Multiple sequence alignment - TraesCS5B01G120400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G120400 chr5B 100.000 8018 0 0 1 8018 213259536 213251519 0.000000e+00 14807.0
1 TraesCS5B01G120400 chr5B 89.130 92 10 0 4242 4333 262051043 262050952 1.830000e-21 115.0
2 TraesCS5B01G120400 chr5B 93.421 76 4 1 6294 6368 574252222 574252297 2.370000e-20 111.0
3 TraesCS5B01G120400 chr5A 94.179 4329 147 42 3748 8018 227929101 227924820 0.000000e+00 6501.0
4 TraesCS5B01G120400 chr5A 95.741 1996 70 11 787 2771 227931846 227929855 0.000000e+00 3201.0
5 TraesCS5B01G120400 chr5A 90.377 478 20 4 2711 3164 227929857 227929382 8.900000e-169 604.0
6 TraesCS5B01G120400 chr5A 97.845 232 5 0 3293 3524 227929385 227929154 1.250000e-107 401.0
7 TraesCS5B01G120400 chr5A 92.405 79 5 1 6292 6369 636310006 636310084 2.370000e-20 111.0
8 TraesCS5B01G120400 chr5D 92.567 3417 100 57 4626 7963 197147954 197151295 0.000000e+00 4761.0
9 TraesCS5B01G120400 chr5D 94.896 1724 71 10 787 2507 197143885 197145594 0.000000e+00 2680.0
10 TraesCS5B01G120400 chr5D 90.920 870 48 6 3293 4157 197146207 197147050 0.000000e+00 1140.0
11 TraesCS5B01G120400 chr5D 91.574 629 41 5 2539 3164 197145591 197146210 0.000000e+00 857.0
12 TraesCS5B01G120400 chr5D 94.521 438 20 3 4193 4628 197147049 197147484 0.000000e+00 673.0
13 TraesCS5B01G120400 chr5D 79.011 748 99 24 77 790 197143112 197143835 7.330000e-125 459.0
14 TraesCS5B01G120400 chr5D 100.000 33 0 0 3 35 197143039 197143071 2.420000e-05 62.1
15 TraesCS5B01G120400 chr7D 76.476 1016 191 40 5251 6229 393100219 393101223 7.180000e-140 508.0
16 TraesCS5B01G120400 chr7D 92.135 89 7 0 4241 4329 103820621 103820533 8.450000e-25 126.0
17 TraesCS5B01G120400 chr7D 86.598 97 7 5 6299 6390 411509651 411509746 1.420000e-17 102.0
18 TraesCS5B01G120400 chr7A 75.514 1021 196 41 5251 6229 445480478 445481486 1.230000e-122 451.0
19 TraesCS5B01G120400 chr7A 79.104 201 31 11 566 761 729637182 729636988 2.350000e-25 128.0
20 TraesCS5B01G120400 chr1B 74.020 1020 204 45 5251 6229 375360730 375359731 7.650000e-95 359.0
21 TraesCS5B01G120400 chr1B 91.111 135 12 0 3161 3295 57689481 57689347 4.940000e-42 183.0
22 TraesCS5B01G120400 chr1B 92.553 94 6 1 4234 4326 277425274 277425367 5.050000e-27 134.0
23 TraesCS5B01G120400 chr1B 90.698 86 6 2 6285 6369 438648163 438648079 6.580000e-21 113.0
24 TraesCS5B01G120400 chr6D 76.840 652 115 28 5242 5870 403058716 403059354 1.290000e-87 335.0
25 TraesCS5B01G120400 chr6D 75.874 286 52 12 477 761 468607024 468607293 6.530000e-26 130.0
26 TraesCS5B01G120400 chr6D 94.231 52 3 0 484 535 8255251 8255200 6.670000e-11 80.5
27 TraesCS5B01G120400 chr6D 97.727 44 1 0 2679 2722 221214255 221214298 8.630000e-10 76.8
28 TraesCS5B01G120400 chr7B 82.524 309 50 2 5264 5569 392801988 392802295 1.330000e-67 268.0
29 TraesCS5B01G120400 chr7B 78.125 224 40 9 542 761 739560225 739560007 5.050000e-27 134.0
30 TraesCS5B01G120400 chr7B 78.125 224 40 9 542 761 739564843 739564625 5.050000e-27 134.0
31 TraesCS5B01G120400 chr3D 93.007 143 9 1 3158 3299 379817481 379817623 2.930000e-49 207.0
32 TraesCS5B01G120400 chr6A 82.700 237 28 9 530 761 499820604 499820832 1.760000e-46 198.0
33 TraesCS5B01G120400 chr6A 97.826 46 1 0 2677 2722 558616777 558616822 6.670000e-11 80.5
34 TraesCS5B01G120400 chr6A 97.727 44 1 0 2679 2722 53932110 53932067 8.630000e-10 76.8
35 TraesCS5B01G120400 chr2D 90.000 140 11 3 3155 3293 336966969 336966832 2.300000e-40 178.0
36 TraesCS5B01G120400 chr2D 91.765 85 7 0 4242 4326 97219647 97219731 1.410000e-22 119.0
37 TraesCS5B01G120400 chr2D 97.727 44 1 0 2679 2722 78527773 78527730 8.630000e-10 76.8
38 TraesCS5B01G120400 chr2B 79.401 267 42 12 502 761 383356467 383356727 8.270000e-40 176.0
39 TraesCS5B01G120400 chr2B 89.286 140 12 3 3155 3293 404417863 404417726 1.070000e-38 172.0
40 TraesCS5B01G120400 chr3B 88.806 134 14 1 3163 3295 540196242 540196375 6.440000e-36 163.0
41 TraesCS5B01G120400 chr3B 91.111 90 8 0 4239 4328 684636715 684636626 1.090000e-23 122.0
42 TraesCS5B01G120400 chr2A 87.857 140 14 3 3155 3293 447146471 447146334 2.320000e-35 161.0
43 TraesCS5B01G120400 chr4A 80.693 202 30 9 566 761 32475350 32475152 1.800000e-31 148.0
44 TraesCS5B01G120400 chr6B 76.224 286 53 9 477 761 715045168 715044897 3.900000e-28 137.0
45 TraesCS5B01G120400 chr6B 90.805 87 6 2 6284 6369 157382427 157382512 1.830000e-21 115.0
46 TraesCS5B01G120400 chr6B 88.542 96 4 7 6279 6370 136521562 136521470 8.510000e-20 110.0
47 TraesCS5B01G120400 chr6B 92.453 53 2 2 2670 2722 622732456 622732506 3.100000e-09 75.0
48 TraesCS5B01G120400 chrUn 78.125 224 40 9 542 761 383317393 383317611 5.050000e-27 134.0
49 TraesCS5B01G120400 chrUn 97.727 44 1 0 2679 2722 69192805 69192848 8.630000e-10 76.8
50 TraesCS5B01G120400 chr4D 86.726 113 13 2 4242 4353 320026968 320027079 3.040000e-24 124.0
51 TraesCS5B01G120400 chr4D 88.636 88 8 2 6286 6372 53188134 53188048 1.100000e-18 106.0
52 TraesCS5B01G120400 chr1A 91.860 86 7 0 4241 4326 436259652 436259737 3.930000e-23 121.0
53 TraesCS5B01G120400 chr3A 90.361 83 6 2 6289 6369 46070207 46070289 3.060000e-19 108.0
54 TraesCS5B01G120400 chr3A 97.917 48 0 1 2679 2726 697753897 697753851 1.850000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G120400 chr5B 213251519 213259536 8017 True 14807.000000 14807 100.0000 1 8018 1 chr5B.!!$R1 8017
1 TraesCS5B01G120400 chr5A 227924820 227931846 7026 True 2676.750000 6501 94.5355 787 8018 4 chr5A.!!$R1 7231
2 TraesCS5B01G120400 chr5D 197143039 197151295 8256 False 1518.871429 4761 91.9270 3 7963 7 chr5D.!!$F1 7960
3 TraesCS5B01G120400 chr7D 393100219 393101223 1004 False 508.000000 508 76.4760 5251 6229 1 chr7D.!!$F1 978
4 TraesCS5B01G120400 chr7A 445480478 445481486 1008 False 451.000000 451 75.5140 5251 6229 1 chr7A.!!$F1 978
5 TraesCS5B01G120400 chr1B 375359731 375360730 999 True 359.000000 359 74.0200 5251 6229 1 chr1B.!!$R2 978
6 TraesCS5B01G120400 chr6D 403058716 403059354 638 False 335.000000 335 76.8400 5242 5870 1 chr6D.!!$F2 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 397 0.179234 TTCACACGGAAGCAACTGGA 59.821 50.000 0.00 0.00 0.00 3.86 F
1741 1839 0.032130 TCATACCGGCGATTGAGCTC 59.968 55.000 9.30 6.82 37.29 4.09 F
3199 3397 0.248702 CTTCGCTCCTCTAACTCCGC 60.249 60.000 0.00 0.00 0.00 5.54 F
3236 3434 0.179059 TTGCAGCTCACTTTGACGGA 60.179 50.000 0.00 0.00 0.00 4.69 F
3258 3456 0.179234 TGTCAAAACCGAGCTCCACA 59.821 50.000 8.47 0.00 0.00 4.17 F
3263 3461 0.250338 AAACCGAGCTCCACAACTCC 60.250 55.000 8.47 0.00 0.00 3.85 F
4534 4749 0.511221 CCTACGCCAAACACTTGACG 59.489 55.000 0.00 0.00 43.26 4.35 F
4575 4790 1.402787 CAGCAGGGGAACACAGTTTT 58.597 50.000 0.00 0.00 0.00 2.43 F
4590 4805 1.954382 AGTTTTCTTGGAAGGCGGAAC 59.046 47.619 0.00 0.00 0.00 3.62 F
4704 5392 3.129113 TGTTGTGCCATTGCTATGTGATC 59.871 43.478 7.37 0.00 38.71 2.92 F
6498 7300 0.736053 CTGTCGAGTAGAGGCACCTC 59.264 60.000 8.74 8.74 43.03 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 1861 0.904865 ACTCCTGTGCCATTCCTCGA 60.905 55.000 0.00 0.0 0.00 4.04 R
3217 3415 0.179059 TCCGTCAAAGTGAGCTGCAA 60.179 50.000 1.02 0.0 0.00 4.08 R
4575 4790 0.984230 ATGAGTTCCGCCTTCCAAGA 59.016 50.000 0.00 0.0 0.00 3.02 R
4704 5392 1.751927 GGGGTCAGGCTCTGCAATG 60.752 63.158 0.00 0.0 0.00 2.82 R
5187 5898 4.232188 AGAGAGATGAATTGTGTGGCAT 57.768 40.909 0.00 0.0 0.00 4.40 R
5442 6165 5.694458 AGTTCGTTTCTGCTGTTTTTGTTTT 59.306 32.000 0.00 0.0 0.00 2.43 R
5878 6644 0.323816 ACGGGCAGACAGAGAGATCA 60.324 55.000 0.00 0.0 0.00 2.92 R
5893 6662 1.677052 GGTTAGCTGTAGAGAGACGGG 59.323 57.143 0.00 0.0 0.00 5.28 R
5895 6664 2.277969 TCGGTTAGCTGTAGAGAGACG 58.722 52.381 0.00 0.0 0.00 4.18 R
6693 7497 3.077359 CCTGCCAAGTCCAAAACTCTAG 58.923 50.000 0.00 0.0 37.17 2.43 R
7526 8382 0.108138 CCAACCACTCGGCTAGGAAG 60.108 60.000 0.00 0.0 34.57 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 3.519579 CAAGTGATGCATCTCTCGAACT 58.480 45.455 26.73 17.89 30.95 3.01
44 45 3.162202 AGTGATGCATCTCTCGAACTG 57.838 47.619 26.32 0.00 0.00 3.16
45 46 2.159128 AGTGATGCATCTCTCGAACTGG 60.159 50.000 26.32 0.00 0.00 4.00
47 48 2.100418 TGATGCATCTCTCGAACTGGAG 59.900 50.000 26.32 0.00 35.32 3.86
48 49 0.820226 TGCATCTCTCGAACTGGAGG 59.180 55.000 0.14 0.00 34.74 4.30
49 50 1.107114 GCATCTCTCGAACTGGAGGA 58.893 55.000 0.14 0.00 34.74 3.71
50 51 1.686052 GCATCTCTCGAACTGGAGGAT 59.314 52.381 0.14 0.00 34.74 3.24
51 52 2.545532 GCATCTCTCGAACTGGAGGATG 60.546 54.545 12.60 12.60 40.65 3.51
53 54 1.285078 TCTCTCGAACTGGAGGATGGA 59.715 52.381 0.14 0.00 34.74 3.41
56 57 1.137872 CTCGAACTGGAGGATGGAAGG 59.862 57.143 0.00 0.00 0.00 3.46
57 58 0.905357 CGAACTGGAGGATGGAAGGT 59.095 55.000 0.00 0.00 0.00 3.50
58 59 1.279271 CGAACTGGAGGATGGAAGGTT 59.721 52.381 0.00 0.00 0.00 3.50
60 61 1.747444 ACTGGAGGATGGAAGGTTGT 58.253 50.000 0.00 0.00 0.00 3.32
61 62 2.065799 ACTGGAGGATGGAAGGTTGTT 58.934 47.619 0.00 0.00 0.00 2.83
62 63 2.447047 ACTGGAGGATGGAAGGTTGTTT 59.553 45.455 0.00 0.00 0.00 2.83
63 64 3.117131 ACTGGAGGATGGAAGGTTGTTTT 60.117 43.478 0.00 0.00 0.00 2.43
64 65 3.496331 TGGAGGATGGAAGGTTGTTTTC 58.504 45.455 0.00 0.00 0.00 2.29
66 67 3.759086 GGAGGATGGAAGGTTGTTTTCTC 59.241 47.826 0.00 0.00 0.00 2.87
67 68 3.412386 AGGATGGAAGGTTGTTTTCTCG 58.588 45.455 0.00 0.00 0.00 4.04
68 69 3.072476 AGGATGGAAGGTTGTTTTCTCGA 59.928 43.478 0.00 0.00 0.00 4.04
69 70 3.818773 GGATGGAAGGTTGTTTTCTCGAA 59.181 43.478 0.00 0.00 0.00 3.71
70 71 4.320275 GGATGGAAGGTTGTTTTCTCGAAC 60.320 45.833 0.00 0.00 0.00 3.95
71 72 2.946990 TGGAAGGTTGTTTTCTCGAACC 59.053 45.455 0.00 0.00 39.65 3.62
73 74 2.320745 AGGTTGTTTTCTCGAACCGT 57.679 45.000 0.00 0.00 43.39 4.83
74 75 2.635714 AGGTTGTTTTCTCGAACCGTT 58.364 42.857 0.00 0.00 43.39 4.44
75 76 3.011818 AGGTTGTTTTCTCGAACCGTTT 58.988 40.909 0.00 0.00 43.39 3.60
181 182 0.674895 GAACTGCGCCTCCAAGTCAT 60.675 55.000 4.18 0.00 0.00 3.06
184 185 0.674581 CTGCGCCTCCAAGTCATGAA 60.675 55.000 4.18 0.00 0.00 2.57
209 210 5.286082 CAGTTTGCACTGTTGTGTTTCTTAC 59.714 40.000 0.00 0.00 44.96 2.34
222 223 4.558080 GTGTTTCTTACGTCGAGATCTTCC 59.442 45.833 0.00 0.00 0.00 3.46
226 227 4.730657 TCTTACGTCGAGATCTTCCAAAC 58.269 43.478 0.00 0.00 0.00 2.93
234 235 4.276183 TCGAGATCTTCCAAACTAGATCCG 59.724 45.833 0.00 10.68 45.05 4.18
244 245 6.338146 TCCAAACTAGATCCGATGTTAACAG 58.662 40.000 14.65 1.06 0.00 3.16
252 253 5.411669 AGATCCGATGTTAACAGGTTTCAAC 59.588 40.000 14.65 2.13 0.00 3.18
253 254 4.452825 TCCGATGTTAACAGGTTTCAACA 58.547 39.130 14.65 3.72 35.53 3.33
315 336 9.777297 AACCATATTAAATTGTGCTTCAAAACT 57.223 25.926 0.00 0.00 39.62 2.66
321 342 9.995003 ATTAAATTGTGCTTCAAAACTATCCAA 57.005 25.926 0.00 0.00 39.62 3.53
322 343 9.823647 TTAAATTGTGCTTCAAAACTATCCAAA 57.176 25.926 0.00 0.00 39.62 3.28
323 344 7.951530 AATTGTGCTTCAAAACTATCCAAAG 57.048 32.000 0.00 0.00 39.62 2.77
324 345 6.463995 TTGTGCTTCAAAACTATCCAAAGT 57.536 33.333 0.00 0.00 32.64 2.66
325 346 5.830912 TGTGCTTCAAAACTATCCAAAGTG 58.169 37.500 0.00 0.00 0.00 3.16
326 347 5.359576 TGTGCTTCAAAACTATCCAAAGTGT 59.640 36.000 0.00 0.00 0.00 3.55
327 348 5.687285 GTGCTTCAAAACTATCCAAAGTGTG 59.313 40.000 0.00 0.00 0.00 3.82
328 349 4.681483 GCTTCAAAACTATCCAAAGTGTGC 59.319 41.667 0.00 0.00 0.00 4.57
329 350 5.507985 GCTTCAAAACTATCCAAAGTGTGCT 60.508 40.000 0.00 0.00 0.00 4.40
330 351 6.463995 TTCAAAACTATCCAAAGTGTGCTT 57.536 33.333 0.00 0.00 36.30 3.91
331 352 6.072112 TCAAAACTATCCAAAGTGTGCTTC 57.928 37.500 0.00 0.00 33.01 3.86
332 353 5.592282 TCAAAACTATCCAAAGTGTGCTTCA 59.408 36.000 0.00 0.00 33.01 3.02
333 354 5.438761 AAACTATCCAAAGTGTGCTTCAC 57.561 39.130 4.83 4.83 46.46 3.18
363 384 4.996113 CACGGTTGTGCTTCACAC 57.004 55.556 0.00 0.00 44.47 3.82
376 397 0.179234 TTCACACGGAAGCAACTGGA 59.821 50.000 0.00 0.00 0.00 3.86
377 398 0.531974 TCACACGGAAGCAACTGGAC 60.532 55.000 0.00 0.00 0.00 4.02
412 435 8.994429 TTGAAGAAGCACAATTAAAACTTTCA 57.006 26.923 0.00 0.00 0.00 2.69
413 436 8.406172 TGAAGAAGCACAATTAAAACTTTCAC 57.594 30.769 0.00 0.00 0.00 3.18
414 437 8.031864 TGAAGAAGCACAATTAAAACTTTCACA 58.968 29.630 0.00 0.00 0.00 3.58
415 438 7.755582 AGAAGCACAATTAAAACTTTCACAC 57.244 32.000 0.00 0.00 0.00 3.82
416 439 6.756542 AGAAGCACAATTAAAACTTTCACACC 59.243 34.615 0.00 0.00 0.00 4.16
418 441 6.581712 AGCACAATTAAAACTTTCACACCAT 58.418 32.000 0.00 0.00 0.00 3.55
419 442 7.721402 AGCACAATTAAAACTTTCACACCATA 58.279 30.769 0.00 0.00 0.00 2.74
421 444 8.821894 GCACAATTAAAACTTTCACACCATAAA 58.178 29.630 0.00 0.00 0.00 1.40
460 483 4.272504 CACGCCTCACTTTTGTTTTAGAGA 59.727 41.667 0.00 0.00 0.00 3.10
462 485 5.007724 ACGCCTCACTTTTGTTTTAGAGAAG 59.992 40.000 0.00 0.00 0.00 2.85
465 488 6.202226 CCTCACTTTTGTTTTAGAGAAGCAC 58.798 40.000 0.00 0.00 0.00 4.40
482 505 1.411394 CACAACTGCGCTTGGAAATG 58.589 50.000 9.73 0.61 0.00 2.32
490 513 1.732077 GCGCTTGGAAATGCAATTCGA 60.732 47.619 8.37 1.56 33.67 3.71
495 518 2.101783 TGGAAATGCAATTCGATGCCT 58.898 42.857 8.37 0.00 45.83 4.75
497 520 2.099592 GGAAATGCAATTCGATGCCTGA 59.900 45.455 8.37 0.00 45.83 3.86
507 530 1.222766 CGATGCCTGAGCTCATCTGC 61.223 60.000 18.63 19.63 40.80 4.26
511 534 1.521010 CCTGAGCTCATCTGCACCG 60.521 63.158 18.63 2.34 34.99 4.94
568 600 7.936496 TTTAGATGGAAGATGTTACAATGCA 57.064 32.000 0.00 0.00 27.15 3.96
570 602 6.387041 AGATGGAAGATGTTACAATGCATG 57.613 37.500 0.00 0.00 27.15 4.06
580 612 4.215185 TGTTACAATGCATGATGTTCGTGT 59.785 37.500 9.22 5.58 35.86 4.49
588 620 5.288015 TGCATGATGTTCGTGTCAAATTTT 58.712 33.333 0.00 0.00 35.86 1.82
591 623 6.801377 GCATGATGTTCGTGTCAAATTTTAGA 59.199 34.615 0.00 0.00 35.86 2.10
599 631 6.367421 TCGTGTCAAATTTTAGATTGTTCGG 58.633 36.000 0.00 0.00 0.00 4.30
606 638 8.236586 TCAAATTTTAGATTGTTCGGACATCTG 58.763 33.333 15.14 2.83 35.29 2.90
609 641 5.914898 TTAGATTGTTCGGACATCTGAGA 57.085 39.130 15.14 0.00 35.29 3.27
625 657 3.504906 TCTGAGAAGCTCATGGCAAAAAG 59.495 43.478 8.58 0.00 39.92 2.27
632 664 7.095270 AGAAGCTCATGGCAAAAAGAATAAAG 58.905 34.615 8.58 0.00 44.79 1.85
644 676 8.376942 GCAAAAAGAATAAAGTCGTCAAAACAA 58.623 29.630 0.00 0.00 0.00 2.83
649 681 9.878599 AAGAATAAAGTCGTCAAAACAATACTG 57.121 29.630 0.00 0.00 0.00 2.74
650 682 9.052759 AGAATAAAGTCGTCAAAACAATACTGT 57.947 29.630 0.00 0.00 37.39 3.55
653 685 7.542534 AAAGTCGTCAAAACAATACTGTACA 57.457 32.000 0.00 0.00 33.45 2.90
654 686 7.724305 AAGTCGTCAAAACAATACTGTACAT 57.276 32.000 0.00 0.00 33.45 2.29
711 743 7.807977 TTTTCTGAAAGCTACTGAAATGTCT 57.192 32.000 18.70 0.00 36.00 3.41
717 749 8.311650 TGAAAGCTACTGAAATGTCTAAACTC 57.688 34.615 0.00 0.00 0.00 3.01
721 753 5.062308 GCTACTGAAATGTCTAAACTCCACG 59.938 44.000 0.00 0.00 0.00 4.94
729 761 5.682943 TGTCTAAACTCCACGAAATTTGG 57.317 39.130 0.00 0.00 35.18 3.28
732 764 4.764823 TCTAAACTCCACGAAATTTGGCAT 59.235 37.500 0.00 0.00 33.71 4.40
736 768 1.543802 TCCACGAAATTTGGCATGGAC 59.456 47.619 8.03 0.00 33.71 4.02
741 773 3.244976 CGAAATTTGGCATGGACTTCAC 58.755 45.455 0.00 0.00 0.00 3.18
742 774 3.305267 CGAAATTTGGCATGGACTTCACA 60.305 43.478 0.00 0.00 0.00 3.58
746 778 0.182299 TGGCATGGACTTCACACACA 59.818 50.000 0.00 0.00 0.00 3.72
754 786 2.417933 GGACTTCACACACATGAGCATC 59.582 50.000 0.00 0.00 0.00 3.91
908 1001 2.767496 CTCTGAGGCCAGGGGGAG 60.767 72.222 5.01 0.95 40.76 4.30
951 1045 1.349259 CGGGTGCGTATATAAGCCGC 61.349 60.000 16.56 12.56 46.48 6.53
977 1071 4.222114 GGACGGTTACCTTTATATCGTCG 58.778 47.826 0.00 0.00 44.06 5.12
1005 1099 1.538950 ACCTAACGAGAACCAGTCGAC 59.461 52.381 7.70 7.70 39.92 4.20
1088 1182 0.335361 AGAAGTCGAGCCTCCCCTTA 59.665 55.000 0.00 0.00 0.00 2.69
1153 1247 0.036875 CCTCCAAGAAGCGGAAACCT 59.963 55.000 0.00 0.00 30.33 3.50
1240 1334 3.157087 GGAATTCAACCAAGAGGAGCAA 58.843 45.455 7.93 0.00 38.69 3.91
1484 1578 1.876497 AACTTAACCCGCGGCTCGTA 61.876 55.000 22.85 5.35 36.19 3.43
1540 1637 4.818534 AGAACACAAGTGCTGTATGTTG 57.181 40.909 0.00 0.00 36.10 3.33
1555 1652 1.288350 TGTTGCAGCAAAACATGTGC 58.712 45.000 10.11 0.00 42.55 4.57
1566 1663 2.479566 AACATGTGCTGTGTAGGAGG 57.520 50.000 0.00 0.00 38.39 4.30
1571 1668 2.815158 TGTGCTGTGTAGGAGGACATA 58.185 47.619 0.00 0.00 36.92 2.29
1606 1704 0.686789 TGTGCTGACTGGCTACATGT 59.313 50.000 2.69 2.69 0.00 3.21
1672 1770 2.711009 ACCACATCTGTTGGAAGGAAGA 59.289 45.455 0.00 0.00 0.00 2.87
1741 1839 0.032130 TCATACCGGCGATTGAGCTC 59.968 55.000 9.30 6.82 37.29 4.09
1763 1861 4.649674 TCCTCTATAACCTGCATTTCTCGT 59.350 41.667 0.00 0.00 0.00 4.18
1852 1950 4.141620 CCCAGAGAAACCATGCTACTACAT 60.142 45.833 0.00 0.00 0.00 2.29
1889 1987 1.865865 ACCTGTGTTAGCACTGTTCG 58.134 50.000 11.22 1.29 45.44 3.95
1904 2002 3.006967 ACTGTTCGGCACTAAACTCTGAT 59.993 43.478 0.00 0.00 0.00 2.90
1916 2014 9.534565 GCACTAAACTCTGATCATGAGTATAAA 57.465 33.333 20.86 10.70 43.16 1.40
2059 2163 9.967245 GATTTTTGTGGAAACTTTTTGTACTTC 57.033 29.630 0.00 0.00 0.00 3.01
2116 2220 5.607477 TCAGTCCAAAATTACTTCGACAGT 58.393 37.500 5.74 5.74 39.87 3.55
2140 2244 5.481824 TGAGACTGAACAGATCACCATAGTT 59.518 40.000 8.87 0.00 33.47 2.24
2453 2557 5.296813 ACGGAGCAGATTTGTTACAAATC 57.703 39.130 31.84 31.84 37.01 2.17
2555 2659 7.967890 AATCTATAATTCATCATCGTGTGCA 57.032 32.000 0.00 0.00 0.00 4.57
2608 2712 6.369629 TCCCATCTCTTTCTTTGGTTAAACA 58.630 36.000 0.00 0.00 0.00 2.83
2609 2713 7.010160 TCCCATCTCTTTCTTTGGTTAAACAT 58.990 34.615 0.00 0.00 0.00 2.71
2611 2715 8.802267 CCCATCTCTTTCTTTGGTTAAACATTA 58.198 33.333 0.00 0.00 0.00 1.90
2707 2813 6.464465 CCCTCCGATCCATATTACTTGTCTTT 60.464 42.308 0.00 0.00 0.00 2.52
2798 2963 7.534085 AACACCACATATCAACGTATGTAAG 57.466 36.000 1.52 0.39 41.96 2.34
2799 2964 6.046593 ACACCACATATCAACGTATGTAAGG 58.953 40.000 1.52 3.36 41.96 2.69
2857 3022 2.255538 TGGGGTCACCATTCCCAAA 58.744 52.632 0.00 0.00 46.80 3.28
2862 3027 2.497273 GGGTCACCATTCCCAAATTCTG 59.503 50.000 0.00 0.00 42.95 3.02
2870 3035 4.768968 CCATTCCCAAATTCTGAACTGACT 59.231 41.667 0.00 0.00 0.00 3.41
2970 3158 2.566833 AGCTGGTTGCATAACTGACA 57.433 45.000 0.00 0.00 45.94 3.58
3107 3305 9.473007 TCATCCTCCATGTATCAAATAAACAAA 57.527 29.630 0.00 0.00 33.66 2.83
3108 3306 9.740239 CATCCTCCATGTATCAAATAAACAAAG 57.260 33.333 0.00 0.00 0.00 2.77
3109 3307 8.877864 TCCTCCATGTATCAAATAAACAAAGT 57.122 30.769 0.00 0.00 0.00 2.66
3110 3308 9.308000 TCCTCCATGTATCAAATAAACAAAGTT 57.692 29.630 0.00 0.00 0.00 2.66
3165 3363 9.965902 ATTAGGCATGTCTTATTCTATTAAGGG 57.034 33.333 4.49 0.00 31.41 3.95
3166 3364 7.633018 AGGCATGTCTTATTCTATTAAGGGA 57.367 36.000 0.00 0.00 31.41 4.20
3167 3365 7.684529 AGGCATGTCTTATTCTATTAAGGGAG 58.315 38.462 0.00 0.00 31.41 4.30
3168 3366 7.293535 AGGCATGTCTTATTCTATTAAGGGAGT 59.706 37.037 0.00 0.00 31.41 3.85
3169 3367 7.389053 GGCATGTCTTATTCTATTAAGGGAGTG 59.611 40.741 0.00 0.00 31.41 3.51
3170 3368 7.934120 GCATGTCTTATTCTATTAAGGGAGTGT 59.066 37.037 0.00 0.00 31.41 3.55
3171 3369 9.838339 CATGTCTTATTCTATTAAGGGAGTGTT 57.162 33.333 0.00 0.00 31.41 3.32
3173 3371 8.195436 TGTCTTATTCTATTAAGGGAGTGTTCG 58.805 37.037 0.00 0.00 31.41 3.95
3174 3372 7.652507 GTCTTATTCTATTAAGGGAGTGTTCGG 59.347 40.741 0.00 0.00 31.41 4.30
3175 3373 5.952347 ATTCTATTAAGGGAGTGTTCGGT 57.048 39.130 0.00 0.00 0.00 4.69
3176 3374 5.750352 TTCTATTAAGGGAGTGTTCGGTT 57.250 39.130 0.00 0.00 0.00 4.44
3177 3375 5.750352 TCTATTAAGGGAGTGTTCGGTTT 57.250 39.130 0.00 0.00 0.00 3.27
3178 3376 5.727434 TCTATTAAGGGAGTGTTCGGTTTC 58.273 41.667 0.00 0.00 0.00 2.78
3179 3377 4.635699 ATTAAGGGAGTGTTCGGTTTCT 57.364 40.909 0.00 0.00 0.00 2.52
3180 3378 2.545537 AAGGGAGTGTTCGGTTTCTC 57.454 50.000 0.00 0.00 0.00 2.87
3181 3379 1.718280 AGGGAGTGTTCGGTTTCTCT 58.282 50.000 0.00 0.00 0.00 3.10
3182 3380 2.047830 AGGGAGTGTTCGGTTTCTCTT 58.952 47.619 0.00 0.00 0.00 2.85
3183 3381 2.037381 AGGGAGTGTTCGGTTTCTCTTC 59.963 50.000 0.00 0.00 0.00 2.87
3184 3382 2.059541 GGAGTGTTCGGTTTCTCTTCG 58.940 52.381 0.00 0.00 0.00 3.79
3185 3383 1.456165 GAGTGTTCGGTTTCTCTTCGC 59.544 52.381 0.00 0.00 0.00 4.70
3186 3384 1.068741 AGTGTTCGGTTTCTCTTCGCT 59.931 47.619 0.00 0.00 0.00 4.93
3187 3385 1.456165 GTGTTCGGTTTCTCTTCGCTC 59.544 52.381 0.00 0.00 0.00 5.03
3188 3386 1.069255 GTTCGGTTTCTCTTCGCTCC 58.931 55.000 0.00 0.00 0.00 4.70
3189 3387 0.966920 TTCGGTTTCTCTTCGCTCCT 59.033 50.000 0.00 0.00 0.00 3.69
3190 3388 0.526662 TCGGTTTCTCTTCGCTCCTC 59.473 55.000 0.00 0.00 0.00 3.71
3191 3389 0.528470 CGGTTTCTCTTCGCTCCTCT 59.472 55.000 0.00 0.00 0.00 3.69
3192 3390 1.743958 CGGTTTCTCTTCGCTCCTCTA 59.256 52.381 0.00 0.00 0.00 2.43
3193 3391 2.163815 CGGTTTCTCTTCGCTCCTCTAA 59.836 50.000 0.00 0.00 0.00 2.10
3194 3392 3.513662 GGTTTCTCTTCGCTCCTCTAAC 58.486 50.000 0.00 0.00 0.00 2.34
3195 3393 3.193903 GGTTTCTCTTCGCTCCTCTAACT 59.806 47.826 0.00 0.00 0.00 2.24
3196 3394 4.417506 GTTTCTCTTCGCTCCTCTAACTC 58.582 47.826 0.00 0.00 0.00 3.01
3197 3395 2.645802 TCTCTTCGCTCCTCTAACTCC 58.354 52.381 0.00 0.00 0.00 3.85
3198 3396 1.332375 CTCTTCGCTCCTCTAACTCCG 59.668 57.143 0.00 0.00 0.00 4.63
3199 3397 0.248702 CTTCGCTCCTCTAACTCCGC 60.249 60.000 0.00 0.00 0.00 5.54
3200 3398 0.680280 TTCGCTCCTCTAACTCCGCT 60.680 55.000 0.00 0.00 0.00 5.52
3201 3399 1.096386 TCGCTCCTCTAACTCCGCTC 61.096 60.000 0.00 0.00 0.00 5.03
3202 3400 1.737201 GCTCCTCTAACTCCGCTCC 59.263 63.158 0.00 0.00 0.00 4.70
3203 3401 1.740332 GCTCCTCTAACTCCGCTCCC 61.740 65.000 0.00 0.00 0.00 4.30
3204 3402 1.448922 CTCCTCTAACTCCGCTCCCG 61.449 65.000 0.00 0.00 0.00 5.14
3220 3418 3.635204 CGGAGCGGATGAGATTGC 58.365 61.111 0.00 0.00 0.00 3.56
3221 3419 1.227350 CGGAGCGGATGAGATTGCA 60.227 57.895 0.00 0.00 0.00 4.08
3222 3420 1.220169 CGGAGCGGATGAGATTGCAG 61.220 60.000 0.00 0.00 0.00 4.41
3223 3421 1.505477 GGAGCGGATGAGATTGCAGC 61.505 60.000 0.00 0.00 0.00 5.25
3224 3422 0.532417 GAGCGGATGAGATTGCAGCT 60.532 55.000 0.00 0.00 36.06 4.24
3225 3423 0.532417 AGCGGATGAGATTGCAGCTC 60.532 55.000 10.71 10.71 0.00 4.09
3226 3424 0.812811 GCGGATGAGATTGCAGCTCA 60.813 55.000 19.53 19.53 45.52 4.26
3227 3425 0.935898 CGGATGAGATTGCAGCTCAC 59.064 55.000 19.61 14.21 44.39 3.51
3228 3426 1.472904 CGGATGAGATTGCAGCTCACT 60.473 52.381 19.61 11.34 44.39 3.41
3229 3427 2.641305 GGATGAGATTGCAGCTCACTT 58.359 47.619 19.61 8.47 44.39 3.16
3230 3428 3.015327 GGATGAGATTGCAGCTCACTTT 58.985 45.455 19.61 7.88 44.39 2.66
3231 3429 3.181499 GGATGAGATTGCAGCTCACTTTG 60.181 47.826 19.61 0.00 44.39 2.77
3232 3430 3.130280 TGAGATTGCAGCTCACTTTGA 57.870 42.857 15.01 0.00 37.46 2.69
3233 3431 2.810274 TGAGATTGCAGCTCACTTTGAC 59.190 45.455 15.01 0.00 37.46 3.18
3234 3432 1.802960 AGATTGCAGCTCACTTTGACG 59.197 47.619 0.00 0.00 0.00 4.35
3235 3433 0.877071 ATTGCAGCTCACTTTGACGG 59.123 50.000 0.00 0.00 0.00 4.79
3236 3434 0.179059 TTGCAGCTCACTTTGACGGA 60.179 50.000 0.00 0.00 0.00 4.69
3237 3435 0.601046 TGCAGCTCACTTTGACGGAG 60.601 55.000 0.00 0.00 0.00 4.63
3241 3439 3.595691 CTCACTTTGACGGAGCTGT 57.404 52.632 0.00 0.00 0.00 4.40
3242 3440 1.423395 CTCACTTTGACGGAGCTGTC 58.577 55.000 0.00 2.51 39.37 3.51
3243 3441 0.750249 TCACTTTGACGGAGCTGTCA 59.250 50.000 8.01 8.01 46.63 3.58
3248 3446 3.000815 TGACGGAGCTGTCAAAACC 57.999 52.632 9.58 0.00 45.40 3.27
3249 3447 0.878523 TGACGGAGCTGTCAAAACCG 60.879 55.000 9.58 5.38 45.40 4.44
3250 3448 0.599204 GACGGAGCTGTCAAAACCGA 60.599 55.000 14.00 0.00 45.31 4.69
3251 3449 0.600255 ACGGAGCTGTCAAAACCGAG 60.600 55.000 14.00 0.00 45.31 4.63
3252 3450 1.869690 GGAGCTGTCAAAACCGAGC 59.130 57.895 0.00 0.00 0.00 5.03
3253 3451 0.603975 GGAGCTGTCAAAACCGAGCT 60.604 55.000 0.00 0.00 44.50 4.09
3254 3452 2.919971 AGCTGTCAAAACCGAGCTC 58.080 52.632 2.73 2.73 37.17 4.09
3255 3453 0.603975 AGCTGTCAAAACCGAGCTCC 60.604 55.000 8.47 0.00 37.17 4.70
3256 3454 0.884704 GCTGTCAAAACCGAGCTCCA 60.885 55.000 8.47 0.00 0.00 3.86
3257 3455 0.868406 CTGTCAAAACCGAGCTCCAC 59.132 55.000 8.47 0.00 0.00 4.02
3258 3456 0.179234 TGTCAAAACCGAGCTCCACA 59.821 50.000 8.47 0.00 0.00 4.17
3259 3457 1.305201 GTCAAAACCGAGCTCCACAA 58.695 50.000 8.47 0.00 0.00 3.33
3260 3458 1.002792 GTCAAAACCGAGCTCCACAAC 60.003 52.381 8.47 0.00 0.00 3.32
3261 3459 1.134220 TCAAAACCGAGCTCCACAACT 60.134 47.619 8.47 0.00 0.00 3.16
3262 3460 1.264288 CAAAACCGAGCTCCACAACTC 59.736 52.381 8.47 0.00 0.00 3.01
3263 3461 0.250338 AAACCGAGCTCCACAACTCC 60.250 55.000 8.47 0.00 0.00 3.85
3264 3462 2.125912 CCGAGCTCCACAACTCCG 60.126 66.667 8.47 0.00 0.00 4.63
3265 3463 2.125912 CGAGCTCCACAACTCCGG 60.126 66.667 8.47 0.00 0.00 5.14
3266 3464 2.266055 GAGCTCCACAACTCCGGG 59.734 66.667 0.87 0.00 0.00 5.73
3267 3465 3.316573 GAGCTCCACAACTCCGGGG 62.317 68.421 0.00 0.00 0.00 5.73
3268 3466 3.319198 GCTCCACAACTCCGGGGA 61.319 66.667 9.33 0.33 0.00 4.81
3269 3467 2.982130 CTCCACAACTCCGGGGAG 59.018 66.667 9.33 13.14 46.91 4.30
3270 3468 3.316573 CTCCACAACTCCGGGGAGC 62.317 68.421 9.33 0.00 45.54 4.70
3271 3469 4.760047 CCACAACTCCGGGGAGCG 62.760 72.222 9.33 8.69 45.54 5.03
3272 3470 4.760047 CACAACTCCGGGGAGCGG 62.760 72.222 9.33 9.31 45.54 5.52
3274 3472 3.470888 CAACTCCGGGGAGCGGAT 61.471 66.667 9.33 0.00 45.54 4.18
3275 3473 2.131709 CAACTCCGGGGAGCGGATA 61.132 63.158 9.33 0.00 45.54 2.59
3276 3474 1.833049 AACTCCGGGGAGCGGATAG 60.833 63.158 9.33 0.00 45.54 2.08
3277 3475 2.115480 CTCCGGGGAGCGGATAGA 59.885 66.667 0.00 0.00 35.31 1.98
3278 3476 1.304547 CTCCGGGGAGCGGATAGAT 60.305 63.158 0.00 0.00 35.31 1.98
3279 3477 0.900647 CTCCGGGGAGCGGATAGATT 60.901 60.000 0.00 0.00 35.31 2.40
3280 3478 0.898789 TCCGGGGAGCGGATAGATTC 60.899 60.000 0.00 0.00 0.00 2.52
3281 3479 1.592223 CGGGGAGCGGATAGATTCC 59.408 63.158 0.00 0.00 41.59 3.01
3290 3488 2.171341 GGATAGATTCCGAACAGGGC 57.829 55.000 0.00 0.00 41.52 5.19
3291 3489 1.270893 GGATAGATTCCGAACAGGGCC 60.271 57.143 0.00 0.00 41.52 5.80
3511 3709 1.228245 ACCACGCCTTGCTGAATGT 60.228 52.632 0.00 0.00 0.00 2.71
3524 3722 3.251729 TGCTGAATGTCAAAAGCAGACTC 59.748 43.478 0.00 0.00 40.59 3.36
3526 3724 3.149196 TGAATGTCAAAAGCAGACTCCC 58.851 45.455 0.00 0.00 36.94 4.30
3549 3747 7.878127 TCCCTTAGAGAGATAAAACACAAACAG 59.122 37.037 0.00 0.00 0.00 3.16
3558 3756 2.051334 AACACAAACAGGTGCAGCTA 57.949 45.000 19.71 0.00 42.55 3.32
3609 3807 2.626149 GGGAGTAGAAAGTAGGAGGCCA 60.626 54.545 5.01 0.00 0.00 5.36
3619 3817 2.649816 AGTAGGAGGCCAAAGACCAATT 59.350 45.455 5.01 0.00 0.00 2.32
3623 3821 5.466127 AGGAGGCCAAAGACCAATTATTA 57.534 39.130 5.01 0.00 0.00 0.98
3624 3822 6.030727 AGGAGGCCAAAGACCAATTATTAT 57.969 37.500 5.01 0.00 0.00 1.28
3719 3917 9.515226 AATAAAGGAGCTAAATAACAAGTGTCA 57.485 29.630 0.00 0.00 0.00 3.58
3744 3942 9.403110 CAAATATCTGTTCTTGCCAATATAAGC 57.597 33.333 0.00 0.00 0.00 3.09
3864 4076 6.533730 TGCTATATGTTCCCCATCAGTTTAG 58.466 40.000 0.00 0.00 34.86 1.85
3944 4156 7.988028 GCTCAGTAGAAATTAAGTGGGTATCTT 59.012 37.037 0.00 0.00 0.00 2.40
3990 4202 2.551071 GGTATCAAGACCATAGCCAGCC 60.551 54.545 0.00 0.00 39.51 4.85
3999 4211 2.244769 ACCATAGCCAGCCAATAAAGGT 59.755 45.455 0.00 0.00 0.00 3.50
4015 4227 8.902806 CCAATAAAGGTATTTAGTTGAGCATCA 58.097 33.333 0.00 0.00 37.57 3.07
4070 4282 1.558294 AGATGGTCAGCTCTGATGCAA 59.442 47.619 2.62 0.00 42.18 4.08
4109 4321 2.961062 GCACCTCCCTGATTTGCATAAT 59.039 45.455 0.00 0.00 33.24 1.28
4183 4396 6.862711 ACTACCTCTAAGCTTTGTGAAAAC 57.137 37.500 3.20 0.00 0.00 2.43
4305 4519 6.807230 TGTTTTAGCTTGCAAAAACGTCTTAA 59.193 30.769 15.90 0.06 44.67 1.85
4389 4603 0.617413 CTCAACCTGACAGCTGGGAT 59.383 55.000 19.93 1.15 37.43 3.85
4428 4642 1.127343 ATAGAGTCTGCCTCCAAGCC 58.873 55.000 1.86 0.00 41.47 4.35
4465 4680 3.086282 GTTTTTGGATTAGAGGCCGGAA 58.914 45.455 5.05 0.00 0.00 4.30
4510 4725 5.949735 CTCTTAAGAGGAGAGTGTGTCTTC 58.050 45.833 22.67 0.00 38.48 2.87
4534 4749 0.511221 CCTACGCCAAACACTTGACG 59.489 55.000 0.00 0.00 43.26 4.35
4535 4750 4.211986 ACGCCAAACACTTGACGT 57.788 50.000 0.00 0.00 45.32 4.34
4553 4768 3.383761 ACGTTTGGACCTAACTGTAACG 58.616 45.455 15.42 0.00 41.64 3.18
4575 4790 1.402787 CAGCAGGGGAACACAGTTTT 58.597 50.000 0.00 0.00 0.00 2.43
4590 4805 1.954382 AGTTTTCTTGGAAGGCGGAAC 59.046 47.619 0.00 0.00 0.00 3.62
4697 5385 4.558178 CTTGATTTGTTGTGCCATTGCTA 58.442 39.130 0.00 0.00 38.71 3.49
4704 5392 3.129113 TGTTGTGCCATTGCTATGTGATC 59.871 43.478 7.37 0.00 38.71 2.92
4853 5561 6.378280 GCCTTCCCCAGGTATATTTTCATATG 59.622 42.308 0.00 0.00 46.07 1.78
4856 5565 5.555542 TCCCCAGGTATATTTTCATATGGCT 59.444 40.000 2.13 0.00 0.00 4.75
4861 5570 8.321353 CCAGGTATATTTTCATATGGCTGTCTA 58.679 37.037 2.13 0.00 0.00 2.59
5196 5907 7.643569 ATGTAAGAAAATGATATGCCACACA 57.356 32.000 0.00 0.00 0.00 3.72
5442 6165 7.178097 CAGATAGAGTGTGAAGATATCCATGGA 59.822 40.741 18.88 18.88 0.00 3.41
5698 6440 6.699642 CCAAAGGTTTGTAATGTTACCTGTTG 59.300 38.462 0.00 0.00 40.03 3.33
5895 6664 4.679373 TTAATGATCTCTCTGTCTGCCC 57.321 45.455 0.00 0.00 0.00 5.36
5908 6677 1.032657 TCTGCCCGTCTCTCTACAGC 61.033 60.000 0.00 0.00 0.00 4.40
5913 6682 1.677052 CCCGTCTCTCTACAGCTAACC 59.323 57.143 0.00 0.00 0.00 2.85
6255 7031 5.043903 TGTCAAGTTCTTTCTGAAGACTCG 58.956 41.667 0.00 0.00 41.46 4.18
6329 7112 4.438744 GGAATTACTTGTCGCAGAAATGGG 60.439 45.833 0.00 0.00 39.69 4.00
6396 7198 2.737679 CGGACGGAGGGAGTATGTTTTC 60.738 54.545 0.00 0.00 0.00 2.29
6410 7212 7.112984 GGAGTATGTTTTCGTTTTGCTTTACAG 59.887 37.037 0.00 0.00 0.00 2.74
6498 7300 0.736053 CTGTCGAGTAGAGGCACCTC 59.264 60.000 8.74 8.74 43.03 3.85
6533 7335 4.079730 TCCTTATCCTCTCTGTGCTAGTGA 60.080 45.833 0.00 0.00 0.00 3.41
6576 7380 3.823304 ACCTTTGGCACTTTCAGAATCTC 59.177 43.478 0.00 0.00 0.00 2.75
6590 7394 4.821805 TCAGAATCTCTTTTCGTTGGCTTT 59.178 37.500 0.00 0.00 0.00 3.51
6630 7434 4.884164 GCTGGGAAGTAGCTGATATTTGTT 59.116 41.667 0.00 0.00 38.14 2.83
6669 7473 5.571784 AATGTCGATGTTTGATGAGCATT 57.428 34.783 0.00 0.00 28.37 3.56
6693 7497 5.880054 AGTGAGTTAATTGTGTGTATGGC 57.120 39.130 0.00 0.00 0.00 4.40
6911 7716 4.754667 GGACGGAAGGGCGGTGAC 62.755 72.222 0.00 0.00 0.00 3.67
6951 7756 1.059006 ATTCTAGAGGGCCAGCCAGG 61.059 60.000 11.50 0.00 41.84 4.45
6961 7766 4.980702 CAGCCAGGCAGCCAACCA 62.981 66.667 15.80 0.00 0.00 3.67
6962 7767 4.223125 AGCCAGGCAGCCAACCAA 62.223 61.111 15.80 0.00 0.00 3.67
6963 7768 3.688159 GCCAGGCAGCCAACCAAG 61.688 66.667 15.80 0.00 0.00 3.61
7025 7830 6.736110 ATTAAGCATTGATACCATGCCTTT 57.264 33.333 1.27 0.00 41.88 3.11
7150 7956 1.259609 CACTGGGGTGTGATGCAATT 58.740 50.000 0.00 0.00 40.12 2.32
7151 7957 1.619827 CACTGGGGTGTGATGCAATTT 59.380 47.619 0.00 0.00 40.12 1.82
7152 7958 2.037511 CACTGGGGTGTGATGCAATTTT 59.962 45.455 0.00 0.00 40.12 1.82
7153 7959 2.299867 ACTGGGGTGTGATGCAATTTTC 59.700 45.455 0.00 0.00 0.00 2.29
7154 7960 1.622811 TGGGGTGTGATGCAATTTTCC 59.377 47.619 0.00 0.00 0.00 3.13
7155 7961 1.901833 GGGGTGTGATGCAATTTTCCT 59.098 47.619 0.00 0.00 0.00 3.36
7156 7962 2.354003 GGGGTGTGATGCAATTTTCCTG 60.354 50.000 0.00 0.00 0.00 3.86
7157 7963 2.299867 GGGTGTGATGCAATTTTCCTGT 59.700 45.455 0.00 0.00 0.00 4.00
7158 7964 3.319755 GGTGTGATGCAATTTTCCTGTG 58.680 45.455 0.00 0.00 0.00 3.66
7159 7965 3.319755 GTGTGATGCAATTTTCCTGTGG 58.680 45.455 0.00 0.00 0.00 4.17
7160 7966 3.005684 GTGTGATGCAATTTTCCTGTGGA 59.994 43.478 0.00 0.00 0.00 4.02
7161 7967 3.640498 TGTGATGCAATTTTCCTGTGGAA 59.360 39.130 0.00 0.00 40.27 3.53
7162 7968 4.283978 TGTGATGCAATTTTCCTGTGGAAT 59.716 37.500 0.00 0.00 41.71 3.01
7163 7969 4.628333 GTGATGCAATTTTCCTGTGGAATG 59.372 41.667 0.00 0.00 41.71 2.67
7164 7970 3.681593 TGCAATTTTCCTGTGGAATGG 57.318 42.857 0.00 0.00 41.71 3.16
7165 7971 3.237746 TGCAATTTTCCTGTGGAATGGA 58.762 40.909 0.00 0.00 41.71 3.41
7179 8001 5.105269 TGTGGAATGGATTTACGTACTAGCA 60.105 40.000 0.00 0.00 0.00 3.49
7367 8208 7.833285 ATTTTACCATACAAGTCTGGTTGTT 57.167 32.000 14.36 0.00 43.21 2.83
7468 8324 4.614555 TTTCGTTATTGCTGCCATACTG 57.385 40.909 0.00 0.00 0.00 2.74
7469 8325 2.560504 TCGTTATTGCTGCCATACTGG 58.439 47.619 0.00 0.00 41.55 4.00
7484 8340 2.652941 ACTGGTGTGTTTGCAAAGTG 57.347 45.000 13.26 0.80 0.00 3.16
7485 8341 1.892474 ACTGGTGTGTTTGCAAAGTGT 59.108 42.857 13.26 1.40 0.00 3.55
7486 8342 3.085533 ACTGGTGTGTTTGCAAAGTGTA 58.914 40.909 13.26 0.00 0.00 2.90
7488 8344 3.085533 TGGTGTGTTTGCAAAGTGTAGT 58.914 40.909 13.26 0.00 0.00 2.73
7489 8345 4.262617 TGGTGTGTTTGCAAAGTGTAGTA 58.737 39.130 13.26 0.00 0.00 1.82
7491 8347 4.334481 GGTGTGTTTGCAAAGTGTAGTAGT 59.666 41.667 13.26 0.00 0.00 2.73
7492 8348 5.524646 GGTGTGTTTGCAAAGTGTAGTAGTA 59.475 40.000 13.26 0.00 0.00 1.82
7494 8350 6.257193 GTGTGTTTGCAAAGTGTAGTAGTAGT 59.743 38.462 13.26 0.00 0.00 2.73
7495 8351 7.436080 GTGTGTTTGCAAAGTGTAGTAGTAGTA 59.564 37.037 13.26 0.00 0.00 1.82
7497 8353 7.650903 GTGTTTGCAAAGTGTAGTAGTAGTAGT 59.349 37.037 13.26 0.00 0.00 2.73
7498 8354 8.849168 TGTTTGCAAAGTGTAGTAGTAGTAGTA 58.151 33.333 13.26 0.00 0.00 1.82
7499 8355 9.339492 GTTTGCAAAGTGTAGTAGTAGTAGTAG 57.661 37.037 13.26 0.00 0.00 2.57
7500 8356 8.627208 TTGCAAAGTGTAGTAGTAGTAGTAGT 57.373 34.615 0.00 0.00 0.00 2.73
7501 8357 9.725019 TTGCAAAGTGTAGTAGTAGTAGTAGTA 57.275 33.333 0.00 0.00 0.00 1.82
7502 8358 9.376075 TGCAAAGTGTAGTAGTAGTAGTAGTAG 57.624 37.037 0.49 0.00 0.00 2.57
7503 8359 9.377312 GCAAAGTGTAGTAGTAGTAGTAGTAGT 57.623 37.037 5.34 5.34 0.00 2.73
7524 8380 9.487442 AGTAGTAGTAGTAGTAGTAGTGTTCCT 57.513 37.037 9.28 0.00 0.00 3.36
7554 8410 0.179029 CGAGTGGTTGGACTTGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
7598 8454 3.160748 GAGCAGCCTCTCCCCCTC 61.161 72.222 0.00 0.00 35.16 4.30
7682 8538 1.674651 TCTCCCTGTCGTCACGGAG 60.675 63.158 17.23 17.23 43.42 4.63
7963 8819 1.485895 TGATCGATCAAGCCATGTCCA 59.514 47.619 25.44 0.00 33.08 4.02
7964 8820 2.105306 TGATCGATCAAGCCATGTCCAT 59.895 45.455 25.44 0.00 33.08 3.41
7965 8821 1.957668 TCGATCAAGCCATGTCCATG 58.042 50.000 0.14 0.14 38.51 3.66
7966 8822 1.210234 TCGATCAAGCCATGTCCATGT 59.790 47.619 6.53 0.00 37.11 3.21
7967 8823 1.600957 CGATCAAGCCATGTCCATGTC 59.399 52.381 6.53 0.00 37.11 3.06
7968 8824 1.952296 GATCAAGCCATGTCCATGTCC 59.048 52.381 6.53 0.00 37.11 4.02
7994 8850 0.694771 TGCATGCTCCTCCTTCAACT 59.305 50.000 20.33 0.00 0.00 3.16
7995 8851 1.074405 TGCATGCTCCTCCTTCAACTT 59.926 47.619 20.33 0.00 0.00 2.66
7996 8852 1.742268 GCATGCTCCTCCTTCAACTTC 59.258 52.381 11.37 0.00 0.00 3.01
7998 8854 3.415212 CATGCTCCTCCTTCAACTTCAA 58.585 45.455 0.00 0.00 0.00 2.69
7999 8855 2.851195 TGCTCCTCCTTCAACTTCAAC 58.149 47.619 0.00 0.00 0.00 3.18
8001 8857 2.550180 GCTCCTCCTTCAACTTCAACAC 59.450 50.000 0.00 0.00 0.00 3.32
8002 8858 3.808728 CTCCTCCTTCAACTTCAACACA 58.191 45.455 0.00 0.00 0.00 3.72
8003 8859 3.541632 TCCTCCTTCAACTTCAACACAC 58.458 45.455 0.00 0.00 0.00 3.82
8004 8860 3.054728 TCCTCCTTCAACTTCAACACACA 60.055 43.478 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.803021 GCCATCACCAGAGAAGATGCTAG 60.803 52.174 0.00 0.00 38.21 3.42
35 36 2.103373 CTTCCATCCTCCAGTTCGAGA 58.897 52.381 0.00 0.00 30.97 4.04
37 38 1.195115 CCTTCCATCCTCCAGTTCGA 58.805 55.000 0.00 0.00 0.00 3.71
38 39 0.905357 ACCTTCCATCCTCCAGTTCG 59.095 55.000 0.00 0.00 0.00 3.95
40 41 2.065799 ACAACCTTCCATCCTCCAGTT 58.934 47.619 0.00 0.00 0.00 3.16
41 42 1.747444 ACAACCTTCCATCCTCCAGT 58.253 50.000 0.00 0.00 0.00 4.00
43 44 3.140144 AGAAAACAACCTTCCATCCTCCA 59.860 43.478 0.00 0.00 0.00 3.86
44 45 3.759086 GAGAAAACAACCTTCCATCCTCC 59.241 47.826 0.00 0.00 0.00 4.30
45 46 3.437049 CGAGAAAACAACCTTCCATCCTC 59.563 47.826 0.00 0.00 0.00 3.71
47 48 3.408634 TCGAGAAAACAACCTTCCATCC 58.591 45.455 0.00 0.00 0.00 3.51
48 49 4.320275 GGTTCGAGAAAACAACCTTCCATC 60.320 45.833 0.00 0.00 37.24 3.51
49 50 3.568430 GGTTCGAGAAAACAACCTTCCAT 59.432 43.478 0.00 0.00 37.24 3.41
50 51 2.946990 GGTTCGAGAAAACAACCTTCCA 59.053 45.455 0.00 0.00 37.24 3.53
51 52 2.032290 CGGTTCGAGAAAACAACCTTCC 60.032 50.000 0.00 0.00 37.95 3.46
53 54 2.635714 ACGGTTCGAGAAAACAACCTT 58.364 42.857 0.00 0.00 37.95 3.50
74 75 3.954904 TCCAATTCGTTGGGTGAGAAAAA 59.045 39.130 7.30 0.00 42.32 1.94
75 76 3.556999 TCCAATTCGTTGGGTGAGAAAA 58.443 40.909 7.30 0.00 42.32 2.29
80 81 2.940994 TTCTCCAATTCGTTGGGTGA 57.059 45.000 7.30 4.13 42.32 4.02
88 89 3.758554 ACAACCTTCCATTCTCCAATTCG 59.241 43.478 0.00 0.00 0.00 3.34
98 99 5.159273 ACACAAACAAACAACCTTCCATT 57.841 34.783 0.00 0.00 0.00 3.16
144 145 6.145535 GCAGTTCGAGAGACAAATCATTTTT 58.854 36.000 0.00 0.00 41.84 1.94
145 146 5.615544 CGCAGTTCGAGAGACAAATCATTTT 60.616 40.000 0.00 0.00 41.84 1.82
149 150 2.328473 CGCAGTTCGAGAGACAAATCA 58.672 47.619 0.00 0.00 41.84 2.57
155 156 1.515304 GAGGCGCAGTTCGAGAGAC 60.515 63.158 10.83 0.00 41.84 3.36
162 163 0.674895 ATGACTTGGAGGCGCAGTTC 60.675 55.000 10.83 3.16 0.00 3.01
166 167 0.955428 GTTCATGACTTGGAGGCGCA 60.955 55.000 10.83 0.00 0.00 6.09
196 197 4.916249 AGATCTCGACGTAAGAAACACAAC 59.084 41.667 4.40 0.00 43.62 3.32
200 201 4.216902 TGGAAGATCTCGACGTAAGAAACA 59.783 41.667 0.00 0.00 43.62 2.83
209 210 4.617808 TCTAGTTTGGAAGATCTCGACG 57.382 45.455 0.00 0.00 0.00 5.12
222 223 6.106673 ACCTGTTAACATCGGATCTAGTTTG 58.893 40.000 18.16 0.00 0.00 2.93
226 227 6.338146 TGAAACCTGTTAACATCGGATCTAG 58.662 40.000 18.16 0.59 0.00 2.43
266 269 7.587392 GGTTTTTGAAGCATAAGCACAAATTTC 59.413 33.333 13.08 8.55 43.22 2.17
301 322 6.127479 ACACTTTGGATAGTTTTGAAGCACAA 60.127 34.615 0.00 0.00 36.65 3.33
323 344 5.347364 TGCTTTAACAAAAAGTGAAGCACAC 59.653 36.000 12.35 6.03 46.45 3.82
324 345 5.473931 TGCTTTAACAAAAAGTGAAGCACA 58.526 33.333 12.35 0.00 46.45 4.57
327 348 4.026886 CCGTGCTTTAACAAAAAGTGAAGC 60.027 41.667 0.00 0.00 44.28 3.86
328 349 5.099575 ACCGTGCTTTAACAAAAAGTGAAG 58.900 37.500 0.02 0.00 0.00 3.02
329 350 5.061920 ACCGTGCTTTAACAAAAAGTGAA 57.938 34.783 0.02 0.00 0.00 3.18
330 351 4.705337 ACCGTGCTTTAACAAAAAGTGA 57.295 36.364 0.02 0.00 0.00 3.41
331 352 4.623595 ACAACCGTGCTTTAACAAAAAGTG 59.376 37.500 0.02 0.00 0.00 3.16
332 353 4.623595 CACAACCGTGCTTTAACAAAAAGT 59.376 37.500 0.02 0.00 36.06 2.66
333 354 5.124847 CACAACCGTGCTTTAACAAAAAG 57.875 39.130 0.00 0.00 36.06 2.27
360 381 0.180406 AAGTCCAGTTGCTTCCGTGT 59.820 50.000 0.00 0.00 0.00 4.49
363 384 0.868406 GTGAAGTCCAGTTGCTTCCG 59.132 55.000 0.00 0.00 40.07 4.30
364 385 2.262423 AGTGAAGTCCAGTTGCTTCC 57.738 50.000 0.00 0.00 40.07 3.46
415 438 9.594038 GCGTGTGAATTATAGTTGTATTTATGG 57.406 33.333 0.00 0.00 0.00 2.74
416 439 9.594038 GGCGTGTGAATTATAGTTGTATTTATG 57.406 33.333 0.00 0.00 0.00 1.90
418 441 8.951787 AGGCGTGTGAATTATAGTTGTATTTA 57.048 30.769 0.00 0.00 0.00 1.40
419 442 7.551262 TGAGGCGTGTGAATTATAGTTGTATTT 59.449 33.333 0.00 0.00 0.00 1.40
421 444 6.479001 GTGAGGCGTGTGAATTATAGTTGTAT 59.521 38.462 0.00 0.00 0.00 2.29
422 445 5.808540 GTGAGGCGTGTGAATTATAGTTGTA 59.191 40.000 0.00 0.00 0.00 2.41
423 446 4.630069 GTGAGGCGTGTGAATTATAGTTGT 59.370 41.667 0.00 0.00 0.00 3.32
425 448 5.086104 AGTGAGGCGTGTGAATTATAGTT 57.914 39.130 0.00 0.00 0.00 2.24
427 450 6.128282 ACAAAAGTGAGGCGTGTGAATTATAG 60.128 38.462 0.00 0.00 0.00 1.31
428 451 5.703592 ACAAAAGTGAGGCGTGTGAATTATA 59.296 36.000 0.00 0.00 0.00 0.98
429 452 4.518970 ACAAAAGTGAGGCGTGTGAATTAT 59.481 37.500 0.00 0.00 0.00 1.28
430 453 3.880490 ACAAAAGTGAGGCGTGTGAATTA 59.120 39.130 0.00 0.00 0.00 1.40
431 454 2.687935 ACAAAAGTGAGGCGTGTGAATT 59.312 40.909 0.00 0.00 0.00 2.17
432 455 2.297701 ACAAAAGTGAGGCGTGTGAAT 58.702 42.857 0.00 0.00 0.00 2.57
433 456 1.745232 ACAAAAGTGAGGCGTGTGAA 58.255 45.000 0.00 0.00 0.00 3.18
434 457 1.745232 AACAAAAGTGAGGCGTGTGA 58.255 45.000 0.00 0.00 0.00 3.58
435 458 2.559998 AAACAAAAGTGAGGCGTGTG 57.440 45.000 0.00 0.00 0.00 3.82
436 459 3.942748 TCTAAAACAAAAGTGAGGCGTGT 59.057 39.130 0.00 0.00 0.00 4.49
437 460 4.272504 TCTCTAAAACAAAAGTGAGGCGTG 59.727 41.667 0.00 0.00 0.00 5.34
438 461 4.448210 TCTCTAAAACAAAAGTGAGGCGT 58.552 39.130 0.00 0.00 0.00 5.68
439 462 5.418310 TTCTCTAAAACAAAAGTGAGGCG 57.582 39.130 0.00 0.00 0.00 5.52
465 488 0.318869 TGCATTTCCAAGCGCAGTTG 60.319 50.000 11.47 6.25 0.00 3.16
472 495 2.283351 GCATCGAATTGCATTTCCAAGC 59.717 45.455 14.10 7.81 42.31 4.01
475 498 2.101783 AGGCATCGAATTGCATTTCCA 58.898 42.857 12.73 3.74 44.59 3.53
482 505 0.307146 GAGCTCAGGCATCGAATTGC 59.693 55.000 9.40 2.28 41.70 3.56
490 513 0.464013 GTGCAGATGAGCTCAGGCAT 60.464 55.000 30.71 14.25 38.28 4.40
495 518 2.580815 CCGGTGCAGATGAGCTCA 59.419 61.111 20.79 20.79 34.99 4.26
497 520 3.005539 ACCCGGTGCAGATGAGCT 61.006 61.111 0.00 0.00 34.99 4.09
507 530 3.142951 TGAATTTACTGTTCACCCGGTG 58.857 45.455 11.73 11.73 31.07 4.94
549 581 6.322969 ACATCATGCATTGTAACATCTTCCAT 59.677 34.615 2.10 0.00 0.00 3.41
562 594 3.474693 TGACACGAACATCATGCATTG 57.525 42.857 0.00 0.00 0.00 2.82
568 600 9.345517 CAATCTAAAATTTGACACGAACATCAT 57.654 29.630 0.00 0.00 0.00 2.45
570 602 8.728088 ACAATCTAAAATTTGACACGAACATC 57.272 30.769 0.00 0.00 0.00 3.06
580 612 8.236586 CAGATGTCCGAACAATCTAAAATTTGA 58.763 33.333 0.00 0.00 39.30 2.69
588 620 5.679894 GCTTCTCAGATGTCCGAACAATCTA 60.680 44.000 0.00 0.00 39.30 1.98
591 623 3.055530 AGCTTCTCAGATGTCCGAACAAT 60.056 43.478 0.00 0.00 39.30 2.71
599 631 2.211806 GCCATGAGCTTCTCAGATGTC 58.788 52.381 0.00 0.00 44.08 3.06
606 638 4.510038 TTCTTTTTGCCATGAGCTTCTC 57.490 40.909 0.00 0.00 44.23 2.87
609 641 6.762333 ACTTTATTCTTTTTGCCATGAGCTT 58.238 32.000 0.00 0.00 44.23 3.74
694 726 7.173390 GTGGAGTTTAGACATTTCAGTAGCTTT 59.827 37.037 0.00 0.00 0.00 3.51
695 727 6.651225 GTGGAGTTTAGACATTTCAGTAGCTT 59.349 38.462 0.00 0.00 0.00 3.74
710 742 4.497473 TGCCAAATTTCGTGGAGTTTAG 57.503 40.909 0.00 0.00 38.54 1.85
711 743 4.321601 CCATGCCAAATTTCGTGGAGTTTA 60.322 41.667 11.11 0.00 40.86 2.01
717 749 1.545582 AGTCCATGCCAAATTTCGTGG 59.454 47.619 10.53 10.53 39.99 4.94
721 753 3.989817 GTGTGAAGTCCATGCCAAATTTC 59.010 43.478 0.00 0.00 0.00 2.17
729 761 2.153645 TCATGTGTGTGAAGTCCATGC 58.846 47.619 0.00 0.00 34.36 4.06
732 764 1.140652 TGCTCATGTGTGTGAAGTCCA 59.859 47.619 0.00 0.00 0.00 4.02
736 768 3.309138 GCTAGATGCTCATGTGTGTGAAG 59.691 47.826 0.00 0.00 38.95 3.02
741 773 4.895224 AAATGCTAGATGCTCATGTGTG 57.105 40.909 0.00 0.00 43.37 3.82
742 774 6.118170 AGTAAAATGCTAGATGCTCATGTGT 58.882 36.000 0.00 0.00 43.37 3.72
746 778 9.565090 TGAAATAGTAAAATGCTAGATGCTCAT 57.435 29.630 0.00 0.00 43.37 2.90
775 815 7.041644 CGTCCCTAAAACTGAACAGTAAATTCA 60.042 37.037 7.90 0.00 41.58 2.57
786 826 2.137523 GCGTTCGTCCCTAAAACTGAA 58.862 47.619 0.00 0.00 0.00 3.02
790 830 1.869132 AGTTGCGTTCGTCCCTAAAAC 59.131 47.619 0.00 0.00 0.00 2.43
951 1045 4.855388 CGATATAAAGGTAACCGTCCGATG 59.145 45.833 0.00 0.00 37.17 3.84
977 1071 2.164017 GGTTCTCGTTAGGTCTGAGTCC 59.836 54.545 0.00 0.00 0.00 3.85
1005 1099 2.511600 GGGAATGGCACGGTCGAG 60.512 66.667 0.00 0.00 0.00 4.04
1185 1279 3.812019 CGTGGACCGTCTCCTCCG 61.812 72.222 0.00 0.00 40.26 4.63
1449 1543 5.702209 GGTTAAGTTGAATGGTAAGTTCGGA 59.298 40.000 0.00 0.00 0.00 4.55
1490 1585 2.616842 GCTTTCACGGAGACCAGAAAAA 59.383 45.455 0.00 0.00 30.61 1.94
1491 1586 2.158813 AGCTTTCACGGAGACCAGAAAA 60.159 45.455 0.00 0.00 30.61 2.29
1549 1646 1.276138 TGTCCTCCTACACAGCACATG 59.724 52.381 0.00 0.00 0.00 3.21
1555 1652 7.554118 ACAAATTCAATATGTCCTCCTACACAG 59.446 37.037 0.00 0.00 30.75 3.66
1557 1654 7.679638 GCACAAATTCAATATGTCCTCCTACAC 60.680 40.741 0.00 0.00 30.75 2.90
1591 1689 3.679389 AGGAAAACATGTAGCCAGTCAG 58.321 45.455 0.00 0.00 0.00 3.51
1606 1704 6.293680 GCAAACACAAAAAGGAACAAGGAAAA 60.294 34.615 0.00 0.00 0.00 2.29
1654 1752 4.288105 ACATCTCTTCCTTCCAACAGATGT 59.712 41.667 6.56 6.56 43.55 3.06
1672 1770 1.276859 TGGCAGCTCCCATCACATCT 61.277 55.000 0.00 0.00 0.00 2.90
1741 1839 4.950050 ACGAGAAATGCAGGTTATAGAGG 58.050 43.478 0.00 0.00 0.00 3.69
1763 1861 0.904865 ACTCCTGTGCCATTCCTCGA 60.905 55.000 0.00 0.00 0.00 4.04
1831 1929 6.372659 ACAAATGTAGTAGCATGGTTTCTCTG 59.627 38.462 1.12 0.00 0.00 3.35
1839 1937 4.665212 CTGCAACAAATGTAGTAGCATGG 58.335 43.478 0.00 0.00 37.03 3.66
1889 1987 4.764172 ACTCATGATCAGAGTTTAGTGCC 58.236 43.478 17.11 0.00 43.47 5.01
1916 2014 5.438698 TGGCCCATTGAATTTTGATCATT 57.561 34.783 0.00 0.00 0.00 2.57
1922 2020 4.005487 TCAGTTGGCCCATTGAATTTTG 57.995 40.909 0.00 0.00 0.00 2.44
1926 2024 5.327732 CCTATATCAGTTGGCCCATTGAAT 58.672 41.667 6.10 4.68 0.00 2.57
1927 2025 4.728772 CCTATATCAGTTGGCCCATTGAA 58.271 43.478 6.10 0.00 0.00 2.69
1928 2026 3.498481 GCCTATATCAGTTGGCCCATTGA 60.498 47.826 4.40 4.40 39.49 2.57
1929 2027 2.821969 GCCTATATCAGTTGGCCCATTG 59.178 50.000 0.00 0.00 39.49 2.82
1988 2090 2.106566 ACAGCAAACAACCATGTCCAA 58.893 42.857 0.00 0.00 39.40 3.53
2034 2136 9.719355 AGAAGTACAAAAAGTTTCCACAAAAAT 57.281 25.926 0.00 0.00 0.00 1.82
2094 2198 5.465390 TCACTGTCGAAGTAATTTTGGACTG 59.535 40.000 9.06 9.06 36.83 3.51
2116 2220 5.019470 ACTATGGTGATCTGTTCAGTCTCA 58.981 41.667 0.00 2.63 34.17 3.27
2131 2235 6.981722 AGGCTTTCAAAAGTTAACTATGGTG 58.018 36.000 8.92 5.13 38.28 4.17
2140 2244 5.337578 AAGTGCAAGGCTTTCAAAAGTTA 57.662 34.783 0.00 0.00 38.28 2.24
2533 2637 6.930722 ACATGCACACGATGATGAATTATAGA 59.069 34.615 0.00 0.00 0.00 1.98
2555 2659 3.693085 GGTCATGCATGAACAGAAGACAT 59.307 43.478 34.56 0.00 43.87 3.06
2608 2712 7.949565 TGTGGCATATACATTCCTGGATTTAAT 59.050 33.333 0.00 0.00 0.00 1.40
2609 2713 7.293828 TGTGGCATATACATTCCTGGATTTAA 58.706 34.615 0.00 0.00 0.00 1.52
2611 2715 5.704354 TGTGGCATATACATTCCTGGATTT 58.296 37.500 0.00 0.00 0.00 2.17
2661 2767 9.095700 GGAGGGAGTACTTTAGATGAGATTAAT 57.904 37.037 0.00 0.00 0.00 1.40
2707 2813 5.775701 GGCCTCCTACTATCTAGACAAATCA 59.224 44.000 0.00 0.00 0.00 2.57
2798 2963 8.483307 ACAGATAATGCAAATTTCAAATGACC 57.517 30.769 0.00 0.00 0.00 4.02
2970 3158 6.894339 ACCGTTTCTCTTTCCAATTTATGT 57.106 33.333 0.00 0.00 0.00 2.29
3160 3358 3.236896 AGAGAAACCGAACACTCCCTTA 58.763 45.455 0.00 0.00 0.00 2.69
3161 3359 2.047830 AGAGAAACCGAACACTCCCTT 58.952 47.619 0.00 0.00 0.00 3.95
3162 3360 1.718280 AGAGAAACCGAACACTCCCT 58.282 50.000 0.00 0.00 0.00 4.20
3163 3361 2.414806 GAAGAGAAACCGAACACTCCC 58.585 52.381 0.00 0.00 0.00 4.30
3164 3362 2.059541 CGAAGAGAAACCGAACACTCC 58.940 52.381 0.00 0.00 0.00 3.85
3165 3363 1.456165 GCGAAGAGAAACCGAACACTC 59.544 52.381 0.00 0.00 0.00 3.51
3166 3364 1.068741 AGCGAAGAGAAACCGAACACT 59.931 47.619 0.00 0.00 0.00 3.55
3167 3365 1.456165 GAGCGAAGAGAAACCGAACAC 59.544 52.381 0.00 0.00 0.00 3.32
3168 3366 1.604693 GGAGCGAAGAGAAACCGAACA 60.605 52.381 0.00 0.00 0.00 3.18
3169 3367 1.069255 GGAGCGAAGAGAAACCGAAC 58.931 55.000 0.00 0.00 0.00 3.95
3170 3368 0.966920 AGGAGCGAAGAGAAACCGAA 59.033 50.000 0.00 0.00 0.00 4.30
3171 3369 0.526662 GAGGAGCGAAGAGAAACCGA 59.473 55.000 0.00 0.00 0.00 4.69
3172 3370 0.528470 AGAGGAGCGAAGAGAAACCG 59.472 55.000 0.00 0.00 0.00 4.44
3173 3371 3.193903 AGTTAGAGGAGCGAAGAGAAACC 59.806 47.826 0.00 0.00 0.00 3.27
3174 3372 4.417506 GAGTTAGAGGAGCGAAGAGAAAC 58.582 47.826 0.00 0.00 0.00 2.78
3175 3373 3.444388 GGAGTTAGAGGAGCGAAGAGAAA 59.556 47.826 0.00 0.00 0.00 2.52
3176 3374 3.018149 GGAGTTAGAGGAGCGAAGAGAA 58.982 50.000 0.00 0.00 0.00 2.87
3177 3375 2.645802 GGAGTTAGAGGAGCGAAGAGA 58.354 52.381 0.00 0.00 0.00 3.10
3178 3376 1.332375 CGGAGTTAGAGGAGCGAAGAG 59.668 57.143 0.00 0.00 0.00 2.85
3179 3377 1.380524 CGGAGTTAGAGGAGCGAAGA 58.619 55.000 0.00 0.00 0.00 2.87
3180 3378 0.248702 GCGGAGTTAGAGGAGCGAAG 60.249 60.000 0.00 0.00 0.00 3.79
3181 3379 0.680280 AGCGGAGTTAGAGGAGCGAA 60.680 55.000 0.00 0.00 0.00 4.70
3182 3380 1.077644 AGCGGAGTTAGAGGAGCGA 60.078 57.895 0.00 0.00 0.00 4.93
3183 3381 1.357334 GAGCGGAGTTAGAGGAGCG 59.643 63.158 0.00 0.00 0.00 5.03
3184 3382 1.737201 GGAGCGGAGTTAGAGGAGC 59.263 63.158 0.00 0.00 0.00 4.70
3185 3383 1.448922 CGGGAGCGGAGTTAGAGGAG 61.449 65.000 0.00 0.00 0.00 3.69
3186 3384 1.453379 CGGGAGCGGAGTTAGAGGA 60.453 63.158 0.00 0.00 0.00 3.71
3187 3385 2.491022 CCGGGAGCGGAGTTAGAGG 61.491 68.421 0.00 0.00 0.00 3.69
3188 3386 1.453379 TCCGGGAGCGGAGTTAGAG 60.453 63.158 0.00 0.00 33.62 2.43
3189 3387 2.679092 TCCGGGAGCGGAGTTAGA 59.321 61.111 0.00 0.00 33.62 2.10
3203 3401 1.220169 CTGCAATCTCATCCGCTCCG 61.220 60.000 0.00 0.00 0.00 4.63
3204 3402 1.505477 GCTGCAATCTCATCCGCTCC 61.505 60.000 0.00 0.00 0.00 4.70
3205 3403 0.532417 AGCTGCAATCTCATCCGCTC 60.532 55.000 1.02 0.00 0.00 5.03
3206 3404 0.532417 GAGCTGCAATCTCATCCGCT 60.532 55.000 1.02 1.26 0.00 5.52
3207 3405 0.812811 TGAGCTGCAATCTCATCCGC 60.813 55.000 12.72 0.00 35.81 5.54
3208 3406 0.935898 GTGAGCTGCAATCTCATCCG 59.064 55.000 17.91 0.00 41.93 4.18
3209 3407 2.328819 AGTGAGCTGCAATCTCATCC 57.671 50.000 17.91 8.99 41.93 3.51
3210 3408 3.688185 TCAAAGTGAGCTGCAATCTCATC 59.312 43.478 17.91 12.73 41.93 2.92
3211 3409 3.439476 GTCAAAGTGAGCTGCAATCTCAT 59.561 43.478 17.91 4.37 41.93 2.90
3212 3410 2.810274 GTCAAAGTGAGCTGCAATCTCA 59.190 45.455 12.72 12.72 38.16 3.27
3213 3411 2.159734 CGTCAAAGTGAGCTGCAATCTC 60.160 50.000 1.02 8.31 0.00 2.75
3214 3412 1.802960 CGTCAAAGTGAGCTGCAATCT 59.197 47.619 1.02 0.00 0.00 2.40
3215 3413 1.135859 CCGTCAAAGTGAGCTGCAATC 60.136 52.381 1.02 0.00 0.00 2.67
3216 3414 0.877071 CCGTCAAAGTGAGCTGCAAT 59.123 50.000 1.02 0.00 0.00 3.56
3217 3415 0.179059 TCCGTCAAAGTGAGCTGCAA 60.179 50.000 1.02 0.00 0.00 4.08
3218 3416 0.601046 CTCCGTCAAAGTGAGCTGCA 60.601 55.000 1.02 0.00 0.00 4.41
3219 3417 1.905922 GCTCCGTCAAAGTGAGCTGC 61.906 60.000 0.00 0.00 46.19 5.25
3220 3418 2.157421 GCTCCGTCAAAGTGAGCTG 58.843 57.895 0.00 0.00 46.19 4.24
3221 3419 4.683432 GCTCCGTCAAAGTGAGCT 57.317 55.556 3.61 0.00 46.19 4.09
3223 3421 1.269778 TGACAGCTCCGTCAAAGTGAG 60.270 52.381 4.49 0.00 42.82 3.51
3224 3422 0.750249 TGACAGCTCCGTCAAAGTGA 59.250 50.000 4.49 0.00 42.82 3.41
3225 3423 3.289128 TGACAGCTCCGTCAAAGTG 57.711 52.632 4.49 0.00 42.82 3.16
3230 3428 0.878523 CGGTTTTGACAGCTCCGTCA 60.879 55.000 2.87 2.87 44.05 4.35
3231 3429 0.599204 TCGGTTTTGACAGCTCCGTC 60.599 55.000 7.53 2.70 41.58 4.79
3232 3430 0.600255 CTCGGTTTTGACAGCTCCGT 60.600 55.000 7.53 0.00 41.58 4.69
3233 3431 1.901650 GCTCGGTTTTGACAGCTCCG 61.902 60.000 1.51 1.51 42.12 4.63
3234 3432 0.603975 AGCTCGGTTTTGACAGCTCC 60.604 55.000 0.00 0.00 37.72 4.70
3235 3433 2.919971 AGCTCGGTTTTGACAGCTC 58.080 52.632 0.00 0.00 37.72 4.09
3236 3434 0.603975 GGAGCTCGGTTTTGACAGCT 60.604 55.000 7.83 0.00 45.07 4.24
3237 3435 0.884704 TGGAGCTCGGTTTTGACAGC 60.885 55.000 7.83 0.00 0.00 4.40
3238 3436 0.868406 GTGGAGCTCGGTTTTGACAG 59.132 55.000 7.83 0.00 0.00 3.51
3239 3437 0.179234 TGTGGAGCTCGGTTTTGACA 59.821 50.000 7.83 0.00 0.00 3.58
3240 3438 1.002792 GTTGTGGAGCTCGGTTTTGAC 60.003 52.381 7.83 0.00 0.00 3.18
3241 3439 1.134220 AGTTGTGGAGCTCGGTTTTGA 60.134 47.619 7.83 0.00 0.00 2.69
3242 3440 1.264288 GAGTTGTGGAGCTCGGTTTTG 59.736 52.381 7.83 0.00 0.00 2.44
3243 3441 1.594331 GAGTTGTGGAGCTCGGTTTT 58.406 50.000 7.83 0.00 0.00 2.43
3244 3442 0.250338 GGAGTTGTGGAGCTCGGTTT 60.250 55.000 7.83 0.00 32.83 3.27
3245 3443 1.371558 GGAGTTGTGGAGCTCGGTT 59.628 57.895 7.83 0.00 32.83 4.44
3246 3444 2.932234 CGGAGTTGTGGAGCTCGGT 61.932 63.158 7.83 0.00 32.83 4.69
3247 3445 2.125912 CGGAGTTGTGGAGCTCGG 60.126 66.667 7.83 0.00 32.83 4.63
3248 3446 2.125912 CCGGAGTTGTGGAGCTCG 60.126 66.667 7.83 0.00 32.83 5.03
3249 3447 2.266055 CCCGGAGTTGTGGAGCTC 59.734 66.667 0.73 4.71 0.00 4.09
3250 3448 3.322466 CCCCGGAGTTGTGGAGCT 61.322 66.667 0.73 0.00 0.00 4.09
3251 3449 3.316573 CTCCCCGGAGTTGTGGAGC 62.317 68.421 0.73 0.00 38.12 4.70
3252 3450 2.982130 CTCCCCGGAGTTGTGGAG 59.018 66.667 0.73 5.22 38.56 3.86
3253 3451 3.319198 GCTCCCCGGAGTTGTGGA 61.319 66.667 0.73 0.00 43.70 4.02
3254 3452 4.760047 CGCTCCCCGGAGTTGTGG 62.760 72.222 0.73 0.00 43.70 4.17
3263 3461 1.592223 GGAATCTATCCGCTCCCCG 59.408 63.158 0.00 0.00 38.79 5.73
3271 3469 1.270893 GGCCCTGTTCGGAATCTATCC 60.271 57.143 0.00 0.00 45.57 2.59
3272 3470 1.694696 AGGCCCTGTTCGGAATCTATC 59.305 52.381 0.00 0.00 33.16 2.08
3273 3471 1.807814 AGGCCCTGTTCGGAATCTAT 58.192 50.000 0.00 0.00 33.16 1.98
3274 3472 2.464796 TAGGCCCTGTTCGGAATCTA 57.535 50.000 0.00 0.00 33.16 1.98
3275 3473 1.486726 CTTAGGCCCTGTTCGGAATCT 59.513 52.381 0.00 0.00 33.16 2.40
3276 3474 1.485066 TCTTAGGCCCTGTTCGGAATC 59.515 52.381 0.00 0.00 33.16 2.52
3277 3475 1.580059 TCTTAGGCCCTGTTCGGAAT 58.420 50.000 0.00 0.00 33.16 3.01
3278 3476 1.209504 CATCTTAGGCCCTGTTCGGAA 59.790 52.381 0.00 0.00 33.16 4.30
3279 3477 0.830648 CATCTTAGGCCCTGTTCGGA 59.169 55.000 0.00 0.00 33.16 4.55
3280 3478 0.815615 GCATCTTAGGCCCTGTTCGG 60.816 60.000 0.00 0.00 0.00 4.30
3281 3479 0.815615 GGCATCTTAGGCCCTGTTCG 60.816 60.000 0.00 0.00 45.87 3.95
3282 3480 3.102090 GGCATCTTAGGCCCTGTTC 57.898 57.895 0.00 0.00 45.87 3.18
3431 3629 4.058817 ACTTGTGTGCAGCTAGTTTAGTC 58.941 43.478 0.00 0.00 0.00 2.59
3511 3709 4.160329 TCTCTAAGGGAGTCTGCTTTTGA 58.840 43.478 0.00 0.00 42.40 2.69
3524 3722 7.119846 CCTGTTTGTGTTTTATCTCTCTAAGGG 59.880 40.741 0.00 0.00 0.00 3.95
3526 3724 8.499162 CACCTGTTTGTGTTTTATCTCTCTAAG 58.501 37.037 0.00 0.00 0.00 2.18
3549 3747 2.474410 ACTTTGGTACTAGCTGCACC 57.526 50.000 1.02 0.56 32.65 5.01
3558 3756 3.240302 ACCAGACTGCTACTTTGGTACT 58.760 45.455 0.00 0.00 40.21 2.73
3619 3817 8.166061 AGCATGGCTCCTCTCATAAAAATAATA 58.834 33.333 0.00 0.00 30.62 0.98
3623 3821 4.583489 CAGCATGGCTCCTCTCATAAAAAT 59.417 41.667 0.00 0.00 36.40 1.82
3624 3822 3.949754 CAGCATGGCTCCTCTCATAAAAA 59.050 43.478 0.00 0.00 36.40 1.94
3709 3907 7.141363 GCAAGAACAGATATTTGACACTTGTT 58.859 34.615 20.16 0.00 35.94 2.83
3719 3917 8.292448 CGCTTATATTGGCAAGAACAGATATTT 58.708 33.333 5.96 0.00 0.00 1.40
3744 3942 3.254470 TCACCACTCTCTCTCTCTACG 57.746 52.381 0.00 0.00 0.00 3.51
3999 4211 9.764363 CCTACTGTTATGATGCTCAACTAAATA 57.236 33.333 0.00 0.00 0.00 1.40
4070 4282 4.096003 CGGGGCCCTTCATCACGT 62.096 66.667 24.38 0.00 0.00 4.49
4095 4307 4.116961 CAAGTGCCATTATGCAAATCAGG 58.883 43.478 0.00 0.00 44.11 3.86
4183 4396 4.758688 TCAGCCTCTATACATTGTGTGTG 58.241 43.478 0.00 0.00 42.24 3.82
4193 4406 2.952116 AGGTGACCTCAGCCTCTATAC 58.048 52.381 0.00 0.00 44.82 1.47
4250 4464 7.836685 TGCAAAAACATCTTATATTAGGGGACA 59.163 33.333 0.00 0.00 0.00 4.02
4305 4519 4.631234 TGTACTCCCTCTGTCCCATAATT 58.369 43.478 0.00 0.00 0.00 1.40
4316 4530 4.211920 GCTGAGAAGTATGTACTCCCTCT 58.788 47.826 16.48 7.78 37.10 3.69
4428 4642 4.082571 CCAAAAACCTTAGCATCACCTCAG 60.083 45.833 0.00 0.00 0.00 3.35
4510 4725 1.878953 AGTGTTTGGCGTAGGTTCTG 58.121 50.000 0.00 0.00 0.00 3.02
4534 4749 2.156310 CGCGTTACAGTTAGGTCCAAAC 59.844 50.000 0.00 0.00 0.00 2.93
4535 4750 2.406130 CGCGTTACAGTTAGGTCCAAA 58.594 47.619 0.00 0.00 0.00 3.28
4575 4790 0.984230 ATGAGTTCCGCCTTCCAAGA 59.016 50.000 0.00 0.00 0.00 3.02
4590 4805 7.012704 CCTTGGACATAATCTTGTTGGTATGAG 59.987 40.741 0.00 0.00 0.00 2.90
4697 5385 2.092592 TCAGGCTCTGCAATGATCACAT 60.093 45.455 0.00 0.00 38.50 3.21
4704 5392 1.751927 GGGGTCAGGCTCTGCAATG 60.752 63.158 0.00 0.00 0.00 2.82
4853 5561 9.717942 ATATCAAGTGAGAATTATTAGACAGCC 57.282 33.333 0.00 0.00 0.00 4.85
5187 5898 4.232188 AGAGAGATGAATTGTGTGGCAT 57.768 40.909 0.00 0.00 0.00 4.40
5442 6165 5.694458 AGTTCGTTTCTGCTGTTTTTGTTTT 59.306 32.000 0.00 0.00 0.00 2.43
5878 6644 0.323816 ACGGGCAGACAGAGAGATCA 60.324 55.000 0.00 0.00 0.00 2.92
5893 6662 1.677052 GGTTAGCTGTAGAGAGACGGG 59.323 57.143 0.00 0.00 0.00 5.28
5895 6664 2.277969 TCGGTTAGCTGTAGAGAGACG 58.722 52.381 0.00 0.00 0.00 4.18
5908 6677 8.761497 CACCATTACATATGTAGTTTCGGTTAG 58.239 37.037 14.96 3.45 0.00 2.34
5913 6682 7.516785 GCAGACACCATTACATATGTAGTTTCG 60.517 40.741 14.96 8.43 0.00 3.46
5947 6716 7.254852 ACTCGTATTCTGTGAGAGAAATCTTC 58.745 38.462 0.00 0.00 44.11 2.87
6231 7007 5.051374 CGAGTCTTCAGAAAGAACTTGACAC 60.051 44.000 0.00 0.00 43.04 3.67
6255 7031 3.230743 GGTGCACATGAACCAAATACC 57.769 47.619 20.43 0.00 43.57 2.73
6396 7198 3.617669 CAGTGGACTGTAAAGCAAAACG 58.382 45.455 0.00 0.00 39.09 3.60
6498 7300 4.892934 AGAGGATAAGGAAGACTACTGCAG 59.107 45.833 13.48 13.48 0.00 4.41
6503 7305 5.221165 GCACAGAGAGGATAAGGAAGACTAC 60.221 48.000 0.00 0.00 0.00 2.73
6533 7335 6.591001 AGGTGGACAAAATAAAGCAAAATGT 58.409 32.000 0.00 0.00 0.00 2.71
6576 7380 6.033966 ACTTCTAAACAAAGCCAACGAAAAG 58.966 36.000 0.00 0.00 0.00 2.27
6590 7394 4.591498 TCCCAGCTCACTAACTTCTAAACA 59.409 41.667 0.00 0.00 0.00 2.83
6630 7434 6.224584 TCGACATTTATACAAGGTGACAACA 58.775 36.000 0.00 0.00 0.00 3.33
6669 7473 7.165485 AGCCATACACACAATTAACTCACTTA 58.835 34.615 0.00 0.00 0.00 2.24
6693 7497 3.077359 CCTGCCAAGTCCAAAACTCTAG 58.923 50.000 0.00 0.00 37.17 2.43
6767 7572 5.768164 TGGAGGGTTCTTAAAACAGAATGAC 59.232 40.000 0.00 0.00 39.69 3.06
6925 7730 1.210478 TGGCCCTCTAGAATCTTGCAC 59.790 52.381 0.00 0.00 0.00 4.57
6952 7757 1.751349 AAAGGCTGCTTGGTTGGCTG 61.751 55.000 0.00 0.00 36.71 4.85
6953 7758 1.458209 AAAGGCTGCTTGGTTGGCT 60.458 52.632 0.00 0.00 38.25 4.75
6954 7759 1.301165 CAAAGGCTGCTTGGTTGGC 60.301 57.895 0.00 0.00 0.00 4.52
6955 7760 0.316204 CTCAAAGGCTGCTTGGTTGG 59.684 55.000 0.00 0.00 0.00 3.77
6956 7761 1.035139 ACTCAAAGGCTGCTTGGTTG 58.965 50.000 0.00 0.00 0.00 3.77
6957 7762 1.035139 CACTCAAAGGCTGCTTGGTT 58.965 50.000 0.00 0.00 0.00 3.67
6958 7763 0.825010 CCACTCAAAGGCTGCTTGGT 60.825 55.000 0.00 0.00 0.00 3.67
6959 7764 0.825010 ACCACTCAAAGGCTGCTTGG 60.825 55.000 0.00 0.00 34.39 3.61
6960 7765 0.595095 GACCACTCAAAGGCTGCTTG 59.405 55.000 0.00 0.00 0.00 4.01
6961 7766 0.475906 AGACCACTCAAAGGCTGCTT 59.524 50.000 0.00 0.00 0.00 3.91
6962 7767 0.250640 CAGACCACTCAAAGGCTGCT 60.251 55.000 0.00 0.00 0.00 4.24
6963 7768 0.536006 ACAGACCACTCAAAGGCTGC 60.536 55.000 0.00 0.00 35.24 5.25
7002 7807 6.736110 AAAGGCATGGTATCAATGCTTAAT 57.264 33.333 8.67 0.00 40.82 1.40
7025 7830 5.120674 CGCAGAGACATCATAAAACACTCAA 59.879 40.000 0.00 0.00 0.00 3.02
7150 7956 4.658063 ACGTAAATCCATTCCACAGGAAA 58.342 39.130 2.16 0.00 45.41 3.13
7151 7957 4.295141 ACGTAAATCCATTCCACAGGAA 57.705 40.909 0.30 0.30 46.39 3.36
7152 7958 3.992943 ACGTAAATCCATTCCACAGGA 57.007 42.857 0.00 0.00 38.50 3.86
7153 7959 4.766375 AGTACGTAAATCCATTCCACAGG 58.234 43.478 0.00 0.00 0.00 4.00
7154 7960 5.462398 GCTAGTACGTAAATCCATTCCACAG 59.538 44.000 0.00 0.00 0.00 3.66
7155 7961 5.105269 TGCTAGTACGTAAATCCATTCCACA 60.105 40.000 0.00 0.00 0.00 4.17
7156 7962 5.353938 TGCTAGTACGTAAATCCATTCCAC 58.646 41.667 0.00 0.00 0.00 4.02
7157 7963 5.601583 TGCTAGTACGTAAATCCATTCCA 57.398 39.130 0.00 0.00 0.00 3.53
7158 7964 8.656849 CATTATGCTAGTACGTAAATCCATTCC 58.343 37.037 0.00 0.00 0.00 3.01
7159 7965 8.169268 GCATTATGCTAGTACGTAAATCCATTC 58.831 37.037 10.27 0.00 40.96 2.67
7160 7966 7.148639 CGCATTATGCTAGTACGTAAATCCATT 60.149 37.037 15.54 0.00 42.25 3.16
7161 7967 6.310467 CGCATTATGCTAGTACGTAAATCCAT 59.690 38.462 15.54 1.29 42.25 3.41
7162 7968 5.631929 CGCATTATGCTAGTACGTAAATCCA 59.368 40.000 15.54 0.00 42.25 3.41
7163 7969 5.632347 ACGCATTATGCTAGTACGTAAATCC 59.368 40.000 15.54 0.00 42.25 3.01
7164 7970 6.686130 ACGCATTATGCTAGTACGTAAATC 57.314 37.500 15.54 0.00 42.25 2.17
7165 7971 6.698329 TCAACGCATTATGCTAGTACGTAAAT 59.302 34.615 15.54 0.00 42.25 1.40
7179 8001 7.087409 TGTTTCTCAATCATCAACGCATTAT 57.913 32.000 0.00 0.00 0.00 1.28
7186 8008 7.642669 TGACTCTTTGTTTCTCAATCATCAAC 58.357 34.615 0.00 0.00 35.84 3.18
7357 8198 6.500684 ACATTATCATGTCAACAACCAGAC 57.499 37.500 0.00 0.00 39.69 3.51
7360 8201 7.523293 AAGAACATTATCATGTCAACAACCA 57.477 32.000 0.00 0.00 43.34 3.67
7361 8202 9.341899 GTTAAGAACATTATCATGTCAACAACC 57.658 33.333 0.00 0.00 43.34 3.77
7364 8205 9.283768 ACAGTTAAGAACATTATCATGTCAACA 57.716 29.630 0.00 0.00 43.34 3.33
7426 8274 9.549078 ACGAAAATAATCCTAGGATTCTTCTTC 57.451 33.333 35.17 28.46 43.04 2.87
7468 8324 3.775661 ACTACACTTTGCAAACACACC 57.224 42.857 8.05 0.00 0.00 4.16
7469 8325 5.479716 ACTACTACACTTTGCAAACACAC 57.520 39.130 8.05 0.00 0.00 3.82
7498 8354 9.487442 AGGAACACTACTACTACTACTACTACT 57.513 37.037 0.00 0.00 0.00 2.57
7515 8371 3.054139 TCGGCTAGGAAGTAGGAACACTA 60.054 47.826 0.00 0.00 0.00 2.74
7516 8372 2.100989 CGGCTAGGAAGTAGGAACACT 58.899 52.381 0.00 0.00 0.00 3.55
7517 8373 2.097825 TCGGCTAGGAAGTAGGAACAC 58.902 52.381 0.00 0.00 0.00 3.32
7518 8374 2.291411 ACTCGGCTAGGAAGTAGGAACA 60.291 50.000 0.00 0.00 0.00 3.18
7519 8375 2.099427 CACTCGGCTAGGAAGTAGGAAC 59.901 54.545 0.00 0.00 0.00 3.62
7520 8376 2.376109 CACTCGGCTAGGAAGTAGGAA 58.624 52.381 0.00 0.00 0.00 3.36
7521 8377 1.409802 CCACTCGGCTAGGAAGTAGGA 60.410 57.143 0.00 0.00 0.00 2.94
7522 8378 1.033574 CCACTCGGCTAGGAAGTAGG 58.966 60.000 0.00 0.00 0.00 3.18
7523 8379 1.765230 ACCACTCGGCTAGGAAGTAG 58.235 55.000 0.00 0.00 34.57 2.57
7524 8380 1.822990 CAACCACTCGGCTAGGAAGTA 59.177 52.381 0.00 0.00 34.57 2.24
7525 8381 0.608640 CAACCACTCGGCTAGGAAGT 59.391 55.000 0.00 0.00 34.57 3.01
7526 8382 0.108138 CCAACCACTCGGCTAGGAAG 60.108 60.000 0.00 0.00 34.57 3.46
7554 8410 1.302431 CAAGACCATGTGGCGACCA 60.302 57.895 0.00 0.00 39.32 4.02
7682 8538 0.399833 GCCAGAGGGGAAGATGATCC 59.600 60.000 0.00 0.00 40.01 3.36
7994 8850 4.159506 CCTTTCCTTTCCTTGTGTGTTGAA 59.840 41.667 0.00 0.00 0.00 2.69
7995 8851 3.699038 CCTTTCCTTTCCTTGTGTGTTGA 59.301 43.478 0.00 0.00 0.00 3.18
7996 8852 4.045636 CCTTTCCTTTCCTTGTGTGTTG 57.954 45.455 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.