Multiple sequence alignment - TraesCS5B01G118100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G118100 chr5B 100.000 6845 0 0 428 7272 208643145 208649989 0.000000e+00 12641.0
1 TraesCS5B01G118100 chr5B 100.000 179 0 0 1 179 208642718 208642896 1.510000e-86 331.0
2 TraesCS5B01G118100 chr5A 94.259 2996 82 18 1867 4851 219929733 219926817 0.000000e+00 4497.0
3 TraesCS5B01G118100 chr5A 94.171 1098 41 13 768 1849 219931463 219930373 0.000000e+00 1652.0
4 TraesCS5B01G118100 chr5A 95.799 976 28 9 5500 6471 219926373 219925407 0.000000e+00 1563.0
5 TraesCS5B01G118100 chr5A 93.224 428 19 6 6848 7272 219829002 219828582 8.010000e-174 621.0
6 TraesCS5B01G118100 chr5A 91.000 400 23 3 6461 6848 219924042 219923644 1.800000e-145 527.0
7 TraesCS5B01G118100 chr5A 94.624 279 10 2 5098 5372 219926817 219926540 1.870000e-115 427.0
8 TraesCS5B01G118100 chr5D 90.805 1305 63 15 3550 4848 203079234 203077981 0.000000e+00 1692.0
9 TraesCS5B01G118100 chr5D 93.846 1105 36 9 724 1819 203083684 203082603 0.000000e+00 1635.0
10 TraesCS5B01G118100 chr5D 94.301 930 35 5 1950 2863 203082377 203081450 0.000000e+00 1408.0
11 TraesCS5B01G118100 chr5D 96.081 791 21 6 5500 6287 203076420 203075637 0.000000e+00 1280.0
12 TraesCS5B01G118100 chr5D 93.625 502 25 4 3066 3561 203079899 203079399 0.000000e+00 743.0
13 TraesCS5B01G118100 chr5D 93.243 296 8 1 6527 6810 203074598 203074303 6.740000e-115 425.0
14 TraesCS5B01G118100 chr5D 92.053 302 18 3 6972 7272 203066412 203066116 3.140000e-113 420.0
15 TraesCS5B01G118100 chr5D 91.852 270 21 1 5011 5280 203077277 203077009 6.890000e-100 375.0
16 TraesCS5B01G118100 chr5D 95.745 141 6 0 6394 6534 203075572 203075432 2.040000e-55 228.0
17 TraesCS5B01G118100 chr5D 95.489 133 4 2 6847 6979 203067592 203067462 2.060000e-50 211.0
18 TraesCS5B01G118100 chr5D 96.721 122 4 0 2848 2969 203080015 203079894 3.440000e-48 204.0
19 TraesCS5B01G118100 chr7B 99.329 298 2 0 428 725 198946776 198946479 2.310000e-149 540.0
20 TraesCS5B01G118100 chr7B 100.000 179 0 0 1 179 198947130 198946952 1.510000e-86 331.0
21 TraesCS5B01G118100 chr7B 100.000 179 0 0 1 179 198957109 198956931 1.510000e-86 331.0
22 TraesCS5B01G118100 chr1B 98.658 298 4 0 428 725 457949426 457949723 5.000000e-146 529.0
23 TraesCS5B01G118100 chr1B 98.324 179 3 0 1 179 457948528 457948706 1.520000e-81 315.0
24 TraesCS5B01G118100 chrUn 98.007 301 4 2 428 727 82916033 82916332 8.360000e-144 521.0
25 TraesCS5B01G118100 chr2B 98.305 295 5 0 431 725 672098525 672098819 1.080000e-142 518.0
26 TraesCS5B01G118100 chr2B 98.305 295 4 1 432 725 741979753 741980047 3.890000e-142 516.0
27 TraesCS5B01G118100 chr2B 95.318 299 13 1 428 725 237755457 237755755 2.370000e-129 473.0
28 TraesCS5B01G118100 chr2B 100.000 179 0 0 1 179 672098194 672098372 1.510000e-86 331.0
29 TraesCS5B01G118100 chr2B 100.000 179 0 0 1 179 741979177 741979355 1.510000e-86 331.0
30 TraesCS5B01G118100 chr2B 99.408 169 1 0 1 169 672088225 672088393 2.550000e-79 307.0
31 TraesCS5B01G118100 chr2B 96.648 179 6 0 1 179 237754395 237754573 1.530000e-76 298.0
32 TraesCS5B01G118100 chr4B 96.980 298 9 0 428 725 605827791 605828088 1.090000e-137 501.0
33 TraesCS5B01G118100 chr2A 95.349 301 13 1 428 727 575697657 575697957 1.840000e-130 477.0
34 TraesCS5B01G118100 chr2A 97.207 179 5 0 1 179 575696849 575697027 3.300000e-78 303.0
35 TraesCS5B01G118100 chr3A 95.318 299 13 1 428 725 577242195 577242493 2.370000e-129 473.0
36 TraesCS5B01G118100 chr7A 100.000 179 0 0 1 179 110065661 110065839 1.510000e-86 331.0
37 TraesCS5B01G118100 chr6A 90.698 43 4 0 4299 4341 23399363 23399405 2.830000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G118100 chr5B 208642718 208649989 7271 False 6486.000000 12641 100.000000 1 7272 2 chr5B.!!$F1 7271
1 TraesCS5B01G118100 chr5A 219923644 219931463 7819 True 1733.200000 4497 93.970600 768 6848 5 chr5A.!!$R2 6080
2 TraesCS5B01G118100 chr5D 203074303 203083684 9381 True 887.777778 1692 94.024333 724 6810 9 chr5D.!!$R2 6086
3 TraesCS5B01G118100 chr5D 203066116 203067592 1476 True 315.500000 420 93.771000 6847 7272 2 chr5D.!!$R1 425
4 TraesCS5B01G118100 chr7B 198946479 198947130 651 True 435.500000 540 99.664500 1 725 2 chr7B.!!$R2 724
5 TraesCS5B01G118100 chr1B 457948528 457949723 1195 False 422.000000 529 98.491000 1 725 2 chr1B.!!$F1 724
6 TraesCS5B01G118100 chr2B 672098194 672098819 625 False 424.500000 518 99.152500 1 725 2 chr2B.!!$F3 724
7 TraesCS5B01G118100 chr2B 741979177 741980047 870 False 423.500000 516 99.152500 1 725 2 chr2B.!!$F4 724
8 TraesCS5B01G118100 chr2B 237754395 237755755 1360 False 385.500000 473 95.983000 1 725 2 chr2B.!!$F2 724
9 TraesCS5B01G118100 chr2A 575696849 575697957 1108 False 390.000000 477 96.278000 1 727 2 chr2A.!!$F1 726

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
886 1533 0.678048 GCAGCCTACCAAAGTCAGGG 60.678 60.000 0.00 0.00 0.00 4.45 F
1548 2206 1.202604 TCGTTAATGATTCGAGGGGGC 60.203 52.381 0.00 0.00 0.00 5.80 F
3034 5779 0.387622 CCAATGAGGTTGCGTTGCTG 60.388 55.000 0.00 0.00 36.46 4.41 F
3963 6917 0.032615 AGAATCCGAGAGAGGGCTGT 60.033 55.000 0.00 0.00 0.00 4.40 F
5380 8882 0.038166 GACCCTGGTCATGAGCCAAA 59.962 55.000 21.58 2.88 44.02 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 2345 0.320697 GCCGTTCCTCTTGTACCTGT 59.679 55.0 0.00 0.0 0.00 4.00 R
3363 6112 0.035630 AGAAGTGCCATCACCAGCTC 60.036 55.0 0.00 0.0 44.16 4.09 R
4886 7843 0.103937 GAGCCATGACGAGAAGGAGG 59.896 60.0 0.00 0.0 0.00 4.30 R
5403 8905 0.026803 GCATGCTTCGTCATCGTTCC 59.973 55.0 11.37 0.0 38.33 3.62 R
7217 14395 0.179015 TTGCGGTTTCAGCTGGGTTA 60.179 50.0 15.13 0.0 35.28 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
712 1350 2.038863 TGAGGGTTTGAGGGCTCTAA 57.961 50.000 0.00 0.00 0.00 2.10
729 1367 7.511028 AGGGCTCTAATAGTAATGCTCTAACTT 59.489 37.037 0.00 0.00 28.59 2.66
730 1368 7.600752 GGGCTCTAATAGTAATGCTCTAACTTG 59.399 40.741 0.00 0.00 0.00 3.16
733 1371 9.190858 CTCTAATAGTAATGCTCTAACTTGCAG 57.809 37.037 0.00 0.00 42.74 4.41
736 1374 8.430801 AATAGTAATGCTCTAACTTGCAGAAG 57.569 34.615 0.00 0.00 42.74 2.85
780 1420 2.479566 TGGGACAGAGCTGCTTTAAG 57.520 50.000 2.53 0.00 0.00 1.85
794 1434 6.766084 GCTGCTTTAAGCTTCGTATATATGG 58.234 40.000 18.20 0.00 42.97 2.74
795 1435 6.183360 GCTGCTTTAAGCTTCGTATATATGGG 60.183 42.308 18.20 0.00 42.97 4.00
796 1436 5.642063 TGCTTTAAGCTTCGTATATATGGGC 59.358 40.000 18.20 7.26 42.97 5.36
797 1437 5.875359 GCTTTAAGCTTCGTATATATGGGCT 59.125 40.000 10.01 13.69 38.45 5.19
830 1470 2.890945 ACAGCCCAGACAACCAAATAAC 59.109 45.455 0.00 0.00 0.00 1.89
831 1471 3.157087 CAGCCCAGACAACCAAATAACT 58.843 45.455 0.00 0.00 0.00 2.24
849 1489 7.827819 AATAACTCGATTTCATTCAAGACGA 57.172 32.000 0.00 0.00 0.00 4.20
886 1533 0.678048 GCAGCCTACCAAAGTCAGGG 60.678 60.000 0.00 0.00 0.00 4.45
1263 1913 7.625469 TCTAATCTCTTCCCTTTCCTTCTTTC 58.375 38.462 0.00 0.00 0.00 2.62
1434 2087 1.605712 GCGATATCTGGGGTTCCTTCG 60.606 57.143 0.34 0.00 0.00 3.79
1548 2206 1.202604 TCGTTAATGATTCGAGGGGGC 60.203 52.381 0.00 0.00 0.00 5.80
1583 2241 2.917971 CGACTTGAGCCTTCGTTCTAAG 59.082 50.000 0.00 0.00 0.00 2.18
1584 2242 3.366070 CGACTTGAGCCTTCGTTCTAAGA 60.366 47.826 0.00 0.00 0.00 2.10
1643 2301 1.992557 TGTGGATTCCCCTAGCACTTT 59.007 47.619 0.00 0.00 35.38 2.66
1854 2512 3.009033 TGAAGGTAATCAACTGACAGGGG 59.991 47.826 7.51 0.00 0.00 4.79
1855 2513 1.916181 AGGTAATCAACTGACAGGGGG 59.084 52.381 7.51 0.00 0.00 5.40
1886 3166 2.163818 TGGTCTACAAAGCACTTCGG 57.836 50.000 0.00 0.00 0.00 4.30
1906 3186 2.699321 GGGGACTAATCGCTAGAAACCT 59.301 50.000 0.00 0.00 37.90 3.50
1907 3187 3.134262 GGGGACTAATCGCTAGAAACCTT 59.866 47.826 0.00 0.00 37.90 3.50
1908 3188 4.383880 GGGGACTAATCGCTAGAAACCTTT 60.384 45.833 0.00 0.00 37.90 3.11
1909 3189 5.163374 GGGGACTAATCGCTAGAAACCTTTA 60.163 44.000 0.00 0.00 37.90 1.85
1910 3190 5.984323 GGGACTAATCGCTAGAAACCTTTAG 59.016 44.000 0.00 0.00 34.96 1.85
1911 3191 5.984323 GGACTAATCGCTAGAAACCTTTAGG 59.016 44.000 0.00 0.00 42.17 2.69
1912 3192 6.183360 GGACTAATCGCTAGAAACCTTTAGGA 60.183 42.308 2.06 0.00 38.94 2.94
1913 3193 7.362802 ACTAATCGCTAGAAACCTTTAGGAT 57.637 36.000 2.06 0.00 38.94 3.24
1914 3194 7.793036 ACTAATCGCTAGAAACCTTTAGGATT 58.207 34.615 2.06 0.00 38.94 3.01
1925 3205 5.151297 ACCTTTAGGATTGCATGGTTTTG 57.849 39.130 2.06 0.00 38.94 2.44
1937 3217 2.611225 TGGTTTTGTTGGCATTCACC 57.389 45.000 0.00 0.00 0.00 4.02
1938 3218 1.833630 TGGTTTTGTTGGCATTCACCA 59.166 42.857 0.00 0.00 38.16 4.17
2384 3668 7.661847 ACAGCTAAATCTTAGTGCAAGTTTACT 59.338 33.333 0.00 0.00 35.58 2.24
2829 4124 1.271217 GGGAAGCCTACCTTGAAACGT 60.271 52.381 0.00 0.00 32.78 3.99
3005 5750 1.297364 GCCTGCCAAATTGCCACAT 59.703 52.632 0.00 0.00 0.00 3.21
3010 5755 3.340034 CTGCCAAATTGCCACATCAAAT 58.660 40.909 0.00 0.00 0.00 2.32
3019 5764 2.898612 TGCCACATCAAATCACACCAAT 59.101 40.909 0.00 0.00 0.00 3.16
3020 5765 3.255725 GCCACATCAAATCACACCAATG 58.744 45.455 0.00 0.00 0.00 2.82
3032 5777 4.557942 CCAATGAGGTTGCGTTGC 57.442 55.556 0.00 0.00 36.46 4.17
3033 5778 1.959085 CCAATGAGGTTGCGTTGCT 59.041 52.632 0.00 0.00 36.46 3.91
3034 5779 0.387622 CCAATGAGGTTGCGTTGCTG 60.388 55.000 0.00 0.00 36.46 4.41
3035 5780 1.005294 CAATGAGGTTGCGTTGCTGC 61.005 55.000 0.00 0.00 0.00 5.25
3036 5781 2.462255 AATGAGGTTGCGTTGCTGCG 62.462 55.000 0.00 0.00 37.81 5.18
3037 5782 3.649986 GAGGTTGCGTTGCTGCGT 61.650 61.111 0.00 0.00 37.81 5.24
3181 5930 1.548582 CCAAACATGCCTCTTCAGGGT 60.549 52.381 0.00 0.00 40.75 4.34
3223 5972 1.611673 CGAATTGCAACTCCCTCCACT 60.612 52.381 0.00 0.00 0.00 4.00
3325 6074 4.323553 AGTAGGACGAATATGCCTCAAC 57.676 45.455 0.00 0.00 33.28 3.18
3363 6112 2.808543 GGTGTACAACTTGCCTCAAGAG 59.191 50.000 12.89 7.61 43.42 2.85
3372 6121 0.833409 TGCCTCAAGAGAGCTGGTGA 60.833 55.000 0.00 0.00 40.68 4.02
3385 6134 2.240667 AGCTGGTGATGGCACTTCTAAT 59.759 45.455 0.00 0.00 44.52 1.73
3631 6561 1.362224 AGCTGAAGTTCTGGGGCTTA 58.638 50.000 11.26 0.00 0.00 3.09
3688 6618 0.250234 TGCAGACACCATCTAGTGCC 59.750 55.000 0.00 0.00 41.67 5.01
3707 6637 0.251916 CGTGAATTCCTACTGGGCCA 59.748 55.000 5.85 5.85 34.39 5.36
3724 6654 2.886523 GGCCAGCATCAGCATATTAACA 59.113 45.455 0.00 0.00 45.49 2.41
3746 6676 3.986435 ACCTCCACGTATACCTAGGTTT 58.014 45.455 22.11 15.40 33.59 3.27
3787 6717 2.092968 TGCACTTGAGGTTCTTGACAGT 60.093 45.455 0.00 0.00 0.00 3.55
3816 6746 4.093011 GAGGCTGAGATATGTGATAGGGT 58.907 47.826 0.00 0.00 0.00 4.34
3845 6775 2.435693 CCTCGCCGGGATCCTTTCT 61.436 63.158 12.58 0.00 0.00 2.52
3904 6834 1.277557 TGGTGCAACAAGGCTTTTTGT 59.722 42.857 22.92 6.26 42.82 2.83
3922 6852 7.308951 GCTTTTTGTAAATTAGTCACTAGGCCA 60.309 37.037 5.01 0.00 0.00 5.36
3961 6915 2.757894 TAAGAATCCGAGAGAGGGCT 57.242 50.000 0.00 0.00 0.00 5.19
3962 6916 1.118838 AAGAATCCGAGAGAGGGCTG 58.881 55.000 0.00 0.00 0.00 4.85
3963 6917 0.032615 AGAATCCGAGAGAGGGCTGT 60.033 55.000 0.00 0.00 0.00 4.40
3964 6918 0.387565 GAATCCGAGAGAGGGCTGTC 59.612 60.000 0.00 0.00 0.00 3.51
3965 6919 0.324738 AATCCGAGAGAGGGCTGTCA 60.325 55.000 0.00 0.00 34.24 3.58
3966 6920 1.040339 ATCCGAGAGAGGGCTGTCAC 61.040 60.000 0.00 0.00 34.24 3.67
3967 6921 2.487428 CGAGAGAGGGCTGTCACG 59.513 66.667 0.00 0.00 34.24 4.35
3968 6922 2.336478 CGAGAGAGGGCTGTCACGT 61.336 63.158 0.00 0.00 34.24 4.49
3969 6923 1.509004 GAGAGAGGGCTGTCACGTC 59.491 63.158 0.00 0.00 34.71 4.34
3970 6924 1.939769 GAGAGAGGGCTGTCACGTCC 61.940 65.000 0.00 0.00 34.71 4.79
3971 6925 1.979693 GAGAGGGCTGTCACGTCCT 60.980 63.158 0.00 0.00 42.95 3.85
3973 6927 2.203640 AGGGCTGTCACGTCCTCA 60.204 61.111 0.00 0.00 32.31 3.86
3974 6928 2.262915 GGGCTGTCACGTCCTCAG 59.737 66.667 6.75 6.75 0.00 3.35
3975 6929 2.574955 GGGCTGTCACGTCCTCAGT 61.575 63.158 11.14 0.00 0.00 3.41
3976 6930 1.248785 GGGCTGTCACGTCCTCAGTA 61.249 60.000 11.14 0.00 0.00 2.74
3977 6931 0.171455 GGCTGTCACGTCCTCAGTAG 59.829 60.000 11.14 0.00 0.00 2.57
3978 6932 0.171455 GCTGTCACGTCCTCAGTAGG 59.829 60.000 11.14 0.00 45.21 3.18
4027 6981 4.754114 GCATACATGGAGGTTCTGAATCTC 59.246 45.833 20.00 20.00 0.00 2.75
4083 7037 0.257039 CAGCCCTGAATAGTGGCCTT 59.743 55.000 3.32 0.00 39.61 4.35
4205 7159 1.100510 CACACCATGAAGCAGGATGG 58.899 55.000 0.00 6.39 44.23 3.51
4243 7197 4.759205 AAGGCGGCCACCCAATCC 62.759 66.667 23.09 0.00 0.00 3.01
4269 7223 2.588856 CTAGGAGGAAAACCCCGGCG 62.589 65.000 0.00 0.00 34.66 6.46
4450 7404 0.736053 GAACACACTTTGGGCGTTGA 59.264 50.000 0.00 0.00 0.00 3.18
4497 7451 5.691754 AGACAATCTGTTTGCCGAAATTTTC 59.308 36.000 0.00 0.00 39.03 2.29
4498 7452 5.355596 ACAATCTGTTTGCCGAAATTTTCA 58.644 33.333 9.66 0.00 39.03 2.69
4563 7520 3.193691 AGTCACTAATCTCCTTGGTGTCG 59.806 47.826 2.15 0.00 44.33 4.35
4565 7522 3.192844 TCACTAATCTCCTTGGTGTCGTC 59.807 47.826 2.15 0.00 44.33 4.20
4591 7548 4.192317 GGGAAGAAGAGCAATATTCACGT 58.808 43.478 0.00 0.00 0.00 4.49
4600 7557 4.759782 AGCAATATTCACGTAGTTGAGCT 58.240 39.130 0.00 0.00 41.61 4.09
4668 7625 0.108662 TGATGTCGAGCGCAATCACT 60.109 50.000 11.47 0.00 0.00 3.41
4681 7638 2.165030 GCAATCACTTCCCAACAGGATG 59.835 50.000 0.00 0.00 46.94 3.51
4730 7687 3.256960 GGGGGCCTTGTCACCAGA 61.257 66.667 0.84 0.00 0.00 3.86
4742 7699 3.287867 GTCACCAGACATTCCCATGAT 57.712 47.619 0.00 0.00 44.34 2.45
4743 7700 2.947652 GTCACCAGACATTCCCATGATG 59.052 50.000 0.00 0.00 44.34 3.07
4747 7704 0.928505 AGACATTCCCATGATGGCCA 59.071 50.000 8.56 8.56 35.79 5.36
4844 7801 2.092968 TGAAGTCATAAGGGCGCTGAAT 60.093 45.455 7.64 0.00 0.00 2.57
4850 7807 2.839486 TAAGGGCGCTGAATAGGATG 57.161 50.000 7.64 0.00 0.00 3.51
4851 7808 0.109342 AAGGGCGCTGAATAGGATGG 59.891 55.000 7.64 0.00 0.00 3.51
4852 7809 1.968540 GGGCGCTGAATAGGATGGC 60.969 63.158 7.64 0.00 0.00 4.40
4853 7810 1.968540 GGCGCTGAATAGGATGGCC 60.969 63.158 7.64 0.00 0.00 5.36
4854 7811 1.968540 GCGCTGAATAGGATGGCCC 60.969 63.158 0.00 0.00 33.31 5.80
4855 7812 1.451504 CGCTGAATAGGATGGCCCA 59.548 57.895 0.00 0.00 37.41 5.36
4856 7813 0.604780 CGCTGAATAGGATGGCCCAG 60.605 60.000 0.00 0.00 37.41 4.45
4857 7814 0.767375 GCTGAATAGGATGGCCCAGA 59.233 55.000 0.00 0.00 37.41 3.86
4858 7815 1.271271 GCTGAATAGGATGGCCCAGAG 60.271 57.143 0.00 0.00 37.41 3.35
4859 7816 2.053244 CTGAATAGGATGGCCCAGAGT 58.947 52.381 0.00 0.00 37.41 3.24
4860 7817 1.770658 TGAATAGGATGGCCCAGAGTG 59.229 52.381 0.00 0.00 37.41 3.51
4861 7818 1.771255 GAATAGGATGGCCCAGAGTGT 59.229 52.381 0.00 0.00 37.41 3.55
4862 7819 1.898863 ATAGGATGGCCCAGAGTGTT 58.101 50.000 0.00 0.00 37.41 3.32
4863 7820 0.911769 TAGGATGGCCCAGAGTGTTG 59.088 55.000 0.00 0.00 37.41 3.33
4864 7821 1.379044 GGATGGCCCAGAGTGTTGG 60.379 63.158 0.00 0.00 38.00 3.77
4865 7822 1.685224 GATGGCCCAGAGTGTTGGA 59.315 57.895 0.00 0.00 40.87 3.53
4866 7823 0.393537 GATGGCCCAGAGTGTTGGAG 60.394 60.000 0.00 0.00 40.87 3.86
4867 7824 0.842030 ATGGCCCAGAGTGTTGGAGA 60.842 55.000 0.00 0.00 40.87 3.71
4868 7825 1.059584 TGGCCCAGAGTGTTGGAGAA 61.060 55.000 0.00 0.00 40.87 2.87
4869 7826 0.110486 GGCCCAGAGTGTTGGAGAAA 59.890 55.000 0.00 0.00 40.87 2.52
4870 7827 1.272147 GGCCCAGAGTGTTGGAGAAAT 60.272 52.381 0.00 0.00 40.87 2.17
4871 7828 1.815003 GCCCAGAGTGTTGGAGAAATG 59.185 52.381 0.00 0.00 40.87 2.32
4872 7829 1.815003 CCCAGAGTGTTGGAGAAATGC 59.185 52.381 0.00 0.00 40.87 3.56
4873 7830 1.466167 CCAGAGTGTTGGAGAAATGCG 59.534 52.381 0.00 0.00 40.87 4.73
4874 7831 2.416747 CAGAGTGTTGGAGAAATGCGA 58.583 47.619 0.00 0.00 0.00 5.10
4875 7832 2.414481 CAGAGTGTTGGAGAAATGCGAG 59.586 50.000 0.00 0.00 0.00 5.03
4876 7833 2.037772 AGAGTGTTGGAGAAATGCGAGT 59.962 45.455 0.00 0.00 0.00 4.18
4877 7834 2.146342 AGTGTTGGAGAAATGCGAGTG 58.854 47.619 0.00 0.00 0.00 3.51
4878 7835 2.143122 GTGTTGGAGAAATGCGAGTGA 58.857 47.619 0.00 0.00 0.00 3.41
4879 7836 2.548057 GTGTTGGAGAAATGCGAGTGAA 59.452 45.455 0.00 0.00 0.00 3.18
4880 7837 2.548057 TGTTGGAGAAATGCGAGTGAAC 59.452 45.455 0.00 0.00 0.00 3.18
4881 7838 1.428448 TGGAGAAATGCGAGTGAACG 58.572 50.000 0.00 0.00 0.00 3.95
4882 7839 1.000394 TGGAGAAATGCGAGTGAACGA 60.000 47.619 0.00 0.00 35.09 3.85
4883 7840 2.271800 GGAGAAATGCGAGTGAACGAT 58.728 47.619 0.00 0.00 35.09 3.73
4884 7841 2.029728 GGAGAAATGCGAGTGAACGATG 59.970 50.000 0.00 0.00 35.09 3.84
4885 7842 2.002586 AGAAATGCGAGTGAACGATGG 58.997 47.619 0.00 0.00 35.09 3.51
4886 7843 0.447801 AAATGCGAGTGAACGATGGC 59.552 50.000 0.00 0.00 35.09 4.40
4887 7844 1.369091 AATGCGAGTGAACGATGGCC 61.369 55.000 0.00 0.00 35.09 5.36
4888 7845 2.125512 GCGAGTGAACGATGGCCT 60.126 61.111 3.32 0.00 35.09 5.19
4889 7846 2.167861 GCGAGTGAACGATGGCCTC 61.168 63.158 3.32 0.00 35.09 4.70
4890 7847 1.519455 CGAGTGAACGATGGCCTCC 60.519 63.158 3.32 0.00 35.09 4.30
4891 7848 1.901085 GAGTGAACGATGGCCTCCT 59.099 57.895 3.32 0.00 0.00 3.69
4892 7849 0.250513 GAGTGAACGATGGCCTCCTT 59.749 55.000 3.32 0.00 0.00 3.36
4893 7850 0.250513 AGTGAACGATGGCCTCCTTC 59.749 55.000 3.32 5.75 0.00 3.46
4894 7851 0.250513 GTGAACGATGGCCTCCTTCT 59.749 55.000 3.32 0.00 0.00 2.85
4895 7852 0.537188 TGAACGATGGCCTCCTTCTC 59.463 55.000 3.32 0.00 0.00 2.87
4896 7853 0.528684 GAACGATGGCCTCCTTCTCG 60.529 60.000 3.32 5.63 35.56 4.04
4897 7854 1.258445 AACGATGGCCTCCTTCTCGT 61.258 55.000 3.32 6.28 43.73 4.18
4898 7855 1.066587 CGATGGCCTCCTTCTCGTC 59.933 63.158 3.32 0.00 0.00 4.20
4899 7856 1.667154 CGATGGCCTCCTTCTCGTCA 61.667 60.000 3.32 0.00 0.00 4.35
4900 7857 0.755686 GATGGCCTCCTTCTCGTCAT 59.244 55.000 3.32 0.00 0.00 3.06
4901 7858 0.467384 ATGGCCTCCTTCTCGTCATG 59.533 55.000 3.32 0.00 0.00 3.07
4902 7859 1.144936 GGCCTCCTTCTCGTCATGG 59.855 63.158 0.00 0.00 0.00 3.66
4903 7860 1.522580 GCCTCCTTCTCGTCATGGC 60.523 63.158 0.00 0.00 0.00 4.40
4904 7861 1.965754 GCCTCCTTCTCGTCATGGCT 61.966 60.000 0.00 0.00 36.32 4.75
4905 7862 0.103937 CCTCCTTCTCGTCATGGCTC 59.896 60.000 0.00 0.00 0.00 4.70
4906 7863 0.248825 CTCCTTCTCGTCATGGCTCG 60.249 60.000 0.00 0.00 0.00 5.03
4907 7864 0.965866 TCCTTCTCGTCATGGCTCGT 60.966 55.000 0.00 0.00 0.00 4.18
4908 7865 0.803768 CCTTCTCGTCATGGCTCGTG 60.804 60.000 0.00 0.00 0.00 4.35
4909 7866 0.171231 CTTCTCGTCATGGCTCGTGA 59.829 55.000 0.00 1.62 0.00 4.35
4910 7867 0.109272 TTCTCGTCATGGCTCGTGAC 60.109 55.000 14.20 14.20 44.25 3.67
4911 7868 1.517257 CTCGTCATGGCTCGTGACC 60.517 63.158 16.89 5.18 44.69 4.02
4912 7869 2.509336 CGTCATGGCTCGTGACCC 60.509 66.667 16.89 0.68 44.69 4.46
4913 7870 2.662596 GTCATGGCTCGTGACCCA 59.337 61.111 13.55 0.00 42.56 4.51
4914 7871 1.221840 GTCATGGCTCGTGACCCAT 59.778 57.895 13.55 0.00 42.56 4.00
4915 7872 0.811616 GTCATGGCTCGTGACCCATC 60.812 60.000 13.55 0.00 42.56 3.51
4916 7873 1.524621 CATGGCTCGTGACCCATCC 60.525 63.158 0.00 0.00 39.76 3.51
4917 7874 3.094062 ATGGCTCGTGACCCATCCG 62.094 63.158 0.00 0.00 37.24 4.18
4918 7875 3.771160 GGCTCGTGACCCATCCGT 61.771 66.667 0.00 0.00 0.00 4.69
4919 7876 2.509336 GCTCGTGACCCATCCGTG 60.509 66.667 0.00 0.00 0.00 4.94
4920 7877 2.184322 CTCGTGACCCATCCGTGG 59.816 66.667 0.00 0.00 45.61 4.94
4921 7878 2.602267 TCGTGACCCATCCGTGGT 60.602 61.111 0.00 0.00 44.48 4.16
4922 7879 2.167398 CTCGTGACCCATCCGTGGTT 62.167 60.000 0.00 0.00 44.48 3.67
4923 7880 2.032634 CGTGACCCATCCGTGGTTG 61.033 63.158 0.00 0.00 44.48 3.77
4924 7881 1.072505 GTGACCCATCCGTGGTTGT 59.927 57.895 0.00 0.00 44.48 3.32
4925 7882 1.072332 TGACCCATCCGTGGTTGTG 59.928 57.895 0.00 0.00 44.48 3.33
4926 7883 2.282180 ACCCATCCGTGGTTGTGC 60.282 61.111 0.00 0.00 44.48 4.57
4927 7884 3.061848 CCCATCCGTGGTTGTGCC 61.062 66.667 0.00 0.00 44.48 5.01
4928 7885 2.034066 CCATCCGTGGTTGTGCCT 59.966 61.111 0.00 0.00 40.83 4.75
4929 7886 1.603455 CCATCCGTGGTTGTGCCTT 60.603 57.895 0.00 0.00 40.83 4.35
4930 7887 0.322098 CCATCCGTGGTTGTGCCTTA 60.322 55.000 0.00 0.00 40.83 2.69
4931 7888 0.802494 CATCCGTGGTTGTGCCTTAC 59.198 55.000 0.00 0.00 38.35 2.34
4932 7889 0.322187 ATCCGTGGTTGTGCCTTACC 60.322 55.000 0.00 0.00 38.35 2.85
4933 7890 1.072505 CCGTGGTTGTGCCTTACCT 59.927 57.895 0.00 0.00 38.35 3.08
4934 7891 1.234615 CCGTGGTTGTGCCTTACCTG 61.235 60.000 0.00 0.00 38.35 4.00
4935 7892 0.250124 CGTGGTTGTGCCTTACCTGA 60.250 55.000 0.00 0.00 38.35 3.86
4936 7893 1.610624 CGTGGTTGTGCCTTACCTGAT 60.611 52.381 0.00 0.00 38.35 2.90
4937 7894 1.812571 GTGGTTGTGCCTTACCTGATG 59.187 52.381 0.00 0.00 38.35 3.07
4938 7895 1.702401 TGGTTGTGCCTTACCTGATGA 59.298 47.619 0.00 0.00 38.35 2.92
4939 7896 2.107378 TGGTTGTGCCTTACCTGATGAA 59.893 45.455 0.00 0.00 38.35 2.57
4940 7897 3.245229 TGGTTGTGCCTTACCTGATGAAT 60.245 43.478 0.00 0.00 38.35 2.57
4941 7898 4.018870 TGGTTGTGCCTTACCTGATGAATA 60.019 41.667 0.00 0.00 38.35 1.75
4942 7899 4.947388 GGTTGTGCCTTACCTGATGAATAA 59.053 41.667 0.00 0.00 0.00 1.40
4943 7900 5.417580 GGTTGTGCCTTACCTGATGAATAAA 59.582 40.000 0.00 0.00 0.00 1.40
4944 7901 6.404734 GGTTGTGCCTTACCTGATGAATAAAG 60.405 42.308 0.00 0.00 0.00 1.85
4945 7902 5.815581 TGTGCCTTACCTGATGAATAAAGT 58.184 37.500 0.00 0.00 0.00 2.66
4946 7903 6.245408 TGTGCCTTACCTGATGAATAAAGTT 58.755 36.000 0.00 0.00 0.00 2.66
4947 7904 6.719370 TGTGCCTTACCTGATGAATAAAGTTT 59.281 34.615 0.00 0.00 0.00 2.66
4948 7905 7.885922 TGTGCCTTACCTGATGAATAAAGTTTA 59.114 33.333 0.00 0.00 0.00 2.01
4949 7906 8.182227 GTGCCTTACCTGATGAATAAAGTTTAC 58.818 37.037 0.00 0.00 0.00 2.01
4950 7907 7.065324 TGCCTTACCTGATGAATAAAGTTTACG 59.935 37.037 0.00 0.00 0.00 3.18
4951 7908 7.407337 CCTTACCTGATGAATAAAGTTTACGC 58.593 38.462 0.00 0.00 0.00 4.42
4952 7909 5.464965 ACCTGATGAATAAAGTTTACGCG 57.535 39.130 3.53 3.53 0.00 6.01
4953 7910 4.933400 ACCTGATGAATAAAGTTTACGCGT 59.067 37.500 19.17 19.17 0.00 6.01
4954 7911 5.063060 ACCTGATGAATAAAGTTTACGCGTC 59.937 40.000 18.63 0.16 0.00 5.19
4955 7912 5.291128 CCTGATGAATAAAGTTTACGCGTCT 59.709 40.000 18.63 3.38 0.00 4.18
4956 7913 6.474427 CCTGATGAATAAAGTTTACGCGTCTA 59.526 38.462 18.63 1.37 0.00 2.59
4957 7914 7.213252 TGATGAATAAAGTTTACGCGTCTAC 57.787 36.000 18.63 15.61 0.00 2.59
4958 7915 5.669535 TGAATAAAGTTTACGCGTCTACG 57.330 39.130 18.63 0.00 43.27 3.51
4977 7934 3.976704 CCATTAACAGGCAGGTGGA 57.023 52.632 0.00 0.00 0.00 4.02
4978 7935 2.214376 CCATTAACAGGCAGGTGGAA 57.786 50.000 0.00 0.00 0.00 3.53
4979 7936 2.094675 CCATTAACAGGCAGGTGGAAG 58.905 52.381 0.00 0.00 0.00 3.46
4980 7937 2.290896 CCATTAACAGGCAGGTGGAAGA 60.291 50.000 0.00 0.00 0.00 2.87
4981 7938 3.420893 CATTAACAGGCAGGTGGAAGAA 58.579 45.455 0.00 0.00 0.00 2.52
4982 7939 3.806949 TTAACAGGCAGGTGGAAGAAT 57.193 42.857 0.00 0.00 0.00 2.40
4983 7940 2.206576 AACAGGCAGGTGGAAGAATC 57.793 50.000 0.00 0.00 0.00 2.52
4984 7941 1.067295 ACAGGCAGGTGGAAGAATCA 58.933 50.000 0.00 0.00 0.00 2.57
4985 7942 1.004044 ACAGGCAGGTGGAAGAATCAG 59.996 52.381 0.00 0.00 0.00 2.90
4986 7943 0.622665 AGGCAGGTGGAAGAATCAGG 59.377 55.000 0.00 0.00 0.00 3.86
4987 7944 0.329596 GGCAGGTGGAAGAATCAGGT 59.670 55.000 0.00 0.00 0.00 4.00
4988 7945 1.457346 GCAGGTGGAAGAATCAGGTG 58.543 55.000 0.00 0.00 0.00 4.00
4989 7946 1.271597 GCAGGTGGAAGAATCAGGTGT 60.272 52.381 0.00 0.00 0.00 4.16
4990 7947 2.815589 GCAGGTGGAAGAATCAGGTGTT 60.816 50.000 0.00 0.00 0.00 3.32
4991 7948 3.490348 CAGGTGGAAGAATCAGGTGTTT 58.510 45.455 0.00 0.00 0.00 2.83
4992 7949 3.254166 CAGGTGGAAGAATCAGGTGTTTG 59.746 47.826 0.00 0.00 0.00 2.93
4993 7950 2.029918 GGTGGAAGAATCAGGTGTTTGC 60.030 50.000 0.00 0.00 0.00 3.68
4994 7951 2.622942 GTGGAAGAATCAGGTGTTTGCA 59.377 45.455 0.00 0.00 0.00 4.08
4995 7952 3.256631 GTGGAAGAATCAGGTGTTTGCAT 59.743 43.478 0.00 0.00 0.00 3.96
4996 7953 3.507233 TGGAAGAATCAGGTGTTTGCATC 59.493 43.478 0.00 0.00 0.00 3.91
4997 7954 3.119352 GGAAGAATCAGGTGTTTGCATCC 60.119 47.826 0.00 0.00 0.00 3.51
4998 7955 2.450476 AGAATCAGGTGTTTGCATCCC 58.550 47.619 0.00 0.00 0.00 3.85
4999 7956 1.478105 GAATCAGGTGTTTGCATCCCC 59.522 52.381 0.00 0.00 0.00 4.81
5000 7957 0.324645 ATCAGGTGTTTGCATCCCCC 60.325 55.000 0.00 0.00 0.00 5.40
5015 8513 3.652687 CCCCCACCCAGATGAGAG 58.347 66.667 0.00 0.00 0.00 3.20
5028 8526 1.001293 GATGAGAGATGCGGGCACATA 59.999 52.381 0.00 0.00 0.00 2.29
5030 8528 0.948141 GAGAGATGCGGGCACATAGC 60.948 60.000 0.00 0.00 44.65 2.97
5031 8529 1.070445 GAGATGCGGGCACATAGCT 59.930 57.895 0.00 0.00 44.79 3.32
5039 8537 1.818674 CGGGCACATAGCTTTTTCCTT 59.181 47.619 0.00 0.00 44.79 3.36
5040 8538 2.415893 CGGGCACATAGCTTTTTCCTTG 60.416 50.000 0.00 0.00 44.79 3.61
5055 8553 8.303876 GCTTTTTCCTTGTATATTCAAGAACCA 58.696 33.333 20.21 2.85 45.11 3.67
5061 8559 5.018539 TGTATATTCAAGAACCACCGAGG 57.981 43.478 0.00 0.00 45.67 4.63
5068 8566 0.818040 AGAACCACCGAGGCAACAAC 60.818 55.000 0.00 0.00 43.14 3.32
5082 8580 3.565902 GGCAACAACTCTTTTCTGTAGCT 59.434 43.478 0.00 0.00 0.00 3.32
5105 8603 1.342076 TGTCTAATGTCGGCCTCCTCT 60.342 52.381 0.00 0.00 0.00 3.69
5263 8761 1.270907 AGAGGATTTGACACGGCTCT 58.729 50.000 0.00 0.00 0.00 4.09
5350 8852 8.242729 ACAAGTTCTTGAATTTGAAGGATCTT 57.757 30.769 20.20 0.00 0.00 2.40
5359 8861 0.392998 TGAAGGATCTTGGCCGCTTC 60.393 55.000 0.00 0.00 0.00 3.86
5372 8874 2.990479 GCTTCGGACCCTGGTCAT 59.010 61.111 17.64 0.00 46.20 3.06
5373 8875 1.450312 GCTTCGGACCCTGGTCATG 60.450 63.158 17.64 9.61 46.20 3.07
5374 8876 1.899437 GCTTCGGACCCTGGTCATGA 61.899 60.000 17.64 11.66 46.20 3.07
5376 8878 1.899437 TTCGGACCCTGGTCATGAGC 61.899 60.000 18.01 18.01 46.20 4.26
5377 8879 2.592308 GGACCCTGGTCATGAGCC 59.408 66.667 21.58 13.79 46.20 4.70
5378 8880 2.300967 GGACCCTGGTCATGAGCCA 61.301 63.158 21.58 17.27 46.20 4.75
5379 8881 1.685224 GACCCTGGTCATGAGCCAA 59.315 57.895 21.58 3.63 44.02 4.52
5380 8882 0.038166 GACCCTGGTCATGAGCCAAA 59.962 55.000 21.58 2.88 44.02 3.28
5381 8883 0.482446 ACCCTGGTCATGAGCCAAAA 59.518 50.000 21.58 2.51 35.32 2.44
5383 8885 0.523072 CCTGGTCATGAGCCAAAACG 59.477 55.000 21.58 8.01 35.32 3.60
5384 8886 1.522668 CTGGTCATGAGCCAAAACGA 58.477 50.000 21.58 0.67 35.32 3.85
5385 8887 1.466167 CTGGTCATGAGCCAAAACGAG 59.534 52.381 21.58 7.07 35.32 4.18
5386 8888 1.202758 TGGTCATGAGCCAAAACGAGT 60.203 47.619 21.58 0.00 32.29 4.18
5387 8889 1.197721 GGTCATGAGCCAAAACGAGTG 59.802 52.381 14.08 0.00 0.00 3.51
5388 8890 1.197721 GTCATGAGCCAAAACGAGTGG 59.802 52.381 0.00 0.00 39.33 4.00
5390 8892 1.244019 ATGAGCCAAAACGAGTGGGC 61.244 55.000 0.75 0.75 46.77 5.36
5392 8894 3.124686 GCCAAAACGAGTGGGCAA 58.875 55.556 3.94 0.00 45.70 4.52
5393 8895 1.665442 GCCAAAACGAGTGGGCAAT 59.335 52.632 3.94 0.00 45.70 3.56
5394 8896 0.667184 GCCAAAACGAGTGGGCAATG 60.667 55.000 3.94 0.00 45.70 2.82
5396 8898 0.673437 CAAAACGAGTGGGCAATGGT 59.327 50.000 0.00 0.00 0.00 3.55
5397 8899 1.068434 CAAAACGAGTGGGCAATGGTT 59.932 47.619 0.00 0.00 0.00 3.67
5399 8901 1.178534 AACGAGTGGGCAATGGTTGG 61.179 55.000 0.00 0.00 0.00 3.77
5400 8902 1.303236 CGAGTGGGCAATGGTTGGA 60.303 57.895 0.00 0.00 0.00 3.53
5401 8903 0.680921 CGAGTGGGCAATGGTTGGAT 60.681 55.000 0.00 0.00 0.00 3.41
5402 8904 1.408127 CGAGTGGGCAATGGTTGGATA 60.408 52.381 0.00 0.00 0.00 2.59
5403 8905 2.301346 GAGTGGGCAATGGTTGGATAG 58.699 52.381 0.00 0.00 0.00 2.08
5405 8907 1.064017 GTGGGCAATGGTTGGATAGGA 60.064 52.381 0.00 0.00 0.00 2.94
5406 8908 1.643286 TGGGCAATGGTTGGATAGGAA 59.357 47.619 0.00 0.00 0.00 3.36
5407 8909 2.031870 GGGCAATGGTTGGATAGGAAC 58.968 52.381 0.00 0.00 0.00 3.62
5408 8910 1.676006 GGCAATGGTTGGATAGGAACG 59.324 52.381 0.00 0.00 0.00 3.95
5409 8911 2.639065 GCAATGGTTGGATAGGAACGA 58.361 47.619 0.00 0.00 0.00 3.85
5410 8912 3.214328 GCAATGGTTGGATAGGAACGAT 58.786 45.455 0.00 0.00 0.00 3.73
5411 8913 3.003689 GCAATGGTTGGATAGGAACGATG 59.996 47.826 0.00 0.00 0.00 3.84
5412 8914 4.450976 CAATGGTTGGATAGGAACGATGA 58.549 43.478 0.00 0.00 0.00 2.92
5414 8916 2.159156 TGGTTGGATAGGAACGATGACG 60.159 50.000 0.00 0.00 45.75 4.35
5415 8917 2.100252 GGTTGGATAGGAACGATGACGA 59.900 50.000 0.00 0.00 42.66 4.20
5416 8918 3.429822 GGTTGGATAGGAACGATGACGAA 60.430 47.826 0.00 0.00 42.66 3.85
5417 8919 3.710326 TGGATAGGAACGATGACGAAG 57.290 47.619 0.00 0.00 42.66 3.79
5418 8920 2.223735 TGGATAGGAACGATGACGAAGC 60.224 50.000 0.00 0.00 42.66 3.86
5419 8921 2.223735 GGATAGGAACGATGACGAAGCA 60.224 50.000 0.00 0.00 42.66 3.91
5420 8922 3.553096 GGATAGGAACGATGACGAAGCAT 60.553 47.826 0.00 0.00 42.66 3.79
5421 8923 1.645034 AGGAACGATGACGAAGCATG 58.355 50.000 0.00 0.00 42.66 4.06
5422 8924 0.026803 GGAACGATGACGAAGCATGC 59.973 55.000 10.51 10.51 42.66 4.06
5423 8925 0.721154 GAACGATGACGAAGCATGCA 59.279 50.000 21.98 0.00 42.66 3.96
5424 8926 0.723414 AACGATGACGAAGCATGCAG 59.277 50.000 21.98 13.16 42.66 4.41
5425 8927 0.108662 ACGATGACGAAGCATGCAGA 60.109 50.000 21.98 0.00 42.66 4.26
5426 8928 1.001624 CGATGACGAAGCATGCAGAA 58.998 50.000 21.98 5.59 42.66 3.02
5427 8929 1.596260 CGATGACGAAGCATGCAGAAT 59.404 47.619 21.98 9.84 42.66 2.40
5428 8930 2.599142 CGATGACGAAGCATGCAGAATG 60.599 50.000 21.98 7.16 42.66 2.67
5429 8931 1.812235 TGACGAAGCATGCAGAATGT 58.188 45.000 21.98 10.52 38.65 2.71
5432 8934 0.806868 CGAAGCATGCAGAATGTGGT 59.193 50.000 21.98 0.00 38.65 4.16
5433 8935 1.200716 CGAAGCATGCAGAATGTGGTT 59.799 47.619 21.98 1.00 35.83 3.67
5435 8937 3.248266 GAAGCATGCAGAATGTGGTTTC 58.752 45.455 21.98 6.84 33.73 2.78
5436 8938 2.522185 AGCATGCAGAATGTGGTTTCT 58.478 42.857 21.98 0.00 38.65 2.52
5446 8948 6.263516 AGAATGTGGTTTCTGAACATGATG 57.736 37.500 0.00 0.00 37.51 3.07
5447 8949 5.771666 AGAATGTGGTTTCTGAACATGATGT 59.228 36.000 0.00 0.00 37.51 3.06
5448 8950 5.633830 ATGTGGTTTCTGAACATGATGTC 57.366 39.130 0.00 0.00 37.51 3.06
5449 8951 4.459330 TGTGGTTTCTGAACATGATGTCA 58.541 39.130 0.00 0.00 37.51 3.58
5451 8953 3.503363 TGGTTTCTGAACATGATGTCAGC 59.497 43.478 15.51 3.96 37.51 4.26
5452 8954 3.755378 GGTTTCTGAACATGATGTCAGCT 59.245 43.478 15.51 0.00 37.51 4.24
5453 8955 4.217118 GGTTTCTGAACATGATGTCAGCTT 59.783 41.667 15.51 0.00 37.51 3.74
5454 8956 5.152097 GTTTCTGAACATGATGTCAGCTTG 58.848 41.667 15.51 2.65 35.79 4.01
5456 8958 2.486592 CTGAACATGATGTCAGCTTGCA 59.513 45.455 0.00 0.00 0.00 4.08
5457 8959 3.086282 TGAACATGATGTCAGCTTGCAT 58.914 40.909 0.00 0.00 0.00 3.96
5459 8961 4.701171 TGAACATGATGTCAGCTTGCATAA 59.299 37.500 0.00 0.00 0.00 1.90
5460 8962 5.358725 TGAACATGATGTCAGCTTGCATAAT 59.641 36.000 0.00 0.00 0.00 1.28
5461 8963 5.183014 ACATGATGTCAGCTTGCATAATG 57.817 39.130 17.21 17.21 39.00 1.90
5463 8965 4.625972 TGATGTCAGCTTGCATAATGTG 57.374 40.909 0.00 0.00 0.00 3.21
5464 8966 3.379057 TGATGTCAGCTTGCATAATGTGG 59.621 43.478 0.00 0.00 0.00 4.17
5465 8967 2.093890 TGTCAGCTTGCATAATGTGGG 58.906 47.619 0.00 0.00 0.00 4.61
5466 8968 2.290832 TGTCAGCTTGCATAATGTGGGA 60.291 45.455 0.00 0.00 0.00 4.37
5467 8969 2.954318 GTCAGCTTGCATAATGTGGGAT 59.046 45.455 0.00 0.00 0.00 3.85
5468 8970 3.382546 GTCAGCTTGCATAATGTGGGATT 59.617 43.478 0.00 0.00 0.00 3.01
5469 8971 3.382227 TCAGCTTGCATAATGTGGGATTG 59.618 43.478 0.00 0.00 0.00 2.67
5470 8972 3.382227 CAGCTTGCATAATGTGGGATTGA 59.618 43.478 0.00 0.00 0.00 2.57
5471 8973 3.635373 AGCTTGCATAATGTGGGATTGAG 59.365 43.478 0.00 0.00 0.00 3.02
5472 8974 3.797865 GCTTGCATAATGTGGGATTGAGC 60.798 47.826 0.00 0.00 0.00 4.26
5473 8975 2.309613 TGCATAATGTGGGATTGAGCC 58.690 47.619 0.00 0.00 0.00 4.70
5475 8977 2.555757 GCATAATGTGGGATTGAGCCTC 59.444 50.000 0.00 0.00 0.00 4.70
5480 8982 1.918262 TGTGGGATTGAGCCTCTCATT 59.082 47.619 0.00 0.00 40.39 2.57
5481 8983 2.295885 GTGGGATTGAGCCTCTCATTG 58.704 52.381 0.00 0.00 40.39 2.82
5482 8984 1.213678 TGGGATTGAGCCTCTCATTGG 59.786 52.381 0.00 0.00 40.39 3.16
5484 8986 2.570135 GGATTGAGCCTCTCATTGGAC 58.430 52.381 0.00 0.00 40.39 4.02
5486 8988 1.361204 TTGAGCCTCTCATTGGACCA 58.639 50.000 0.00 0.00 40.39 4.02
5488 8990 1.280133 TGAGCCTCTCATTGGACCAAG 59.720 52.381 13.43 5.31 35.39 3.61
5489 8991 1.280421 GAGCCTCTCATTGGACCAAGT 59.720 52.381 13.43 0.00 0.00 3.16
5490 8992 1.004044 AGCCTCTCATTGGACCAAGTG 59.996 52.381 13.43 10.93 0.00 3.16
5524 9390 5.009631 TCAATCCCCACACATTCTAACTTG 58.990 41.667 0.00 0.00 0.00 3.16
5549 9415 7.012515 TGGTATGTTTATTATGTTTGGGCTACG 59.987 37.037 0.00 0.00 0.00 3.51
5567 9433 1.539827 ACGCATGTTGGAACTTAAGCC 59.460 47.619 1.29 0.00 0.00 4.35
5697 9564 1.942657 GAGAGCAGCACACAACTTTCA 59.057 47.619 0.00 0.00 0.00 2.69
5700 9567 2.291465 GAGCAGCACACAACTTTCATGA 59.709 45.455 0.00 0.00 0.00 3.07
5701 9568 2.689471 AGCAGCACACAACTTTCATGAA 59.311 40.909 3.38 3.38 0.00 2.57
5702 9569 3.047796 GCAGCACACAACTTTCATGAAG 58.952 45.455 8.41 5.87 41.32 3.02
5703 9570 3.047796 CAGCACACAACTTTCATGAAGC 58.952 45.455 8.41 6.12 39.04 3.86
5753 9621 8.391106 CAAAATGACACTCTAATACAACTAGGC 58.609 37.037 0.00 0.00 0.00 3.93
5835 9703 7.126421 ACATGTCTTGGTAGGATCTTCTAACAT 59.874 37.037 0.00 0.00 36.88 2.71
5901 9769 4.382320 GTAGAACCCGCGGCCACA 62.382 66.667 22.85 0.00 0.00 4.17
6143 10013 4.837896 AACAAAGGAGAAGCTAACTTGC 57.162 40.909 0.00 0.00 35.82 4.01
6287 10158 1.845809 CTGACTTGACACCGCCTTGC 61.846 60.000 0.00 0.00 0.00 4.01
6292 10163 4.660938 GACACCGCCTTGCCCCTT 62.661 66.667 0.00 0.00 0.00 3.95
6307 10178 1.739562 CCTTGTCACAGAGGCTCGC 60.740 63.158 9.22 0.00 0.00 5.03
6351 10243 4.457466 TGGTCAGGAAACAGTAGAAAACC 58.543 43.478 0.00 0.00 0.00 3.27
6467 11734 0.106918 TTTTGACGTGCCCTCAGGTT 60.107 50.000 0.00 0.00 40.93 3.50
6477 11744 1.339151 GCCCTCAGGTTAGGTGTCTTG 60.339 57.143 0.00 0.00 34.56 3.02
6509 11776 1.066502 GGTCAGACCTGCTCTTCCTTC 60.067 57.143 12.94 0.00 34.73 3.46
6511 11778 0.251634 CAGACCTGCTCTTCCTTCCC 59.748 60.000 0.00 0.00 0.00 3.97
6622 12730 1.953686 TGCACCACTAGAGTTTTTGCC 59.046 47.619 0.00 0.00 0.00 4.52
6623 12731 1.953686 GCACCACTAGAGTTTTTGCCA 59.046 47.619 0.00 0.00 0.00 4.92
6751 12871 0.606673 GACCCCAGTTCTGGTTCTGC 60.607 60.000 16.33 0.00 34.20 4.26
6789 12909 5.171476 ACTCCAACATAGACACAATCTTCG 58.829 41.667 0.00 0.00 39.04 3.79
6812 12932 2.571206 GCAACGGAATTCAACTTCGAC 58.429 47.619 7.93 0.00 0.00 4.20
6832 12952 2.552315 ACGCAACAACTCGGATGAAATT 59.448 40.909 0.00 0.00 0.00 1.82
6834 12954 4.088648 CGCAACAACTCGGATGAAATTAC 58.911 43.478 0.00 0.00 0.00 1.89
6843 12963 6.620678 ACTCGGATGAAATTACCAAAACATG 58.379 36.000 0.00 0.00 0.00 3.21
6862 12982 4.530161 ACATGGAGCTACTAGGAATGATCC 59.470 45.833 0.00 0.00 46.98 3.36
6876 12996 4.143333 ATCCGGTCGTCTTGGCCG 62.143 66.667 0.00 0.05 44.55 6.13
6883 13003 2.281208 CGTCTTGGCCGGGAAACA 60.281 61.111 2.18 0.00 0.00 2.83
6893 13013 1.235724 CCGGGAAACAGAAACCTGTC 58.764 55.000 0.00 0.00 43.60 3.51
6992 14169 0.548031 TTGCTGCCTCCTAAGATGGG 59.452 55.000 0.00 0.00 0.00 4.00
6993 14170 1.348008 TGCTGCCTCCTAAGATGGGG 61.348 60.000 0.00 0.00 0.00 4.96
6999 14176 3.560226 TCCTAAGATGGGGAGGAGC 57.440 57.895 0.00 0.00 34.36 4.70
7019 14196 3.057245 AGCGGAGAAAAAGAAAGAATGGC 60.057 43.478 0.00 0.00 0.00 4.40
7021 14198 3.245797 GGAGAAAAAGAAAGAATGGCGC 58.754 45.455 0.00 0.00 0.00 6.53
7036 14213 1.226773 GCGCATTCCATGGCTTCAC 60.227 57.895 6.96 0.00 0.00 3.18
7037 14214 1.936436 GCGCATTCCATGGCTTCACA 61.936 55.000 6.96 0.00 0.00 3.58
7038 14215 0.179156 CGCATTCCATGGCTTCACAC 60.179 55.000 6.96 0.00 0.00 3.82
7039 14216 0.174162 GCATTCCATGGCTTCACACC 59.826 55.000 6.96 0.00 0.00 4.16
7058 14235 0.676782 CCACCCCGTTCAGGAATGAC 60.677 60.000 2.86 0.00 45.00 3.06
7128 14306 0.521735 GTTTGACCGGATGTCCTTGC 59.478 55.000 9.46 0.00 43.78 4.01
7157 14335 2.508526 GCAATGTTCTGACCTCAACCT 58.491 47.619 0.00 0.00 0.00 3.50
7175 14353 3.121030 CGACGCAAAGAGGGGCAG 61.121 66.667 0.00 0.00 38.31 4.85
7179 14357 0.678048 ACGCAAAGAGGGGCAGATTC 60.678 55.000 0.00 0.00 33.80 2.52
7231 14409 3.678548 CGTCTAACTAACCCAGCTGAAAC 59.321 47.826 17.39 0.00 0.00 2.78
7243 14421 0.030638 GCTGAAACCGCAAGCAGAAA 59.969 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
712 1350 7.708752 GTCTTCTGCAAGTTAGAGCATTACTAT 59.291 37.037 0.00 0.00 40.42 2.12
729 1367 0.456142 CGAATCGTCCGTCTTCTGCA 60.456 55.000 0.00 0.00 0.00 4.41
730 1368 1.140407 CCGAATCGTCCGTCTTCTGC 61.140 60.000 0.82 0.00 0.00 4.26
733 1371 0.734942 TTGCCGAATCGTCCGTCTTC 60.735 55.000 0.82 0.00 0.00 2.87
736 1374 0.300789 GAATTGCCGAATCGTCCGTC 59.699 55.000 0.82 0.00 0.00 4.79
758 1396 2.409948 AAAGCAGCTCTGTCCCATAC 57.590 50.000 0.00 0.00 0.00 2.39
780 1420 3.887621 TCCAGCCCATATATACGAAGC 57.112 47.619 0.00 0.00 0.00 3.86
789 1429 5.380043 CTGTATCTGTTTTCCAGCCCATAT 58.620 41.667 0.00 0.00 41.25 1.78
790 1430 4.780815 CTGTATCTGTTTTCCAGCCCATA 58.219 43.478 0.00 0.00 41.25 2.74
791 1431 3.624777 CTGTATCTGTTTTCCAGCCCAT 58.375 45.455 0.00 0.00 41.25 4.00
792 1432 2.879756 GCTGTATCTGTTTTCCAGCCCA 60.880 50.000 0.00 0.00 42.00 5.36
793 1433 1.745653 GCTGTATCTGTTTTCCAGCCC 59.254 52.381 0.00 0.00 42.00 5.19
795 1435 1.745653 GGGCTGTATCTGTTTTCCAGC 59.254 52.381 0.00 0.00 45.93 4.85
796 1436 3.012518 CTGGGCTGTATCTGTTTTCCAG 58.987 50.000 0.00 0.00 42.97 3.86
797 1437 2.642311 TCTGGGCTGTATCTGTTTTCCA 59.358 45.455 0.00 0.00 0.00 3.53
830 1470 4.627467 AGGTTCGTCTTGAATGAAATCGAG 59.373 41.667 0.00 0.00 39.21 4.04
831 1471 4.388773 CAGGTTCGTCTTGAATGAAATCGA 59.611 41.667 0.00 0.00 39.21 3.59
849 1489 4.340381 GGCTGCATTATTCTCAATCAGGTT 59.660 41.667 0.50 0.00 0.00 3.50
935 1584 4.211920 ACTCTATCTGACAGAGCCCTTAC 58.788 47.826 12.70 0.00 42.80 2.34
984 1633 2.759973 ATCCTTGCTCCTCGCCGA 60.760 61.111 0.00 0.00 38.05 5.54
1218 1867 0.548031 ATAGTACGGACAGGTCGGGA 59.452 55.000 0.00 0.15 34.67 5.14
1263 1913 2.202797 CCGAGCACCAGATCACCG 60.203 66.667 0.00 0.00 0.00 4.94
1368 2020 3.761752 CGTTTCCTCCAAACCACCATAAT 59.238 43.478 0.00 0.00 41.40 1.28
1434 2087 5.125367 AGAAAAGGGGATACAATGGGTAC 57.875 43.478 0.00 0.00 34.07 3.34
1548 2206 1.650153 CAAGTCGATTTGCCGCATTTG 59.350 47.619 7.78 0.00 0.00 2.32
1603 2261 5.878116 CCACAGACAAAAATATCCGGAGTTA 59.122 40.000 11.34 0.00 0.00 2.24
1620 2278 1.134371 GTGCTAGGGGAATCCACAGAC 60.134 57.143 3.57 0.00 38.24 3.51
1677 2335 3.512496 TCTTGTACCTGTATGGGTCACA 58.488 45.455 0.00 0.00 40.48 3.58
1687 2345 0.320697 GCCGTTCCTCTTGTACCTGT 59.679 55.000 0.00 0.00 0.00 4.00
1854 2512 1.548719 GTAGACCAAAATTGCCACCCC 59.451 52.381 0.00 0.00 0.00 4.95
1855 2513 2.243810 TGTAGACCAAAATTGCCACCC 58.756 47.619 0.00 0.00 0.00 4.61
1856 2514 4.306600 CTTTGTAGACCAAAATTGCCACC 58.693 43.478 0.00 0.00 42.31 4.61
1857 2515 3.740832 GCTTTGTAGACCAAAATTGCCAC 59.259 43.478 0.00 0.00 42.31 5.01
1858 2516 3.386078 TGCTTTGTAGACCAAAATTGCCA 59.614 39.130 0.00 0.00 42.31 4.92
1859 2517 3.740832 GTGCTTTGTAGACCAAAATTGCC 59.259 43.478 0.00 0.00 42.31 4.52
1860 2518 4.620982 AGTGCTTTGTAGACCAAAATTGC 58.379 39.130 0.00 0.00 42.31 3.56
1861 2519 5.399301 CGAAGTGCTTTGTAGACCAAAATTG 59.601 40.000 0.00 0.00 42.31 2.32
1862 2520 5.507315 CCGAAGTGCTTTGTAGACCAAAATT 60.507 40.000 0.00 0.00 42.31 1.82
1863 2521 4.023193 CCGAAGTGCTTTGTAGACCAAAAT 60.023 41.667 0.00 0.00 42.31 1.82
1864 2522 3.314080 CCGAAGTGCTTTGTAGACCAAAA 59.686 43.478 0.00 0.00 42.31 2.44
1865 2523 2.875933 CCGAAGTGCTTTGTAGACCAAA 59.124 45.455 0.00 0.00 40.71 3.28
1884 3164 2.545322 GGTTTCTAGCGATTAGTCCCCG 60.545 54.545 0.00 0.00 0.00 5.73
1886 3166 4.403585 AAGGTTTCTAGCGATTAGTCCC 57.596 45.455 0.00 0.00 0.00 4.46
1906 3186 5.303971 CCAACAAAACCATGCAATCCTAAA 58.696 37.500 0.00 0.00 0.00 1.85
1907 3187 4.802248 GCCAACAAAACCATGCAATCCTAA 60.802 41.667 0.00 0.00 0.00 2.69
1908 3188 3.306641 GCCAACAAAACCATGCAATCCTA 60.307 43.478 0.00 0.00 0.00 2.94
1909 3189 2.550639 GCCAACAAAACCATGCAATCCT 60.551 45.455 0.00 0.00 0.00 3.24
1910 3190 1.805943 GCCAACAAAACCATGCAATCC 59.194 47.619 0.00 0.00 0.00 3.01
1911 3191 2.492012 TGCCAACAAAACCATGCAATC 58.508 42.857 0.00 0.00 0.00 2.67
1912 3192 2.634815 TGCCAACAAAACCATGCAAT 57.365 40.000 0.00 0.00 0.00 3.56
1913 3193 2.634815 ATGCCAACAAAACCATGCAA 57.365 40.000 0.00 0.00 31.81 4.08
1914 3194 2.158856 TGAATGCCAACAAAACCATGCA 60.159 40.909 0.00 0.00 0.00 3.96
1925 3205 1.270252 CCAACCTTGGTGAATGCCAAC 60.270 52.381 0.00 0.00 42.98 3.77
1937 3217 1.269448 CACGACCAAATCCCAACCTTG 59.731 52.381 0.00 0.00 0.00 3.61
1938 3218 1.133606 ACACGACCAAATCCCAACCTT 60.134 47.619 0.00 0.00 0.00 3.50
2066 3346 4.469657 TGGATACCTTGTGGCATAAATCC 58.530 43.478 15.41 15.41 36.63 3.01
2195 3475 5.519927 CGTCACTATCATTAGCATTCACACA 59.480 40.000 0.00 0.00 0.00 3.72
2384 3668 4.058124 CACTGCACTAGCTTGTTGAACTA 58.942 43.478 0.00 0.00 42.74 2.24
2417 3701 3.063997 GCGATGGATGATTCGTTTCTGTT 59.936 43.478 0.00 0.00 37.66 3.16
2829 4124 5.428457 AGGGTATGGAACTACAATCATGTCA 59.572 40.000 0.00 0.00 41.05 3.58
2869 5614 6.947158 TGCAATAATGAATCCATGCTATACCA 59.053 34.615 0.00 0.00 32.36 3.25
3019 5764 3.648982 CGCAGCAACGCAACCTCA 61.649 61.111 0.00 0.00 0.00 3.86
3020 5765 3.181169 AACGCAGCAACGCAACCTC 62.181 57.895 0.00 0.00 36.19 3.85
3024 5769 3.462333 GACCAACGCAGCAACGCAA 62.462 57.895 0.00 0.00 36.19 4.85
3030 5775 2.680841 GGTATAATTGACCAACGCAGCA 59.319 45.455 6.50 0.00 36.91 4.41
3031 5776 2.943033 AGGTATAATTGACCAACGCAGC 59.057 45.455 12.46 0.00 39.65 5.25
3032 5777 3.242739 GCAGGTATAATTGACCAACGCAG 60.243 47.826 12.46 0.00 39.65 5.18
3033 5778 2.680841 GCAGGTATAATTGACCAACGCA 59.319 45.455 12.46 0.00 39.65 5.24
3034 5779 2.680841 TGCAGGTATAATTGACCAACGC 59.319 45.455 12.46 11.51 39.65 4.84
3035 5780 3.312421 CCTGCAGGTATAATTGACCAACG 59.688 47.826 25.53 0.00 39.65 4.10
3036 5781 3.632145 CCCTGCAGGTATAATTGACCAAC 59.368 47.826 30.63 5.73 39.65 3.77
3037 5782 3.525609 TCCCTGCAGGTATAATTGACCAA 59.474 43.478 30.63 0.00 39.65 3.67
3203 5952 0.804989 GTGGAGGGAGTTGCAATTCG 59.195 55.000 14.89 0.00 0.00 3.34
3223 5972 5.690997 TGAAAAACCGTGTGCATTACATA 57.309 34.783 0.00 0.00 42.24 2.29
3363 6112 0.035630 AGAAGTGCCATCACCAGCTC 60.036 55.000 0.00 0.00 44.16 4.09
3372 6121 5.880332 ACGTGAATAACATTAGAAGTGCCAT 59.120 36.000 0.00 0.00 0.00 4.40
3385 6134 6.275494 TGAGACAGGAATACGTGAATAACA 57.725 37.500 0.00 0.00 36.05 2.41
3631 6561 7.331193 GCAGCTGATTTCAGATCAAAGAAAATT 59.669 33.333 20.43 0.00 46.59 1.82
3688 6618 0.251916 TGGCCCAGTAGGAATTCACG 59.748 55.000 7.93 0.00 38.24 4.35
3707 6637 4.823989 GGAGGTTGTTAATATGCTGATGCT 59.176 41.667 0.00 0.00 40.48 3.79
3724 6654 3.677156 ACCTAGGTATACGTGGAGGTT 57.323 47.619 14.41 1.05 33.46 3.50
3746 6676 4.583907 TGCATTGATCACCTTCAAAGTTCA 59.416 37.500 0.00 0.00 38.98 3.18
3851 6781 3.792401 TGGTATCATGTTGGATGACGAC 58.208 45.455 0.00 0.00 0.00 4.34
3852 6782 4.687901 ATGGTATCATGTTGGATGACGA 57.312 40.909 0.00 0.00 31.34 4.20
3853 6783 4.555313 GCAATGGTATCATGTTGGATGACG 60.555 45.833 0.00 0.00 33.18 4.35
3922 6852 2.363306 TCAAGTTTGGCCACATCACT 57.637 45.000 3.88 2.02 0.00 3.41
3927 6857 4.462483 GGATTCTTATCAAGTTTGGCCACA 59.538 41.667 3.88 0.00 32.09 4.17
3969 6923 4.082571 CCATTTTTGTTGCTCCTACTGAGG 60.083 45.833 0.00 0.00 45.35 3.86
3970 6924 4.616835 GCCATTTTTGTTGCTCCTACTGAG 60.617 45.833 0.00 0.00 44.47 3.35
3971 6925 3.255642 GCCATTTTTGTTGCTCCTACTGA 59.744 43.478 0.00 0.00 0.00 3.41
3972 6926 3.578688 GCCATTTTTGTTGCTCCTACTG 58.421 45.455 0.00 0.00 0.00 2.74
3973 6927 2.562738 GGCCATTTTTGTTGCTCCTACT 59.437 45.455 0.00 0.00 0.00 2.57
3974 6928 2.562738 AGGCCATTTTTGTTGCTCCTAC 59.437 45.455 5.01 0.00 0.00 3.18
3975 6929 2.825532 GAGGCCATTTTTGTTGCTCCTA 59.174 45.455 5.01 0.00 0.00 2.94
3976 6930 1.620323 GAGGCCATTTTTGTTGCTCCT 59.380 47.619 5.01 0.00 0.00 3.69
3977 6931 1.344114 TGAGGCCATTTTTGTTGCTCC 59.656 47.619 5.01 0.00 0.00 4.70
3978 6932 2.818130 TGAGGCCATTTTTGTTGCTC 57.182 45.000 5.01 0.00 0.00 4.26
3979 6933 2.633967 TGATGAGGCCATTTTTGTTGCT 59.366 40.909 5.01 0.00 32.09 3.91
3980 6934 3.042871 TGATGAGGCCATTTTTGTTGC 57.957 42.857 5.01 0.00 32.09 4.17
3981 6935 3.861113 CGATGATGAGGCCATTTTTGTTG 59.139 43.478 5.01 0.00 32.09 3.33
4051 7005 2.331451 GGCTGGTTGCAACGTGAC 59.669 61.111 22.67 15.92 45.15 3.67
4052 7006 2.904866 GGGCTGGTTGCAACGTGA 60.905 61.111 22.67 8.74 45.15 4.35
4053 7007 2.906897 AGGGCTGGTTGCAACGTG 60.907 61.111 22.67 17.74 45.15 4.49
4054 7008 2.902423 TTCAGGGCTGGTTGCAACGT 62.902 55.000 22.67 0.00 45.15 3.99
4055 7009 1.526575 ATTCAGGGCTGGTTGCAACG 61.527 55.000 22.67 11.50 45.15 4.10
4056 7010 1.474077 CTATTCAGGGCTGGTTGCAAC 59.526 52.381 21.59 21.59 45.15 4.17
4057 7011 1.075374 ACTATTCAGGGCTGGTTGCAA 59.925 47.619 0.00 0.00 45.15 4.08
4058 7012 0.698238 ACTATTCAGGGCTGGTTGCA 59.302 50.000 0.00 0.00 45.15 4.08
4059 7013 1.098050 CACTATTCAGGGCTGGTTGC 58.902 55.000 0.00 0.00 41.94 4.17
4083 7037 4.202503 ACCCTCTTCAAAGCATTCTTGAGA 60.203 41.667 0.00 0.00 31.78 3.27
4205 7159 4.214327 CGCTTCCTCCTCCTCGCC 62.214 72.222 0.00 0.00 0.00 5.54
4243 7197 1.065636 GGTTTTCCTCCTAGGTTCCGG 60.066 57.143 9.08 0.00 36.53 5.14
4450 7404 1.901591 CACATGAGCACCTTGGTCTT 58.098 50.000 0.00 0.00 44.58 3.01
4497 7451 2.953648 TGCCATTGCTAAGATCATGGTG 59.046 45.455 8.75 0.00 38.71 4.17
4498 7452 3.301794 TGCCATTGCTAAGATCATGGT 57.698 42.857 8.75 0.00 38.71 3.55
4537 7491 3.195825 ACCAAGGAGATTAGTGACTTCCG 59.804 47.826 0.00 0.00 0.00 4.30
4563 7520 2.568623 TTGCTCTTCTTCCCAAGGAC 57.431 50.000 0.00 0.00 0.00 3.85
4565 7522 5.067023 GTGAATATTGCTCTTCTTCCCAAGG 59.933 44.000 0.00 0.00 0.00 3.61
4681 7638 2.032290 GGTTTACTGGCACGTTCTTCAC 60.032 50.000 0.00 0.00 0.00 3.18
4691 7648 1.202099 TCCGGATGGGTTTACTGGCA 61.202 55.000 0.00 0.00 37.00 4.92
4730 7687 0.397535 GGTGGCCATCATGGGAATGT 60.398 55.000 12.38 0.00 38.19 2.71
4742 7699 1.761174 GAAGAGGTCAAGGTGGCCA 59.239 57.895 0.00 0.00 46.77 5.36
4743 7700 1.002011 GGAAGAGGTCAAGGTGGCC 60.002 63.158 0.00 0.00 44.07 5.36
4747 7704 0.114560 TCGGAGGAAGAGGTCAAGGT 59.885 55.000 0.00 0.00 0.00 3.50
4844 7801 0.911769 CAACACTCTGGGCCATCCTA 59.088 55.000 6.72 0.00 36.20 2.94
4850 7807 0.110486 TTTCTCCAACACTCTGGGCC 59.890 55.000 0.00 0.00 37.06 5.80
4851 7808 1.815003 CATTTCTCCAACACTCTGGGC 59.185 52.381 0.00 0.00 37.06 5.36
4852 7809 1.815003 GCATTTCTCCAACACTCTGGG 59.185 52.381 0.00 0.00 37.06 4.45
4853 7810 1.466167 CGCATTTCTCCAACACTCTGG 59.534 52.381 0.00 0.00 37.87 3.86
4854 7811 2.414481 CTCGCATTTCTCCAACACTCTG 59.586 50.000 0.00 0.00 0.00 3.35
4855 7812 2.037772 ACTCGCATTTCTCCAACACTCT 59.962 45.455 0.00 0.00 0.00 3.24
4856 7813 2.158449 CACTCGCATTTCTCCAACACTC 59.842 50.000 0.00 0.00 0.00 3.51
4857 7814 2.146342 CACTCGCATTTCTCCAACACT 58.854 47.619 0.00 0.00 0.00 3.55
4858 7815 2.143122 TCACTCGCATTTCTCCAACAC 58.857 47.619 0.00 0.00 0.00 3.32
4859 7816 2.542020 TCACTCGCATTTCTCCAACA 57.458 45.000 0.00 0.00 0.00 3.33
4860 7817 2.411547 CGTTCACTCGCATTTCTCCAAC 60.412 50.000 0.00 0.00 0.00 3.77
4861 7818 1.798223 CGTTCACTCGCATTTCTCCAA 59.202 47.619 0.00 0.00 0.00 3.53
4862 7819 1.000394 TCGTTCACTCGCATTTCTCCA 60.000 47.619 0.00 0.00 0.00 3.86
4863 7820 1.710013 TCGTTCACTCGCATTTCTCC 58.290 50.000 0.00 0.00 0.00 3.71
4864 7821 2.029728 CCATCGTTCACTCGCATTTCTC 59.970 50.000 0.00 0.00 0.00 2.87
4865 7822 2.002586 CCATCGTTCACTCGCATTTCT 58.997 47.619 0.00 0.00 0.00 2.52
4866 7823 1.529826 GCCATCGTTCACTCGCATTTC 60.530 52.381 0.00 0.00 0.00 2.17
4867 7824 0.447801 GCCATCGTTCACTCGCATTT 59.552 50.000 0.00 0.00 0.00 2.32
4868 7825 1.369091 GGCCATCGTTCACTCGCATT 61.369 55.000 0.00 0.00 0.00 3.56
4869 7826 1.815421 GGCCATCGTTCACTCGCAT 60.815 57.895 0.00 0.00 0.00 4.73
4870 7827 2.434185 GGCCATCGTTCACTCGCA 60.434 61.111 0.00 0.00 0.00 5.10
4871 7828 2.125512 AGGCCATCGTTCACTCGC 60.126 61.111 5.01 0.00 0.00 5.03
4872 7829 1.519455 GGAGGCCATCGTTCACTCG 60.519 63.158 5.01 0.00 0.00 4.18
4873 7830 0.250513 AAGGAGGCCATCGTTCACTC 59.749 55.000 5.01 0.00 30.17 3.51
4874 7831 2.377136 AAGGAGGCCATCGTTCACT 58.623 52.632 5.01 0.00 30.17 3.41
4878 7835 1.258445 ACGAGAAGGAGGCCATCGTT 61.258 55.000 5.01 7.69 43.51 3.85
4879 7836 1.682684 ACGAGAAGGAGGCCATCGT 60.683 57.895 5.01 7.90 41.42 3.73
4880 7837 1.066587 GACGAGAAGGAGGCCATCG 59.933 63.158 5.01 7.22 39.22 3.84
4881 7838 0.755686 ATGACGAGAAGGAGGCCATC 59.244 55.000 5.01 0.00 0.00 3.51
4882 7839 0.467384 CATGACGAGAAGGAGGCCAT 59.533 55.000 5.01 0.00 0.00 4.40
4883 7840 1.617018 CCATGACGAGAAGGAGGCCA 61.617 60.000 5.01 0.00 0.00 5.36
4884 7841 1.144936 CCATGACGAGAAGGAGGCC 59.855 63.158 0.00 0.00 0.00 5.19
4885 7842 1.522580 GCCATGACGAGAAGGAGGC 60.523 63.158 0.00 0.00 0.00 4.70
4886 7843 0.103937 GAGCCATGACGAGAAGGAGG 59.896 60.000 0.00 0.00 0.00 4.30
4887 7844 0.248825 CGAGCCATGACGAGAAGGAG 60.249 60.000 0.00 0.00 0.00 3.69
4888 7845 0.965866 ACGAGCCATGACGAGAAGGA 60.966 55.000 12.20 0.00 0.00 3.36
4889 7846 0.803768 CACGAGCCATGACGAGAAGG 60.804 60.000 12.20 0.00 0.00 3.46
4890 7847 0.171231 TCACGAGCCATGACGAGAAG 59.829 55.000 12.20 2.47 0.00 2.85
4891 7848 0.109272 GTCACGAGCCATGACGAGAA 60.109 55.000 12.20 0.00 37.34 2.87
4892 7849 1.506718 GTCACGAGCCATGACGAGA 59.493 57.895 12.20 7.96 37.34 4.04
4893 7850 1.517257 GGTCACGAGCCATGACGAG 60.517 63.158 12.20 6.12 46.19 4.18
4894 7851 2.571757 GGTCACGAGCCATGACGA 59.428 61.111 12.20 0.00 46.19 4.20
4895 7852 2.509336 GGGTCACGAGCCATGACG 60.509 66.667 10.37 0.00 46.19 4.35
4902 7859 2.509336 CACGGATGGGTCACGAGC 60.509 66.667 0.00 0.00 0.00 5.03
4903 7860 2.167398 AACCACGGATGGGTCACGAG 62.167 60.000 0.00 0.00 45.97 4.18
4904 7861 2.211410 AACCACGGATGGGTCACGA 61.211 57.895 0.00 0.00 45.97 4.35
4905 7862 2.032634 CAACCACGGATGGGTCACG 61.033 63.158 0.00 0.00 45.97 4.35
4906 7863 1.072505 ACAACCACGGATGGGTCAC 59.927 57.895 0.00 0.00 45.97 3.67
4907 7864 1.072332 CACAACCACGGATGGGTCA 59.928 57.895 0.00 0.00 45.97 4.02
4908 7865 2.332654 GCACAACCACGGATGGGTC 61.333 63.158 0.00 0.00 45.97 4.46
4912 7869 0.802494 GTAAGGCACAACCACGGATG 59.198 55.000 0.00 0.00 43.14 3.51
4913 7870 0.322187 GGTAAGGCACAACCACGGAT 60.322 55.000 0.00 0.00 43.14 4.18
4914 7871 1.071814 GGTAAGGCACAACCACGGA 59.928 57.895 0.00 0.00 43.14 4.69
4915 7872 1.072505 AGGTAAGGCACAACCACGG 59.927 57.895 5.83 0.00 43.14 4.94
4916 7873 0.250124 TCAGGTAAGGCACAACCACG 60.250 55.000 5.83 0.00 43.14 4.94
4917 7874 1.812571 CATCAGGTAAGGCACAACCAC 59.187 52.381 5.83 0.00 43.14 4.16
4918 7875 1.702401 TCATCAGGTAAGGCACAACCA 59.298 47.619 5.83 0.00 43.14 3.67
4919 7876 2.489938 TCATCAGGTAAGGCACAACC 57.510 50.000 0.00 0.00 36.97 3.77
4920 7877 6.151144 ACTTTATTCATCAGGTAAGGCACAAC 59.849 38.462 0.00 0.00 0.00 3.32
4921 7878 6.245408 ACTTTATTCATCAGGTAAGGCACAA 58.755 36.000 0.00 0.00 0.00 3.33
4922 7879 5.815581 ACTTTATTCATCAGGTAAGGCACA 58.184 37.500 0.00 0.00 0.00 4.57
4923 7880 6.759497 AACTTTATTCATCAGGTAAGGCAC 57.241 37.500 0.00 0.00 0.00 5.01
4924 7881 7.065324 CGTAAACTTTATTCATCAGGTAAGGCA 59.935 37.037 0.00 0.00 0.00 4.75
4925 7882 7.407337 CGTAAACTTTATTCATCAGGTAAGGC 58.593 38.462 0.00 0.00 0.00 4.35
4926 7883 7.407337 GCGTAAACTTTATTCATCAGGTAAGG 58.593 38.462 0.00 0.00 0.00 2.69
4927 7884 7.117454 CGCGTAAACTTTATTCATCAGGTAAG 58.883 38.462 0.00 0.00 0.00 2.34
4928 7885 6.591062 ACGCGTAAACTTTATTCATCAGGTAA 59.409 34.615 11.67 0.00 0.00 2.85
4929 7886 6.101332 ACGCGTAAACTTTATTCATCAGGTA 58.899 36.000 11.67 0.00 0.00 3.08
4930 7887 4.933400 ACGCGTAAACTTTATTCATCAGGT 59.067 37.500 11.67 0.00 0.00 4.00
4931 7888 5.291128 AGACGCGTAAACTTTATTCATCAGG 59.709 40.000 13.97 0.00 0.00 3.86
4932 7889 6.332504 AGACGCGTAAACTTTATTCATCAG 57.667 37.500 13.97 0.00 0.00 2.90
4933 7890 6.021232 CGTAGACGCGTAAACTTTATTCATCA 60.021 38.462 13.97 0.00 0.00 3.07
4934 7891 6.334873 CGTAGACGCGTAAACTTTATTCATC 58.665 40.000 13.97 0.00 0.00 2.92
4935 7892 6.252036 CGTAGACGCGTAAACTTTATTCAT 57.748 37.500 13.97 0.00 0.00 2.57
4936 7893 5.669535 CGTAGACGCGTAAACTTTATTCA 57.330 39.130 13.97 0.00 0.00 2.57
4951 7908 0.928229 GCCTGTTAATGGCGTAGACG 59.072 55.000 6.68 0.00 41.59 4.18
4959 7916 2.094675 CTTCCACCTGCCTGTTAATGG 58.905 52.381 0.00 0.00 0.00 3.16
4960 7917 3.071874 TCTTCCACCTGCCTGTTAATG 57.928 47.619 0.00 0.00 0.00 1.90
4961 7918 3.806949 TTCTTCCACCTGCCTGTTAAT 57.193 42.857 0.00 0.00 0.00 1.40
4962 7919 3.073798 TGATTCTTCCACCTGCCTGTTAA 59.926 43.478 0.00 0.00 0.00 2.01
4963 7920 2.642311 TGATTCTTCCACCTGCCTGTTA 59.358 45.455 0.00 0.00 0.00 2.41
4964 7921 1.425066 TGATTCTTCCACCTGCCTGTT 59.575 47.619 0.00 0.00 0.00 3.16
4965 7922 1.004044 CTGATTCTTCCACCTGCCTGT 59.996 52.381 0.00 0.00 0.00 4.00
4966 7923 1.681166 CCTGATTCTTCCACCTGCCTG 60.681 57.143 0.00 0.00 0.00 4.85
4967 7924 0.622665 CCTGATTCTTCCACCTGCCT 59.377 55.000 0.00 0.00 0.00 4.75
4968 7925 0.329596 ACCTGATTCTTCCACCTGCC 59.670 55.000 0.00 0.00 0.00 4.85
4969 7926 1.271597 ACACCTGATTCTTCCACCTGC 60.272 52.381 0.00 0.00 0.00 4.85
4970 7927 2.867109 ACACCTGATTCTTCCACCTG 57.133 50.000 0.00 0.00 0.00 4.00
4971 7928 3.490348 CAAACACCTGATTCTTCCACCT 58.510 45.455 0.00 0.00 0.00 4.00
4972 7929 2.029918 GCAAACACCTGATTCTTCCACC 60.030 50.000 0.00 0.00 0.00 4.61
4973 7930 2.622942 TGCAAACACCTGATTCTTCCAC 59.377 45.455 0.00 0.00 0.00 4.02
4974 7931 2.942804 TGCAAACACCTGATTCTTCCA 58.057 42.857 0.00 0.00 0.00 3.53
4975 7932 3.119352 GGATGCAAACACCTGATTCTTCC 60.119 47.826 0.00 0.00 0.00 3.46
4976 7933 3.119352 GGGATGCAAACACCTGATTCTTC 60.119 47.826 0.00 0.00 0.00 2.87
4977 7934 2.827921 GGGATGCAAACACCTGATTCTT 59.172 45.455 0.00 0.00 0.00 2.52
4978 7935 2.450476 GGGATGCAAACACCTGATTCT 58.550 47.619 0.00 0.00 0.00 2.40
4979 7936 1.478105 GGGGATGCAAACACCTGATTC 59.522 52.381 8.09 0.00 0.00 2.52
4980 7937 1.560505 GGGGATGCAAACACCTGATT 58.439 50.000 8.09 0.00 0.00 2.57
4981 7938 0.324645 GGGGGATGCAAACACCTGAT 60.325 55.000 13.83 0.00 0.00 2.90
4982 7939 1.076549 GGGGGATGCAAACACCTGA 59.923 57.895 13.83 0.00 0.00 3.86
4983 7940 3.698765 GGGGGATGCAAACACCTG 58.301 61.111 13.83 0.00 0.00 4.00
4998 7955 0.401105 ATCTCTCATCTGGGTGGGGG 60.401 60.000 0.00 0.00 0.00 5.40
4999 7956 0.763652 CATCTCTCATCTGGGTGGGG 59.236 60.000 0.00 0.00 0.00 4.96
5000 7957 0.108207 GCATCTCTCATCTGGGTGGG 59.892 60.000 0.00 0.00 0.00 4.61
5001 7958 0.249784 CGCATCTCTCATCTGGGTGG 60.250 60.000 0.00 0.00 0.00 4.61
5002 7959 0.249784 CCGCATCTCTCATCTGGGTG 60.250 60.000 0.00 0.00 0.00 4.61
5003 7960 1.406065 CCCGCATCTCTCATCTGGGT 61.406 60.000 0.00 0.00 0.00 4.51
5004 7961 1.370437 CCCGCATCTCTCATCTGGG 59.630 63.158 0.00 0.00 0.00 4.45
5005 7962 1.301558 GCCCGCATCTCTCATCTGG 60.302 63.158 0.00 0.00 0.00 3.86
5006 7963 0.879400 GTGCCCGCATCTCTCATCTG 60.879 60.000 0.00 0.00 0.00 2.90
5007 7964 1.332889 TGTGCCCGCATCTCTCATCT 61.333 55.000 0.00 0.00 0.00 2.90
5008 7965 0.250209 ATGTGCCCGCATCTCTCATC 60.250 55.000 0.00 0.00 0.00 2.92
5009 7966 1.001746 CTATGTGCCCGCATCTCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
5015 8513 0.740737 AAAAGCTATGTGCCCGCATC 59.259 50.000 0.00 0.00 44.23 3.91
5028 8526 8.523658 GGTTCTTGAATATACAAGGAAAAAGCT 58.476 33.333 0.00 0.00 44.84 3.74
5030 8528 9.626045 GTGGTTCTTGAATATACAAGGAAAAAG 57.374 33.333 0.00 0.00 44.84 2.27
5031 8529 8.581578 GGTGGTTCTTGAATATACAAGGAAAAA 58.418 33.333 0.00 0.00 44.84 1.94
5039 8537 4.682320 GCCTCGGTGGTTCTTGAATATACA 60.682 45.833 0.00 0.00 38.35 2.29
5040 8538 3.808174 GCCTCGGTGGTTCTTGAATATAC 59.192 47.826 0.00 0.00 38.35 1.47
5055 8553 1.947456 GAAAAGAGTTGTTGCCTCGGT 59.053 47.619 0.00 0.00 34.08 4.69
5061 8559 4.035675 ACAGCTACAGAAAAGAGTTGTTGC 59.964 41.667 0.00 2.83 41.61 4.17
5068 8566 7.386299 ACATTAGACAACAGCTACAGAAAAGAG 59.614 37.037 0.00 0.00 0.00 2.85
5082 8580 1.066430 GGAGGCCGACATTAGACAACA 60.066 52.381 0.00 0.00 0.00 3.33
5105 8603 2.288666 GAGCACCATTCTTTATCCGCA 58.711 47.619 0.00 0.00 0.00 5.69
5289 8787 5.128171 GGTTTAAGGAGGTGGTTGAAAAAGT 59.872 40.000 0.00 0.00 0.00 2.66
5359 8861 2.187946 GCTCATGACCAGGGTCCG 59.812 66.667 15.53 7.25 43.97 4.79
5372 8874 1.896660 GCCCACTCGTTTTGGCTCA 60.897 57.895 0.00 0.00 40.77 4.26
5373 8875 1.452145 TTGCCCACTCGTTTTGGCTC 61.452 55.000 0.00 0.00 44.32 4.70
5374 8876 0.827507 ATTGCCCACTCGTTTTGGCT 60.828 50.000 0.00 0.00 44.32 4.75
5376 8878 0.038343 CCATTGCCCACTCGTTTTGG 60.038 55.000 0.00 0.00 0.00 3.28
5377 8879 0.673437 ACCATTGCCCACTCGTTTTG 59.327 50.000 0.00 0.00 0.00 2.44
5378 8880 1.068434 CAACCATTGCCCACTCGTTTT 59.932 47.619 0.00 0.00 0.00 2.43
5379 8881 0.673437 CAACCATTGCCCACTCGTTT 59.327 50.000 0.00 0.00 0.00 3.60
5380 8882 1.178534 CCAACCATTGCCCACTCGTT 61.179 55.000 0.00 0.00 0.00 3.85
5381 8883 1.603455 CCAACCATTGCCCACTCGT 60.603 57.895 0.00 0.00 0.00 4.18
5383 8885 2.301346 CTATCCAACCATTGCCCACTC 58.699 52.381 0.00 0.00 0.00 3.51
5384 8886 1.063717 CCTATCCAACCATTGCCCACT 60.064 52.381 0.00 0.00 0.00 4.00
5385 8887 1.064017 TCCTATCCAACCATTGCCCAC 60.064 52.381 0.00 0.00 0.00 4.61
5386 8888 1.303898 TCCTATCCAACCATTGCCCA 58.696 50.000 0.00 0.00 0.00 5.36
5387 8889 2.031870 GTTCCTATCCAACCATTGCCC 58.968 52.381 0.00 0.00 0.00 5.36
5388 8890 1.676006 CGTTCCTATCCAACCATTGCC 59.324 52.381 0.00 0.00 0.00 4.52
5390 8892 4.273480 GTCATCGTTCCTATCCAACCATTG 59.727 45.833 0.00 0.00 0.00 2.82
5391 8893 4.451900 GTCATCGTTCCTATCCAACCATT 58.548 43.478 0.00 0.00 0.00 3.16
5392 8894 3.492656 CGTCATCGTTCCTATCCAACCAT 60.493 47.826 0.00 0.00 0.00 3.55
5393 8895 2.159156 CGTCATCGTTCCTATCCAACCA 60.159 50.000 0.00 0.00 0.00 3.67
5394 8896 2.100252 TCGTCATCGTTCCTATCCAACC 59.900 50.000 0.00 0.00 38.33 3.77
5396 8898 3.737047 GCTTCGTCATCGTTCCTATCCAA 60.737 47.826 0.00 0.00 38.33 3.53
5397 8899 2.223735 GCTTCGTCATCGTTCCTATCCA 60.224 50.000 0.00 0.00 38.33 3.41
5399 8901 3.079960 TGCTTCGTCATCGTTCCTATC 57.920 47.619 0.00 0.00 38.33 2.08
5400 8902 3.384668 CATGCTTCGTCATCGTTCCTAT 58.615 45.455 0.00 0.00 38.33 2.57
5401 8903 2.809446 CATGCTTCGTCATCGTTCCTA 58.191 47.619 0.00 0.00 38.33 2.94
5402 8904 1.645034 CATGCTTCGTCATCGTTCCT 58.355 50.000 0.00 0.00 38.33 3.36
5403 8905 0.026803 GCATGCTTCGTCATCGTTCC 59.973 55.000 11.37 0.00 38.33 3.62
5405 8907 0.723414 CTGCATGCTTCGTCATCGTT 59.277 50.000 20.33 0.00 38.33 3.85
5406 8908 0.108662 TCTGCATGCTTCGTCATCGT 60.109 50.000 20.33 0.00 38.33 3.73
5407 8909 1.001624 TTCTGCATGCTTCGTCATCG 58.998 50.000 20.33 0.00 38.55 3.84
5408 8910 2.353889 ACATTCTGCATGCTTCGTCATC 59.646 45.455 20.33 0.00 36.14 2.92
5409 8911 2.096980 CACATTCTGCATGCTTCGTCAT 59.903 45.455 20.33 0.00 36.14 3.06
5410 8912 1.465777 CACATTCTGCATGCTTCGTCA 59.534 47.619 20.33 0.00 36.14 4.35
5411 8913 1.202110 CCACATTCTGCATGCTTCGTC 60.202 52.381 20.33 0.00 36.14 4.20
5412 8914 0.806868 CCACATTCTGCATGCTTCGT 59.193 50.000 20.33 6.14 36.14 3.85
5414 8916 3.057033 AGAAACCACATTCTGCATGCTTC 60.057 43.478 20.33 9.85 38.22 3.86
5415 8917 2.895404 AGAAACCACATTCTGCATGCTT 59.105 40.909 20.33 0.00 38.22 3.91
5416 8918 2.230508 CAGAAACCACATTCTGCATGCT 59.769 45.455 20.33 0.00 46.88 3.79
5417 8919 2.602878 CAGAAACCACATTCTGCATGC 58.397 47.619 11.82 11.82 46.88 4.06
5423 8925 5.771666 ACATCATGTTCAGAAACCACATTCT 59.228 36.000 0.00 0.00 40.23 2.40
5424 8926 6.017400 ACATCATGTTCAGAAACCACATTC 57.983 37.500 0.00 0.00 34.28 2.67
5425 8927 5.535783 TGACATCATGTTCAGAAACCACATT 59.464 36.000 0.00 0.00 34.28 2.71
5426 8928 5.072055 TGACATCATGTTCAGAAACCACAT 58.928 37.500 0.00 0.00 34.28 3.21
5427 8929 4.459330 TGACATCATGTTCAGAAACCACA 58.541 39.130 0.00 0.00 34.28 4.17
5428 8930 4.614535 GCTGACATCATGTTCAGAAACCAC 60.615 45.833 19.43 3.82 34.28 4.16
5429 8931 3.503363 GCTGACATCATGTTCAGAAACCA 59.497 43.478 19.43 0.00 34.28 3.67
5432 8934 4.320714 GCAAGCTGACATCATGTTCAGAAA 60.321 41.667 19.43 0.00 31.65 2.52
5433 8935 3.189910 GCAAGCTGACATCATGTTCAGAA 59.810 43.478 19.43 0.00 31.65 3.02
5435 8937 2.486592 TGCAAGCTGACATCATGTTCAG 59.513 45.455 13.92 13.92 32.51 3.02
5436 8938 2.506444 TGCAAGCTGACATCATGTTCA 58.494 42.857 0.00 0.00 0.00 3.18
5437 8939 3.777465 ATGCAAGCTGACATCATGTTC 57.223 42.857 0.00 0.00 0.00 3.18
5438 8940 5.126545 ACATTATGCAAGCTGACATCATGTT 59.873 36.000 17.22 7.43 37.68 2.71
5439 8941 4.643334 ACATTATGCAAGCTGACATCATGT 59.357 37.500 17.22 17.22 36.67 3.21
5441 8943 4.037565 CCACATTATGCAAGCTGACATCAT 59.962 41.667 5.06 0.00 0.00 2.45
5442 8944 3.379057 CCACATTATGCAAGCTGACATCA 59.621 43.478 5.06 0.00 0.00 3.07
5443 8945 3.243301 CCCACATTATGCAAGCTGACATC 60.243 47.826 5.06 0.00 0.00 3.06
5444 8946 2.691526 CCCACATTATGCAAGCTGACAT 59.308 45.455 6.91 6.91 0.00 3.06
5445 8947 2.093890 CCCACATTATGCAAGCTGACA 58.906 47.619 0.00 0.00 0.00 3.58
5446 8948 2.368439 TCCCACATTATGCAAGCTGAC 58.632 47.619 0.00 0.00 0.00 3.51
5447 8949 2.804986 TCCCACATTATGCAAGCTGA 57.195 45.000 0.00 0.00 0.00 4.26
5448 8950 3.382227 TCAATCCCACATTATGCAAGCTG 59.618 43.478 0.00 0.00 0.00 4.24
5449 8951 3.634504 TCAATCCCACATTATGCAAGCT 58.365 40.909 0.00 0.00 0.00 3.74
5451 8953 3.243636 GGCTCAATCCCACATTATGCAAG 60.244 47.826 0.00 0.00 0.00 4.01
5452 8954 2.694628 GGCTCAATCCCACATTATGCAA 59.305 45.455 0.00 0.00 0.00 4.08
5453 8955 2.091720 AGGCTCAATCCCACATTATGCA 60.092 45.455 0.00 0.00 0.00 3.96
5454 8956 2.555757 GAGGCTCAATCCCACATTATGC 59.444 50.000 10.25 0.00 0.00 3.14
5456 8958 3.718434 TGAGAGGCTCAATCCCACATTAT 59.282 43.478 18.26 0.00 37.57 1.28
5457 8959 3.114606 TGAGAGGCTCAATCCCACATTA 58.885 45.455 18.26 0.00 37.57 1.90
5459 8961 1.588239 TGAGAGGCTCAATCCCACAT 58.412 50.000 18.26 0.00 37.57 3.21
5460 8962 1.588239 ATGAGAGGCTCAATCCCACA 58.412 50.000 18.26 5.40 44.04 4.17
5461 8963 2.295885 CAATGAGAGGCTCAATCCCAC 58.704 52.381 18.26 0.00 44.04 4.61
5463 8965 1.492176 TCCAATGAGAGGCTCAATCCC 59.508 52.381 18.26 0.86 44.04 3.85
5464 8966 2.570135 GTCCAATGAGAGGCTCAATCC 58.430 52.381 18.26 3.39 44.04 3.01
5465 8967 2.092753 TGGTCCAATGAGAGGCTCAATC 60.093 50.000 18.26 7.06 44.04 2.67
5466 8968 1.918262 TGGTCCAATGAGAGGCTCAAT 59.082 47.619 18.26 7.09 44.04 2.57
5467 8969 1.361204 TGGTCCAATGAGAGGCTCAA 58.639 50.000 18.26 4.69 44.04 3.02
5468 8970 1.280133 CTTGGTCCAATGAGAGGCTCA 59.720 52.381 18.26 0.00 44.99 4.26
5469 8971 1.280421 ACTTGGTCCAATGAGAGGCTC 59.720 52.381 6.34 6.34 0.00 4.70
5470 8972 1.004044 CACTTGGTCCAATGAGAGGCT 59.996 52.381 4.34 0.00 0.00 4.58
5471 8973 1.003580 TCACTTGGTCCAATGAGAGGC 59.996 52.381 4.34 0.00 0.00 4.70
5472 8974 3.077359 GTTCACTTGGTCCAATGAGAGG 58.923 50.000 4.34 0.00 0.00 3.69
5473 8975 4.013267 AGTTCACTTGGTCCAATGAGAG 57.987 45.455 4.34 0.00 0.00 3.20
5498 9364 2.807676 AGAATGTGTGGGGATTGAACC 58.192 47.619 0.00 0.00 0.00 3.62
5524 9390 7.357303 CGTAGCCCAAACATAATAAACATACC 58.643 38.462 0.00 0.00 0.00 2.73
5549 9415 4.010349 AGTAGGCTTAAGTTCCAACATGC 58.990 43.478 4.02 0.00 0.00 4.06
5567 9433 0.911769 TGGGGCTGGTTGATGAGTAG 59.088 55.000 0.00 0.00 0.00 2.57
5655 9521 2.715749 ATGCAATCTGTTCGATCCCA 57.284 45.000 0.00 0.00 0.00 4.37
5661 9527 3.867493 TGCTCTCTTATGCAATCTGTTCG 59.133 43.478 0.00 0.00 36.15 3.95
5700 9567 1.625818 CTGTACTGGGGAAGACTGCTT 59.374 52.381 0.00 0.00 36.96 3.91
5701 9568 1.270907 CTGTACTGGGGAAGACTGCT 58.729 55.000 0.00 0.00 0.00 4.24
5702 9569 0.391793 GCTGTACTGGGGAAGACTGC 60.392 60.000 1.65 0.00 0.00 4.40
5703 9570 0.976641 TGCTGTACTGGGGAAGACTG 59.023 55.000 1.65 0.00 0.00 3.51
5753 9621 2.164827 TGATGCTGCTGTTTGCTAATGG 59.835 45.455 0.00 0.00 43.37 3.16
5835 9703 1.934220 CTGAGTTCGCCTAGTCCGCA 61.934 60.000 0.00 0.00 0.00 5.69
5901 9769 3.287867 GACCATGTCCAGGATTCACAT 57.712 47.619 0.00 0.00 0.00 3.21
6018 9887 8.390854 CTTGTGAGCAAAATCATGATAAAGAC 57.609 34.615 9.04 0.00 33.73 3.01
6143 10013 0.861837 AAAAACGAGAGCAGAGCACG 59.138 50.000 0.00 0.00 0.00 5.34
6287 10158 1.298014 GAGCCTCTGTGACAAGGGG 59.702 63.158 13.19 6.33 41.24 4.79
6292 10163 0.609406 ACTAGCGAGCCTCTGTGACA 60.609 55.000 0.00 0.00 0.00 3.58
6307 10178 6.659242 ACCATCCAAACATCAGGTTAAACTAG 59.341 38.462 0.00 0.00 39.29 2.57
6467 11734 4.062293 CGGTCAAATGAACAAGACACCTA 58.938 43.478 0.00 0.00 32.79 3.08
6477 11744 1.804748 GGTCTGACCGGTCAAATGAAC 59.195 52.381 35.36 27.51 39.39 3.18
6509 11776 4.193893 TGGATCGCCATGCCAGGG 62.194 66.667 0.00 0.00 39.92 4.45
6607 12715 2.293399 GTGGGTGGCAAAAACTCTAGTG 59.707 50.000 0.00 0.00 0.00 2.74
6609 12717 2.293399 GTGTGGGTGGCAAAAACTCTAG 59.707 50.000 0.00 0.00 0.00 2.43
6622 12730 1.881973 CCAGAAACTGATGTGTGGGTG 59.118 52.381 0.00 0.00 32.44 4.61
6623 12731 1.494721 ACCAGAAACTGATGTGTGGGT 59.505 47.619 0.00 0.00 32.44 4.51
6751 12871 1.339631 TGGAGTTGCCATTAAGTCGGG 60.340 52.381 0.00 0.00 43.33 5.14
6812 12932 2.900122 ATTTCATCCGAGTTGTTGCG 57.100 45.000 0.00 0.00 0.00 4.85
6832 12952 5.027460 TCCTAGTAGCTCCATGTTTTGGTA 58.973 41.667 0.00 0.00 46.52 3.25
6843 12963 2.494073 CCGGATCATTCCTAGTAGCTCC 59.506 54.545 0.00 0.00 40.17 4.70
6863 12983 3.540367 TTTCCCGGCCAAGACGACC 62.540 63.158 2.24 0.00 35.20 4.79
6883 13003 4.898861 TGCCATTAAAAAGGACAGGTTTCT 59.101 37.500 0.00 0.00 0.00 2.52
6893 13013 6.802834 GTGCAAATTGAATGCCATTAAAAAGG 59.197 34.615 0.00 0.00 43.16 3.11
6933 13053 1.092921 GTGTCGTGCTGGTTTGGACA 61.093 55.000 0.00 0.00 35.44 4.02
6992 14169 2.474410 TTCTTTTTCTCCGCTCCTCC 57.526 50.000 0.00 0.00 0.00 4.30
6993 14170 3.665190 TCTTTCTTTTTCTCCGCTCCTC 58.335 45.455 0.00 0.00 0.00 3.71
6999 14176 3.492313 CGCCATTCTTTCTTTTTCTCCG 58.508 45.455 0.00 0.00 0.00 4.63
7019 14196 0.179156 GTGTGAAGCCATGGAATGCG 60.179 55.000 18.40 0.00 44.97 4.73
7021 14198 0.819582 GGGTGTGAAGCCATGGAATG 59.180 55.000 18.40 0.00 46.21 2.67
7027 14204 2.440599 GGGTGGGTGTGAAGCCAT 59.559 61.111 0.00 0.00 34.02 4.40
7036 14213 2.137177 ATTCCTGAACGGGGTGGGTG 62.137 60.000 0.00 0.00 0.00 4.61
7037 14214 1.850755 ATTCCTGAACGGGGTGGGT 60.851 57.895 0.00 0.00 0.00 4.51
7038 14215 1.378514 CATTCCTGAACGGGGTGGG 60.379 63.158 0.00 0.00 0.00 4.61
7039 14216 0.676782 GTCATTCCTGAACGGGGTGG 60.677 60.000 0.00 0.00 31.85 4.61
7058 14235 0.436913 TTGCATTTAGACACGCGACG 59.563 50.000 15.93 5.81 0.00 5.12
7089 14267 1.063174 CAAGCTTTGACGGCTATGCTC 59.937 52.381 13.15 0.00 39.30 4.26
7128 14306 2.098233 AGAACATTGCGCCGTACGG 61.098 57.895 30.06 30.06 43.93 4.02
7140 14318 2.028930 GTCGAGGTTGAGGTCAGAACAT 60.029 50.000 0.00 0.00 0.00 2.71
7157 14335 3.589654 CTGCCCCTCTTTGCGTCGA 62.590 63.158 0.00 0.00 0.00 4.20
7204 14382 4.330074 CAGCTGGGTTAGTTAGACGAAATG 59.670 45.833 5.57 0.00 0.00 2.32
7210 14388 4.001652 GGTTTCAGCTGGGTTAGTTAGAC 58.998 47.826 15.13 0.00 0.00 2.59
7217 14395 0.179015 TTGCGGTTTCAGCTGGGTTA 60.179 50.000 15.13 0.00 35.28 2.85
7231 14409 2.556287 GTCGGTTTCTGCTTGCGG 59.444 61.111 0.00 0.00 0.00 5.69
7243 14421 2.779506 GATTCACTCCTTTTGGTCGGT 58.220 47.619 0.00 0.00 41.38 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.