Multiple sequence alignment - TraesCS5B01G118800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G118800 chr5B 100.000 4293 0 0 1 4293 209292660 209288368 0.000000e+00 7928.0
1 TraesCS5B01G118800 chr5B 95.000 320 13 3 1 320 119118433 119118117 2.310000e-137 499.0
2 TraesCS5B01G118800 chr5D 96.968 2935 71 11 882 3802 202396163 202399093 0.000000e+00 4911.0
3 TraesCS5B01G118800 chr5D 97.787 497 8 2 3800 4293 202399722 202400218 0.000000e+00 854.0
4 TraesCS5B01G118800 chr5D 89.474 323 27 4 322 638 202395833 202396154 6.690000e-108 401.0
5 TraesCS5B01G118800 chr5A 94.314 1196 37 5 872 2036 224387805 224389000 0.000000e+00 1803.0
6 TraesCS5B01G118800 chr5A 93.456 871 47 5 2029 2897 224404772 224405634 0.000000e+00 1284.0
7 TraesCS5B01G118800 chr5A 91.880 468 24 6 3343 3802 224410258 224410719 3.620000e-180 641.0
8 TraesCS5B01G118800 chr5A 93.583 374 23 1 2937 3310 224409886 224410258 1.350000e-154 556.0
9 TraesCS5B01G118800 chr5A 85.714 483 41 14 3800 4273 224411075 224411538 6.450000e-133 484.0
10 TraesCS5B01G118800 chr5A 87.662 308 33 3 334 638 224387499 224387804 1.900000e-93 353.0
11 TraesCS5B01G118800 chr2D 96.584 322 11 0 1 322 11019019 11018698 6.320000e-148 534.0
12 TraesCS5B01G118800 chr3A 95.652 322 14 0 1 322 463110998 463110677 6.360000e-143 518.0
13 TraesCS5B01G118800 chr3A 95.652 322 14 0 1 322 729768241 729767920 6.360000e-143 518.0
14 TraesCS5B01G118800 chr1D 95.652 322 14 0 1 322 460904846 460905167 6.360000e-143 518.0
15 TraesCS5B01G118800 chr1D 89.286 84 9 0 3175 3258 352546441 352546358 5.870000e-19 106.0
16 TraesCS5B01G118800 chr4D 95.046 323 15 1 1 322 353924129 353923807 1.380000e-139 507.0
17 TraesCS5B01G118800 chr2A 95.031 322 16 0 1 322 554074014 554074335 1.380000e-139 507.0
18 TraesCS5B01G118800 chr1B 94.720 322 17 0 1 322 590642557 590642878 6.410000e-138 501.0
19 TraesCS5B01G118800 chr1B 82.143 112 20 0 3172 3283 474758156 474758267 3.530000e-16 97.1
20 TraesCS5B01G118800 chr7D 94.099 322 19 0 1 322 550857842 550858163 1.390000e-134 490.0
21 TraesCS5B01G118800 chr4B 91.071 112 4 1 1303 1408 669915265 669915376 3.460000e-31 147.0
22 TraesCS5B01G118800 chr4B 90.741 108 8 1 1303 1408 669913601 669913708 4.470000e-30 143.0
23 TraesCS5B01G118800 chr7A 78.325 203 38 5 3164 3365 170901211 170901014 4.510000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G118800 chr5B 209288368 209292660 4292 True 7928.000000 7928 100.000000 1 4293 1 chr5B.!!$R2 4292
1 TraesCS5B01G118800 chr5D 202395833 202400218 4385 False 2055.333333 4911 94.743000 322 4293 3 chr5D.!!$F1 3971
2 TraesCS5B01G118800 chr5A 224404772 224405634 862 False 1284.000000 1284 93.456000 2029 2897 1 chr5A.!!$F1 868
3 TraesCS5B01G118800 chr5A 224387499 224389000 1501 False 1078.000000 1803 90.988000 334 2036 2 chr5A.!!$F2 1702
4 TraesCS5B01G118800 chr5A 224409886 224411538 1652 False 560.333333 641 90.392333 2937 4273 3 chr5A.!!$F3 1336

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
850 857 0.035915 GGCCACTCTTTCTCACTCCC 60.036 60.0 0.0 0.0 0.0 4.30 F
1245 1252 0.179006 GACTGATGATCCTTGCCCCC 60.179 60.0 0.0 0.0 0.0 5.40 F
2080 2117 0.678395 AGCTGCTATGATGTCTCCCG 59.322 55.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1821 1858 0.520404 GCACATGAGAGCACACCAAG 59.480 55.0 0.0 0.0 0.00 3.61 R
2233 2270 1.141185 GGTCCCCTCCTATTTCCCAG 58.859 60.0 0.0 0.0 0.00 4.45 R
3962 4650 0.908198 GGGATCTGCCTCTGTCAAGT 59.092 55.0 0.0 0.0 36.66 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.172868 TCATGCTCCATGAAAATAATTGTGT 57.827 32.000 5.49 0.00 46.17 3.72
25 26 7.259882 TCATGCTCCATGAAAATAATTGTGTC 58.740 34.615 5.49 0.00 46.17 3.67
26 27 6.587206 TGCTCCATGAAAATAATTGTGTCA 57.413 33.333 0.00 0.00 0.00 3.58
27 28 7.172868 TGCTCCATGAAAATAATTGTGTCAT 57.827 32.000 0.00 0.00 0.00 3.06
28 29 7.259882 TGCTCCATGAAAATAATTGTGTCATC 58.740 34.615 0.00 0.00 0.00 2.92
29 30 7.123098 TGCTCCATGAAAATAATTGTGTCATCT 59.877 33.333 0.00 0.00 0.00 2.90
30 31 7.434307 GCTCCATGAAAATAATTGTGTCATCTG 59.566 37.037 0.00 0.00 0.00 2.90
31 32 7.259882 TCCATGAAAATAATTGTGTCATCTGC 58.740 34.615 0.00 0.00 0.00 4.26
32 33 6.197655 CCATGAAAATAATTGTGTCATCTGCG 59.802 38.462 0.00 0.00 0.00 5.18
33 34 6.252967 TGAAAATAATTGTGTCATCTGCGT 57.747 33.333 0.00 0.00 0.00 5.24
34 35 7.371126 TGAAAATAATTGTGTCATCTGCGTA 57.629 32.000 0.00 0.00 0.00 4.42
35 36 7.984391 TGAAAATAATTGTGTCATCTGCGTAT 58.016 30.769 0.00 0.00 0.00 3.06
36 37 8.458052 TGAAAATAATTGTGTCATCTGCGTATT 58.542 29.630 0.00 0.00 0.00 1.89
37 38 8.619146 AAAATAATTGTGTCATCTGCGTATTG 57.381 30.769 0.00 0.00 0.00 1.90
38 39 6.925610 ATAATTGTGTCATCTGCGTATTGT 57.074 33.333 0.00 0.00 0.00 2.71
39 40 8.432110 AATAATTGTGTCATCTGCGTATTGTA 57.568 30.769 0.00 0.00 0.00 2.41
40 41 5.973651 ATTGTGTCATCTGCGTATTGTAG 57.026 39.130 0.00 0.00 0.00 2.74
41 42 3.780902 TGTGTCATCTGCGTATTGTAGG 58.219 45.455 0.00 0.00 0.00 3.18
42 43 3.445805 TGTGTCATCTGCGTATTGTAGGA 59.554 43.478 0.00 0.00 0.00 2.94
43 44 4.099419 TGTGTCATCTGCGTATTGTAGGAT 59.901 41.667 0.00 0.00 0.00 3.24
44 45 5.300792 TGTGTCATCTGCGTATTGTAGGATA 59.699 40.000 0.00 0.00 0.00 2.59
45 46 5.859114 GTGTCATCTGCGTATTGTAGGATAG 59.141 44.000 0.00 0.00 0.00 2.08
46 47 5.768164 TGTCATCTGCGTATTGTAGGATAGA 59.232 40.000 0.00 0.00 0.00 1.98
47 48 6.434340 TGTCATCTGCGTATTGTAGGATAGAT 59.566 38.462 0.00 0.00 0.00 1.98
48 49 7.610305 TGTCATCTGCGTATTGTAGGATAGATA 59.390 37.037 0.00 0.00 0.00 1.98
49 50 7.911205 GTCATCTGCGTATTGTAGGATAGATAC 59.089 40.741 0.00 0.00 0.00 2.24
50 51 6.754702 TCTGCGTATTGTAGGATAGATACC 57.245 41.667 0.00 0.00 0.00 2.73
51 52 5.651139 TCTGCGTATTGTAGGATAGATACCC 59.349 44.000 0.00 0.00 0.00 3.69
52 53 4.708421 TGCGTATTGTAGGATAGATACCCC 59.292 45.833 0.00 0.00 0.00 4.95
53 54 4.708421 GCGTATTGTAGGATAGATACCCCA 59.292 45.833 0.00 0.00 0.00 4.96
54 55 5.393896 GCGTATTGTAGGATAGATACCCCAC 60.394 48.000 0.00 0.00 0.00 4.61
55 56 5.126707 CGTATTGTAGGATAGATACCCCACC 59.873 48.000 0.00 0.00 0.00 4.61
56 57 4.562934 TTGTAGGATAGATACCCCACCA 57.437 45.455 0.00 0.00 0.00 4.17
57 58 4.777877 TGTAGGATAGATACCCCACCAT 57.222 45.455 0.00 0.00 0.00 3.55
58 59 4.684724 TGTAGGATAGATACCCCACCATC 58.315 47.826 0.00 0.00 0.00 3.51
59 60 3.207044 AGGATAGATACCCCACCATCC 57.793 52.381 0.00 0.00 33.58 3.51
60 61 2.458706 AGGATAGATACCCCACCATCCA 59.541 50.000 0.00 0.00 35.44 3.41
61 62 3.081243 AGGATAGATACCCCACCATCCAT 59.919 47.826 0.00 0.00 35.44 3.41
62 63 3.852578 GGATAGATACCCCACCATCCATT 59.147 47.826 0.00 0.00 33.60 3.16
63 64 5.036916 GGATAGATACCCCACCATCCATTA 58.963 45.833 0.00 0.00 33.60 1.90
64 65 5.672194 GGATAGATACCCCACCATCCATTAT 59.328 44.000 0.00 0.00 33.60 1.28
65 66 6.849697 GGATAGATACCCCACCATCCATTATA 59.150 42.308 0.00 0.00 33.60 0.98
66 67 7.517604 GGATAGATACCCCACCATCCATTATAT 59.482 40.741 0.00 0.00 33.60 0.86
67 68 6.581388 AGATACCCCACCATCCATTATATG 57.419 41.667 0.00 0.00 0.00 1.78
68 69 6.038609 AGATACCCCACCATCCATTATATGT 58.961 40.000 0.00 0.00 0.00 2.29
69 70 4.387026 ACCCCACCATCCATTATATGTG 57.613 45.455 0.00 0.00 0.00 3.21
70 71 3.075882 ACCCCACCATCCATTATATGTGG 59.924 47.826 0.00 0.00 38.52 4.17
71 72 3.700538 CCCACCATCCATTATATGTGGG 58.299 50.000 10.81 10.81 45.93 4.61
72 73 4.656100 CCACCATCCATTATATGTGGGA 57.344 45.455 8.58 2.20 36.61 4.37
73 74 5.197224 CCACCATCCATTATATGTGGGAT 57.803 43.478 8.58 4.20 40.71 3.85
74 75 6.325993 CCACCATCCATTATATGTGGGATA 57.674 41.667 8.58 0.00 38.05 2.59
75 76 6.730447 CCACCATCCATTATATGTGGGATAA 58.270 40.000 8.58 0.00 38.05 1.75
76 77 6.830324 CCACCATCCATTATATGTGGGATAAG 59.170 42.308 8.58 4.87 38.05 1.73
77 78 7.311865 CCACCATCCATTATATGTGGGATAAGA 60.312 40.741 8.58 0.00 38.05 2.10
78 79 7.554118 CACCATCCATTATATGTGGGATAAGAC 59.446 40.741 8.58 0.00 38.05 3.01
79 80 7.056635 CCATCCATTATATGTGGGATAAGACC 58.943 42.308 8.58 0.00 38.05 3.85
80 81 7.311865 CCATCCATTATATGTGGGATAAGACCA 60.312 40.741 8.58 0.00 38.05 4.02
88 89 2.759355 TGGGATAAGACCACCTACCTG 58.241 52.381 0.00 0.00 31.83 4.00
89 90 2.316677 TGGGATAAGACCACCTACCTGA 59.683 50.000 0.00 0.00 31.83 3.86
90 91 2.699321 GGGATAAGACCACCTACCTGAC 59.301 54.545 0.00 0.00 0.00 3.51
91 92 2.699321 GGATAAGACCACCTACCTGACC 59.301 54.545 0.00 0.00 0.00 4.02
92 93 3.371965 GATAAGACCACCTACCTGACCA 58.628 50.000 0.00 0.00 0.00 4.02
93 94 2.344093 AAGACCACCTACCTGACCAT 57.656 50.000 0.00 0.00 0.00 3.55
94 95 1.867363 AGACCACCTACCTGACCATC 58.133 55.000 0.00 0.00 0.00 3.51
95 96 1.362932 AGACCACCTACCTGACCATCT 59.637 52.381 0.00 0.00 0.00 2.90
96 97 2.188817 GACCACCTACCTGACCATCTT 58.811 52.381 0.00 0.00 0.00 2.40
97 98 1.909302 ACCACCTACCTGACCATCTTG 59.091 52.381 0.00 0.00 0.00 3.02
98 99 1.909302 CCACCTACCTGACCATCTTGT 59.091 52.381 0.00 0.00 0.00 3.16
99 100 2.305927 CCACCTACCTGACCATCTTGTT 59.694 50.000 0.00 0.00 0.00 2.83
100 101 3.244911 CCACCTACCTGACCATCTTGTTT 60.245 47.826 0.00 0.00 0.00 2.83
101 102 4.003648 CACCTACCTGACCATCTTGTTTC 58.996 47.826 0.00 0.00 0.00 2.78
102 103 3.262420 CCTACCTGACCATCTTGTTTCG 58.738 50.000 0.00 0.00 0.00 3.46
103 104 1.523758 ACCTGACCATCTTGTTTCGC 58.476 50.000 0.00 0.00 0.00 4.70
104 105 1.072331 ACCTGACCATCTTGTTTCGCT 59.928 47.619 0.00 0.00 0.00 4.93
105 106 1.734465 CCTGACCATCTTGTTTCGCTC 59.266 52.381 0.00 0.00 0.00 5.03
106 107 2.613977 CCTGACCATCTTGTTTCGCTCT 60.614 50.000 0.00 0.00 0.00 4.09
107 108 3.368427 CCTGACCATCTTGTTTCGCTCTA 60.368 47.826 0.00 0.00 0.00 2.43
108 109 4.437239 CTGACCATCTTGTTTCGCTCTAT 58.563 43.478 0.00 0.00 0.00 1.98
109 110 4.832248 TGACCATCTTGTTTCGCTCTATT 58.168 39.130 0.00 0.00 0.00 1.73
110 111 5.972935 TGACCATCTTGTTTCGCTCTATTA 58.027 37.500 0.00 0.00 0.00 0.98
111 112 6.403049 TGACCATCTTGTTTCGCTCTATTAA 58.597 36.000 0.00 0.00 0.00 1.40
112 113 6.312918 TGACCATCTTGTTTCGCTCTATTAAC 59.687 38.462 0.00 0.00 0.00 2.01
113 114 6.170506 ACCATCTTGTTTCGCTCTATTAACA 58.829 36.000 0.00 0.00 0.00 2.41
114 115 6.653320 ACCATCTTGTTTCGCTCTATTAACAA 59.347 34.615 0.00 0.00 37.95 2.83
117 118 5.927030 CTTGTTTCGCTCTATTAACAAGCA 58.073 37.500 12.00 0.00 45.76 3.91
118 119 5.277601 TGTTTCGCTCTATTAACAAGCAC 57.722 39.130 6.43 0.00 35.76 4.40
119 120 4.143200 TGTTTCGCTCTATTAACAAGCACG 60.143 41.667 6.43 0.00 35.76 5.34
120 121 2.536365 TCGCTCTATTAACAAGCACGG 58.464 47.619 6.43 0.00 35.76 4.94
121 122 2.094390 TCGCTCTATTAACAAGCACGGT 60.094 45.455 6.43 0.00 35.76 4.83
122 123 2.281762 CGCTCTATTAACAAGCACGGTC 59.718 50.000 6.43 0.00 35.76 4.79
123 124 3.259064 GCTCTATTAACAAGCACGGTCA 58.741 45.455 0.00 0.00 36.06 4.02
124 125 3.682858 GCTCTATTAACAAGCACGGTCAA 59.317 43.478 0.00 0.00 36.06 3.18
125 126 4.435651 GCTCTATTAACAAGCACGGTCAAC 60.436 45.833 0.00 0.00 36.06 3.18
126 127 4.633175 TCTATTAACAAGCACGGTCAACA 58.367 39.130 0.00 0.00 0.00 3.33
127 128 5.242434 TCTATTAACAAGCACGGTCAACAT 58.758 37.500 0.00 0.00 0.00 2.71
128 129 6.399743 TCTATTAACAAGCACGGTCAACATA 58.600 36.000 0.00 0.00 0.00 2.29
129 130 7.045416 TCTATTAACAAGCACGGTCAACATAT 58.955 34.615 0.00 0.00 0.00 1.78
130 131 5.539582 TTAACAAGCACGGTCAACATATC 57.460 39.130 0.00 0.00 0.00 1.63
131 132 3.052455 ACAAGCACGGTCAACATATCA 57.948 42.857 0.00 0.00 0.00 2.15
132 133 3.407698 ACAAGCACGGTCAACATATCAA 58.592 40.909 0.00 0.00 0.00 2.57
133 134 3.188460 ACAAGCACGGTCAACATATCAAC 59.812 43.478 0.00 0.00 0.00 3.18
134 135 2.356135 AGCACGGTCAACATATCAACC 58.644 47.619 0.00 0.00 0.00 3.77
135 136 2.080693 GCACGGTCAACATATCAACCA 58.919 47.619 0.00 0.00 0.00 3.67
136 137 2.159572 GCACGGTCAACATATCAACCAC 60.160 50.000 0.00 0.00 0.00 4.16
137 138 3.070748 CACGGTCAACATATCAACCACA 58.929 45.455 0.00 0.00 0.00 4.17
138 139 3.500299 CACGGTCAACATATCAACCACAA 59.500 43.478 0.00 0.00 0.00 3.33
139 140 4.155826 CACGGTCAACATATCAACCACAAT 59.844 41.667 0.00 0.00 0.00 2.71
140 141 5.352846 CACGGTCAACATATCAACCACAATA 59.647 40.000 0.00 0.00 0.00 1.90
141 142 6.038161 CACGGTCAACATATCAACCACAATAT 59.962 38.462 0.00 0.00 0.00 1.28
142 143 6.601613 ACGGTCAACATATCAACCACAATATT 59.398 34.615 0.00 0.00 0.00 1.28
143 144 7.771361 ACGGTCAACATATCAACCACAATATTA 59.229 33.333 0.00 0.00 0.00 0.98
144 145 8.616942 CGGTCAACATATCAACCACAATATTAA 58.383 33.333 0.00 0.00 0.00 1.40
154 155 7.767261 TCAACCACAATATTAAAAAGGATCGG 58.233 34.615 0.00 0.00 0.00 4.18
155 156 7.394923 TCAACCACAATATTAAAAAGGATCGGT 59.605 33.333 0.00 0.00 0.00 4.69
156 157 7.095695 ACCACAATATTAAAAAGGATCGGTG 57.904 36.000 0.00 0.00 0.00 4.94
157 158 6.887545 ACCACAATATTAAAAAGGATCGGTGA 59.112 34.615 0.00 0.00 0.00 4.02
158 159 7.148137 ACCACAATATTAAAAAGGATCGGTGAC 60.148 37.037 0.00 0.00 0.00 3.67
159 160 7.148154 CCACAATATTAAAAAGGATCGGTGACA 60.148 37.037 0.00 0.00 0.00 3.58
160 161 8.405531 CACAATATTAAAAAGGATCGGTGACAT 58.594 33.333 0.00 0.00 0.00 3.06
161 162 8.405531 ACAATATTAAAAAGGATCGGTGACATG 58.594 33.333 0.00 0.00 0.00 3.21
162 163 5.835113 ATTAAAAAGGATCGGTGACATGG 57.165 39.130 0.00 0.00 0.00 3.66
163 164 2.128771 AAAAGGATCGGTGACATGGG 57.871 50.000 0.00 0.00 0.00 4.00
164 165 1.285280 AAAGGATCGGTGACATGGGA 58.715 50.000 0.00 0.00 0.00 4.37
165 166 1.511613 AAGGATCGGTGACATGGGAT 58.488 50.000 0.00 0.00 0.00 3.85
166 167 1.051812 AGGATCGGTGACATGGGATC 58.948 55.000 0.00 1.46 35.65 3.36
167 168 0.758734 GGATCGGTGACATGGGATCA 59.241 55.000 0.00 0.00 37.59 2.92
168 169 1.541233 GGATCGGTGACATGGGATCAC 60.541 57.143 6.42 6.42 44.80 3.06
183 184 4.779993 GGATCACCCTGTCTTAATCCTT 57.220 45.455 0.00 0.00 31.87 3.36
184 185 5.117406 GGATCACCCTGTCTTAATCCTTT 57.883 43.478 0.00 0.00 31.87 3.11
185 186 6.248569 GGATCACCCTGTCTTAATCCTTTA 57.751 41.667 0.00 0.00 31.87 1.85
186 187 6.659824 GGATCACCCTGTCTTAATCCTTTAA 58.340 40.000 0.00 0.00 31.87 1.52
187 188 6.768381 GGATCACCCTGTCTTAATCCTTTAAG 59.232 42.308 0.00 0.12 43.78 1.85
188 189 5.497474 TCACCCTGTCTTAATCCTTTAAGC 58.503 41.667 1.49 0.00 42.66 3.09
189 190 5.013704 TCACCCTGTCTTAATCCTTTAAGCA 59.986 40.000 1.49 2.98 42.66 3.91
190 191 5.888161 CACCCTGTCTTAATCCTTTAAGCAT 59.112 40.000 1.49 0.00 42.66 3.79
191 192 6.378280 CACCCTGTCTTAATCCTTTAAGCATT 59.622 38.462 1.49 0.00 42.66 3.56
192 193 6.954102 ACCCTGTCTTAATCCTTTAAGCATTT 59.046 34.615 0.00 0.00 42.66 2.32
193 194 7.093771 ACCCTGTCTTAATCCTTTAAGCATTTG 60.094 37.037 0.00 0.00 42.66 2.32
194 195 7.122650 CCCTGTCTTAATCCTTTAAGCATTTGA 59.877 37.037 0.00 0.00 42.66 2.69
195 196 8.522830 CCTGTCTTAATCCTTTAAGCATTTGAA 58.477 33.333 0.00 0.00 42.66 2.69
196 197 9.912634 CTGTCTTAATCCTTTAAGCATTTGAAA 57.087 29.630 0.00 0.00 42.66 2.69
197 198 9.912634 TGTCTTAATCCTTTAAGCATTTGAAAG 57.087 29.630 0.00 0.00 42.66 2.62
198 199 9.914131 GTCTTAATCCTTTAAGCATTTGAAAGT 57.086 29.630 0.00 0.00 42.66 2.66
204 205 9.860898 ATCCTTTAAGCATTTGAAAGTAATGAC 57.139 29.630 0.00 0.00 35.49 3.06
205 206 8.303876 TCCTTTAAGCATTTGAAAGTAATGACC 58.696 33.333 0.00 0.00 35.49 4.02
206 207 8.087750 CCTTTAAGCATTTGAAAGTAATGACCA 58.912 33.333 0.00 0.00 35.49 4.02
207 208 9.474920 CTTTAAGCATTTGAAAGTAATGACCAA 57.525 29.630 0.00 0.00 35.49 3.67
208 209 9.995003 TTTAAGCATTTGAAAGTAATGACCAAT 57.005 25.926 0.00 0.00 35.49 3.16
211 212 9.807649 AAGCATTTGAAAGTAATGACCAATATC 57.192 29.630 0.00 0.00 35.49 1.63
212 213 8.131100 AGCATTTGAAAGTAATGACCAATATCG 58.869 33.333 0.00 0.00 35.49 2.92
213 214 7.915397 GCATTTGAAAGTAATGACCAATATCGT 59.085 33.333 0.00 0.00 35.49 3.73
214 215 9.438291 CATTTGAAAGTAATGACCAATATCGTC 57.562 33.333 0.00 0.00 35.49 4.20
215 216 8.554835 TTTGAAAGTAATGACCAATATCGTCA 57.445 30.769 7.77 7.77 44.00 4.35
225 226 8.731275 ATGACCAATATCGTCATTAACTTCAA 57.269 30.769 10.99 0.00 46.36 2.69
226 227 8.731275 TGACCAATATCGTCATTAACTTCAAT 57.269 30.769 2.28 0.00 35.35 2.57
227 228 9.825109 TGACCAATATCGTCATTAACTTCAATA 57.175 29.630 2.28 0.00 35.35 1.90
229 230 9.052759 ACCAATATCGTCATTAACTTCAATACC 57.947 33.333 0.00 0.00 0.00 2.73
230 231 9.051679 CCAATATCGTCATTAACTTCAATACCA 57.948 33.333 0.00 0.00 0.00 3.25
233 234 6.397831 TCGTCATTAACTTCAATACCAACG 57.602 37.500 0.00 0.00 0.00 4.10
234 235 5.019498 CGTCATTAACTTCAATACCAACGC 58.981 41.667 0.00 0.00 0.00 4.84
235 236 5.163893 CGTCATTAACTTCAATACCAACGCT 60.164 40.000 0.00 0.00 0.00 5.07
236 237 6.035220 CGTCATTAACTTCAATACCAACGCTA 59.965 38.462 0.00 0.00 0.00 4.26
237 238 7.178074 GTCATTAACTTCAATACCAACGCTAC 58.822 38.462 0.00 0.00 0.00 3.58
238 239 6.314400 TCATTAACTTCAATACCAACGCTACC 59.686 38.462 0.00 0.00 0.00 3.18
239 240 3.975168 ACTTCAATACCAACGCTACCT 57.025 42.857 0.00 0.00 0.00 3.08
240 241 3.858247 ACTTCAATACCAACGCTACCTC 58.142 45.455 0.00 0.00 0.00 3.85
241 242 2.973694 TCAATACCAACGCTACCTCC 57.026 50.000 0.00 0.00 0.00 4.30
242 243 1.483415 TCAATACCAACGCTACCTCCC 59.517 52.381 0.00 0.00 0.00 4.30
243 244 1.485066 CAATACCAACGCTACCTCCCT 59.515 52.381 0.00 0.00 0.00 4.20
244 245 1.120530 ATACCAACGCTACCTCCCTG 58.879 55.000 0.00 0.00 0.00 4.45
245 246 1.610554 TACCAACGCTACCTCCCTGC 61.611 60.000 0.00 0.00 0.00 4.85
246 247 2.662596 CAACGCTACCTCCCTGCA 59.337 61.111 0.00 0.00 0.00 4.41
247 248 1.741770 CAACGCTACCTCCCTGCAC 60.742 63.158 0.00 0.00 0.00 4.57
248 249 2.214216 AACGCTACCTCCCTGCACA 61.214 57.895 0.00 0.00 0.00 4.57
249 250 1.764571 AACGCTACCTCCCTGCACAA 61.765 55.000 0.00 0.00 0.00 3.33
250 251 1.003839 CGCTACCTCCCTGCACAAA 60.004 57.895 0.00 0.00 0.00 2.83
251 252 1.021390 CGCTACCTCCCTGCACAAAG 61.021 60.000 0.00 0.00 0.00 2.77
252 253 0.678048 GCTACCTCCCTGCACAAAGG 60.678 60.000 2.65 2.65 37.05 3.11
253 254 0.984230 CTACCTCCCTGCACAAAGGA 59.016 55.000 9.84 1.02 40.02 3.36
254 255 1.561542 CTACCTCCCTGCACAAAGGAT 59.438 52.381 9.84 0.00 40.02 3.24
255 256 0.779997 ACCTCCCTGCACAAAGGATT 59.220 50.000 9.84 0.00 40.02 3.01
256 257 1.272147 ACCTCCCTGCACAAAGGATTC 60.272 52.381 9.84 0.00 40.02 2.52
257 258 1.089920 CTCCCTGCACAAAGGATTCG 58.910 55.000 0.00 0.00 40.02 3.34
258 259 0.690192 TCCCTGCACAAAGGATTCGA 59.310 50.000 0.00 0.00 40.02 3.71
259 260 0.804989 CCCTGCACAAAGGATTCGAC 59.195 55.000 0.00 0.00 40.02 4.20
260 261 1.522668 CCTGCACAAAGGATTCGACA 58.477 50.000 0.00 0.00 40.02 4.35
261 262 2.086869 CCTGCACAAAGGATTCGACAT 58.913 47.619 0.00 0.00 40.02 3.06
262 263 2.159476 CCTGCACAAAGGATTCGACATG 60.159 50.000 0.00 0.00 40.02 3.21
263 264 2.485426 CTGCACAAAGGATTCGACATGT 59.515 45.455 0.00 0.00 0.00 3.21
264 265 2.884012 TGCACAAAGGATTCGACATGTT 59.116 40.909 0.00 0.00 0.00 2.71
265 266 3.317711 TGCACAAAGGATTCGACATGTTT 59.682 39.130 0.00 0.00 0.00 2.83
266 267 4.202101 TGCACAAAGGATTCGACATGTTTT 60.202 37.500 0.00 0.00 0.00 2.43
267 268 4.382754 GCACAAAGGATTCGACATGTTTTC 59.617 41.667 0.00 0.00 0.00 2.29
268 269 5.762045 CACAAAGGATTCGACATGTTTTCT 58.238 37.500 0.00 0.00 0.00 2.52
269 270 5.853282 CACAAAGGATTCGACATGTTTTCTC 59.147 40.000 0.00 0.00 0.00 2.87
270 271 5.048713 ACAAAGGATTCGACATGTTTTCTCC 60.049 40.000 0.00 5.13 0.00 3.71
271 272 4.286297 AGGATTCGACATGTTTTCTCCA 57.714 40.909 16.19 0.00 0.00 3.86
272 273 4.256920 AGGATTCGACATGTTTTCTCCAG 58.743 43.478 16.19 0.00 0.00 3.86
273 274 3.375299 GGATTCGACATGTTTTCTCCAGG 59.625 47.826 0.00 0.00 0.00 4.45
274 275 1.808411 TCGACATGTTTTCTCCAGGC 58.192 50.000 0.00 0.00 0.00 4.85
275 276 1.347707 TCGACATGTTTTCTCCAGGCT 59.652 47.619 0.00 0.00 0.00 4.58
276 277 2.154462 CGACATGTTTTCTCCAGGCTT 58.846 47.619 0.00 0.00 0.00 4.35
277 278 2.554032 CGACATGTTTTCTCCAGGCTTT 59.446 45.455 0.00 0.00 0.00 3.51
278 279 3.610114 CGACATGTTTTCTCCAGGCTTTG 60.610 47.826 0.00 0.00 0.00 2.77
279 280 3.299503 ACATGTTTTCTCCAGGCTTTGT 58.700 40.909 0.00 0.00 0.00 2.83
280 281 3.319122 ACATGTTTTCTCCAGGCTTTGTC 59.681 43.478 0.00 0.00 0.00 3.18
281 282 3.011566 TGTTTTCTCCAGGCTTTGTCA 57.988 42.857 0.00 0.00 0.00 3.58
282 283 3.360867 TGTTTTCTCCAGGCTTTGTCAA 58.639 40.909 0.00 0.00 0.00 3.18
283 284 3.960102 TGTTTTCTCCAGGCTTTGTCAAT 59.040 39.130 0.00 0.00 0.00 2.57
284 285 4.405358 TGTTTTCTCCAGGCTTTGTCAATT 59.595 37.500 0.00 0.00 0.00 2.32
285 286 4.853924 TTTCTCCAGGCTTTGTCAATTC 57.146 40.909 0.00 0.00 0.00 2.17
286 287 2.795329 TCTCCAGGCTTTGTCAATTCC 58.205 47.619 0.00 0.00 0.00 3.01
287 288 2.376518 TCTCCAGGCTTTGTCAATTCCT 59.623 45.455 0.00 1.43 0.00 3.36
288 289 3.160269 CTCCAGGCTTTGTCAATTCCTT 58.840 45.455 3.99 0.00 0.00 3.36
289 290 3.575687 CTCCAGGCTTTGTCAATTCCTTT 59.424 43.478 3.99 0.00 0.00 3.11
290 291 3.573967 TCCAGGCTTTGTCAATTCCTTTC 59.426 43.478 3.99 0.00 0.00 2.62
291 292 3.321682 CCAGGCTTTGTCAATTCCTTTCA 59.678 43.478 3.99 0.00 0.00 2.69
292 293 4.020839 CCAGGCTTTGTCAATTCCTTTCAT 60.021 41.667 3.99 0.00 0.00 2.57
293 294 4.927425 CAGGCTTTGTCAATTCCTTTCATG 59.073 41.667 3.99 0.00 0.00 3.07
294 295 3.681417 GGCTTTGTCAATTCCTTTCATGC 59.319 43.478 0.00 0.00 0.00 4.06
295 296 3.365820 GCTTTGTCAATTCCTTTCATGCG 59.634 43.478 0.00 0.00 0.00 4.73
296 297 2.634982 TGTCAATTCCTTTCATGCGC 57.365 45.000 0.00 0.00 0.00 6.09
297 298 1.885233 TGTCAATTCCTTTCATGCGCA 59.115 42.857 14.96 14.96 0.00 6.09
298 299 2.295629 TGTCAATTCCTTTCATGCGCAA 59.704 40.909 17.11 0.00 0.00 4.85
299 300 3.243670 TGTCAATTCCTTTCATGCGCAAA 60.244 39.130 17.11 0.98 0.00 3.68
300 301 3.365820 GTCAATTCCTTTCATGCGCAAAG 59.634 43.478 17.11 14.20 0.00 2.77
335 336 1.375523 CCACTACGAGGGGTGCAAC 60.376 63.158 0.00 0.00 32.85 4.17
339 340 1.534476 TACGAGGGGTGCAACTGGA 60.534 57.895 0.00 0.00 36.74 3.86
422 424 2.034812 GGAGTCCGGCTGTAGTTATGAG 59.965 54.545 0.00 0.00 0.00 2.90
440 442 2.565391 TGAGAACAATCGGGCTTACAGA 59.435 45.455 0.00 0.00 0.00 3.41
451 453 2.347731 GGCTTACAGAAGAAGGAACCG 58.652 52.381 0.00 0.00 34.25 4.44
512 514 1.211949 CGGGCTTATGGGAGAAGGAAA 59.788 52.381 0.00 0.00 0.00 3.13
515 517 3.373110 GGGCTTATGGGAGAAGGAAACAT 60.373 47.826 0.00 0.00 0.00 2.71
519 521 2.879103 TGGGAGAAGGAAACATGTCC 57.121 50.000 0.00 0.00 38.03 4.02
530 532 4.126437 GGAAACATGTCCAAACCCAAAAG 58.874 43.478 0.00 0.00 37.65 2.27
551 553 8.571336 CAAAAGTTATCTCTTTCACTTCACCAT 58.429 33.333 0.00 0.00 36.75 3.55
552 554 7.678947 AAGTTATCTCTTTCACTTCACCATG 57.321 36.000 0.00 0.00 0.00 3.66
553 555 5.645497 AGTTATCTCTTTCACTTCACCATGC 59.355 40.000 0.00 0.00 0.00 4.06
555 557 1.466167 CTCTTTCACTTCACCATGCGG 59.534 52.381 0.00 0.00 38.77 5.69
557 559 1.197721 CTTTCACTTCACCATGCGGTC 59.802 52.381 0.00 0.00 44.71 4.79
558 560 0.605319 TTCACTTCACCATGCGGTCC 60.605 55.000 0.00 0.00 44.71 4.46
638 645 4.035208 CAGAGGTAAGAAAACACACACACC 59.965 45.833 0.00 0.00 0.00 4.16
639 646 3.942748 GAGGTAAGAAAACACACACACCA 59.057 43.478 0.00 0.00 0.00 4.17
640 647 4.532834 AGGTAAGAAAACACACACACCAT 58.467 39.130 0.00 0.00 0.00 3.55
641 648 4.953579 AGGTAAGAAAACACACACACCATT 59.046 37.500 0.00 0.00 0.00 3.16
642 649 5.420739 AGGTAAGAAAACACACACACCATTT 59.579 36.000 0.00 0.00 0.00 2.32
643 650 6.603997 AGGTAAGAAAACACACACACCATTTA 59.396 34.615 0.00 0.00 0.00 1.40
644 651 6.693978 GGTAAGAAAACACACACACCATTTAC 59.306 38.462 0.00 0.00 0.00 2.01
645 652 5.906113 AGAAAACACACACACCATTTACA 57.094 34.783 0.00 0.00 0.00 2.41
646 653 6.463995 AGAAAACACACACACCATTTACAT 57.536 33.333 0.00 0.00 0.00 2.29
647 654 6.503524 AGAAAACACACACACCATTTACATC 58.496 36.000 0.00 0.00 0.00 3.06
648 655 4.846779 AACACACACACCATTTACATCC 57.153 40.909 0.00 0.00 0.00 3.51
649 656 3.826524 ACACACACACCATTTACATCCA 58.173 40.909 0.00 0.00 0.00 3.41
650 657 3.568007 ACACACACACCATTTACATCCAC 59.432 43.478 0.00 0.00 0.00 4.02
651 658 3.057596 CACACACACCATTTACATCCACC 60.058 47.826 0.00 0.00 0.00 4.61
652 659 2.161410 CACACACCATTTACATCCACCG 59.839 50.000 0.00 0.00 0.00 4.94
653 660 2.039216 ACACACCATTTACATCCACCGA 59.961 45.455 0.00 0.00 0.00 4.69
654 661 2.677836 CACACCATTTACATCCACCGAG 59.322 50.000 0.00 0.00 0.00 4.63
655 662 1.670811 CACCATTTACATCCACCGAGC 59.329 52.381 0.00 0.00 0.00 5.03
656 663 1.559682 ACCATTTACATCCACCGAGCT 59.440 47.619 0.00 0.00 0.00 4.09
657 664 2.769663 ACCATTTACATCCACCGAGCTA 59.230 45.455 0.00 0.00 0.00 3.32
658 665 3.131396 CCATTTACATCCACCGAGCTAC 58.869 50.000 0.00 0.00 0.00 3.58
659 666 3.181465 CCATTTACATCCACCGAGCTACT 60.181 47.826 0.00 0.00 0.00 2.57
660 667 3.520290 TTTACATCCACCGAGCTACTG 57.480 47.619 0.00 0.00 0.00 2.74
661 668 2.139323 TACATCCACCGAGCTACTGT 57.861 50.000 0.00 0.00 0.00 3.55
662 669 0.532573 ACATCCACCGAGCTACTGTG 59.467 55.000 0.00 0.00 34.33 3.66
663 670 0.532573 CATCCACCGAGCTACTGTGT 59.467 55.000 8.43 0.00 33.02 3.72
664 671 1.066858 CATCCACCGAGCTACTGTGTT 60.067 52.381 8.43 0.00 33.02 3.32
665 672 0.601558 TCCACCGAGCTACTGTGTTC 59.398 55.000 8.43 0.00 33.02 3.18
666 673 0.317160 CCACCGAGCTACTGTGTTCA 59.683 55.000 8.43 0.00 33.02 3.18
667 674 1.419374 CACCGAGCTACTGTGTTCAC 58.581 55.000 0.00 0.00 0.00 3.18
668 675 1.037493 ACCGAGCTACTGTGTTCACA 58.963 50.000 5.52 5.52 0.00 3.58
669 676 1.411246 ACCGAGCTACTGTGTTCACAA 59.589 47.619 7.07 0.00 0.00 3.33
670 677 2.061773 CCGAGCTACTGTGTTCACAAG 58.938 52.381 7.07 4.10 0.00 3.16
671 678 2.288213 CCGAGCTACTGTGTTCACAAGA 60.288 50.000 7.07 0.00 0.00 3.02
672 679 3.381045 CGAGCTACTGTGTTCACAAGAA 58.619 45.455 7.07 0.00 0.00 2.52
673 680 3.802139 CGAGCTACTGTGTTCACAAGAAA 59.198 43.478 7.07 0.00 35.08 2.52
674 681 4.270084 CGAGCTACTGTGTTCACAAGAAAA 59.730 41.667 7.07 0.00 35.08 2.29
675 682 5.220586 CGAGCTACTGTGTTCACAAGAAAAA 60.221 40.000 7.07 0.00 35.08 1.94
695 702 4.499037 AAAAAGTTACATTCACCGAGCC 57.501 40.909 0.00 0.00 0.00 4.70
696 703 1.722011 AAGTTACATTCACCGAGCCG 58.278 50.000 0.00 0.00 0.00 5.52
712 719 3.681473 CGGGAGGGGAAACAAAGC 58.319 61.111 0.00 0.00 0.00 3.51
713 720 1.977009 CGGGAGGGGAAACAAAGCC 60.977 63.158 0.00 0.00 0.00 4.35
714 721 1.977009 GGGAGGGGAAACAAAGCCG 60.977 63.158 0.00 0.00 0.00 5.52
715 722 1.977009 GGAGGGGAAACAAAGCCGG 60.977 63.158 0.00 0.00 0.00 6.13
716 723 1.074248 GAGGGGAAACAAAGCCGGA 59.926 57.895 5.05 0.00 0.00 5.14
717 724 0.960861 GAGGGGAAACAAAGCCGGAG 60.961 60.000 5.05 0.00 0.00 4.63
718 725 2.636412 GGGGAAACAAAGCCGGAGC 61.636 63.158 5.05 0.00 40.32 4.70
719 726 2.561373 GGAAACAAAGCCGGAGCG 59.439 61.111 5.05 0.00 46.67 5.03
720 727 2.126850 GAAACAAAGCCGGAGCGC 60.127 61.111 5.05 0.00 46.67 5.92
721 728 2.594592 AAACAAAGCCGGAGCGCT 60.595 55.556 11.27 11.27 46.67 5.92
722 729 2.514505 GAAACAAAGCCGGAGCGCTC 62.515 60.000 29.38 29.38 46.67 5.03
736 743 3.497879 GCTCCGGCGTTTGCTATT 58.502 55.556 6.01 0.00 42.25 1.73
737 744 1.352056 GCTCCGGCGTTTGCTATTC 59.648 57.895 6.01 0.00 42.25 1.75
738 745 1.090052 GCTCCGGCGTTTGCTATTCT 61.090 55.000 6.01 0.00 42.25 2.40
739 746 1.369625 CTCCGGCGTTTGCTATTCTT 58.630 50.000 6.01 0.00 42.25 2.52
740 747 2.546778 CTCCGGCGTTTGCTATTCTTA 58.453 47.619 6.01 0.00 42.25 2.10
741 748 2.540101 CTCCGGCGTTTGCTATTCTTAG 59.460 50.000 6.01 0.00 42.25 2.18
756 763 8.008902 GCTATTCTTAGCGAGGTTACTAAATG 57.991 38.462 0.00 0.00 41.38 2.32
757 764 6.846325 ATTCTTAGCGAGGTTACTAAATGC 57.154 37.500 0.00 0.00 0.00 3.56
758 765 5.333299 TCTTAGCGAGGTTACTAAATGCA 57.667 39.130 0.00 0.00 0.00 3.96
759 766 5.348986 TCTTAGCGAGGTTACTAAATGCAG 58.651 41.667 0.00 0.00 0.00 4.41
760 767 2.280628 AGCGAGGTTACTAAATGCAGC 58.719 47.619 0.00 0.00 0.00 5.25
761 768 1.004927 GCGAGGTTACTAAATGCAGCG 60.005 52.381 0.00 0.00 0.00 5.18
762 769 2.536365 CGAGGTTACTAAATGCAGCGA 58.464 47.619 0.00 0.00 0.00 4.93
763 770 3.123804 CGAGGTTACTAAATGCAGCGAT 58.876 45.455 0.00 0.00 0.00 4.58
764 771 3.555956 CGAGGTTACTAAATGCAGCGATT 59.444 43.478 0.00 0.00 0.00 3.34
765 772 4.318121 CGAGGTTACTAAATGCAGCGATTC 60.318 45.833 0.00 0.00 0.00 2.52
766 773 4.513442 AGGTTACTAAATGCAGCGATTCA 58.487 39.130 0.00 0.00 0.00 2.57
767 774 5.126067 AGGTTACTAAATGCAGCGATTCAT 58.874 37.500 0.00 0.00 0.00 2.57
768 775 5.237344 AGGTTACTAAATGCAGCGATTCATC 59.763 40.000 0.00 0.00 0.00 2.92
786 793 8.098504 CGATTCATCGTCATTAATGTAGATTCG 58.901 37.037 14.97 18.39 44.74 3.34
787 794 8.818141 ATTCATCGTCATTAATGTAGATTCGT 57.182 30.769 14.97 6.60 0.00 3.85
788 795 8.642908 TTCATCGTCATTAATGTAGATTCGTT 57.357 30.769 14.97 5.08 0.00 3.85
789 796 9.738832 TTCATCGTCATTAATGTAGATTCGTTA 57.261 29.630 14.97 2.97 0.00 3.18
790 797 9.177304 TCATCGTCATTAATGTAGATTCGTTAC 57.823 33.333 14.97 1.55 0.00 2.50
791 798 7.919313 TCGTCATTAATGTAGATTCGTTACC 57.081 36.000 14.97 0.00 0.00 2.85
792 799 6.919662 TCGTCATTAATGTAGATTCGTTACCC 59.080 38.462 14.97 0.00 0.00 3.69
793 800 6.921857 CGTCATTAATGTAGATTCGTTACCCT 59.078 38.462 14.97 0.00 0.00 4.34
794 801 7.437267 CGTCATTAATGTAGATTCGTTACCCTT 59.563 37.037 14.97 0.00 0.00 3.95
795 802 8.548721 GTCATTAATGTAGATTCGTTACCCTTG 58.451 37.037 14.97 0.00 0.00 3.61
796 803 8.262227 TCATTAATGTAGATTCGTTACCCTTGT 58.738 33.333 14.97 0.00 0.00 3.16
797 804 7.837202 TTAATGTAGATTCGTTACCCTTGTG 57.163 36.000 0.00 0.00 0.00 3.33
798 805 5.670792 ATGTAGATTCGTTACCCTTGTGA 57.329 39.130 0.00 0.00 0.00 3.58
799 806 4.813027 TGTAGATTCGTTACCCTTGTGAC 58.187 43.478 0.00 0.00 0.00 3.67
800 807 4.525487 TGTAGATTCGTTACCCTTGTGACT 59.475 41.667 0.00 0.00 0.00 3.41
801 808 4.618920 AGATTCGTTACCCTTGTGACTT 57.381 40.909 0.00 0.00 0.00 3.01
802 809 4.566987 AGATTCGTTACCCTTGTGACTTC 58.433 43.478 0.00 0.00 0.00 3.01
803 810 3.823281 TTCGTTACCCTTGTGACTTCA 57.177 42.857 0.00 0.00 0.00 3.02
804 811 3.823281 TCGTTACCCTTGTGACTTCAA 57.177 42.857 0.00 0.00 0.00 2.69
805 812 4.139859 TCGTTACCCTTGTGACTTCAAA 57.860 40.909 0.00 0.00 0.00 2.69
806 813 4.515361 TCGTTACCCTTGTGACTTCAAAA 58.485 39.130 0.00 0.00 0.00 2.44
807 814 4.942483 TCGTTACCCTTGTGACTTCAAAAA 59.058 37.500 0.00 0.00 0.00 1.94
828 835 4.983671 AAACCGAGCTTTCTTTTGAACT 57.016 36.364 0.00 0.00 38.30 3.01
829 836 6.445357 AAAACCGAGCTTTCTTTTGAACTA 57.555 33.333 0.00 0.00 38.30 2.24
830 837 5.419760 AACCGAGCTTTCTTTTGAACTAC 57.580 39.130 0.00 0.00 38.30 2.73
831 838 3.493503 ACCGAGCTTTCTTTTGAACTACG 59.506 43.478 0.00 0.00 38.30 3.51
832 839 3.120649 CCGAGCTTTCTTTTGAACTACGG 60.121 47.826 0.00 0.00 38.30 4.02
833 840 3.664537 CGAGCTTTCTTTTGAACTACGGC 60.665 47.826 0.00 0.00 38.30 5.68
834 841 2.552743 AGCTTTCTTTTGAACTACGGCC 59.447 45.455 0.00 0.00 38.30 6.13
835 842 2.292292 GCTTTCTTTTGAACTACGGCCA 59.708 45.455 2.24 0.00 38.30 5.36
836 843 3.852205 GCTTTCTTTTGAACTACGGCCAC 60.852 47.826 2.24 0.00 38.30 5.01
837 844 2.922740 TCTTTTGAACTACGGCCACT 57.077 45.000 2.24 0.00 0.00 4.00
838 845 2.762745 TCTTTTGAACTACGGCCACTC 58.237 47.619 2.24 0.00 0.00 3.51
839 846 2.367567 TCTTTTGAACTACGGCCACTCT 59.632 45.455 2.24 0.00 0.00 3.24
840 847 2.922740 TTTGAACTACGGCCACTCTT 57.077 45.000 2.24 0.00 0.00 2.85
841 848 2.922740 TTGAACTACGGCCACTCTTT 57.077 45.000 2.24 0.00 0.00 2.52
842 849 2.450609 TGAACTACGGCCACTCTTTC 57.549 50.000 2.24 0.00 0.00 2.62
843 850 1.968493 TGAACTACGGCCACTCTTTCT 59.032 47.619 2.24 0.00 0.00 2.52
844 851 2.029290 TGAACTACGGCCACTCTTTCTC 60.029 50.000 2.24 0.00 0.00 2.87
845 852 1.629043 ACTACGGCCACTCTTTCTCA 58.371 50.000 2.24 0.00 0.00 3.27
846 853 1.272769 ACTACGGCCACTCTTTCTCAC 59.727 52.381 2.24 0.00 0.00 3.51
847 854 1.546476 CTACGGCCACTCTTTCTCACT 59.454 52.381 2.24 0.00 0.00 3.41
848 855 0.318762 ACGGCCACTCTTTCTCACTC 59.681 55.000 2.24 0.00 0.00 3.51
849 856 0.390472 CGGCCACTCTTTCTCACTCC 60.390 60.000 2.24 0.00 0.00 3.85
850 857 0.035915 GGCCACTCTTTCTCACTCCC 60.036 60.000 0.00 0.00 0.00 4.30
851 858 0.687354 GCCACTCTTTCTCACTCCCA 59.313 55.000 0.00 0.00 0.00 4.37
852 859 1.280421 GCCACTCTTTCTCACTCCCAT 59.720 52.381 0.00 0.00 0.00 4.00
853 860 2.679349 GCCACTCTTTCTCACTCCCATC 60.679 54.545 0.00 0.00 0.00 3.51
854 861 2.093235 CCACTCTTTCTCACTCCCATCC 60.093 54.545 0.00 0.00 0.00 3.51
855 862 2.836981 CACTCTTTCTCACTCCCATCCT 59.163 50.000 0.00 0.00 0.00 3.24
856 863 3.103742 ACTCTTTCTCACTCCCATCCTC 58.896 50.000 0.00 0.00 0.00 3.71
857 864 3.245948 ACTCTTTCTCACTCCCATCCTCT 60.246 47.826 0.00 0.00 0.00 3.69
858 865 3.370104 TCTTTCTCACTCCCATCCTCTC 58.630 50.000 0.00 0.00 0.00 3.20
859 866 2.928036 TTCTCACTCCCATCCTCTCA 57.072 50.000 0.00 0.00 0.00 3.27
860 867 2.928036 TCTCACTCCCATCCTCTCAA 57.072 50.000 0.00 0.00 0.00 3.02
861 868 2.744760 TCTCACTCCCATCCTCTCAAG 58.255 52.381 0.00 0.00 0.00 3.02
862 869 1.761784 CTCACTCCCATCCTCTCAAGG 59.238 57.143 0.00 0.00 44.89 3.61
870 877 2.685380 CCTCTCAAGGACCCCGCT 60.685 66.667 0.00 0.00 46.67 5.52
1073 1080 2.672651 TAACGCCGACCTCGTCCA 60.673 61.111 0.00 0.00 39.48 4.02
1148 1155 2.754254 GGTGACCGGGGAAATGCC 60.754 66.667 6.32 0.00 0.00 4.40
1245 1252 0.179006 GACTGATGATCCTTGCCCCC 60.179 60.000 0.00 0.00 0.00 5.40
1437 1444 2.614013 ACAAGGGGGAGGCGGAAT 60.614 61.111 0.00 0.00 0.00 3.01
1827 1864 1.925285 TATCAGCAGCCCCCTTGGTG 61.925 60.000 0.00 0.00 43.48 4.17
2080 2117 0.678395 AGCTGCTATGATGTCTCCCG 59.322 55.000 0.00 0.00 0.00 5.14
2162 2199 3.209410 CTGTAATGGATGCTCCTGTTCC 58.791 50.000 4.21 0.00 37.46 3.62
2233 2270 6.293680 GGAGGAAAATCACTTTGTCAAGAGAC 60.294 42.308 0.00 0.00 45.19 3.36
2289 2326 2.172679 TGCATCAACAGGCATCAACAT 58.827 42.857 0.00 0.00 33.37 2.71
2450 2487 4.164988 AGAGGATAATGTGGTGAAGGAAGG 59.835 45.833 0.00 0.00 0.00 3.46
2481 2518 2.683362 GGTGTTACTAAGGAATGGCAGC 59.317 50.000 0.00 0.00 0.00 5.25
2809 2848 2.033141 GTGGAGCAGGCAGAAGCA 59.967 61.111 0.00 0.00 44.61 3.91
3077 3116 2.032528 TTGGAGCTGCAAGTCGGG 59.967 61.111 17.55 0.00 35.30 5.14
3100 3139 0.393537 CCACCTCCAAGGCTGATGTC 60.394 60.000 0.00 0.00 39.63 3.06
3215 3254 6.322712 TGCCACAACTAACCTTAGTCAAATTT 59.677 34.615 0.00 0.00 42.86 1.82
3320 3359 2.083774 ACCATGGTGTGATAAAGCGTG 58.916 47.619 18.99 0.00 32.96 5.34
3369 3408 2.430694 ACTGCGGCATGACTAAGATACA 59.569 45.455 1.75 0.00 0.00 2.29
3450 3489 4.020543 AGTTCCTCTCGTAGAAGCAAGAT 58.979 43.478 0.00 0.00 34.09 2.40
3559 3598 1.522258 CGGTGTGAAGCAACAAAATGC 59.478 47.619 0.00 0.00 46.78 3.56
3617 3665 3.018423 AGATATGGACTGGGTTTTGGC 57.982 47.619 0.00 0.00 0.00 4.52
3704 3752 3.014304 TGTTGTAGCCTCTCGGACTAT 57.986 47.619 0.00 0.00 0.00 2.12
3723 3771 7.173218 CGGACTATATTTATGAATGCACTGGTT 59.827 37.037 0.00 0.00 0.00 3.67
3962 4650 6.237808 CGTTCACACAATATTCATCATCGACA 60.238 38.462 0.00 0.00 0.00 4.35
4033 4721 1.255882 AACATGGGCTGAATGCGAAA 58.744 45.000 0.00 0.00 44.05 3.46
4050 4738 2.738213 AAAGGGACAGCCTGACAGCG 62.738 60.000 0.00 0.00 38.01 5.18
4141 4829 1.970114 CAGCAGCAAGGTGGGACAG 60.970 63.158 0.00 0.00 41.80 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.036829 TGACACAATTATTTTCATGGAGCATG 58.963 34.615 0.00 0.00 42.60 4.06
2 3 7.172868 TGACACAATTATTTTCATGGAGCAT 57.827 32.000 0.00 0.00 0.00 3.79
3 4 6.587206 TGACACAATTATTTTCATGGAGCA 57.413 33.333 0.00 0.00 0.00 4.26
4 5 7.434307 CAGATGACACAATTATTTTCATGGAGC 59.566 37.037 0.00 0.00 0.00 4.70
5 6 7.434307 GCAGATGACACAATTATTTTCATGGAG 59.566 37.037 0.00 0.00 0.00 3.86
6 7 7.259882 GCAGATGACACAATTATTTTCATGGA 58.740 34.615 0.00 0.00 0.00 3.41
7 8 6.197655 CGCAGATGACACAATTATTTTCATGG 59.802 38.462 0.00 0.00 0.00 3.66
8 9 6.748658 ACGCAGATGACACAATTATTTTCATG 59.251 34.615 0.00 0.00 0.00 3.07
9 10 6.855836 ACGCAGATGACACAATTATTTTCAT 58.144 32.000 0.00 0.00 0.00 2.57
10 11 6.252967 ACGCAGATGACACAATTATTTTCA 57.747 33.333 0.00 0.00 0.00 2.69
11 12 8.736742 CAATACGCAGATGACACAATTATTTTC 58.263 33.333 0.00 0.00 0.00 2.29
12 13 8.243426 ACAATACGCAGATGACACAATTATTTT 58.757 29.630 0.00 0.00 0.00 1.82
13 14 7.761409 ACAATACGCAGATGACACAATTATTT 58.239 30.769 0.00 0.00 0.00 1.40
14 15 7.320443 ACAATACGCAGATGACACAATTATT 57.680 32.000 0.00 0.00 0.00 1.40
15 16 6.925610 ACAATACGCAGATGACACAATTAT 57.074 33.333 0.00 0.00 0.00 1.28
16 17 6.478673 CCTACAATACGCAGATGACACAATTA 59.521 38.462 0.00 0.00 0.00 1.40
17 18 5.294306 CCTACAATACGCAGATGACACAATT 59.706 40.000 0.00 0.00 0.00 2.32
18 19 4.811024 CCTACAATACGCAGATGACACAAT 59.189 41.667 0.00 0.00 0.00 2.71
19 20 4.081917 TCCTACAATACGCAGATGACACAA 60.082 41.667 0.00 0.00 0.00 3.33
20 21 3.445805 TCCTACAATACGCAGATGACACA 59.554 43.478 0.00 0.00 0.00 3.72
21 22 4.041740 TCCTACAATACGCAGATGACAC 57.958 45.455 0.00 0.00 0.00 3.67
22 23 4.937201 ATCCTACAATACGCAGATGACA 57.063 40.909 0.00 0.00 0.00 3.58
23 24 6.255596 TCTATCCTACAATACGCAGATGAC 57.744 41.667 0.00 0.00 0.00 3.06
24 25 7.067129 GGTATCTATCCTACAATACGCAGATGA 59.933 40.741 0.00 0.00 0.00 2.92
25 26 7.197017 GGTATCTATCCTACAATACGCAGATG 58.803 42.308 0.00 0.00 0.00 2.90
26 27 6.321690 GGGTATCTATCCTACAATACGCAGAT 59.678 42.308 0.00 0.00 37.44 2.90
27 28 5.651139 GGGTATCTATCCTACAATACGCAGA 59.349 44.000 0.00 0.00 37.44 4.26
28 29 5.163540 GGGGTATCTATCCTACAATACGCAG 60.164 48.000 9.61 0.00 38.55 5.18
29 30 4.708421 GGGGTATCTATCCTACAATACGCA 59.292 45.833 9.61 0.00 38.55 5.24
30 31 4.708421 TGGGGTATCTATCCTACAATACGC 59.292 45.833 0.00 0.00 37.02 4.42
31 32 5.126707 GGTGGGGTATCTATCCTACAATACG 59.873 48.000 5.51 0.00 39.48 3.06
32 33 6.021030 TGGTGGGGTATCTATCCTACAATAC 58.979 44.000 5.51 0.00 39.48 1.89
33 34 6.235765 TGGTGGGGTATCTATCCTACAATA 57.764 41.667 5.51 0.00 39.48 1.90
34 35 5.101254 TGGTGGGGTATCTATCCTACAAT 57.899 43.478 5.51 0.00 39.48 2.71
35 36 4.562934 TGGTGGGGTATCTATCCTACAA 57.437 45.455 5.51 0.00 39.48 2.41
36 37 4.512207 GGATGGTGGGGTATCTATCCTACA 60.512 50.000 5.51 0.00 39.48 2.74
37 38 4.031611 GGATGGTGGGGTATCTATCCTAC 58.968 52.174 0.00 0.00 38.24 3.18
38 39 3.670626 TGGATGGTGGGGTATCTATCCTA 59.329 47.826 0.00 0.00 40.67 2.94
39 40 2.458706 TGGATGGTGGGGTATCTATCCT 59.541 50.000 0.00 0.00 40.67 3.24
40 41 2.915869 TGGATGGTGGGGTATCTATCC 58.084 52.381 0.00 0.00 40.53 2.59
41 42 6.831664 ATAATGGATGGTGGGGTATCTATC 57.168 41.667 0.00 0.00 0.00 2.08
42 43 7.856643 ACATATAATGGATGGTGGGGTATCTAT 59.143 37.037 0.00 0.00 33.60 1.98
43 44 7.127186 CACATATAATGGATGGTGGGGTATCTA 59.873 40.741 0.00 0.00 33.60 1.98
44 45 6.038609 ACATATAATGGATGGTGGGGTATCT 58.961 40.000 0.00 0.00 33.60 1.98
45 46 6.122277 CACATATAATGGATGGTGGGGTATC 58.878 44.000 0.00 0.00 33.60 2.24
46 47 5.044179 CCACATATAATGGATGGTGGGGTAT 60.044 44.000 0.00 0.00 39.17 2.73
47 48 4.290985 CCACATATAATGGATGGTGGGGTA 59.709 45.833 0.00 0.00 39.17 3.69
48 49 3.075882 CCACATATAATGGATGGTGGGGT 59.924 47.826 0.00 0.00 39.17 4.95
49 50 3.700538 CCACATATAATGGATGGTGGGG 58.299 50.000 0.00 0.00 39.17 4.96
51 52 4.656100 TCCCACATATAATGGATGGTGG 57.344 45.455 7.77 0.00 41.00 4.61
52 53 7.554118 GTCTTATCCCACATATAATGGATGGTG 59.446 40.741 7.77 0.00 39.87 4.17
53 54 7.311929 GGTCTTATCCCACATATAATGGATGGT 60.312 40.741 7.77 0.00 39.87 3.55
54 55 7.056635 GGTCTTATCCCACATATAATGGATGG 58.943 42.308 7.77 0.00 39.87 3.51
55 56 7.632861 TGGTCTTATCCCACATATAATGGATG 58.367 38.462 7.77 0.00 39.87 3.51
56 57 7.829224 TGGTCTTATCCCACATATAATGGAT 57.171 36.000 7.77 5.75 39.87 3.41
68 69 2.316677 TCAGGTAGGTGGTCTTATCCCA 59.683 50.000 0.00 0.00 0.00 4.37
69 70 2.699321 GTCAGGTAGGTGGTCTTATCCC 59.301 54.545 0.00 0.00 0.00 3.85
70 71 2.699321 GGTCAGGTAGGTGGTCTTATCC 59.301 54.545 0.00 0.00 0.00 2.59
71 72 3.371965 TGGTCAGGTAGGTGGTCTTATC 58.628 50.000 0.00 0.00 0.00 1.75
72 73 3.484953 TGGTCAGGTAGGTGGTCTTAT 57.515 47.619 0.00 0.00 0.00 1.73
73 74 3.012502 AGATGGTCAGGTAGGTGGTCTTA 59.987 47.826 0.00 0.00 0.00 2.10
74 75 2.188817 GATGGTCAGGTAGGTGGTCTT 58.811 52.381 0.00 0.00 0.00 3.01
75 76 1.362932 AGATGGTCAGGTAGGTGGTCT 59.637 52.381 0.00 0.00 0.00 3.85
76 77 1.867363 AGATGGTCAGGTAGGTGGTC 58.133 55.000 0.00 0.00 0.00 4.02
77 78 1.909302 CAAGATGGTCAGGTAGGTGGT 59.091 52.381 0.00 0.00 0.00 4.16
78 79 1.909302 ACAAGATGGTCAGGTAGGTGG 59.091 52.381 0.00 0.00 0.00 4.61
79 80 3.703001 AACAAGATGGTCAGGTAGGTG 57.297 47.619 0.00 0.00 0.00 4.00
80 81 3.306780 CGAAACAAGATGGTCAGGTAGGT 60.307 47.826 0.00 0.00 0.00 3.08
81 82 3.262420 CGAAACAAGATGGTCAGGTAGG 58.738 50.000 0.00 0.00 0.00 3.18
82 83 2.673368 GCGAAACAAGATGGTCAGGTAG 59.327 50.000 0.00 0.00 0.00 3.18
83 84 2.301870 AGCGAAACAAGATGGTCAGGTA 59.698 45.455 0.00 0.00 0.00 3.08
84 85 1.072331 AGCGAAACAAGATGGTCAGGT 59.928 47.619 0.00 0.00 0.00 4.00
85 86 1.734465 GAGCGAAACAAGATGGTCAGG 59.266 52.381 0.00 0.00 0.00 3.86
86 87 2.693069 AGAGCGAAACAAGATGGTCAG 58.307 47.619 0.00 0.00 0.00 3.51
87 88 2.839486 AGAGCGAAACAAGATGGTCA 57.161 45.000 0.00 0.00 0.00 4.02
88 89 6.312918 TGTTAATAGAGCGAAACAAGATGGTC 59.687 38.462 0.00 0.00 0.00 4.02
89 90 6.170506 TGTTAATAGAGCGAAACAAGATGGT 58.829 36.000 0.00 0.00 0.00 3.55
90 91 6.662414 TGTTAATAGAGCGAAACAAGATGG 57.338 37.500 0.00 0.00 0.00 3.51
95 96 5.613795 CGTGCTTGTTAATAGAGCGAAACAA 60.614 40.000 0.00 0.00 38.97 2.83
96 97 4.143200 CGTGCTTGTTAATAGAGCGAAACA 60.143 41.667 0.00 0.00 39.23 2.83
97 98 4.323751 CGTGCTTGTTAATAGAGCGAAAC 58.676 43.478 0.00 0.00 39.23 2.78
98 99 3.369756 CCGTGCTTGTTAATAGAGCGAAA 59.630 43.478 0.00 0.00 39.23 3.46
99 100 2.927477 CCGTGCTTGTTAATAGAGCGAA 59.073 45.455 0.00 0.00 39.23 4.70
100 101 2.094390 ACCGTGCTTGTTAATAGAGCGA 60.094 45.455 0.00 0.00 39.23 4.93
101 102 2.268298 ACCGTGCTTGTTAATAGAGCG 58.732 47.619 0.00 0.00 39.23 5.03
102 103 3.259064 TGACCGTGCTTGTTAATAGAGC 58.741 45.455 0.00 0.00 36.95 4.09
103 104 4.688879 TGTTGACCGTGCTTGTTAATAGAG 59.311 41.667 0.00 0.00 0.00 2.43
104 105 4.633175 TGTTGACCGTGCTTGTTAATAGA 58.367 39.130 0.00 0.00 0.00 1.98
105 106 5.545658 ATGTTGACCGTGCTTGTTAATAG 57.454 39.130 0.00 0.00 0.00 1.73
106 107 6.819146 TGATATGTTGACCGTGCTTGTTAATA 59.181 34.615 0.00 0.00 0.00 0.98
107 108 5.645929 TGATATGTTGACCGTGCTTGTTAAT 59.354 36.000 0.00 0.00 0.00 1.40
108 109 4.998033 TGATATGTTGACCGTGCTTGTTAA 59.002 37.500 0.00 0.00 0.00 2.01
109 110 4.570930 TGATATGTTGACCGTGCTTGTTA 58.429 39.130 0.00 0.00 0.00 2.41
110 111 3.407698 TGATATGTTGACCGTGCTTGTT 58.592 40.909 0.00 0.00 0.00 2.83
111 112 3.052455 TGATATGTTGACCGTGCTTGT 57.948 42.857 0.00 0.00 0.00 3.16
112 113 3.426159 GGTTGATATGTTGACCGTGCTTG 60.426 47.826 0.00 0.00 0.00 4.01
113 114 2.747446 GGTTGATATGTTGACCGTGCTT 59.253 45.455 0.00 0.00 0.00 3.91
114 115 2.290008 TGGTTGATATGTTGACCGTGCT 60.290 45.455 0.00 0.00 34.90 4.40
115 116 2.080693 TGGTTGATATGTTGACCGTGC 58.919 47.619 0.00 0.00 34.90 5.34
116 117 3.070748 TGTGGTTGATATGTTGACCGTG 58.929 45.455 0.00 0.00 34.90 4.94
117 118 3.410631 TGTGGTTGATATGTTGACCGT 57.589 42.857 0.00 0.00 34.90 4.83
118 119 4.963276 ATTGTGGTTGATATGTTGACCG 57.037 40.909 0.00 0.00 34.90 4.79
128 129 8.413229 CCGATCCTTTTTAATATTGTGGTTGAT 58.587 33.333 0.00 0.00 0.00 2.57
129 130 7.394923 ACCGATCCTTTTTAATATTGTGGTTGA 59.605 33.333 0.00 0.00 0.00 3.18
130 131 7.487829 CACCGATCCTTTTTAATATTGTGGTTG 59.512 37.037 0.00 0.00 0.00 3.77
131 132 7.394923 TCACCGATCCTTTTTAATATTGTGGTT 59.605 33.333 0.00 0.00 0.00 3.67
132 133 6.887545 TCACCGATCCTTTTTAATATTGTGGT 59.112 34.615 0.00 0.00 0.00 4.16
133 134 7.148154 TGTCACCGATCCTTTTTAATATTGTGG 60.148 37.037 0.00 0.00 0.00 4.17
134 135 7.757526 TGTCACCGATCCTTTTTAATATTGTG 58.242 34.615 0.00 0.00 0.00 3.33
135 136 7.931578 TGTCACCGATCCTTTTTAATATTGT 57.068 32.000 0.00 0.00 0.00 2.71
136 137 7.862372 CCATGTCACCGATCCTTTTTAATATTG 59.138 37.037 0.00 0.00 0.00 1.90
137 138 7.014230 CCCATGTCACCGATCCTTTTTAATATT 59.986 37.037 0.00 0.00 0.00 1.28
138 139 6.490040 CCCATGTCACCGATCCTTTTTAATAT 59.510 38.462 0.00 0.00 0.00 1.28
139 140 5.825679 CCCATGTCACCGATCCTTTTTAATA 59.174 40.000 0.00 0.00 0.00 0.98
140 141 4.644685 CCCATGTCACCGATCCTTTTTAAT 59.355 41.667 0.00 0.00 0.00 1.40
141 142 4.013728 CCCATGTCACCGATCCTTTTTAA 58.986 43.478 0.00 0.00 0.00 1.52
142 143 3.264706 TCCCATGTCACCGATCCTTTTTA 59.735 43.478 0.00 0.00 0.00 1.52
143 144 2.041081 TCCCATGTCACCGATCCTTTTT 59.959 45.455 0.00 0.00 0.00 1.94
144 145 1.633432 TCCCATGTCACCGATCCTTTT 59.367 47.619 0.00 0.00 0.00 2.27
145 146 1.285280 TCCCATGTCACCGATCCTTT 58.715 50.000 0.00 0.00 0.00 3.11
146 147 1.417890 GATCCCATGTCACCGATCCTT 59.582 52.381 0.00 0.00 0.00 3.36
147 148 1.051812 GATCCCATGTCACCGATCCT 58.948 55.000 0.00 0.00 0.00 3.24
148 149 0.758734 TGATCCCATGTCACCGATCC 59.241 55.000 0.00 0.00 31.94 3.36
149 150 1.871080 GTGATCCCATGTCACCGATC 58.129 55.000 4.05 1.72 39.99 3.69
162 163 4.779993 AAGGATTAAGACAGGGTGATCC 57.220 45.455 0.00 0.00 34.62 3.36
178 179 9.860898 GTCATTACTTTCAAATGCTTAAAGGAT 57.139 29.630 0.00 0.00 35.09 3.24
179 180 8.303876 GGTCATTACTTTCAAATGCTTAAAGGA 58.696 33.333 0.00 0.00 35.09 3.36
180 181 8.087750 TGGTCATTACTTTCAAATGCTTAAAGG 58.912 33.333 0.00 0.00 35.09 3.11
181 182 9.474920 TTGGTCATTACTTTCAAATGCTTAAAG 57.525 29.630 0.00 0.00 34.89 1.85
182 183 9.995003 ATTGGTCATTACTTTCAAATGCTTAAA 57.005 25.926 0.00 0.00 34.89 1.52
185 186 9.807649 GATATTGGTCATTACTTTCAAATGCTT 57.192 29.630 0.00 0.00 34.89 3.91
186 187 8.131100 CGATATTGGTCATTACTTTCAAATGCT 58.869 33.333 0.00 0.00 34.89 3.79
187 188 7.915397 ACGATATTGGTCATTACTTTCAAATGC 59.085 33.333 0.00 0.00 34.89 3.56
188 189 9.438291 GACGATATTGGTCATTACTTTCAAATG 57.562 33.333 0.00 0.00 35.98 2.32
189 190 9.173021 TGACGATATTGGTCATTACTTTCAAAT 57.827 29.630 6.49 0.00 39.36 2.32
190 191 8.554835 TGACGATATTGGTCATTACTTTCAAA 57.445 30.769 6.49 0.00 39.36 2.69
203 204 9.052759 GGTATTGAAGTTAATGACGATATTGGT 57.947 33.333 0.00 0.00 0.00 3.67
204 205 9.051679 TGGTATTGAAGTTAATGACGATATTGG 57.948 33.333 0.00 0.00 0.00 3.16
207 208 8.761497 CGTTGGTATTGAAGTTAATGACGATAT 58.239 33.333 0.00 0.00 0.00 1.63
208 209 7.254185 GCGTTGGTATTGAAGTTAATGACGATA 60.254 37.037 0.00 0.00 0.00 2.92
209 210 6.456449 GCGTTGGTATTGAAGTTAATGACGAT 60.456 38.462 0.00 0.00 0.00 3.73
210 211 5.163933 GCGTTGGTATTGAAGTTAATGACGA 60.164 40.000 0.00 0.00 0.00 4.20
211 212 5.019498 GCGTTGGTATTGAAGTTAATGACG 58.981 41.667 0.00 0.00 0.00 4.35
212 213 6.178239 AGCGTTGGTATTGAAGTTAATGAC 57.822 37.500 0.00 0.00 0.00 3.06
213 214 6.314400 GGTAGCGTTGGTATTGAAGTTAATGA 59.686 38.462 0.00 0.00 0.00 2.57
214 215 6.315393 AGGTAGCGTTGGTATTGAAGTTAATG 59.685 38.462 0.00 0.00 0.00 1.90
215 216 6.412214 AGGTAGCGTTGGTATTGAAGTTAAT 58.588 36.000 0.00 0.00 0.00 1.40
216 217 5.797051 AGGTAGCGTTGGTATTGAAGTTAA 58.203 37.500 0.00 0.00 0.00 2.01
217 218 5.410355 AGGTAGCGTTGGTATTGAAGTTA 57.590 39.130 0.00 0.00 0.00 2.24
218 219 4.251268 GAGGTAGCGTTGGTATTGAAGTT 58.749 43.478 0.00 0.00 0.00 2.66
219 220 3.369157 GGAGGTAGCGTTGGTATTGAAGT 60.369 47.826 0.00 0.00 0.00 3.01
220 221 3.195661 GGAGGTAGCGTTGGTATTGAAG 58.804 50.000 0.00 0.00 0.00 3.02
221 222 2.093341 GGGAGGTAGCGTTGGTATTGAA 60.093 50.000 0.00 0.00 0.00 2.69
222 223 1.483415 GGGAGGTAGCGTTGGTATTGA 59.517 52.381 0.00 0.00 0.00 2.57
223 224 1.485066 AGGGAGGTAGCGTTGGTATTG 59.515 52.381 0.00 0.00 0.00 1.90
224 225 1.485066 CAGGGAGGTAGCGTTGGTATT 59.515 52.381 0.00 0.00 0.00 1.89
225 226 1.120530 CAGGGAGGTAGCGTTGGTAT 58.879 55.000 0.00 0.00 0.00 2.73
226 227 1.610554 GCAGGGAGGTAGCGTTGGTA 61.611 60.000 0.00 0.00 0.00 3.25
227 228 2.955881 GCAGGGAGGTAGCGTTGGT 61.956 63.158 0.00 0.00 0.00 3.67
228 229 2.125106 GCAGGGAGGTAGCGTTGG 60.125 66.667 0.00 0.00 0.00 3.77
229 230 1.741770 GTGCAGGGAGGTAGCGTTG 60.742 63.158 0.00 0.00 0.00 4.10
230 231 1.764571 TTGTGCAGGGAGGTAGCGTT 61.765 55.000 0.00 0.00 0.00 4.84
231 232 1.764571 TTTGTGCAGGGAGGTAGCGT 61.765 55.000 0.00 0.00 0.00 5.07
232 233 1.003839 TTTGTGCAGGGAGGTAGCG 60.004 57.895 0.00 0.00 0.00 4.26
233 234 0.678048 CCTTTGTGCAGGGAGGTAGC 60.678 60.000 0.00 0.00 0.00 3.58
234 235 0.984230 TCCTTTGTGCAGGGAGGTAG 59.016 55.000 8.55 0.00 34.24 3.18
235 236 1.668826 ATCCTTTGTGCAGGGAGGTA 58.331 50.000 8.55 0.00 34.24 3.08
236 237 0.779997 AATCCTTTGTGCAGGGAGGT 59.220 50.000 8.55 0.00 34.24 3.85
237 238 1.467920 GAATCCTTTGTGCAGGGAGG 58.532 55.000 0.00 0.00 34.24 4.30
238 239 1.089920 CGAATCCTTTGTGCAGGGAG 58.910 55.000 0.00 0.00 34.24 4.30
239 240 0.690192 TCGAATCCTTTGTGCAGGGA 59.310 50.000 0.00 0.00 34.24 4.20
240 241 0.804989 GTCGAATCCTTTGTGCAGGG 59.195 55.000 0.00 0.00 34.24 4.45
241 242 1.522668 TGTCGAATCCTTTGTGCAGG 58.477 50.000 0.00 0.00 34.86 4.85
242 243 2.485426 ACATGTCGAATCCTTTGTGCAG 59.515 45.455 0.00 0.00 0.00 4.41
243 244 2.503331 ACATGTCGAATCCTTTGTGCA 58.497 42.857 0.00 0.00 0.00 4.57
244 245 3.559238 AACATGTCGAATCCTTTGTGC 57.441 42.857 0.00 0.00 0.00 4.57
245 246 5.762045 AGAAAACATGTCGAATCCTTTGTG 58.238 37.500 0.00 0.00 0.00 3.33
246 247 5.048713 GGAGAAAACATGTCGAATCCTTTGT 60.049 40.000 0.00 0.00 0.00 2.83
247 248 5.048782 TGGAGAAAACATGTCGAATCCTTTG 60.049 40.000 16.53 0.00 0.00 2.77
248 249 5.070001 TGGAGAAAACATGTCGAATCCTTT 58.930 37.500 16.53 5.65 0.00 3.11
249 250 4.651778 TGGAGAAAACATGTCGAATCCTT 58.348 39.130 16.53 0.00 0.00 3.36
250 251 4.256920 CTGGAGAAAACATGTCGAATCCT 58.743 43.478 16.53 3.33 0.00 3.24
251 252 3.375299 CCTGGAGAAAACATGTCGAATCC 59.625 47.826 0.00 6.01 0.00 3.01
252 253 3.181506 GCCTGGAGAAAACATGTCGAATC 60.182 47.826 0.00 0.00 0.00 2.52
253 254 2.749621 GCCTGGAGAAAACATGTCGAAT 59.250 45.455 0.00 0.00 0.00 3.34
254 255 2.151202 GCCTGGAGAAAACATGTCGAA 58.849 47.619 0.00 0.00 0.00 3.71
255 256 1.347707 AGCCTGGAGAAAACATGTCGA 59.652 47.619 0.00 0.00 0.00 4.20
256 257 1.813513 AGCCTGGAGAAAACATGTCG 58.186 50.000 0.00 0.00 0.00 4.35
257 258 3.319122 ACAAAGCCTGGAGAAAACATGTC 59.681 43.478 0.00 0.00 0.00 3.06
258 259 3.299503 ACAAAGCCTGGAGAAAACATGT 58.700 40.909 0.00 0.00 0.00 3.21
259 260 3.318839 TGACAAAGCCTGGAGAAAACATG 59.681 43.478 0.00 0.00 0.00 3.21
260 261 3.565307 TGACAAAGCCTGGAGAAAACAT 58.435 40.909 0.00 0.00 0.00 2.71
261 262 3.011566 TGACAAAGCCTGGAGAAAACA 57.988 42.857 0.00 0.00 0.00 2.83
262 263 4.590850 ATTGACAAAGCCTGGAGAAAAC 57.409 40.909 0.00 0.00 0.00 2.43
263 264 4.039124 GGAATTGACAAAGCCTGGAGAAAA 59.961 41.667 0.00 0.00 0.00 2.29
264 265 3.573967 GGAATTGACAAAGCCTGGAGAAA 59.426 43.478 0.00 0.00 0.00 2.52
265 266 3.157087 GGAATTGACAAAGCCTGGAGAA 58.843 45.455 0.00 0.00 0.00 2.87
266 267 2.376518 AGGAATTGACAAAGCCTGGAGA 59.623 45.455 10.45 0.00 0.00 3.71
267 268 2.800250 AGGAATTGACAAAGCCTGGAG 58.200 47.619 10.45 0.00 0.00 3.86
268 269 2.978156 AGGAATTGACAAAGCCTGGA 57.022 45.000 10.45 0.00 0.00 3.86
269 270 3.321682 TGAAAGGAATTGACAAAGCCTGG 59.678 43.478 11.62 0.00 0.00 4.45
270 271 4.589216 TGAAAGGAATTGACAAAGCCTG 57.411 40.909 11.62 0.00 0.00 4.85
271 272 4.562143 GCATGAAAGGAATTGACAAAGCCT 60.562 41.667 0.00 6.42 0.00 4.58
272 273 3.681417 GCATGAAAGGAATTGACAAAGCC 59.319 43.478 0.00 0.00 0.00 4.35
273 274 3.365820 CGCATGAAAGGAATTGACAAAGC 59.634 43.478 0.00 0.00 0.00 3.51
274 275 3.365820 GCGCATGAAAGGAATTGACAAAG 59.634 43.478 0.30 0.00 0.00 2.77
275 276 3.243670 TGCGCATGAAAGGAATTGACAAA 60.244 39.130 5.66 0.00 0.00 2.83
276 277 2.295629 TGCGCATGAAAGGAATTGACAA 59.704 40.909 5.66 0.00 0.00 3.18
277 278 1.885233 TGCGCATGAAAGGAATTGACA 59.115 42.857 5.66 0.00 0.00 3.58
278 279 2.634982 TGCGCATGAAAGGAATTGAC 57.365 45.000 5.66 0.00 0.00 3.18
279 280 3.577667 CTTTGCGCATGAAAGGAATTGA 58.422 40.909 12.75 0.00 0.00 2.57
280 281 2.093152 GCTTTGCGCATGAAAGGAATTG 59.907 45.455 12.75 0.00 38.92 2.32
281 282 2.028748 AGCTTTGCGCATGAAAGGAATT 60.029 40.909 12.75 0.00 42.61 2.17
282 283 1.547372 AGCTTTGCGCATGAAAGGAAT 59.453 42.857 12.75 0.00 42.61 3.01
283 284 0.961019 AGCTTTGCGCATGAAAGGAA 59.039 45.000 12.75 0.00 42.61 3.36
284 285 0.961019 AAGCTTTGCGCATGAAAGGA 59.039 45.000 12.75 0.00 42.61 3.36
285 286 1.065358 CAAGCTTTGCGCATGAAAGG 58.935 50.000 12.75 0.00 39.61 3.11
286 287 1.774639 ACAAGCTTTGCGCATGAAAG 58.225 45.000 12.75 13.88 39.61 2.62
287 288 1.859703 CAACAAGCTTTGCGCATGAAA 59.140 42.857 12.75 0.79 39.61 2.69
288 289 1.489574 CAACAAGCTTTGCGCATGAA 58.510 45.000 12.75 1.71 39.61 2.57
289 290 0.940519 GCAACAAGCTTTGCGCATGA 60.941 50.000 12.75 1.62 42.38 3.07
290 291 1.489824 GCAACAAGCTTTGCGCATG 59.510 52.632 12.75 8.98 42.38 4.06
291 292 3.941035 GCAACAAGCTTTGCGCAT 58.059 50.000 12.75 0.00 42.38 4.73
310 311 0.037734 CCCCTCGTAGTGGCCTTTTT 59.962 55.000 3.32 0.00 40.32 1.94
311 312 1.131928 ACCCCTCGTAGTGGCCTTTT 61.132 55.000 3.32 0.00 40.32 2.27
312 313 1.538135 ACCCCTCGTAGTGGCCTTT 60.538 57.895 3.32 0.00 40.32 3.11
313 314 2.122056 ACCCCTCGTAGTGGCCTT 59.878 61.111 3.32 0.00 40.32 4.35
314 315 2.683933 CACCCCTCGTAGTGGCCT 60.684 66.667 3.32 0.00 40.32 5.19
315 316 4.468689 GCACCCCTCGTAGTGGCC 62.469 72.222 0.00 0.00 40.32 5.36
316 317 3.248446 TTGCACCCCTCGTAGTGGC 62.248 63.158 0.00 0.00 40.32 5.01
317 318 1.375523 GTTGCACCCCTCGTAGTGG 60.376 63.158 0.00 0.00 41.51 4.00
318 319 0.670546 CAGTTGCACCCCTCGTAGTG 60.671 60.000 0.00 0.00 37.05 2.74
319 320 1.671742 CAGTTGCACCCCTCGTAGT 59.328 57.895 0.00 0.00 0.00 2.73
320 321 1.079127 CCAGTTGCACCCCTCGTAG 60.079 63.158 0.00 0.00 0.00 3.51
323 324 1.002134 AATCCAGTTGCACCCCTCG 60.002 57.895 0.00 0.00 0.00 4.63
335 336 4.002982 TCGGTCACAAAATCTCAATCCAG 58.997 43.478 0.00 0.00 0.00 3.86
422 424 3.596214 TCTTCTGTAAGCCCGATTGTTC 58.404 45.455 0.00 0.00 32.36 3.18
440 442 2.304092 GTTTTGACCCGGTTCCTTCTT 58.696 47.619 0.00 0.00 0.00 2.52
468 470 2.303600 TGTTTCCATAACTGTAGCCGGT 59.696 45.455 1.90 0.00 0.00 5.28
512 514 5.838521 AGATAACTTTTGGGTTTGGACATGT 59.161 36.000 0.00 0.00 0.00 3.21
515 517 5.701224 AGAGATAACTTTTGGGTTTGGACA 58.299 37.500 0.00 0.00 0.00 4.02
519 521 7.716612 AGTGAAAGAGATAACTTTTGGGTTTG 58.283 34.615 0.00 0.00 39.71 2.93
530 532 5.446473 CGCATGGTGAAGTGAAAGAGATAAC 60.446 44.000 0.00 0.00 0.00 1.89
553 555 0.875728 TGTTTTACCATTGCGGACCG 59.124 50.000 10.29 10.29 38.63 4.79
578 585 2.241941 TGCCCATCCATCAGTACACAAT 59.758 45.455 0.00 0.00 0.00 2.71
582 589 1.915489 ACTTGCCCATCCATCAGTACA 59.085 47.619 0.00 0.00 0.00 2.90
612 619 2.870411 GTGTGTTTTCTTACCTCTGCGT 59.130 45.455 0.00 0.00 0.00 5.24
638 645 3.804325 CAGTAGCTCGGTGGATGTAAATG 59.196 47.826 0.00 0.00 0.00 2.32
639 646 3.451178 ACAGTAGCTCGGTGGATGTAAAT 59.549 43.478 0.00 0.00 0.00 1.40
640 647 2.829720 ACAGTAGCTCGGTGGATGTAAA 59.170 45.455 0.00 0.00 0.00 2.01
641 648 2.165641 CACAGTAGCTCGGTGGATGTAA 59.834 50.000 0.00 0.00 38.29 2.41
642 649 1.749063 CACAGTAGCTCGGTGGATGTA 59.251 52.381 0.00 0.00 38.29 2.29
643 650 0.532573 CACAGTAGCTCGGTGGATGT 59.467 55.000 0.00 0.00 38.29 3.06
644 651 0.532573 ACACAGTAGCTCGGTGGATG 59.467 55.000 16.21 1.17 44.32 3.51
645 652 1.204941 GAACACAGTAGCTCGGTGGAT 59.795 52.381 16.21 8.21 44.32 3.41
646 653 0.601558 GAACACAGTAGCTCGGTGGA 59.398 55.000 16.21 0.00 44.32 4.02
647 654 0.317160 TGAACACAGTAGCTCGGTGG 59.683 55.000 16.21 0.00 44.32 4.61
648 655 1.269569 TGTGAACACAGTAGCTCGGTG 60.270 52.381 3.39 12.34 45.24 4.94
649 656 1.037493 TGTGAACACAGTAGCTCGGT 58.963 50.000 3.39 0.00 36.21 4.69
650 657 2.061773 CTTGTGAACACAGTAGCTCGG 58.938 52.381 7.67 0.00 42.94 4.63
651 658 3.013276 TCTTGTGAACACAGTAGCTCG 57.987 47.619 7.67 0.00 42.94 5.03
652 659 5.734855 TTTTCTTGTGAACACAGTAGCTC 57.265 39.130 7.67 0.00 42.94 4.09
674 681 3.058501 CGGCTCGGTGAATGTAACTTTTT 60.059 43.478 0.00 0.00 0.00 1.94
675 682 2.482721 CGGCTCGGTGAATGTAACTTTT 59.517 45.455 0.00 0.00 0.00 2.27
676 683 2.073816 CGGCTCGGTGAATGTAACTTT 58.926 47.619 0.00 0.00 0.00 2.66
677 684 1.674817 CCGGCTCGGTGAATGTAACTT 60.675 52.381 5.56 0.00 42.73 2.66
678 685 0.108329 CCGGCTCGGTGAATGTAACT 60.108 55.000 5.56 0.00 42.73 2.24
679 686 1.087771 CCCGGCTCGGTGAATGTAAC 61.088 60.000 11.85 0.00 46.80 2.50
680 687 1.219664 CCCGGCTCGGTGAATGTAA 59.780 57.895 11.85 0.00 46.80 2.41
681 688 1.672854 CTCCCGGCTCGGTGAATGTA 61.673 60.000 11.85 0.00 46.80 2.29
682 689 3.000819 TCCCGGCTCGGTGAATGT 61.001 61.111 11.85 0.00 46.80 2.71
683 690 2.202932 CTCCCGGCTCGGTGAATG 60.203 66.667 11.85 0.00 46.80 2.67
684 691 3.470888 CCTCCCGGCTCGGTGAAT 61.471 66.667 11.85 0.00 46.80 2.57
690 697 4.468689 GTTTCCCCTCCCGGCTCG 62.469 72.222 0.00 0.00 0.00 5.03
691 698 2.420466 TTTGTTTCCCCTCCCGGCTC 62.420 60.000 0.00 0.00 0.00 4.70
692 699 2.426305 CTTTGTTTCCCCTCCCGGCT 62.426 60.000 0.00 0.00 0.00 5.52
693 700 1.977009 CTTTGTTTCCCCTCCCGGC 60.977 63.158 0.00 0.00 0.00 6.13
694 701 1.977009 GCTTTGTTTCCCCTCCCGG 60.977 63.158 0.00 0.00 0.00 5.73
695 702 1.977009 GGCTTTGTTTCCCCTCCCG 60.977 63.158 0.00 0.00 0.00 5.14
696 703 1.977009 CGGCTTTGTTTCCCCTCCC 60.977 63.158 0.00 0.00 0.00 4.30
697 704 1.977009 CCGGCTTTGTTTCCCCTCC 60.977 63.158 0.00 0.00 0.00 4.30
698 705 0.960861 CTCCGGCTTTGTTTCCCCTC 60.961 60.000 0.00 0.00 0.00 4.30
699 706 1.074951 CTCCGGCTTTGTTTCCCCT 59.925 57.895 0.00 0.00 0.00 4.79
700 707 2.636412 GCTCCGGCTTTGTTTCCCC 61.636 63.158 0.00 0.00 35.22 4.81
701 708 2.962569 GCTCCGGCTTTGTTTCCC 59.037 61.111 0.00 0.00 35.22 3.97
702 709 2.561373 CGCTCCGGCTTTGTTTCC 59.439 61.111 0.00 0.00 36.09 3.13
703 710 2.126850 GCGCTCCGGCTTTGTTTC 60.127 61.111 0.00 0.00 36.09 2.78
704 711 2.594592 AGCGCTCCGGCTTTGTTT 60.595 55.556 2.64 0.00 41.39 2.83
705 712 3.050275 GAGCGCTCCGGCTTTGTT 61.050 61.111 27.22 0.00 44.93 2.83
719 726 1.090052 AGAATAGCAAACGCCGGAGC 61.090 55.000 5.05 0.00 0.00 4.70
720 727 1.369625 AAGAATAGCAAACGCCGGAG 58.630 50.000 5.05 3.72 0.00 4.63
721 728 2.546778 CTAAGAATAGCAAACGCCGGA 58.453 47.619 5.05 0.00 0.00 5.14
732 739 7.652105 TGCATTTAGTAACCTCGCTAAGAATAG 59.348 37.037 0.00 0.00 0.00 1.73
733 740 7.494211 TGCATTTAGTAACCTCGCTAAGAATA 58.506 34.615 0.00 0.00 0.00 1.75
734 741 6.346096 TGCATTTAGTAACCTCGCTAAGAAT 58.654 36.000 0.00 0.00 0.00 2.40
735 742 5.726397 TGCATTTAGTAACCTCGCTAAGAA 58.274 37.500 0.00 0.00 0.00 2.52
736 743 5.333299 TGCATTTAGTAACCTCGCTAAGA 57.667 39.130 0.00 0.00 0.00 2.10
737 744 4.025647 GCTGCATTTAGTAACCTCGCTAAG 60.026 45.833 0.00 0.00 0.00 2.18
738 745 3.869246 GCTGCATTTAGTAACCTCGCTAA 59.131 43.478 0.00 0.00 0.00 3.09
739 746 3.454375 GCTGCATTTAGTAACCTCGCTA 58.546 45.455 0.00 0.00 0.00 4.26
740 747 2.280628 GCTGCATTTAGTAACCTCGCT 58.719 47.619 0.00 0.00 0.00 4.93
741 748 1.004927 CGCTGCATTTAGTAACCTCGC 60.005 52.381 0.00 0.00 0.00 5.03
742 749 2.536365 TCGCTGCATTTAGTAACCTCG 58.464 47.619 0.00 0.00 0.00 4.63
743 750 4.570772 TGAATCGCTGCATTTAGTAACCTC 59.429 41.667 0.00 0.00 0.00 3.85
744 751 4.513442 TGAATCGCTGCATTTAGTAACCT 58.487 39.130 0.00 0.00 0.00 3.50
745 752 4.875544 TGAATCGCTGCATTTAGTAACC 57.124 40.909 0.00 0.00 0.00 2.85
746 753 5.133264 CGATGAATCGCTGCATTTAGTAAC 58.867 41.667 0.00 0.00 43.84 2.50
747 754 5.328886 CGATGAATCGCTGCATTTAGTAA 57.671 39.130 0.00 0.00 43.84 2.24
748 755 4.972286 CGATGAATCGCTGCATTTAGTA 57.028 40.909 0.00 0.00 43.84 1.82
749 756 3.867055 CGATGAATCGCTGCATTTAGT 57.133 42.857 0.00 0.00 43.84 2.24
761 768 8.916654 ACGAATCTACATTAATGACGATGAATC 58.083 33.333 22.16 13.92 0.00 2.52
762 769 8.818141 ACGAATCTACATTAATGACGATGAAT 57.182 30.769 22.16 7.93 0.00 2.57
763 770 8.642908 AACGAATCTACATTAATGACGATGAA 57.357 30.769 22.16 0.98 0.00 2.57
764 771 9.177304 GTAACGAATCTACATTAATGACGATGA 57.823 33.333 22.16 11.44 0.00 2.92
765 772 8.425491 GGTAACGAATCTACATTAATGACGATG 58.575 37.037 22.16 12.62 0.00 3.84
766 773 7.597743 GGGTAACGAATCTACATTAATGACGAT 59.402 37.037 22.16 17.42 37.60 3.73
767 774 6.919662 GGGTAACGAATCTACATTAATGACGA 59.080 38.462 22.16 16.08 37.60 4.20
768 775 6.921857 AGGGTAACGAATCTACATTAATGACG 59.078 38.462 22.16 16.49 37.60 4.35
769 776 8.548721 CAAGGGTAACGAATCTACATTAATGAC 58.451 37.037 22.16 5.38 37.60 3.06
770 777 8.262227 ACAAGGGTAACGAATCTACATTAATGA 58.738 33.333 22.16 5.10 37.60 2.57
771 778 8.335356 CACAAGGGTAACGAATCTACATTAATG 58.665 37.037 14.01 14.01 37.60 1.90
772 779 8.262227 TCACAAGGGTAACGAATCTACATTAAT 58.738 33.333 0.00 0.00 37.60 1.40
773 780 7.546667 GTCACAAGGGTAACGAATCTACATTAA 59.453 37.037 0.00 0.00 37.60 1.40
774 781 7.037438 GTCACAAGGGTAACGAATCTACATTA 58.963 38.462 0.00 0.00 37.60 1.90
775 782 5.873164 GTCACAAGGGTAACGAATCTACATT 59.127 40.000 0.00 0.00 37.60 2.71
776 783 5.187186 AGTCACAAGGGTAACGAATCTACAT 59.813 40.000 0.00 0.00 37.60 2.29
777 784 4.525487 AGTCACAAGGGTAACGAATCTACA 59.475 41.667 0.00 0.00 37.60 2.74
778 785 5.069501 AGTCACAAGGGTAACGAATCTAC 57.930 43.478 0.00 0.00 37.60 2.59
779 786 5.244402 TGAAGTCACAAGGGTAACGAATCTA 59.756 40.000 0.00 0.00 37.60 1.98
780 787 4.039973 TGAAGTCACAAGGGTAACGAATCT 59.960 41.667 0.00 0.00 37.60 2.40
781 788 4.312443 TGAAGTCACAAGGGTAACGAATC 58.688 43.478 0.00 0.00 37.60 2.52
782 789 4.345859 TGAAGTCACAAGGGTAACGAAT 57.654 40.909 0.00 0.00 37.60 3.34
783 790 3.823281 TGAAGTCACAAGGGTAACGAA 57.177 42.857 0.00 0.00 37.60 3.85
784 791 3.823281 TTGAAGTCACAAGGGTAACGA 57.177 42.857 0.00 0.00 37.60 3.85
785 792 4.886247 TTTTGAAGTCACAAGGGTAACG 57.114 40.909 0.00 0.00 37.60 3.18
805 812 5.720202 AGTTCAAAAGAAAGCTCGGTTTTT 58.280 33.333 0.00 0.00 0.00 1.94
806 813 5.324784 AGTTCAAAAGAAAGCTCGGTTTT 57.675 34.783 0.00 0.00 0.00 2.43
807 814 4.983671 AGTTCAAAAGAAAGCTCGGTTT 57.016 36.364 0.00 0.00 0.00 3.27
808 815 4.025145 CGTAGTTCAAAAGAAAGCTCGGTT 60.025 41.667 0.00 0.00 0.00 4.44
809 816 3.493503 CGTAGTTCAAAAGAAAGCTCGGT 59.506 43.478 0.00 0.00 0.00 4.69
810 817 3.120649 CCGTAGTTCAAAAGAAAGCTCGG 60.121 47.826 0.00 0.00 0.00 4.63
811 818 3.664537 GCCGTAGTTCAAAAGAAAGCTCG 60.665 47.826 0.00 0.00 0.00 5.03
812 819 3.365064 GGCCGTAGTTCAAAAGAAAGCTC 60.365 47.826 0.00 0.00 0.00 4.09
813 820 2.552743 GGCCGTAGTTCAAAAGAAAGCT 59.447 45.455 0.00 0.00 0.00 3.74
814 821 2.292292 TGGCCGTAGTTCAAAAGAAAGC 59.708 45.455 0.00 0.00 0.00 3.51
815 822 3.564225 AGTGGCCGTAGTTCAAAAGAAAG 59.436 43.478 0.00 0.00 0.00 2.62
816 823 3.547746 AGTGGCCGTAGTTCAAAAGAAA 58.452 40.909 0.00 0.00 0.00 2.52
817 824 3.135994 GAGTGGCCGTAGTTCAAAAGAA 58.864 45.455 0.00 0.00 0.00 2.52
818 825 2.367567 AGAGTGGCCGTAGTTCAAAAGA 59.632 45.455 0.00 0.00 0.00 2.52
819 826 2.767505 AGAGTGGCCGTAGTTCAAAAG 58.232 47.619 0.00 0.00 0.00 2.27
820 827 2.922740 AGAGTGGCCGTAGTTCAAAA 57.077 45.000 0.00 0.00 0.00 2.44
821 828 2.922740 AAGAGTGGCCGTAGTTCAAA 57.077 45.000 0.00 0.00 0.00 2.69
822 829 2.367567 AGAAAGAGTGGCCGTAGTTCAA 59.632 45.455 0.00 0.00 0.00 2.69
823 830 1.968493 AGAAAGAGTGGCCGTAGTTCA 59.032 47.619 0.00 0.00 0.00 3.18
824 831 2.029290 TGAGAAAGAGTGGCCGTAGTTC 60.029 50.000 0.00 0.00 0.00 3.01
825 832 1.968493 TGAGAAAGAGTGGCCGTAGTT 59.032 47.619 0.00 0.00 0.00 2.24
826 833 1.272769 GTGAGAAAGAGTGGCCGTAGT 59.727 52.381 0.00 0.00 0.00 2.73
827 834 1.546476 AGTGAGAAAGAGTGGCCGTAG 59.454 52.381 0.00 0.00 0.00 3.51
828 835 1.544691 GAGTGAGAAAGAGTGGCCGTA 59.455 52.381 0.00 0.00 0.00 4.02
829 836 0.318762 GAGTGAGAAAGAGTGGCCGT 59.681 55.000 0.00 0.00 0.00 5.68
830 837 0.390472 GGAGTGAGAAAGAGTGGCCG 60.390 60.000 0.00 0.00 0.00 6.13
831 838 0.035915 GGGAGTGAGAAAGAGTGGCC 60.036 60.000 0.00 0.00 0.00 5.36
832 839 0.687354 TGGGAGTGAGAAAGAGTGGC 59.313 55.000 0.00 0.00 0.00 5.01
833 840 2.093235 GGATGGGAGTGAGAAAGAGTGG 60.093 54.545 0.00 0.00 0.00 4.00
834 841 2.836981 AGGATGGGAGTGAGAAAGAGTG 59.163 50.000 0.00 0.00 0.00 3.51
835 842 3.103742 GAGGATGGGAGTGAGAAAGAGT 58.896 50.000 0.00 0.00 0.00 3.24
836 843 3.373830 AGAGGATGGGAGTGAGAAAGAG 58.626 50.000 0.00 0.00 0.00 2.85
837 844 3.245766 TGAGAGGATGGGAGTGAGAAAGA 60.246 47.826 0.00 0.00 0.00 2.52
838 845 3.102972 TGAGAGGATGGGAGTGAGAAAG 58.897 50.000 0.00 0.00 0.00 2.62
839 846 3.190383 TGAGAGGATGGGAGTGAGAAA 57.810 47.619 0.00 0.00 0.00 2.52
840 847 2.928036 TGAGAGGATGGGAGTGAGAA 57.072 50.000 0.00 0.00 0.00 2.87
841 848 2.625352 CCTTGAGAGGATGGGAGTGAGA 60.625 54.545 0.00 0.00 46.74 3.27
842 849 1.761784 CCTTGAGAGGATGGGAGTGAG 59.238 57.143 0.00 0.00 46.74 3.51
843 850 1.871418 CCTTGAGAGGATGGGAGTGA 58.129 55.000 0.00 0.00 46.74 3.41
853 860 1.381327 TAGCGGGGTCCTTGAGAGG 60.381 63.158 0.00 0.00 45.02 3.69
854 861 1.677637 GGTAGCGGGGTCCTTGAGAG 61.678 65.000 0.00 0.00 0.00 3.20
855 862 1.684734 GGTAGCGGGGTCCTTGAGA 60.685 63.158 0.00 0.00 0.00 3.27
856 863 2.901042 GGTAGCGGGGTCCTTGAG 59.099 66.667 0.00 0.00 0.00 3.02
857 864 3.072468 CGGTAGCGGGGTCCTTGA 61.072 66.667 6.39 0.00 0.00 3.02
858 865 4.832608 GCGGTAGCGGGGTCCTTG 62.833 72.222 17.08 0.00 0.00 3.61
868 875 1.226717 CTCTGGAAGTCGCGGTAGC 60.227 63.158 6.13 0.00 35.88 3.58
869 876 0.099082 GACTCTGGAAGTCGCGGTAG 59.901 60.000 6.13 0.00 44.79 3.18
870 877 2.177950 GACTCTGGAAGTCGCGGTA 58.822 57.895 6.13 0.00 44.79 4.02
1073 1080 3.891817 CCCATGCGGAGAGGGTAT 58.108 61.111 8.83 0.00 37.81 2.73
1097 1104 2.750350 CGAGGGTTTGAGCTGGGT 59.250 61.111 0.00 0.00 0.00 4.51
1193 1200 1.068588 TGAATCCGAGGAAGGCGTATG 59.931 52.381 0.00 0.00 0.00 2.39
1245 1252 2.668212 TCGCGACCCTGCAAAAGG 60.668 61.111 3.71 0.00 46.94 3.11
1301 1308 1.080974 CGCTTCAAGCAGCCCTTTG 60.081 57.895 10.73 0.00 42.58 2.77
1489 1505 2.558286 GGACACGGGTCTGACGACA 61.558 63.158 18.98 0.00 43.77 4.35
1810 1847 3.970410 CACCAAGGGGGCTGCTGA 61.970 66.667 0.00 0.00 42.05 4.26
1821 1858 0.520404 GCACATGAGAGCACACCAAG 59.480 55.000 0.00 0.00 0.00 3.61
2014 2051 4.101741 CCTACCTGATGTTTCCTCCTTAGG 59.898 50.000 0.00 0.00 45.21 2.69
2080 2117 3.734735 GTCCTCTTGTACTCAACGACAAC 59.265 47.826 0.00 0.00 32.31 3.32
2162 2199 2.418334 GCTCTACTCCTTAAACCACCGG 60.418 54.545 0.00 0.00 0.00 5.28
2233 2270 1.141185 GGTCCCCTCCTATTTCCCAG 58.859 60.000 0.00 0.00 0.00 4.45
2289 2326 7.904558 TTCTTCCTCTATAGAAGATGCAAGA 57.095 36.000 3.57 0.68 46.77 3.02
2468 2505 1.475034 CCTTAGCGCTGCCATTCCTTA 60.475 52.381 22.90 0.00 0.00 2.69
2809 2848 1.304547 CCTGAGTCCCACCGTCTCT 60.305 63.158 0.00 0.00 0.00 3.10
3077 3116 1.204146 TCAGCCTTGGAGGTGGTATC 58.796 55.000 0.00 0.00 37.80 2.24
3100 3139 2.103094 TGCTTCTACATCCCCATCTTCG 59.897 50.000 0.00 0.00 0.00 3.79
3369 3408 4.617253 TGTAGACTAACATTGGCACACT 57.383 40.909 0.00 0.00 39.29 3.55
3450 3489 3.585862 GGCGACAAGAGAATACTCAACA 58.414 45.455 0.00 0.00 44.79 3.33
3559 3598 3.087031 TCCTACAGGTTACTCCTCAACG 58.913 50.000 0.00 0.00 46.24 4.10
3617 3665 7.636150 AACATCTTAATGGGTTTCAGATCAG 57.364 36.000 0.00 0.00 37.19 2.90
3704 3752 7.579761 TGCATAACCAGTGCATTCATAAATA 57.420 32.000 0.00 0.00 46.76 1.40
3962 4650 0.908198 GGGATCTGCCTCTGTCAAGT 59.092 55.000 0.00 0.00 36.66 3.16
4141 4829 2.897326 GAGAAAGAGATAGGGAGGAGGC 59.103 54.545 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.