58.971 60.000 0.00 0.00 0.00 3.20
4017 7040 4.202326 CCATTAGGCCCATTACGTACTCTT 60.202 45.833 0.00 0.00 0.00 2.85
4050 7076 7.930865 AGTATTTTACGGTTAAGTGGTTGTACA 59.069 33.333 0.00 0.00 0.00 2.90
4084 7110 6.723977 ACTCAGAAGACTTGAGAAAGGATAGT 59.276 38.462 10.51 0.00 34.13 2.12
4397 7548 1.337703 GTGTTGCTGATTTGCTGTCCA 59.662 47.619 0.00 0.00 0.00 4.02
4406 7557 4.264253 TGATTTGCTGTCCATGTTCCTAG 58.736 43.478 0.00 0.00 0.00 3.02
4437 7593 1.675641 CAAGGTAGCAGGCACCACC 60.676 63.158 12.96 8.13 38.62 4.61
4455 7611 1.886542 ACCGCCTTCTTTCAAATGACC 59.113 47.619 0.00 0.00 0.00 4.02
4458 7614 2.095059 CGCCTTCTTTCAAATGACCTGG 60.095 50.000 0.00 0.00 0.00 4.45
4583 7747 3.187227 CGCTCAAGTATATTGGTGCATCC 59.813 47.826 0.00 0.00 0.00 3.51
4882 8046 6.633856 AGCAATATTACAGCAAAGGGAAAAG 58.366 36.000 0.00 0.00 0.00 2.27
5210 8377 5.476945 AGTGGGTAAACCTAAAATCAAGCAG 59.523 40.000 0.00 0.00 41.11 4.24
5218 8385 4.082125 CCTAAAATCAAGCAGACACCCTT 58.918 43.478 0.00 0.00 0.00 3.95
5389 8556 7.897800 GTGCCAATATTACTTCGAAAATTTTGC 59.102 33.333 8.47 12.24 0.00 3.68
5473 8642 1.962807 ACTGATCAGCTAGCTGGCTAG 59.037 52.381 37.60 31.32 46.41 3.42
5474 8643 2.237643 CTGATCAGCTAGCTGGCTAGA 58.762 52.381 37.60 22.32 46.56 2.43
5475 8644 2.827322 CTGATCAGCTAGCTGGCTAGAT 59.173 50.000 37.60 25.50 46.56 1.98
5476 8645 4.015764 CTGATCAGCTAGCTGGCTAGATA 58.984 47.826 37.60 21.22 46.56 1.98
5477 8646 4.015764 TGATCAGCTAGCTGGCTAGATAG 58.984 47.826 37.60 17.19 46.56 2.08
5482 8651 2.432444 CTAGCTGGCTAGATAGCTCGT 58.568 52.381 21.08 4.81 46.76 4.18
5483 8652 0.958091 AGCTGGCTAGATAGCTCGTG 59.042 55.000 13.54 1.88 46.76 4.35
5484 8653 1.477740 AGCTGGCTAGATAGCTCGTGA 60.478 52.381 13.54 0.00 46.76 4.35
5485 8654 3.012129 AGCTGGCTAGATAGCTCGTGAA 61.012 50.000 13.54 0.00 46.76 3.18
5486 8655 4.859326 AGCTGGCTAGATAGCTCGTGAAG 61.859 52.174 13.54 2.58 46.76 3.02
5487 8656 7.717111 TAGCTGGCTAGATAGCTCGTGAAGA 62.717 48.000 20.28 3.55 46.76 2.87
5498 8667 3.089573 CTCGTGAAGAGCTCATATGCA 57.910 47.619 17.77 0.00 40.54 3.96
5499 8668 2.793790 CTCGTGAAGAGCTCATATGCAC 59.206 50.000 17.77 9.46 40.54 4.57
5500 8669 1.863454 CGTGAAGAGCTCATATGCACC 59.137 52.381 17.77 0.00 36.14 5.01
5501 8670 2.216898 GTGAAGAGCTCATATGCACCC 58.783 52.381 17.77 0.00 36.14 4.61
5502 8671 1.202568 TGAAGAGCTCATATGCACCCG 60.203 52.381 17.77 0.00 34.99 5.28
5503 8672 0.533755 AAGAGCTCATATGCACCCGC 60.534 55.000 17.77 0.00 39.24 6.13
5512 8681 2.112928 TGCACCCGCATGAACAGT 59.887 55.556 0.00 0.00 45.36 3.55
5513 8682 1.373059 TGCACCCGCATGAACAGTA 59.627 52.632 0.00 0.00 45.36 2.74
5514 8683 0.250510 TGCACCCGCATGAACAGTAA 60.251 50.000 0.00 0.00 45.36 2.24
5515 8684 0.878416 GCACCCGCATGAACAGTAAA 59.122 50.000 0.00 0.00 38.36 2.01
5516 8685 1.268352 GCACCCGCATGAACAGTAAAA 59.732 47.619 0.00 0.00 38.36 1.52
5517 8686 2.094752 GCACCCGCATGAACAGTAAAAT 60.095 45.455 0.00 0.00 38.36 1.82
5518 8687 3.500982 CACCCGCATGAACAGTAAAATG 58.499 45.455 0.00 0.00 0.00 2.32
5519 8688 2.491693 ACCCGCATGAACAGTAAAATGG 59.508 45.455 0.00 0.00 0.00 3.16
5520 8689 2.752354 CCCGCATGAACAGTAAAATGGA 59.248 45.455 0.00 0.00 0.00 3.41
5521 8690 3.192422 CCCGCATGAACAGTAAAATGGAA 59.808 43.478 0.00 0.00 0.00 3.53
5522 8691 4.321601 CCCGCATGAACAGTAAAATGGAAA 60.322 41.667 0.00 0.00 0.00 3.13
5523 8692 5.226396 CCGCATGAACAGTAAAATGGAAAA 58.774 37.500 0.00 0.00 0.00 2.29
5524 8693 5.694006 CCGCATGAACAGTAAAATGGAAAAA 59.306 36.000 0.00 0.00 0.00 1.94
5582 8751 9.487790 TTTTTGAGAGAAACATTGACAAAAGTT 57.512 25.926 0.00 0.00 37.18 2.66
5583 8752 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
5584 8753 7.630242 TGAGAGAAACATTGACAAAAGTTCT 57.370 32.000 9.09 9.17 0.00 3.01
5585 8754 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
5586 8755 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
5587 8756 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
5588 8757 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
5589 8758 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
5590 8759 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
5591 8760 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
5592 8761 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
5593 8762 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
5594 8763 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
5595 8764 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
5596 8765 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
5597 8766 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
5598 8767 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
5599 8768 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
5600 8769 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
5601 8770 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
5602 8771 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
5603 8772 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
5604 8773 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
5605 8774 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
5606 8775 4.339872 AAGTGCCTGCAAAAATTCATCA 57.660 36.364 0.00 0.00 0.00 3.07
5607 8776 4.546829 AGTGCCTGCAAAAATTCATCAT 57.453 36.364 0.00 0.00 0.00 2.45
5608 8777 4.250464 AGTGCCTGCAAAAATTCATCATG 58.750 39.130 0.00 0.00 0.00 3.07
5609 8778 4.020928 AGTGCCTGCAAAAATTCATCATGA 60.021 37.500 0.00 0.00 0.00 3.07
5610 8779 4.691685 GTGCCTGCAAAAATTCATCATGAA 59.308 37.500 1.59 1.59 41.09 2.57
5611 8780 5.179742 GTGCCTGCAAAAATTCATCATGAAA 59.820 36.000 3.63 0.00 40.12 2.69
5612 8781 5.941058 TGCCTGCAAAAATTCATCATGAAAT 59.059 32.000 3.63 0.00 40.12 2.17
5613 8782 6.092944 TGCCTGCAAAAATTCATCATGAAATC 59.907 34.615 3.63 0.00 40.12 2.17
5614 8783 6.092944 GCCTGCAAAAATTCATCATGAAATCA 59.907 34.615 3.63 0.00 40.12 2.57
5615 8784 7.461107 CCTGCAAAAATTCATCATGAAATCAC 58.539 34.615 3.63 0.00 40.12 3.06
5616 8785 7.118535 CCTGCAAAAATTCATCATGAAATCACA 59.881 33.333 3.63 0.00 40.12 3.58
5617 8786 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
5618 8787 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
5619 8788 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
5620 8789 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
5621 8790 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
5622 8791 8.942338 AAATTCATCATGAAATCACATTCCTG 57.058 30.769 3.63 0.00 40.12 3.86
5623 8792 7.655521 ATTCATCATGAAATCACATTCCTGT 57.344 32.000 3.63 0.00 40.12 4.00
5624 8793 8.756486 ATTCATCATGAAATCACATTCCTGTA 57.244 30.769 3.63 0.00 40.12 2.74
5625 8794 8.578448 TTCATCATGAAATCACATTCCTGTAA 57.422 30.769 0.00 0.00 32.71 2.41
5626 8795 8.217131 TCATCATGAAATCACATTCCTGTAAG 57.783 34.615 0.00 0.00 33.14 2.34
5662 8831 8.898983 AAAAACAAATTCAGTGCTTCAAAATG 57.101 26.923 0.00 0.00 0.00 2.32
5663 8832 5.662211 ACAAATTCAGTGCTTCAAAATGC 57.338 34.783 0.00 0.00 0.00 3.56
5664 8833 4.209703 ACAAATTCAGTGCTTCAAAATGCG 59.790 37.500 0.00 0.00 0.00 4.73
5665 8834 3.648339 ATTCAGTGCTTCAAAATGCGT 57.352 38.095 0.00 0.00 0.00 5.24
5666 8835 3.435105 TTCAGTGCTTCAAAATGCGTT 57.565 38.095 0.00 0.00 0.00 4.84
5667 8836 3.435105 TCAGTGCTTCAAAATGCGTTT 57.565 38.095 0.00 0.00 0.00 3.60
5668 8837 3.114809 TCAGTGCTTCAAAATGCGTTTG 58.885 40.909 4.29 5.51 46.86 2.93
5683 8852 7.820044 AATGCGTTTGAAAGTAACTTTTTCA 57.180 28.000 0.00 0.00 41.40 2.69
5684 8853 6.862944 TGCGTTTGAAAGTAACTTTTTCAG 57.137 33.333 0.00 0.00 43.22 3.02
5685 8854 6.613233 TGCGTTTGAAAGTAACTTTTTCAGA 58.387 32.000 0.00 0.00 43.22 3.27
5686 8855 6.745450 TGCGTTTGAAAGTAACTTTTTCAGAG 59.255 34.615 0.00 0.67 43.22 3.35
5687 8856 6.745907 GCGTTTGAAAGTAACTTTTTCAGAGT 59.254 34.615 0.00 0.00 43.22 3.24
5688 8857 7.906527 GCGTTTGAAAGTAACTTTTTCAGAGTA 59.093 33.333 0.00 0.00 43.22 2.59
5689 8858 9.207042 CGTTTGAAAGTAACTTTTTCAGAGTAC 57.793 33.333 0.00 0.00 43.22 2.73
5720 8889 1.243902 TTTTTGCCACGCCTTCTAGG 58.756 50.000 0.00 0.00 38.80 3.02
5721 8890 0.398696 TTTTGCCACGCCTTCTAGGA 59.601 50.000 0.00 0.00 37.67 2.94
5722 8891 0.398696 TTTGCCACGCCTTCTAGGAA 59.601 50.000 0.00 0.00 37.67 3.36
5723 8892 0.618458 TTGCCACGCCTTCTAGGAAT 59.382 50.000 0.00 0.00 37.67 3.01
5724 8893 0.107703 TGCCACGCCTTCTAGGAATG 60.108 55.000 0.00 0.00 37.67 2.67
5725 8894 0.107654 GCCACGCCTTCTAGGAATGT 60.108 55.000 0.00 0.00 37.67 2.71
5726 8895 1.656652 CCACGCCTTCTAGGAATGTG 58.343 55.000 0.00 2.20 37.67 3.21
5727 8896 1.207089 CCACGCCTTCTAGGAATGTGA 59.793 52.381 12.05 0.00 37.67 3.58
5728 8897 2.158900 CCACGCCTTCTAGGAATGTGAT 60.159 50.000 12.05 0.00 37.67 3.06
5729 8898 3.535561 CACGCCTTCTAGGAATGTGATT 58.464 45.455 0.00 0.00 37.67 2.57
5730 8899 3.941483 CACGCCTTCTAGGAATGTGATTT 59.059 43.478 0.00 0.00 37.67 2.17
5731 8900 4.034510 CACGCCTTCTAGGAATGTGATTTC 59.965 45.833 0.00 0.00 37.67 2.17
5732 8901 4.191544 CGCCTTCTAGGAATGTGATTTCA 58.808 43.478 0.00 0.00 37.67 2.69
5733 8902 4.034510 CGCCTTCTAGGAATGTGATTTCAC 59.965 45.833 3.72 3.72 41.79 3.18
5734 8903 4.034510 GCCTTCTAGGAATGTGATTTCACG 59.965 45.833 6.24 0.00 43.30 4.35
5735 8904 5.419542 CCTTCTAGGAATGTGATTTCACGA 58.580 41.667 6.24 0.00 43.30 4.35
5736 8905 6.051717 CCTTCTAGGAATGTGATTTCACGAT 58.948 40.000 6.24 0.00 43.30 3.73
5737 8906 6.018425 CCTTCTAGGAATGTGATTTCACGATG 60.018 42.308 6.24 0.00 43.30 3.84
5738 8907 8.112406 CCTTCTAGGAATGTGATTTCACGATGA 61.112 40.741 6.24 0.00 43.30 2.92
5747 8916 6.450845 GTGATTTCACGATGAATTTTTGCA 57.549 33.333 0.00 0.00 36.11 4.08
5748 8917 6.519315 GTGATTTCACGATGAATTTTTGCAG 58.481 36.000 0.00 0.00 36.11 4.41
5749 8918 5.634439 TGATTTCACGATGAATTTTTGCAGG 59.366 36.000 0.00 0.00 36.11 4.85
5750 8919 2.945278 TCACGATGAATTTTTGCAGGC 58.055 42.857 0.00 0.00 0.00 4.85
5751 8920 2.295629 TCACGATGAATTTTTGCAGGCA 59.704 40.909 0.00 0.00 0.00 4.75
5752 8921 2.409378 CACGATGAATTTTTGCAGGCAC 59.591 45.455 0.00 0.00 0.00 5.01
5753 8922 2.297033 ACGATGAATTTTTGCAGGCACT 59.703 40.909 0.00 0.00 43.88 4.40
5754 8923 3.243839 ACGATGAATTTTTGCAGGCACTT 60.244 39.130 0.00 0.00 34.60 3.16
5755 8924 4.022416 ACGATGAATTTTTGCAGGCACTTA 60.022 37.500 0.00 0.00 34.60 2.24
5756 8925 4.560035 CGATGAATTTTTGCAGGCACTTAG 59.440 41.667 0.00 0.00 34.60 2.18
5757 8926 5.619757 CGATGAATTTTTGCAGGCACTTAGA 60.620 40.000 0.00 0.00 34.60 2.10
5758 8927 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
5759 8928 5.288804 TGAATTTTTGCAGGCACTTAGAAC 58.711 37.500 0.00 0.00 34.60 3.01
5760 8929 5.068987 TGAATTTTTGCAGGCACTTAGAACT 59.931 36.000 0.00 0.00 34.60 3.01
5761 8930 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
5762 8931 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
5763 8932 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
5764 8933 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
5765 8934 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
5766 8935 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
5767 8936 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
5768 8937 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
5769 8938 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
5770 8939 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
5771 8940 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
5772 8941 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
5773 8942 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
5774 8943 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
5775 8944 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
5776 8945 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
5777 8946 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
5778 8947 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
5779 8948 7.630242 AGAACTTTTGTCAATGTTTCTCTCA 57.370 32.000 6.10 0.00 31.96 3.27
5780 8949 8.055279 AGAACTTTTGTCAATGTTTCTCTCAA 57.945 30.769 6.10 0.00 31.96 3.02
5781 8950 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
5782 8951 9.139174 GAACTTTTGTCAATGTTTCTCTCAAAA 57.861 29.630 6.10 0.00 31.96 2.44
5783 8952 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
5830 8999 6.761731 TTTTTGATTTTACTGTTCATGCGG 57.238 33.333 0.00 0.00 0.00 5.69
5831 9000 4.433186 TTGATTTTACTGTTCATGCGGG 57.567 40.909 0.00 0.00 0.00 6.13
5832 9001 3.680490 TGATTTTACTGTTCATGCGGGA 58.320 40.909 0.00 0.00 0.00 5.14
5833 9002 3.689161 TGATTTTACTGTTCATGCGGGAG 59.311 43.478 0.00 0.00 0.00 4.30
5850 9019 1.070445 AGCATATGAGCTCGGGTGC 59.930 57.895 22.13 22.13 42.18 5.01
5851 9020 1.227645 GCATATGAGCTCGGGTGCA 60.228 57.895 23.72 2.95 34.99 4.57
5852 9021 1.226686 GCATATGAGCTCGGGTGCAG 61.227 60.000 23.72 7.32 34.99 4.41
5853 9022 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.00 34.99 4.26
5854 9023 1.001746 CATATGAGCTCGGGTGCAGAT 59.998 52.381 9.64 0.00 34.99 2.90
5855 9024 1.123077 TATGAGCTCGGGTGCAGATT 58.877 50.000 9.64 0.00 34.99 2.40
5856 9025 1.123077 ATGAGCTCGGGTGCAGATTA 58.877 50.000 9.64 0.00 34.99 1.75
5857 9026 0.461548 TGAGCTCGGGTGCAGATTAG 59.538 55.000 9.64 0.00 34.99 1.73
5858 9027 0.878086 GAGCTCGGGTGCAGATTAGC 60.878 60.000 0.00 0.00 34.99 3.09
5859 9028 1.889573 GCTCGGGTGCAGATTAGCC 60.890 63.158 0.00 0.00 0.00 3.93
5862 9031 3.272334 GGGTGCAGATTAGCCGCG 61.272 66.667 0.00 0.00 0.00 6.46
5863 9032 2.511600 GGTGCAGATTAGCCGCGT 60.512 61.111 4.92 0.00 0.00 6.01
5864 9033 2.526120 GGTGCAGATTAGCCGCGTC 61.526 63.158 4.92 0.00 0.00 5.19
5865 9034 2.202878 TGCAGATTAGCCGCGTCC 60.203 61.111 4.92 0.00 0.00 4.79
5923 9092 8.732746 TTAGCTAAAACATTCTAACCTGATCC 57.267 34.615 2.97 0.00 0.00 3.36
6031 9211 2.165030 GCAATGCAGCACCTCTTGTTAT 59.835 45.455 0.00 0.00 0.00 1.89
6911 10406 5.073311 ACGATCTTGATTTCTCGAAAGGA 57.927 39.130 0.00 0.00 35.24 3.36
7110 10616 3.222173 TGCCACACCTTATTCACACTT 57.778 42.857 0.00 0.00 0.00 3.16
7112 10618 3.568007 TGCCACACCTTATTCACACTTTC 59.432 43.478 0.00 0.00 0.00 2.62
7114 10621 4.320494 GCCACACCTTATTCACACTTTCTG 60.320 45.833 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.180276 TCAAGCTGACTAGGAAGGTCC 58.820 52.381 0.00 0.00 36.58 4.46
16 17 4.225984 CGCTAGAGTATGATCAAGCTGAC 58.774 47.826 11.85 1.34 0.00 3.51
56 57 0.097674 GTGTGATGATGTTGCGCCTC 59.902 55.000 4.18 0.00 0.00 4.70
79 80 1.412074 GCCCCTTGATGATCCCACAAT 60.412 52.381 0.00 0.00 0.00 2.71
80 81 0.033208 GCCCCTTGATGATCCCACAA 60.033 55.000 0.00 0.00 0.00 3.33
154 155 4.825546 CCTGCAAGATGGCACTTAATAG 57.174 45.455 0.00 0.00 39.25 1.73
210 211 1.217183 CTACCTCCACTACTGCCCCTA 59.783 57.143 0.00 0.00 0.00 3.53
211 212 0.032017 CTACCTCCACTACTGCCCCT 60.032 60.000 0.00 0.00 0.00 4.79
224 225 0.466922 TACGGCCCTGCTACTACCTC 60.467 60.000 0.00 0.00 0.00 3.85
228 229 3.513909 TCTATTACGGCCCTGCTACTA 57.486 47.619 0.00 0.00 0.00 1.82
229 230 2.376695 TCTATTACGGCCCTGCTACT 57.623 50.000 0.00 0.00 0.00 2.57
237 238 6.635030 ATCATTTTCCTTTCTATTACGGCC 57.365 37.500 0.00 0.00 0.00 6.13
246 247 6.183360 GGCTGATGCTAATCATTTTCCTTTCT 60.183 38.462 0.00 0.00 41.97 2.52
247 248 5.981915 GGCTGATGCTAATCATTTTCCTTTC 59.018 40.000 0.00 0.00 41.97 2.62
493 503 8.389779 ACACAAATGATGTTGCGGAATATATA 57.610 30.769 0.00 0.00 41.46 0.86
494 504 7.275888 ACACAAATGATGTTGCGGAATATAT 57.724 32.000 0.00 0.00 41.46 0.86
718 731 7.169645 GTGTTGCAGAATCTTTCTTTGCAATAA 59.830 33.333 15.47 0.00 44.88 1.40
746 762 1.464734 TTCCTCACCGTTGCAACAAA 58.535 45.000 28.01 9.75 0.00 2.83
756 772 1.363744 GCATGAGTCTTTCCTCACCG 58.636 55.000 0.00 0.00 43.86 4.94
811 829 3.120649 CGTCGGGTTTCAAAAGATCAGTC 60.121 47.826 0.00 0.00 0.00 3.51
838 856 2.219458 GCTTTTCTATTAGGGGGACGC 58.781 52.381 0.00 0.00 43.76 5.19
839 857 2.486727 GGGCTTTTCTATTAGGGGGACG 60.487 54.545 0.00 0.00 0.00 4.79
840 858 2.158505 GGGGCTTTTCTATTAGGGGGAC 60.159 54.545 0.00 0.00 0.00 4.46
841 859 2.141067 GGGGCTTTTCTATTAGGGGGA 58.859 52.381 0.00 0.00 0.00 4.81
842 860 2.144450 AGGGGCTTTTCTATTAGGGGG 58.856 52.381 0.00 0.00 0.00 5.40
843 861 3.566351 CAAGGGGCTTTTCTATTAGGGG 58.434 50.000 0.00 0.00 0.00 4.79
844 862 2.959030 GCAAGGGGCTTTTCTATTAGGG 59.041 50.000 0.00 0.00 40.25 3.53
864 882 1.257055 TTTGGCCCATTACCTGCAGC 61.257 55.000 8.66 0.00 0.00 5.25
883 901 6.616947 CGTCTTCTCTTGAGTCTTTGACTAT 58.383 40.000 0.00 0.00 43.53 2.12
891 909 2.625790 AGTTGCGTCTTCTCTTGAGTCT 59.374 45.455 0.00 0.00 0.00 3.24
975 2144 2.099405 TGTGTCTGTCTGTGAGTGTGA 58.901 47.619 0.00 0.00 0.00 3.58
981 2150 1.300156 GCGCTGTGTCTGTCTGTGA 60.300 57.895 0.00 0.00 0.00 3.58
982 2151 0.947660 ATGCGCTGTGTCTGTCTGTG 60.948 55.000 9.73 0.00 0.00 3.66
983 2152 0.947660 CATGCGCTGTGTCTGTCTGT 60.948 55.000 9.73 0.00 0.00 3.41
984 2153 1.632948 CCATGCGCTGTGTCTGTCTG 61.633 60.000 9.73 0.00 0.00 3.51
985 2154 1.375140 CCATGCGCTGTGTCTGTCT 60.375 57.895 9.73 0.00 0.00 3.41
986 2155 3.031964 GCCATGCGCTGTGTCTGTC 62.032 63.158 9.73 0.00 0.00 3.51
987 2156 3.052082 GCCATGCGCTGTGTCTGT 61.052 61.111 9.73 0.00 0.00 3.41
1049 2218 1.880819 GCGAGGACGAGGTGGGTTTA 61.881 60.000 0.00 0.00 42.66 2.01
1063 2232 2.217745 GGGGATAAGGGAGGCGAGG 61.218 68.421 0.00 0.00 0.00 4.63
1085 2254 2.200092 GGCCAAGGTGGTGGGAAA 59.800 61.111 0.00 0.00 40.46 3.13
1288 2457 4.876107 GGAGCGGATGTGAGATAAGAAAAA 59.124 41.667 0.00 0.00 0.00 1.94
1294 2463 2.483714 GCAAGGAGCGGATGTGAGATAA 60.484 50.000 0.00 0.00 0.00 1.75
1394 2563 1.626654 CGCCACTCTTTCGTCGCAAT 61.627 55.000 0.00 0.00 0.00 3.56
1412 2581 2.436646 AATCAGCAACGCTCCCCG 60.437 61.111 0.00 0.00 36.40 5.73
1430 2599 1.502163 GCTCGTGCATGCTACCCATC 61.502 60.000 20.33 0.00 39.41 3.51
1468 2637 3.383546 TGAAAGTGTAATTCGCGATGC 57.616 42.857 10.88 0.00 0.00 3.91
1469 2638 5.015733 GTCTTGAAAGTGTAATTCGCGATG 58.984 41.667 10.88 0.00 0.00 3.84
1470 2639 4.201589 CGTCTTGAAAGTGTAATTCGCGAT 60.202 41.667 10.88 0.00 0.00 4.58
1472 2641 3.120616 TCGTCTTGAAAGTGTAATTCGCG 59.879 43.478 0.00 0.00 0.00 5.87
1473 2642 4.640805 TCGTCTTGAAAGTGTAATTCGC 57.359 40.909 0.00 0.00 0.00 4.70
1595 2768 4.036352 CCTACGCTAACAGACTTCGAATC 58.964 47.826 0.00 0.00 0.00 2.52
1604 2777 7.636150 AATTAAGACTACCTACGCTAACAGA 57.364 36.000 0.00 0.00 0.00 3.41
1875 3088 5.964958 ACAGCAAACACAAGCACTTATAT 57.035 34.783 0.00 0.00 0.00 0.86
1876 3089 5.766150 AACAGCAAACACAAGCACTTATA 57.234 34.783 0.00 0.00 0.00 0.98
1877 3090 4.654091 AACAGCAAACACAAGCACTTAT 57.346 36.364 0.00 0.00 0.00 1.73
1878 3091 4.082517 TCAAACAGCAAACACAAGCACTTA 60.083 37.500 0.00 0.00 0.00 2.24
1962 3187 9.733556 TCTCCATGTAAGTTAAAGCAAGAAATA 57.266 29.630 0.00 0.00 0.00 1.40
2054 3279 3.938963 ACCGATTGACGAGCATACAATTT 59.061 39.130 0.00 0.00 45.77 1.82
2170 3404 8.388103 CCAGAAGTTACTTCCATATTTAACACG 58.612 37.037 20.05 0.00 40.98 4.49
2266 3500 2.097466 GCAGCGCCATAACAACTTATGT 59.903 45.455 2.29 0.00 46.82 2.29
2267 3501 2.355756 AGCAGCGCCATAACAACTTATG 59.644 45.455 2.29 0.00 39.30 1.90
2268 3502 2.643551 AGCAGCGCCATAACAACTTAT 58.356 42.857 2.29 0.00 0.00 1.73
2269 3503 2.107950 AGCAGCGCCATAACAACTTA 57.892 45.000 2.29 0.00 0.00 2.24
2270 3504 2.009774 CTAGCAGCGCCATAACAACTT 58.990 47.619 2.29 0.00 0.00 2.66
2271 3505 1.207089 TCTAGCAGCGCCATAACAACT 59.793 47.619 2.29 0.00 0.00 3.16
2336 3571 1.286257 GAAATCCCTTCCCTCTTGCCT 59.714 52.381 0.00 0.00 0.00 4.75
2442 3677 2.044555 GGGTCGTTTGCTTAGGGGC 61.045 63.158 0.00 0.00 0.00 5.80
2454 3689 6.141790 AGGGTTAATTAGAGATAAGGGTCGT 58.858 40.000 0.00 0.00 0.00 4.34
2514 3749 1.700739 CCAGGTGGGGTGTAGTGTTAA 59.299 52.381 0.00 0.00 0.00 2.01
2588 3823 1.673920 AGGTGTTAGGTTTGTGTTGCG 59.326 47.619 0.00 0.00 0.00 4.85
2645 3880 6.127703 CGTCCTAGTCTATTTCAGGTTGAGAA 60.128 42.308 0.00 0.00 0.00 2.87
2664 3899 3.680937 CACGTCCAAAATAAAGCGTCCTA 59.319 43.478 0.00 0.00 0.00 2.94
2665 3900 2.482721 CACGTCCAAAATAAAGCGTCCT 59.517 45.455 0.00 0.00 0.00 3.85
2666 3901 2.846693 CACGTCCAAAATAAAGCGTCC 58.153 47.619 0.00 0.00 0.00 4.79
2690 3925 0.107654 GGATCCAGGTGGCTGTACAC 60.108 60.000 6.95 0.00 40.60 2.90
2851 4086 4.896829 TGTTTTCCCCGCGGGCAA 62.897 61.111 39.46 30.27 43.94 4.52
2896 4131 2.000701 TCGGGGATCTTGGGCATGT 61.001 57.895 0.00 0.00 0.00 3.21
3075 4310 3.611674 TCGCCGTCACTGCTTCCA 61.612 61.111 0.00 0.00 0.00 3.53
3082 4317 4.039357 CCTGTCGTCGCCGTCACT 62.039 66.667 0.00 0.00 35.01 3.41
3095 4330 0.617413 CCAGCAGATCAAGTCCCTGT 59.383 55.000 0.00 0.00 0.00 4.00
3097 4332 1.489649 CATCCAGCAGATCAAGTCCCT 59.510 52.381 0.00 0.00 30.59 4.20
3173 4408 3.914984 CAGTATGGGATGCCCTACG 57.085 57.895 11.98 5.05 45.70 3.51
3291 4526 3.922640 CTCCTAGCAGCCTCCGCC 61.923 72.222 0.00 0.00 34.57 6.13
3292 4527 4.600576 GCTCCTAGCAGCCTCCGC 62.601 72.222 0.00 0.00 41.89 5.54
3293 4528 4.277593 CGCTCCTAGCAGCCTCCG 62.278 72.222 0.00 0.00 42.58 4.63
3294 4529 3.922640 CCGCTCCTAGCAGCCTCC 61.923 72.222 0.00 0.00 42.58 4.30
3295 4530 4.600576 GCCGCTCCTAGCAGCCTC 62.601 72.222 0.00 0.00 42.58 4.70
3317 4552 4.982701 AACCCTGGCTGCAGTGGC 62.983 66.667 16.64 3.78 41.68 5.01
3318 4553 2.987547 CAACCCTGGCTGCAGTGG 60.988 66.667 16.64 14.61 0.00 4.00
3319 4554 2.987547 CCAACCCTGGCTGCAGTG 60.988 66.667 16.64 3.27 35.39 3.66
3320 4555 4.290622 CCCAACCCTGGCTGCAGT 62.291 66.667 16.64 0.00 41.99 4.40
3337 4572 4.856801 ATCCATCGCCACCACCGC 62.857 66.667 0.00 0.00 0.00 5.68
3338 4573 2.896854 CATCCATCGCCACCACCG 60.897 66.667 0.00 0.00 0.00 4.94
3339 4574 2.516930 CCATCCATCGCCACCACC 60.517 66.667 0.00 0.00 0.00 4.61
3340 4575 3.211963 GCCATCCATCGCCACCAC 61.212 66.667 0.00 0.00 0.00 4.16
3341 4576 3.702529 CTGCCATCCATCGCCACCA 62.703 63.158 0.00 0.00 0.00 4.17
3342 4577 2.903855 CTGCCATCCATCGCCACC 60.904 66.667 0.00 0.00 0.00 4.61
3343 4578 3.589881 GCTGCCATCCATCGCCAC 61.590 66.667 0.00 0.00 0.00 5.01
3344 4579 3.800833 AGCTGCCATCCATCGCCA 61.801 61.111 0.00 0.00 0.00 5.69
3345 4580 3.285215 CAGCTGCCATCCATCGCC 61.285 66.667 0.00 0.00 0.00 5.54
3346 4581 3.962421 GCAGCTGCCATCCATCGC 61.962 66.667 28.76 0.00 34.31 4.58
3347 4582 2.515290 TGCAGCTGCCATCCATCG 60.515 61.111 34.64 0.00 41.18 3.84
3348 4583 2.846652 GCTGCAGCTGCCATCCATC 61.847 63.158 34.64 8.67 41.18 3.51
3349 4584 2.833582 GCTGCAGCTGCCATCCAT 60.834 61.111 34.64 0.00 41.18 3.41
3398 6331 2.521708 AACCCTGGTTGCAGTGGC 60.522 61.111 0.00 0.00 36.91 5.01
3399 6332 3.447040 CAACCCTGGTTGCAGTGG 58.553 61.111 15.59 0.00 46.92 4.00
3406 6339 4.596585 CACCGCCCAACCCTGGTT 62.597 66.667 0.00 0.00 41.72 3.67
3418 6351 4.856801 ATCCATCGCCACCACCGC 62.857 66.667 0.00 0.00 0.00 5.68
3419 6352 2.896854 CATCCATCGCCACCACCG 60.897 66.667 0.00 0.00 0.00 4.94
3420 6353 1.819632 GTCATCCATCGCCACCACC 60.820 63.158 0.00 0.00 0.00 4.61
3421 6354 1.078497 TGTCATCCATCGCCACCAC 60.078 57.895 0.00 0.00 0.00 4.16
3422 6355 1.221566 CTGTCATCCATCGCCACCA 59.778 57.895 0.00 0.00 0.00 4.17
3423 6356 2.182842 GCTGTCATCCATCGCCACC 61.183 63.158 0.00 0.00 0.00 4.61
3424 6357 1.153289 AGCTGTCATCCATCGCCAC 60.153 57.895 0.00 0.00 0.00 5.01
3425 6358 1.153309 CAGCTGTCATCCATCGCCA 60.153 57.895 5.25 0.00 0.00 5.69
3426 6359 2.541120 GCAGCTGTCATCCATCGCC 61.541 63.158 16.64 0.00 0.00 5.54
3427 6360 1.773054 CTGCAGCTGTCATCCATCGC 61.773 60.000 16.64 0.00 0.00 4.58
3428 6361 1.773054 GCTGCAGCTGTCATCCATCG 61.773 60.000 31.33 2.51 38.21 3.84
3429 6362 1.773054 CGCTGCAGCTGTCATCCATC 61.773 60.000 34.22 3.31 39.32 3.51
3430 6363 1.818363 CGCTGCAGCTGTCATCCAT 60.818 57.895 34.22 0.00 39.32 3.41
3431 6364 2.435410 CGCTGCAGCTGTCATCCA 60.435 61.111 34.22 3.02 39.32 3.41
3432 6365 3.200593 CCGCTGCAGCTGTCATCC 61.201 66.667 34.22 5.37 39.32 3.51
3433 6366 3.873883 GCCGCTGCAGCTGTCATC 61.874 66.667 34.22 12.88 39.32 2.92
3690 6710 2.047179 GTCACCTTGTCGCCTCCC 60.047 66.667 0.00 0.00 0.00 4.30
3944 6967 2.044555 GGGTCGTTTGCTTAGGGGC 61.045 63.158 0.00 0.00 0.00 5.80
4050 7076 7.350382 TCTCAAGTCTTCTGAGTCCTATGTAT 58.650 38.462 2.23 0.00 0.00 2.29
4084 7110 7.707624 AATATGTTCCAGAATTTCTTCAGCA 57.292 32.000 0.00 0.00 33.56 4.41
4332 7377 8.901793 AGGCACTTGTAATAACTAGTAGAGTAC 58.098 37.037 3.59 2.16 39.27 2.73
4397 7548 9.838339 CCTTGAATAACTAATGACTAGGAACAT 57.162 33.333 0.00 0.00 31.14 2.71
4406 7557 6.017852 GCCTGCTACCTTGAATAACTAATGAC 60.018 42.308 0.00 0.00 0.00 3.06
4437 7593 2.095059 CCAGGTCATTTGAAAGAAGGCG 60.095 50.000 0.00 0.00 0.00 5.52
4553 7717 4.867047 CCAATATACTTGAGCGAGGCATAG 59.133 45.833 0.00 0.00 0.00 2.23
4583 7747 3.985008 CATGTTTGTCCATGCCATATGG 58.015 45.455 18.07 18.07 36.15 2.74
4882 8046 7.775561 AGAATCCACCCTTGAATCTACATTTAC 59.224 37.037 0.00 0.00 0.00 2.01
4948 8112 8.647796 AGATGCACATCCATGATTAATTTGAAT 58.352 29.630 7.01 0.00 38.58 2.57
5210 8377 5.508200 TTTGTTGTACATGAAAGGGTGTC 57.492 39.130 0.00 0.00 0.00 3.67
5359 8526 6.431198 TTTCGAAGTAATATTGGCACTTCC 57.569 37.500 17.87 6.53 43.33 3.46
5478 8647 2.793790 GTGCATATGAGCTCTTCACGAG 59.206 50.000 16.19 0.00 38.99 4.18
5479 8648 2.481969 GGTGCATATGAGCTCTTCACGA 60.482 50.000 16.19 0.00 38.99 4.35
5480 8649 1.863454 GGTGCATATGAGCTCTTCACG 59.137 52.381 16.19 2.19 38.99 4.35
5481 8650 2.216898 GGGTGCATATGAGCTCTTCAC 58.783 52.381 16.19 12.41 38.99 3.18
5482 8651 1.202568 CGGGTGCATATGAGCTCTTCA 60.203 52.381 16.19 0.23 40.85 3.02
5483 8652 1.506493 CGGGTGCATATGAGCTCTTC 58.494 55.000 16.19 0.00 34.99 2.87
5484 8653 0.533755 GCGGGTGCATATGAGCTCTT 60.534 55.000 16.19 11.54 42.15 2.85
5485 8654 1.070445 GCGGGTGCATATGAGCTCT 59.930 57.895 16.19 3.04 42.15 4.09
5486 8655 3.647824 GCGGGTGCATATGAGCTC 58.352 61.111 6.82 6.82 42.15 4.09
5496 8665 0.878416 TTTACTGTTCATGCGGGTGC 59.122 50.000 0.00 0.00 43.20 5.01
5497 8666 3.500982 CATTTTACTGTTCATGCGGGTG 58.499 45.455 0.00 0.00 0.00 4.61
5498 8667 2.491693 CCATTTTACTGTTCATGCGGGT 59.508 45.455 0.00 0.00 0.00 5.28
5499 8668 2.752354 TCCATTTTACTGTTCATGCGGG 59.248 45.455 0.00 0.00 0.00 6.13
5500 8669 4.433186 TTCCATTTTACTGTTCATGCGG 57.567 40.909 0.00 0.00 0.00 5.69
5501 8670 6.761731 TTTTTCCATTTTACTGTTCATGCG 57.238 33.333 0.00 0.00 0.00 4.73
5556 8725 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
5557 8726 9.139174 GAACTTTTGTCAATGTTTCTCTCAAAA 57.861 29.630 6.10 0.00 31.96 2.44
5558 8727 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
5559 8728 8.055279 AGAACTTTTGTCAATGTTTCTCTCAA 57.945 30.769 6.10 0.00 31.96 3.02
5560 8729 7.630242 AGAACTTTTGTCAATGTTTCTCTCA 57.370 32.000 6.10 0.00 31.96 3.27
5561 8730 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
5562 8731 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
5563 8732 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
5564 8733 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
5565 8734 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
5566 8735 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
5567 8736 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
5568 8737 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
5569 8738 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
5570 8739 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
5571 8740 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
5572 8741 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
5573 8742 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
5574 8743 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
5575 8744 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
5576 8745 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
5577 8746 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
5578 8747 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
5579 8748 5.068987 TGAATTTTTGCAGGCACTTAGAACT 59.931 36.000 0.00 0.00 34.60 3.01
5580 8749 5.288804 TGAATTTTTGCAGGCACTTAGAAC 58.711 37.500 0.00 0.00 34.60 3.01
5581 8750 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
5582 8751 5.243507 TGATGAATTTTTGCAGGCACTTAGA 59.756 36.000 0.00 0.00 34.60 2.10
5583 8752 5.472148 TGATGAATTTTTGCAGGCACTTAG 58.528 37.500 0.00 0.00 34.60 2.18
5584 8753 5.465532 TGATGAATTTTTGCAGGCACTTA 57.534 34.783 0.00 0.00 34.60 2.24
5585 8754 4.339872 TGATGAATTTTTGCAGGCACTT 57.660 36.364 0.00 0.00 34.60 3.16
5586 8755 4.020928 TCATGATGAATTTTTGCAGGCACT 60.021 37.500 0.00 0.00 43.88 4.40
5587 8756 4.247258 TCATGATGAATTTTTGCAGGCAC 58.753 39.130 0.00 0.00 0.00 5.01
5588 8757 4.538746 TCATGATGAATTTTTGCAGGCA 57.461 36.364 0.00 0.00 0.00 4.75
5589 8758 5.866335 TTTCATGATGAATTTTTGCAGGC 57.134 34.783 8.90 0.00 36.11 4.85
5590 8759 7.118535 TGTGATTTCATGATGAATTTTTGCAGG 59.881 33.333 8.90 0.00 36.11 4.85
5591 8760 8.024146 TGTGATTTCATGATGAATTTTTGCAG 57.976 30.769 8.90 0.00 36.11 4.41
5592 8761 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
5593 8762 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
5594 8763 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
5595 8764 9.953565 AGGAATGTGATTTCATGATGAATTTTT 57.046 25.926 8.90 0.00 36.11 1.94
5596 8765 9.378551 CAGGAATGTGATTTCATGATGAATTTT 57.621 29.630 8.90 0.00 39.18 1.82
5597 8766 8.537016 ACAGGAATGTGATTTCATGATGAATTT 58.463 29.630 8.90 0.00 39.18 1.82
5598 8767 8.074613 ACAGGAATGTGATTTCATGATGAATT 57.925 30.769 8.90 5.47 39.18 2.17
5599 8768 7.655521 ACAGGAATGTGATTTCATGATGAAT 57.344 32.000 8.90 0.00 39.18 2.57
5600 8769 8.578448 TTACAGGAATGTGATTTCATGATGAA 57.422 30.769 3.29 3.29 39.18 2.57
5601 8770 7.283807 CCTTACAGGAATGTGATTTCATGATGA 59.716 37.037 0.00 0.00 39.18 2.92
5602 8771 7.423199 CCTTACAGGAATGTGATTTCATGATG 58.577 38.462 0.00 0.00 39.18 3.07
5603 8772 6.040166 GCCTTACAGGAATGTGATTTCATGAT 59.960 38.462 0.00 0.00 39.18 2.45
5604 8773 5.357878 GCCTTACAGGAATGTGATTTCATGA 59.642 40.000 5.92 0.00 39.18 3.07
5605 8774 5.585390 GCCTTACAGGAATGTGATTTCATG 58.415 41.667 0.00 0.00 41.77 3.07
5606 8775 4.336433 CGCCTTACAGGAATGTGATTTCAT 59.664 41.667 0.00 0.00 37.67 2.57
5607 8776 3.689161 CGCCTTACAGGAATGTGATTTCA 59.311 43.478 0.00 0.00 37.67 2.69
5608 8777 3.689649 ACGCCTTACAGGAATGTGATTTC 59.310 43.478 0.00 0.00 37.67 2.17
5609 8778 3.440173 CACGCCTTACAGGAATGTGATTT 59.560 43.478 0.00 0.00 37.67 2.17
5610 8779 3.009723 CACGCCTTACAGGAATGTGATT 58.990 45.455 0.00 0.00 37.67 2.57
5611 8780 2.632377 CACGCCTTACAGGAATGTGAT 58.368 47.619 0.00 0.00 37.67 3.06
5612 8781 1.338674 CCACGCCTTACAGGAATGTGA 60.339 52.381 10.25 0.00 37.67 3.58
5613 8782 1.086696 CCACGCCTTACAGGAATGTG 58.913 55.000 0.00 0.00 37.67 3.21
5614 8783 0.676782 GCCACGCCTTACAGGAATGT 60.677 55.000 0.00 0.00 37.67 2.71
5615 8784 0.676466 TGCCACGCCTTACAGGAATG 60.676 55.000 0.00 0.00 37.67 2.67
5616 8785 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.00 37.67 3.01
5617 8786 0.179015 TTTGCCACGCCTTACAGGAA 60.179 50.000 0.00 0.00 37.67 3.36
5618 8787 0.179015 TTTTGCCACGCCTTACAGGA 60.179 50.000 0.00 0.00 37.67 3.86
5619 8788 0.671251 TTTTTGCCACGCCTTACAGG 59.329 50.000 0.00 0.00 38.80 4.00
5637 8806 7.485595 GCATTTTGAAGCACTGAATTTGTTTTT 59.514 29.630 0.00 0.00 0.00 1.94
5638 8807 6.968335 GCATTTTGAAGCACTGAATTTGTTTT 59.032 30.769 0.00 0.00 0.00 2.43
5639 8808 6.488817 GCATTTTGAAGCACTGAATTTGTTT 58.511 32.000 0.00 0.00 0.00 2.83
5640 8809 5.276963 CGCATTTTGAAGCACTGAATTTGTT 60.277 36.000 0.00 0.00 0.00 2.83
5641 8810 4.209703 CGCATTTTGAAGCACTGAATTTGT 59.790 37.500 0.00 0.00 0.00 2.83
5642 8811 4.209703 ACGCATTTTGAAGCACTGAATTTG 59.790 37.500 0.00 0.00 0.00 2.32
5643 8812 4.370917 ACGCATTTTGAAGCACTGAATTT 58.629 34.783 0.00 0.00 0.00 1.82
5644 8813 3.981211 ACGCATTTTGAAGCACTGAATT 58.019 36.364 0.00 0.00 0.00 2.17
5645 8814 3.648339 ACGCATTTTGAAGCACTGAAT 57.352 38.095 0.00 0.00 0.00 2.57
5646 8815 3.435105 AACGCATTTTGAAGCACTGAA 57.565 38.095 0.00 0.00 0.00 3.02
5647 8816 3.114809 CAAACGCATTTTGAAGCACTGA 58.885 40.909 2.24 0.00 46.76 3.41
5648 8817 3.492725 CAAACGCATTTTGAAGCACTG 57.507 42.857 2.24 0.00 46.76 3.66
5656 8825 8.873242 AAAAAGTTACTTTCAAACGCATTTTG 57.127 26.923 10.98 2.03 45.38 2.44
5657 8826 8.713271 TGAAAAAGTTACTTTCAAACGCATTTT 58.287 25.926 10.98 0.00 39.28 1.82
5658 8827 8.245701 TGAAAAAGTTACTTTCAAACGCATTT 57.754 26.923 10.98 0.00 39.28 2.32
5659 8828 7.757624 TCTGAAAAAGTTACTTTCAAACGCATT 59.242 29.630 10.98 0.00 41.10 3.56
5660 8829 7.254852 TCTGAAAAAGTTACTTTCAAACGCAT 58.745 30.769 10.98 0.00 41.10 4.73
5661 8830 6.613233 TCTGAAAAAGTTACTTTCAAACGCA 58.387 32.000 10.98 3.26 41.10 5.24
5662 8831 6.745907 ACTCTGAAAAAGTTACTTTCAAACGC 59.254 34.615 10.98 0.00 41.10 4.84
5663 8832 9.207042 GTACTCTGAAAAAGTTACTTTCAAACG 57.793 33.333 10.98 1.97 41.10 3.60
5701 8870 1.202830 TCCTAGAAGGCGTGGCAAAAA 60.203 47.619 0.00 0.00 34.61 1.94
5702 8871 0.398696 TCCTAGAAGGCGTGGCAAAA 59.601 50.000 0.00 0.00 34.61 2.44
5703 8872 0.398696 TTCCTAGAAGGCGTGGCAAA 59.601 50.000 0.00 0.00 34.61 3.68
5704 8873 0.618458 ATTCCTAGAAGGCGTGGCAA 59.382 50.000 0.00 0.00 34.61 4.52
5705 8874 0.107703 CATTCCTAGAAGGCGTGGCA 60.108 55.000 0.00 0.00 34.61 4.92
5706 8875 0.107654 ACATTCCTAGAAGGCGTGGC 60.108 55.000 0.00 0.00 34.61 5.01
5707 8876 1.207089 TCACATTCCTAGAAGGCGTGG 59.793 52.381 0.00 0.00 34.61 4.94
5708 8877 2.672961 TCACATTCCTAGAAGGCGTG 57.327 50.000 0.00 0.00 34.61 5.34
5709 8878 3.914426 AATCACATTCCTAGAAGGCGT 57.086 42.857 0.00 0.00 34.61 5.68
5710 8879 4.034510 GTGAAATCACATTCCTAGAAGGCG 59.965 45.833 8.63 0.00 45.75 5.52
5711 8880 4.034510 CGTGAAATCACATTCCTAGAAGGC 59.965 45.833 13.51 0.00 46.75 4.35
5712 8881 5.419542 TCGTGAAATCACATTCCTAGAAGG 58.580 41.667 13.51 0.00 46.75 3.46
5713 8882 6.758416 TCATCGTGAAATCACATTCCTAGAAG 59.242 38.462 13.51 0.00 46.75 2.85
5714 8883 6.639563 TCATCGTGAAATCACATTCCTAGAA 58.360 36.000 13.51 0.00 46.75 2.10
5715 8884 6.220726 TCATCGTGAAATCACATTCCTAGA 57.779 37.500 13.51 1.70 46.75 2.43
5716 8885 6.908870 TTCATCGTGAAATCACATTCCTAG 57.091 37.500 13.51 0.00 46.75 3.02
5717 8886 7.864108 AATTCATCGTGAAATCACATTCCTA 57.136 32.000 13.51 0.00 46.75 2.94
5718 8887 6.764308 AATTCATCGTGAAATCACATTCCT 57.236 33.333 13.51 0.00 46.75 3.36
5719 8888 7.816945 AAAATTCATCGTGAAATCACATTCC 57.183 32.000 13.51 0.00 46.75 3.01
5720 8889 7.685304 GCAAAAATTCATCGTGAAATCACATTC 59.315 33.333 13.51 0.00 46.75 2.67
5721 8890 7.171167 TGCAAAAATTCATCGTGAAATCACATT 59.829 29.630 13.51 2.95 46.75 2.71
5722 8891 6.645827 TGCAAAAATTCATCGTGAAATCACAT 59.354 30.769 13.51 4.06 46.75 3.21
5723 8892 5.981915 TGCAAAAATTCATCGTGAAATCACA 59.018 32.000 13.51 1.99 46.75 3.58
5724 8893 6.400303 CCTGCAAAAATTCATCGTGAAATCAC 60.400 38.462 3.43 3.43 40.12 3.06
5725 8894 5.634439 CCTGCAAAAATTCATCGTGAAATCA 59.366 36.000 4.87 0.00 40.12 2.57
5726 8895 5.445010 GCCTGCAAAAATTCATCGTGAAATC 60.445 40.000 4.87 0.00 40.12 2.17
5727 8896 4.389687 GCCTGCAAAAATTCATCGTGAAAT 59.610 37.500 4.87 0.00 40.12 2.17
5728 8897 3.740321 GCCTGCAAAAATTCATCGTGAAA 59.260 39.130 4.87 0.00 40.12 2.69
5729 8898 3.243670 TGCCTGCAAAAATTCATCGTGAA 60.244 39.130 3.49 3.49 41.09 3.18
5730 8899 2.295629 TGCCTGCAAAAATTCATCGTGA 59.704 40.909 0.00 0.00 0.00 4.35
5731 8900 2.409378 GTGCCTGCAAAAATTCATCGTG 59.591 45.455 0.00 0.00 0.00 4.35
5732 8901 2.297033 AGTGCCTGCAAAAATTCATCGT 59.703 40.909 0.00 0.00 0.00 3.73
5733 8902 2.950433 AGTGCCTGCAAAAATTCATCG 58.050 42.857 0.00 0.00 0.00 3.84
5734 8903 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
5735 8904 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
5736 8905 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
5737 8906 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
5738 8907 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
5739 8908 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
5740 8909 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
5741 8910 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
5742 8911 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
5743 8912 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
5744 8913 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
5745 8914 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
5746 8915 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
5747 8916 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
5748 8917 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
5749 8918 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
5750 8919 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
5751 8920 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
5752 8921 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
5753 8922 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
5754 8923 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
5755 8924 7.630242 TGAGAGAAACATTGACAAAAGTTCT 57.370 32.000 9.09 9.17 0.00 3.01
5756 8925 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
5757 8926 9.487790 TTTTTGAGAGAAACATTGACAAAAGTT 57.512 25.926 0.00 0.00 37.18 2.66
5807 8976 5.694006 CCCGCATGAACAGTAAAATCAAAAA 59.306 36.000 0.00 0.00 0.00 1.94
5808 8977 5.010112 TCCCGCATGAACAGTAAAATCAAAA 59.990 36.000 0.00 0.00 0.00 2.44
5809 8978 4.520874 TCCCGCATGAACAGTAAAATCAAA 59.479 37.500 0.00 0.00 0.00 2.69
5810 8979 4.075682 TCCCGCATGAACAGTAAAATCAA 58.924 39.130 0.00 0.00 0.00 2.57
5811 8980 3.680490 TCCCGCATGAACAGTAAAATCA 58.320 40.909 0.00 0.00 0.00 2.57
5812 8981 3.487544 GCTCCCGCATGAACAGTAAAATC 60.488 47.826 0.00 0.00 35.78 2.17
5813 8982 2.423538 GCTCCCGCATGAACAGTAAAAT 59.576 45.455 0.00 0.00 35.78 1.82
5814 8983 1.810151 GCTCCCGCATGAACAGTAAAA 59.190 47.619 0.00 0.00 35.78 1.52
5815 8984 1.271108 TGCTCCCGCATGAACAGTAAA 60.271 47.619 0.00 0.00 42.25 2.01
5816 8985 0.323302 TGCTCCCGCATGAACAGTAA 59.677 50.000 0.00 0.00 42.25 2.24
5817 8986 1.979262 TGCTCCCGCATGAACAGTA 59.021 52.632 0.00 0.00 42.25 2.74
5818 8987 2.749682 TGCTCCCGCATGAACAGT 59.250 55.556 0.00 0.00 42.25 3.55
5833 9002 1.226686 CTGCACCCGAGCTCATATGC 61.227 60.000 20.59 20.59 34.99 3.14
5834 9003 0.390492 TCTGCACCCGAGCTCATATG 59.610 55.000 15.40 9.02 34.99 1.78
5835 9004 1.346062 ATCTGCACCCGAGCTCATAT 58.654 50.000 15.40 0.00 34.99 1.78
5836 9005 1.123077 AATCTGCACCCGAGCTCATA 58.877 50.000 15.40 0.00 34.99 2.15
5837 9006 1.069823 CTAATCTGCACCCGAGCTCAT 59.930 52.381 15.40 0.00 34.99 2.90
5838 9007 0.461548 CTAATCTGCACCCGAGCTCA 59.538 55.000 15.40 0.00 34.99 4.26
5839 9008 0.878086 GCTAATCTGCACCCGAGCTC 60.878 60.000 2.73 2.73 34.99 4.09
5840 9009 1.144936 GCTAATCTGCACCCGAGCT 59.855 57.895 0.00 0.00 34.99 4.09
5841 9010 1.889573 GGCTAATCTGCACCCGAGC 60.890 63.158 0.00 0.00 34.04 5.03
5842 9011 1.592669 CGGCTAATCTGCACCCGAG 60.593 63.158 0.00 0.00 41.34 4.63
5843 9012 2.499205 CGGCTAATCTGCACCCGA 59.501 61.111 0.00 0.00 41.34 5.14
5844 9013 3.272334 GCGGCTAATCTGCACCCG 61.272 66.667 0.00 0.00 46.35 5.28
5849 9018 3.330853 CGGACGCGGCTAATCTGC 61.331 66.667 13.91 0.00 43.66 4.26
5850 9019 0.597637 AATCGGACGCGGCTAATCTG 60.598 55.000 13.91 3.65 0.00 2.90
5851 9020 0.597637 CAATCGGACGCGGCTAATCT 60.598 55.000 13.91 0.00 0.00 2.40
5852 9021 0.596600 TCAATCGGACGCGGCTAATC 60.597 55.000 13.91 0.00 0.00 1.75
5853 9022 0.179094 TTCAATCGGACGCGGCTAAT 60.179 50.000 13.91 2.12 0.00 1.73
5854 9023 0.179094 ATTCAATCGGACGCGGCTAA 60.179 50.000 13.91 0.00 0.00 3.09
5855 9024 0.874175 CATTCAATCGGACGCGGCTA 60.874 55.000 13.91 0.00 0.00 3.93
5856 9025 2.173669 CATTCAATCGGACGCGGCT 61.174 57.895 13.91 0.00 0.00 5.52
5857 9026 2.324477 CATTCAATCGGACGCGGC 59.676 61.111 12.47 7.53 0.00 6.53
5858 9027 2.324477 GCATTCAATCGGACGCGG 59.676 61.111 12.47 0.00 0.00 6.46
5859 9028 2.324477 GGCATTCAATCGGACGCG 59.676 61.111 3.53 3.53 0.00 6.01
5860 9029 1.376609 AAGGGCATTCAATCGGACGC 61.377 55.000 0.00 0.00 0.00 5.19
5861 9030 1.064060 GAAAGGGCATTCAATCGGACG 59.936 52.381 0.00 0.00 0.00 4.79
5862 9031 2.369394 AGAAAGGGCATTCAATCGGAC 58.631 47.619 5.27 0.00 0.00 4.79
5863 9032 2.806945 AGAAAGGGCATTCAATCGGA 57.193 45.000 5.27 0.00 0.00 4.55
5864 9033 3.193267 TGAAAGAAAGGGCATTCAATCGG 59.807 43.478 5.27 0.00 0.00 4.18
5865 9034 4.439305 TGAAAGAAAGGGCATTCAATCG 57.561 40.909 5.27 0.00 0.00 3.34
5923 9092 5.705441 ACAATGGTAAGTACTGTCCACAATG 59.295 40.000 17.77 17.56 32.60 2.82
6228 9410 0.550147 TAGCTGAAAAGAGGGCCCCT 60.550 55.000 21.43 13.15 36.03 4.79
6831 10326 3.546616 GGGGAACACACGAAAACGTAAAG 60.547 47.826 0.00 0.00 0.00 1.85
6837 10332 1.670791 TCTGGGGAACACACGAAAAC 58.329 50.000 0.00 0.00 0.00 2.43
6911 10406 5.278660 GCCTGTGTCAACATCAAGAAATCTT 60.279 40.000 0.00 0.00 35.22 2.40
7110 10616 7.164230 ACAAAAAGGTCATTTACACACAGAA 57.836 32.000 0.00 0.00 0.00 3.02
7112 10618 6.255453 CCAACAAAAAGGTCATTTACACACAG 59.745 38.462 0.00 0.00 0.00 3.66
7114 10621 5.522097 CCCAACAAAAAGGTCATTTACACAC 59.478 40.000 0.00 0.00 0.00 3.82
7279 10815 4.067896 AGATTGGCTGTTACTCACACAAG 58.932 43.478 0.00 0.00 0.00 3.16
7981 14135 3.251004 GGCCTATTTTAATCGAGGTGCAG 59.749 47.826 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.