Multiple sequence alignment - TraesCS5B01G116500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G116500 chr5B 100.000 5392 0 0 1 5392 198422386 198416995 0.000000e+00 9958
1 TraesCS5B01G116500 chr5B 91.618 680 42 10 1 672 339182039 339181367 0.000000e+00 926
2 TraesCS5B01G116500 chr5D 96.862 4270 91 16 677 4920 193133311 193129059 0.000000e+00 7103
3 TraesCS5B01G116500 chrUn 90.107 1122 101 4 1748 2861 68207042 68205923 0.000000e+00 1448
4 TraesCS5B01G116500 chrUn 99.788 471 1 0 4922 5392 331365620 331365150 0.000000e+00 865
5 TraesCS5B01G116500 chrUn 99.576 472 2 0 4921 5392 331325789 331325318 0.000000e+00 861
6 TraesCS5B01G116500 chrUn 82.707 665 75 25 825 1461 68215377 68214725 6.100000e-154 555
7 TraesCS5B01G116500 chrUn 88.321 274 32 0 1467 1740 68214443 68214170 4.030000e-86 329
8 TraesCS5B01G116500 chr5A 84.866 1011 108 24 819 1797 611040518 611041515 0.000000e+00 977
9 TraesCS5B01G116500 chr5A 92.363 419 32 0 1994 2412 611115109 611115527 1.000000e-166 597
10 TraesCS5B01G116500 chr5A 90.968 155 10 1 1844 1998 611041516 611041666 7.080000e-49 206
11 TraesCS5B01G116500 chr1B 91.581 677 48 4 1 672 92897263 92896591 0.000000e+00 926
12 TraesCS5B01G116500 chr7B 91.311 679 47 7 1 672 454554876 454555549 0.000000e+00 917
13 TraesCS5B01G116500 chr7B 99.788 471 1 0 4922 5392 725612735 725613205 0.000000e+00 865
14 TraesCS5B01G116500 chr7B 98.943 473 5 0 4920 5392 725647595 725648067 0.000000e+00 846
15 TraesCS5B01G116500 chr7B 97.269 476 13 0 4917 5392 253688377 253687902 0.000000e+00 808
16 TraesCS5B01G116500 chr7B 97.598 458 11 0 4935 5392 23638741 23639198 0.000000e+00 785
17 TraesCS5B01G116500 chr2B 91.311 679 47 7 1 672 686430073 686429400 0.000000e+00 917
18 TraesCS5B01G116500 chr2B 91.124 676 50 5 3 672 540473145 540473816 0.000000e+00 907
19 TraesCS5B01G116500 chr2D 91.259 675 52 5 1 672 554778145 554778815 0.000000e+00 913
20 TraesCS5B01G116500 chr2D 86.583 477 56 3 772 1241 567038469 567037994 2.230000e-143 520
21 TraesCS5B01G116500 chr4B 91.163 679 49 6 1 673 141650975 141650302 0.000000e+00 911
22 TraesCS5B01G116500 chr3B 91.150 678 49 6 1 672 119212648 119213320 0.000000e+00 909
23 TraesCS5B01G116500 chr3B 91.163 679 46 8 1 672 652757375 652756704 0.000000e+00 909
24 TraesCS5B01G116500 chr3B 96.429 476 17 0 4917 5392 22524344 22524819 0.000000e+00 785
25 TraesCS5B01G116500 chr4A 100.000 473 0 0 4920 5392 607179586 607179114 0.000000e+00 874
26 TraesCS5B01G116500 chr4A 73.602 894 197 34 1914 2785 513329330 513328454 1.890000e-79 307
27 TraesCS5B01G116500 chr1A 91.067 403 35 1 4991 5392 35545469 35545067 1.320000e-150 544


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G116500 chr5B 198416995 198422386 5391 True 9958.0 9958 100.000 1 5392 1 chr5B.!!$R1 5391
1 TraesCS5B01G116500 chr5B 339181367 339182039 672 True 926.0 926 91.618 1 672 1 chr5B.!!$R2 671
2 TraesCS5B01G116500 chr5D 193129059 193133311 4252 True 7103.0 7103 96.862 677 4920 1 chr5D.!!$R1 4243
3 TraesCS5B01G116500 chrUn 68205923 68207042 1119 True 1448.0 1448 90.107 1748 2861 1 chrUn.!!$R1 1113
4 TraesCS5B01G116500 chrUn 68214170 68215377 1207 True 442.0 555 85.514 825 1740 2 chrUn.!!$R4 915
5 TraesCS5B01G116500 chr5A 611040518 611041666 1148 False 591.5 977 87.917 819 1998 2 chr5A.!!$F2 1179
6 TraesCS5B01G116500 chr1B 92896591 92897263 672 True 926.0 926 91.581 1 672 1 chr1B.!!$R1 671
7 TraesCS5B01G116500 chr7B 454554876 454555549 673 False 917.0 917 91.311 1 672 1 chr7B.!!$F2 671
8 TraesCS5B01G116500 chr2B 686429400 686430073 673 True 917.0 917 91.311 1 672 1 chr2B.!!$R1 671
9 TraesCS5B01G116500 chr2B 540473145 540473816 671 False 907.0 907 91.124 3 672 1 chr2B.!!$F1 669
10 TraesCS5B01G116500 chr2D 554778145 554778815 670 False 913.0 913 91.259 1 672 1 chr2D.!!$F1 671
11 TraesCS5B01G116500 chr4B 141650302 141650975 673 True 911.0 911 91.163 1 673 1 chr4B.!!$R1 672
12 TraesCS5B01G116500 chr3B 119212648 119213320 672 False 909.0 909 91.150 1 672 1 chr3B.!!$F2 671
13 TraesCS5B01G116500 chr3B 652756704 652757375 671 True 909.0 909 91.163 1 672 1 chr3B.!!$R1 671
14 TraesCS5B01G116500 chr4A 513328454 513329330 876 True 307.0 307 73.602 1914 2785 1 chr4A.!!$R1 871

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 801 0.042731 TCCCGTTCCATTCTCCCTCT 59.957 55.000 0.00 0.0 0.00 3.69 F
1233 1291 0.036858 GCCTATGGAGAGGAATCGGC 60.037 60.000 0.00 0.0 39.15 5.54 F
1972 2307 0.032615 ACCCTCTGATCTCCTCGCTT 60.033 55.000 0.00 0.0 0.00 4.68 F
2697 3044 1.610102 GGTCTGCAGAGCTTGACACAT 60.610 52.381 33.19 0.0 39.31 3.21 F
3423 3770 0.674581 TTCTTCATGGGCGCACTCAG 60.675 55.000 12.74 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1837 2172 2.733593 AAACCGAGTGAGCGTCGC 60.734 61.111 9.80 9.8 36.06 5.19 R
2872 3219 1.605710 CAAGCACAGTCCAACAAGAGG 59.394 52.381 0.00 0.0 0.00 3.69 R
3295 3642 0.605319 ACCGTGCCCTTGTACACATG 60.605 55.000 0.00 0.0 36.57 3.21 R
3963 4312 0.741221 GGCACCGGTTGAGAAGCTAG 60.741 60.000 2.97 0.0 0.00 3.42 R
4931 5283 0.031616 TTTTGGACCCTGCCCTTGTT 60.032 50.000 0.00 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 75 3.588955 GGATGATTTGGGTGAAAGTTGC 58.411 45.455 0.00 0.00 0.00 4.17
114 116 2.036933 GAAACTTTTGCGCTCACGAAG 58.963 47.619 9.73 7.99 43.93 3.79
270 274 7.801716 TTGCTATAGACTGTTCTGTTTTTGT 57.198 32.000 3.21 0.00 32.75 2.83
325 329 9.638239 GCTTGTTTTGATGATTCTATGGTTTTA 57.362 29.630 0.00 0.00 0.00 1.52
450 455 9.619316 CTTTCTTATACTAATGGATCTCACGAG 57.381 37.037 0.00 0.00 0.00 4.18
454 459 4.180377 ACTAATGGATCTCACGAGGGTA 57.820 45.455 0.00 0.00 0.00 3.69
533 538 7.100458 TGAAGGAATAAGGATTAGCAAAAGC 57.900 36.000 0.00 0.00 31.76 3.51
558 563 1.987807 CTTGGGGATGTCCGAGGCAT 61.988 60.000 0.00 0.00 35.20 4.40
560 565 2.143419 GGGGATGTCCGAGGCATCT 61.143 63.158 18.69 0.00 41.63 2.90
571 576 5.304357 TGTCCGAGGCATCTCAAGATAATAA 59.696 40.000 0.00 0.00 39.95 1.40
579 585 9.857656 AGGCATCTCAAGATAATAATCAAGAAA 57.142 29.630 0.00 0.00 34.28 2.52
637 648 4.347607 CATCCCCTCTTTCTTCAACCATT 58.652 43.478 0.00 0.00 0.00 3.16
642 653 4.459337 CCCTCTTTCTTCAACCATTGGTAC 59.541 45.833 9.20 0.00 33.12 3.34
648 659 7.776030 TCTTTCTTCAACCATTGGTACTTTACA 59.224 33.333 9.20 0.00 33.12 2.41
762 781 0.419459 AGAGAAGATCCCACCCACCT 59.581 55.000 0.00 0.00 0.00 4.00
767 786 3.015145 ATCCCACCCACCTTCCCG 61.015 66.667 0.00 0.00 0.00 5.14
780 799 0.912486 CTTCCCGTTCCATTCTCCCT 59.088 55.000 0.00 0.00 0.00 4.20
781 800 0.909623 TTCCCGTTCCATTCTCCCTC 59.090 55.000 0.00 0.00 0.00 4.30
782 801 0.042731 TCCCGTTCCATTCTCCCTCT 59.957 55.000 0.00 0.00 0.00 3.69
783 802 0.466124 CCCGTTCCATTCTCCCTCTC 59.534 60.000 0.00 0.00 0.00 3.20
784 803 1.490574 CCGTTCCATTCTCCCTCTCT 58.509 55.000 0.00 0.00 0.00 3.10
785 804 1.410882 CCGTTCCATTCTCCCTCTCTC 59.589 57.143 0.00 0.00 0.00 3.20
786 805 1.066303 CGTTCCATTCTCCCTCTCTCG 59.934 57.143 0.00 0.00 0.00 4.04
787 806 1.115467 TTCCATTCTCCCTCTCTCGC 58.885 55.000 0.00 0.00 0.00 5.03
815 834 2.147150 GACAACTGCAGTCTTCCCTTC 58.853 52.381 21.95 5.28 33.29 3.46
821 840 1.201429 GCAGTCTTCCCTTCCCCTCA 61.201 60.000 0.00 0.00 0.00 3.86
908 927 2.048877 TCGCCGAGAAACCCGAAC 60.049 61.111 0.00 0.00 0.00 3.95
944 985 0.679640 TTGCCTATTGCTCCAACCGG 60.680 55.000 0.00 0.00 42.00 5.28
1041 1084 0.537653 GTTCCTGCTCCTCTACCCAC 59.462 60.000 0.00 0.00 0.00 4.61
1233 1291 0.036858 GCCTATGGAGAGGAATCGGC 60.037 60.000 0.00 0.00 39.15 5.54
1251 1309 1.199615 GCTGCTCCCCTTCTAACTCT 58.800 55.000 0.00 0.00 0.00 3.24
1269 1327 2.826725 CTCTAGTTCCTTCTCGGTGGTT 59.173 50.000 0.00 0.00 0.00 3.67
1272 1330 2.606378 AGTTCCTTCTCGGTGGTTACT 58.394 47.619 0.00 0.00 0.00 2.24
1491 1825 3.611970 TCTCTCGGATTTCTCTCGACTT 58.388 45.455 0.00 0.00 0.00 3.01
1542 1876 0.182537 CTGGAACTGTGACCACCCAA 59.817 55.000 3.41 0.00 32.44 4.12
1751 2086 1.733912 CACTGGTGATGTCGTTGATGG 59.266 52.381 0.00 0.00 0.00 3.51
1972 2307 0.032615 ACCCTCTGATCTCCTCGCTT 60.033 55.000 0.00 0.00 0.00 4.68
2105 2447 2.431454 CCATCCCGGACACCATCGA 61.431 63.158 0.73 0.00 36.56 3.59
2474 2821 3.304928 CCAGTTTCAGTCAGTTCATTGCC 60.305 47.826 0.00 0.00 0.00 4.52
2481 2828 1.728971 GTCAGTTCATTGCCGTCTCTG 59.271 52.381 0.00 0.00 0.00 3.35
2697 3044 1.610102 GGTCTGCAGAGCTTGACACAT 60.610 52.381 33.19 0.00 39.31 3.21
2781 3128 4.412796 TGATAGCAGTGGAAATCCTGAG 57.587 45.455 0.44 0.00 36.82 3.35
2843 3190 3.261897 AGTGGGAAGACAAGGACACATAG 59.738 47.826 0.00 0.00 0.00 2.23
2872 3219 7.751732 TGTGATTATTGTTGCTATTGTCAGTC 58.248 34.615 0.00 0.00 0.00 3.51
2994 3341 3.955145 TCAAGTCATTGACGGCCAT 57.045 47.368 11.01 0.00 40.54 4.40
3036 3383 2.887152 GCACACCTCTGGAATTGACTTT 59.113 45.455 0.00 0.00 0.00 2.66
3295 3642 1.319541 TGCGTACCTCCTCTATGAGC 58.680 55.000 0.00 0.00 0.00 4.26
3309 3656 1.755179 ATGAGCATGTGTACAAGGGC 58.245 50.000 0.00 1.03 0.00 5.19
3423 3770 0.674581 TTCTTCATGGGCGCACTCAG 60.675 55.000 12.74 0.00 0.00 3.35
3495 3842 3.465871 GAATGAGCCTCAGATTGGAGAC 58.534 50.000 0.00 0.00 37.05 3.36
3589 3936 5.298527 GGCTATATTCCACCAGGTAAAACAC 59.701 44.000 0.00 0.00 35.89 3.32
3744 4093 7.337689 TCTCTTAATGTGCTTGACTGCAAATAT 59.662 33.333 0.00 0.00 45.12 1.28
3786 4135 3.824001 TCCATCTTCCCCATTGTTCAA 57.176 42.857 0.00 0.00 0.00 2.69
3915 4264 2.755103 CTGCCATCCAAACTAAAGGGTC 59.245 50.000 0.00 0.00 0.00 4.46
3955 4304 7.840342 ATAGTTCAAACAGATAACTGCTCTG 57.160 36.000 0.00 0.00 46.95 3.35
3956 4305 5.858381 AGTTCAAACAGATAACTGCTCTGA 58.142 37.500 6.89 0.00 46.95 3.27
3957 4306 5.931146 AGTTCAAACAGATAACTGCTCTGAG 59.069 40.000 6.89 0.00 46.95 3.35
3961 4310 2.568956 ACAGATAACTGCTCTGAGGCAA 59.431 45.455 6.83 0.00 46.95 4.52
3963 4312 3.373439 CAGATAACTGCTCTGAGGCAAAC 59.627 47.826 6.83 0.00 42.22 2.93
3964 4313 3.262915 AGATAACTGCTCTGAGGCAAACT 59.737 43.478 6.83 0.00 41.94 2.66
3965 4314 4.467795 AGATAACTGCTCTGAGGCAAACTA 59.532 41.667 6.83 0.00 41.94 2.24
3966 4315 2.758736 ACTGCTCTGAGGCAAACTAG 57.241 50.000 6.83 0.00 41.94 2.57
3967 4316 1.338579 ACTGCTCTGAGGCAAACTAGC 60.339 52.381 6.83 0.00 41.94 3.42
3968 4317 0.979665 TGCTCTGAGGCAAACTAGCT 59.020 50.000 6.83 0.00 39.43 3.32
3969 4318 1.349026 TGCTCTGAGGCAAACTAGCTT 59.651 47.619 6.83 0.00 39.43 3.74
3970 4319 2.006169 GCTCTGAGGCAAACTAGCTTC 58.994 52.381 6.83 0.00 40.63 3.86
3973 4322 2.899900 TCTGAGGCAAACTAGCTTCTCA 59.100 45.455 0.00 0.00 40.82 3.27
3974 4323 3.324846 TCTGAGGCAAACTAGCTTCTCAA 59.675 43.478 0.00 0.00 40.82 3.02
3976 4325 2.744741 GAGGCAAACTAGCTTCTCAACC 59.255 50.000 0.00 0.00 37.60 3.77
3977 4326 1.464997 GGCAAACTAGCTTCTCAACCG 59.535 52.381 0.00 0.00 34.17 4.44
3978 4327 1.464997 GCAAACTAGCTTCTCAACCGG 59.535 52.381 0.00 0.00 0.00 5.28
3980 4329 2.457366 AACTAGCTTCTCAACCGGTG 57.543 50.000 8.52 2.16 0.00 4.94
3981 4330 0.037232 ACTAGCTTCTCAACCGGTGC 60.037 55.000 8.52 5.93 0.00 5.01
4005 4354 2.008268 GCCCCCATGACAATCTTGCG 62.008 60.000 0.00 0.00 0.00 4.85
4076 4425 8.581578 ACTAACACCAAATATCACCGAATTTTT 58.418 29.630 0.00 0.00 0.00 1.94
4115 4464 1.139058 ACTATGAGGTTGACGATGGCC 59.861 52.381 0.00 0.00 0.00 5.36
4121 4470 1.451387 GTTGACGATGGCCGGGAAT 60.451 57.895 2.18 0.00 43.93 3.01
4308 4657 2.937149 CAGATGCTGTCAGTCCTCAATG 59.063 50.000 0.93 0.00 0.00 2.82
4462 4811 5.634118 TGGATGGAGTCTGACATTTTCTTT 58.366 37.500 10.88 0.00 0.00 2.52
4476 4825 5.748152 ACATTTTCTTTGTTTGTGGATGTCG 59.252 36.000 0.00 0.00 0.00 4.35
4490 4839 3.964688 TGGATGTCGGTATACAGGTGATT 59.035 43.478 5.01 0.00 31.70 2.57
4552 4901 5.907391 GGTGACGAGTTTGAATTGTTAAGTG 59.093 40.000 0.00 0.00 0.00 3.16
4619 4968 5.648092 AGTGATGGTTATTAGCAAACCTGAC 59.352 40.000 6.56 1.46 45.53 3.51
4681 5030 5.598830 TGGTAATGGGCAGTTCAACTAAAAA 59.401 36.000 0.00 0.00 0.00 1.94
4682 5031 6.268847 TGGTAATGGGCAGTTCAACTAAAAAT 59.731 34.615 0.00 0.00 0.00 1.82
4746 5095 3.669536 TCACTTTGTGTGTTCTGTGACA 58.330 40.909 0.00 0.00 46.27 3.58
4802 5154 7.918643 ACAATTTTGGATTTGTTGTTGTGATC 58.081 30.769 0.00 0.00 32.28 2.92
4810 5162 0.040425 GTTGTTGTGATCGTGGGCAC 60.040 55.000 0.00 0.00 35.63 5.01
4833 5185 2.771943 CAAGTAACTAGAGGATGCCCCA 59.228 50.000 0.00 0.00 37.41 4.96
4854 5206 1.215117 CATTGCGGCGGAAATTGGT 59.785 52.632 19.64 0.00 0.00 3.67
4872 5224 9.719355 GAAATTGGTTAATTTTGGGTTGATAGT 57.281 29.630 0.00 0.00 44.35 2.12
4888 5240 9.403583 GGGTTGATAGTATGAGAACCAAAATTA 57.596 33.333 13.57 0.00 38.26 1.40
4944 5296 1.872773 TTTTTGAACAAGGGCAGGGT 58.127 45.000 0.00 0.00 0.00 4.34
4945 5297 1.408969 TTTTGAACAAGGGCAGGGTC 58.591 50.000 0.00 0.00 0.00 4.46
4946 5298 0.469144 TTTGAACAAGGGCAGGGTCC 60.469 55.000 0.00 0.00 0.00 4.46
4947 5299 1.650242 TTGAACAAGGGCAGGGTCCA 61.650 55.000 0.00 0.00 0.00 4.02
4948 5300 1.152830 GAACAAGGGCAGGGTCCAA 59.847 57.895 0.00 0.00 0.00 3.53
4949 5301 0.469144 GAACAAGGGCAGGGTCCAAA 60.469 55.000 0.00 0.00 0.00 3.28
4950 5302 0.031616 AACAAGGGCAGGGTCCAAAA 60.032 50.000 0.00 0.00 0.00 2.44
4951 5303 0.469892 ACAAGGGCAGGGTCCAAAAG 60.470 55.000 0.00 0.00 0.00 2.27
4952 5304 1.156095 AAGGGCAGGGTCCAAAAGG 59.844 57.895 0.00 0.00 0.00 3.11
4953 5305 1.368268 AAGGGCAGGGTCCAAAAGGA 61.368 55.000 0.00 0.00 0.00 3.36
4954 5306 1.606601 GGGCAGGGTCCAAAAGGAC 60.607 63.158 6.11 6.11 38.09 3.85
4961 5313 3.341263 GTCCAAAAGGACCCCAGAC 57.659 57.895 3.27 0.00 33.21 3.51
4962 5314 0.771755 GTCCAAAAGGACCCCAGACT 59.228 55.000 3.27 0.00 33.21 3.24
4963 5315 1.145119 GTCCAAAAGGACCCCAGACTT 59.855 52.381 3.27 0.00 33.21 3.01
4964 5316 1.856920 TCCAAAAGGACCCCAGACTTT 59.143 47.619 0.00 0.00 36.09 2.66
4965 5317 3.057586 TCCAAAAGGACCCCAGACTTTA 58.942 45.455 0.00 0.00 33.64 1.85
4966 5318 3.660669 TCCAAAAGGACCCCAGACTTTAT 59.339 43.478 0.00 0.00 33.64 1.40
4967 5319 4.107311 TCCAAAAGGACCCCAGACTTTATT 59.893 41.667 0.00 0.00 33.64 1.40
4968 5320 4.838423 CCAAAAGGACCCCAGACTTTATTT 59.162 41.667 0.00 0.00 33.64 1.40
4969 5321 5.279456 CCAAAAGGACCCCAGACTTTATTTG 60.279 44.000 0.00 0.00 33.64 2.32
4970 5322 5.333566 AAAGGACCCCAGACTTTATTTGA 57.666 39.130 0.00 0.00 33.05 2.69
4971 5323 5.536497 AAGGACCCCAGACTTTATTTGAT 57.464 39.130 0.00 0.00 0.00 2.57
4972 5324 6.652205 AAGGACCCCAGACTTTATTTGATA 57.348 37.500 0.00 0.00 0.00 2.15
4973 5325 6.848562 AGGACCCCAGACTTTATTTGATAT 57.151 37.500 0.00 0.00 0.00 1.63
4974 5326 7.226059 AGGACCCCAGACTTTATTTGATATT 57.774 36.000 0.00 0.00 0.00 1.28
4975 5327 8.344939 AGGACCCCAGACTTTATTTGATATTA 57.655 34.615 0.00 0.00 0.00 0.98
4976 5328 8.218488 AGGACCCCAGACTTTATTTGATATTAC 58.782 37.037 0.00 0.00 0.00 1.89
4977 5329 7.996644 GGACCCCAGACTTTATTTGATATTACA 59.003 37.037 0.00 0.00 0.00 2.41
4978 5330 9.403583 GACCCCAGACTTTATTTGATATTACAA 57.596 33.333 0.00 0.00 0.00 2.41
4979 5331 9.936329 ACCCCAGACTTTATTTGATATTACAAT 57.064 29.630 0.00 0.00 0.00 2.71
4993 5345 9.467258 TTGATATTACAATACCGTAGTACAAGC 57.533 33.333 0.38 0.00 0.00 4.01
4994 5346 8.084073 TGATATTACAATACCGTAGTACAAGCC 58.916 37.037 0.38 0.00 0.00 4.35
4995 5347 5.657826 TTACAATACCGTAGTACAAGCCA 57.342 39.130 0.38 0.00 0.00 4.75
4996 5348 4.119442 ACAATACCGTAGTACAAGCCAG 57.881 45.455 0.38 0.00 0.00 4.85
4997 5349 3.765511 ACAATACCGTAGTACAAGCCAGA 59.234 43.478 0.38 0.00 0.00 3.86
4998 5350 4.221262 ACAATACCGTAGTACAAGCCAGAA 59.779 41.667 0.38 0.00 0.00 3.02
4999 5351 2.738013 ACCGTAGTACAAGCCAGAAC 57.262 50.000 0.38 0.00 0.00 3.01
5000 5352 1.965643 ACCGTAGTACAAGCCAGAACA 59.034 47.619 0.38 0.00 0.00 3.18
5001 5353 2.366266 ACCGTAGTACAAGCCAGAACAA 59.634 45.455 0.38 0.00 0.00 2.83
5002 5354 2.735134 CCGTAGTACAAGCCAGAACAAC 59.265 50.000 0.38 0.00 0.00 3.32
5003 5355 3.386486 CGTAGTACAAGCCAGAACAACA 58.614 45.455 0.38 0.00 0.00 3.33
5004 5356 3.428870 CGTAGTACAAGCCAGAACAACAG 59.571 47.826 0.38 0.00 0.00 3.16
5005 5357 2.851195 AGTACAAGCCAGAACAACAGG 58.149 47.619 0.00 0.00 0.00 4.00
5006 5358 2.438021 AGTACAAGCCAGAACAACAGGA 59.562 45.455 0.00 0.00 0.00 3.86
5007 5359 1.680338 ACAAGCCAGAACAACAGGAC 58.320 50.000 0.00 0.00 0.00 3.85
5008 5360 1.064758 ACAAGCCAGAACAACAGGACA 60.065 47.619 0.00 0.00 0.00 4.02
5009 5361 1.334869 CAAGCCAGAACAACAGGACAC 59.665 52.381 0.00 0.00 0.00 3.67
5010 5362 0.546122 AGCCAGAACAACAGGACACA 59.454 50.000 0.00 0.00 0.00 3.72
5011 5363 0.663153 GCCAGAACAACAGGACACAC 59.337 55.000 0.00 0.00 0.00 3.82
5012 5364 2.016604 GCCAGAACAACAGGACACACA 61.017 52.381 0.00 0.00 0.00 3.72
5013 5365 2.364632 CCAGAACAACAGGACACACAA 58.635 47.619 0.00 0.00 0.00 3.33
5014 5366 2.097466 CCAGAACAACAGGACACACAAC 59.903 50.000 0.00 0.00 0.00 3.32
5015 5367 2.746904 CAGAACAACAGGACACACAACA 59.253 45.455 0.00 0.00 0.00 3.33
5016 5368 3.190327 CAGAACAACAGGACACACAACAA 59.810 43.478 0.00 0.00 0.00 2.83
5017 5369 3.823873 AGAACAACAGGACACACAACAAA 59.176 39.130 0.00 0.00 0.00 2.83
5018 5370 3.569250 ACAACAGGACACACAACAAAC 57.431 42.857 0.00 0.00 0.00 2.93
5019 5371 3.153919 ACAACAGGACACACAACAAACT 58.846 40.909 0.00 0.00 0.00 2.66
5020 5372 3.057596 ACAACAGGACACACAACAAACTG 60.058 43.478 0.00 0.00 0.00 3.16
5021 5373 3.066291 ACAGGACACACAACAAACTGA 57.934 42.857 0.00 0.00 0.00 3.41
5022 5374 3.417101 ACAGGACACACAACAAACTGAA 58.583 40.909 0.00 0.00 0.00 3.02
5023 5375 3.823873 ACAGGACACACAACAAACTGAAA 59.176 39.130 0.00 0.00 0.00 2.69
5024 5376 4.279671 ACAGGACACACAACAAACTGAAAA 59.720 37.500 0.00 0.00 0.00 2.29
5025 5377 5.047377 ACAGGACACACAACAAACTGAAAAT 60.047 36.000 0.00 0.00 0.00 1.82
5026 5378 5.868801 CAGGACACACAACAAACTGAAAATT 59.131 36.000 0.00 0.00 0.00 1.82
5027 5379 7.032580 CAGGACACACAACAAACTGAAAATTA 58.967 34.615 0.00 0.00 0.00 1.40
5028 5380 7.009174 CAGGACACACAACAAACTGAAAATTAC 59.991 37.037 0.00 0.00 0.00 1.89
5029 5381 6.809196 GGACACACAACAAACTGAAAATTACA 59.191 34.615 0.00 0.00 0.00 2.41
5030 5382 7.329717 GGACACACAACAAACTGAAAATTACAA 59.670 33.333 0.00 0.00 0.00 2.41
5031 5383 8.594881 ACACACAACAAACTGAAAATTACAAA 57.405 26.923 0.00 0.00 0.00 2.83
5032 5384 8.707839 ACACACAACAAACTGAAAATTACAAAG 58.292 29.630 0.00 0.00 0.00 2.77
5033 5385 7.687757 CACACAACAAACTGAAAATTACAAAGC 59.312 33.333 0.00 0.00 0.00 3.51
5034 5386 7.386299 ACACAACAAACTGAAAATTACAAAGCA 59.614 29.630 0.00 0.00 0.00 3.91
5035 5387 7.899330 CACAACAAACTGAAAATTACAAAGCAG 59.101 33.333 0.00 0.00 0.00 4.24
5036 5388 7.602265 ACAACAAACTGAAAATTACAAAGCAGT 59.398 29.630 0.00 0.00 38.14 4.40
5037 5389 7.755582 ACAAACTGAAAATTACAAAGCAGTC 57.244 32.000 0.00 0.00 35.73 3.51
5038 5390 6.756542 ACAAACTGAAAATTACAAAGCAGTCC 59.243 34.615 0.00 0.00 35.73 3.85
5039 5391 5.453567 ACTGAAAATTACAAAGCAGTCCC 57.546 39.130 0.00 0.00 31.54 4.46
5040 5392 5.140454 ACTGAAAATTACAAAGCAGTCCCT 58.860 37.500 0.00 0.00 31.54 4.20
5041 5393 5.010012 ACTGAAAATTACAAAGCAGTCCCTG 59.990 40.000 0.00 0.00 31.54 4.45
5042 5394 5.136828 TGAAAATTACAAAGCAGTCCCTGA 58.863 37.500 0.00 0.00 32.44 3.86
5043 5395 5.596361 TGAAAATTACAAAGCAGTCCCTGAA 59.404 36.000 0.00 0.00 32.44 3.02
5044 5396 6.097554 TGAAAATTACAAAGCAGTCCCTGAAA 59.902 34.615 0.00 0.00 32.44 2.69
5045 5397 6.670695 AAATTACAAAGCAGTCCCTGAAAT 57.329 33.333 0.00 0.00 32.44 2.17
5046 5398 7.775053 AAATTACAAAGCAGTCCCTGAAATA 57.225 32.000 0.00 0.00 32.44 1.40
5047 5399 7.961326 AATTACAAAGCAGTCCCTGAAATAT 57.039 32.000 0.00 0.00 32.44 1.28
5048 5400 6.757897 TTACAAAGCAGTCCCTGAAATATG 57.242 37.500 0.00 0.00 32.44 1.78
5049 5401 3.445096 ACAAAGCAGTCCCTGAAATATGC 59.555 43.478 0.00 0.00 32.44 3.14
5050 5402 3.370840 AAGCAGTCCCTGAAATATGCA 57.629 42.857 0.00 0.00 36.15 3.96
5051 5403 2.928334 AGCAGTCCCTGAAATATGCAG 58.072 47.619 0.00 0.00 36.15 4.41
5052 5404 2.507058 AGCAGTCCCTGAAATATGCAGA 59.493 45.455 7.28 0.00 36.15 4.26
5053 5405 3.054139 AGCAGTCCCTGAAATATGCAGAA 60.054 43.478 7.28 0.00 36.15 3.02
5054 5406 3.696051 GCAGTCCCTGAAATATGCAGAAA 59.304 43.478 7.28 0.00 35.39 2.52
5055 5407 4.201990 GCAGTCCCTGAAATATGCAGAAAG 60.202 45.833 7.28 0.00 35.39 2.62
5056 5408 4.337555 CAGTCCCTGAAATATGCAGAAAGG 59.662 45.833 7.28 0.00 35.39 3.11
5057 5409 4.228210 AGTCCCTGAAATATGCAGAAAGGA 59.772 41.667 7.28 3.79 35.39 3.36
5058 5410 4.336713 GTCCCTGAAATATGCAGAAAGGAC 59.663 45.833 12.63 12.63 36.10 3.85
5059 5411 3.633986 CCCTGAAATATGCAGAAAGGACC 59.366 47.826 7.28 0.00 35.39 4.46
5060 5412 3.633986 CCTGAAATATGCAGAAAGGACCC 59.366 47.826 7.28 0.00 35.39 4.46
5061 5413 3.631250 TGAAATATGCAGAAAGGACCCC 58.369 45.455 0.00 0.00 0.00 4.95
5062 5414 3.011144 TGAAATATGCAGAAAGGACCCCA 59.989 43.478 0.00 0.00 0.00 4.96
5063 5415 3.756082 AATATGCAGAAAGGACCCCAA 57.244 42.857 0.00 0.00 0.00 4.12
5064 5416 3.756082 ATATGCAGAAAGGACCCCAAA 57.244 42.857 0.00 0.00 0.00 3.28
5065 5417 1.928868 ATGCAGAAAGGACCCCAAAG 58.071 50.000 0.00 0.00 0.00 2.77
5066 5418 0.850100 TGCAGAAAGGACCCCAAAGA 59.150 50.000 0.00 0.00 0.00 2.52
5067 5419 1.428912 TGCAGAAAGGACCCCAAAGAT 59.571 47.619 0.00 0.00 0.00 2.40
5068 5420 2.095461 GCAGAAAGGACCCCAAAGATC 58.905 52.381 0.00 0.00 0.00 2.75
5069 5421 2.291217 GCAGAAAGGACCCCAAAGATCT 60.291 50.000 0.00 0.00 0.00 2.75
5070 5422 3.350833 CAGAAAGGACCCCAAAGATCTG 58.649 50.000 0.00 0.00 0.00 2.90
5071 5423 3.009473 CAGAAAGGACCCCAAAGATCTGA 59.991 47.826 0.00 0.00 36.11 3.27
5072 5424 3.657727 AGAAAGGACCCCAAAGATCTGAA 59.342 43.478 0.00 0.00 0.00 3.02
5073 5425 3.728385 AAGGACCCCAAAGATCTGAAG 57.272 47.619 0.00 0.00 0.00 3.02
5074 5426 2.921221 AGGACCCCAAAGATCTGAAGA 58.079 47.619 0.00 0.00 0.00 2.87
5075 5427 2.843113 AGGACCCCAAAGATCTGAAGAG 59.157 50.000 0.00 0.00 0.00 2.85
5076 5428 2.092699 GGACCCCAAAGATCTGAAGAGG 60.093 54.545 0.00 0.00 0.00 3.69
5077 5429 2.840651 GACCCCAAAGATCTGAAGAGGA 59.159 50.000 0.00 0.00 0.00 3.71
5078 5430 3.260205 ACCCCAAAGATCTGAAGAGGAA 58.740 45.455 0.00 0.00 0.00 3.36
5079 5431 3.009584 ACCCCAAAGATCTGAAGAGGAAC 59.990 47.826 0.00 0.00 0.00 3.62
5080 5432 3.265791 CCCAAAGATCTGAAGAGGAACG 58.734 50.000 0.00 0.00 0.00 3.95
5081 5433 2.675348 CCAAAGATCTGAAGAGGAACGC 59.325 50.000 0.00 0.00 0.00 4.84
5082 5434 3.329386 CAAAGATCTGAAGAGGAACGCA 58.671 45.455 0.00 0.00 0.00 5.24
5083 5435 3.685139 AAGATCTGAAGAGGAACGCAA 57.315 42.857 0.00 0.00 0.00 4.85
5084 5436 3.902881 AGATCTGAAGAGGAACGCAAT 57.097 42.857 0.00 0.00 0.00 3.56
5085 5437 3.791245 AGATCTGAAGAGGAACGCAATC 58.209 45.455 0.00 0.00 0.00 2.67
5086 5438 3.196469 AGATCTGAAGAGGAACGCAATCA 59.804 43.478 0.00 0.00 0.00 2.57
5087 5439 2.964740 TCTGAAGAGGAACGCAATCAG 58.035 47.619 0.00 0.00 42.32 2.90
5088 5440 2.005451 CTGAAGAGGAACGCAATCAGG 58.995 52.381 0.00 0.00 39.34 3.86
5089 5441 1.347707 TGAAGAGGAACGCAATCAGGT 59.652 47.619 0.00 0.00 0.00 4.00
5090 5442 2.003301 GAAGAGGAACGCAATCAGGTC 58.997 52.381 0.00 0.00 0.00 3.85
5091 5443 0.250513 AGAGGAACGCAATCAGGTCC 59.749 55.000 0.00 0.00 45.59 4.46
5092 5444 4.713946 GGAACGCAATCAGGTCCA 57.286 55.556 0.00 0.00 44.64 4.02
5093 5445 2.941210 GGAACGCAATCAGGTCCAA 58.059 52.632 0.00 0.00 44.64 3.53
5094 5446 0.804989 GGAACGCAATCAGGTCCAAG 59.195 55.000 0.00 0.00 44.64 3.61
5095 5447 0.169009 GAACGCAATCAGGTCCAAGC 59.831 55.000 0.00 0.00 0.00 4.01
5096 5448 1.244019 AACGCAATCAGGTCCAAGCC 61.244 55.000 0.00 0.00 0.00 4.35
5097 5449 1.675310 CGCAATCAGGTCCAAGCCA 60.675 57.895 0.00 0.00 0.00 4.75
5098 5450 1.885871 GCAATCAGGTCCAAGCCAC 59.114 57.895 0.00 0.00 0.00 5.01
5099 5451 0.610232 GCAATCAGGTCCAAGCCACT 60.610 55.000 0.00 0.00 0.00 4.00
5100 5452 1.457346 CAATCAGGTCCAAGCCACTC 58.543 55.000 0.00 0.00 0.00 3.51
5101 5453 0.329596 AATCAGGTCCAAGCCACTCC 59.670 55.000 0.00 0.00 0.00 3.85
5102 5454 1.566298 ATCAGGTCCAAGCCACTCCC 61.566 60.000 0.00 0.00 0.00 4.30
5103 5455 3.322466 AGGTCCAAGCCACTCCCG 61.322 66.667 0.00 0.00 0.00 5.14
5104 5456 3.319198 GGTCCAAGCCACTCCCGA 61.319 66.667 0.00 0.00 0.00 5.14
5105 5457 2.670148 GGTCCAAGCCACTCCCGAT 61.670 63.158 0.00 0.00 0.00 4.18
5106 5458 1.153349 GTCCAAGCCACTCCCGATC 60.153 63.158 0.00 0.00 0.00 3.69
5107 5459 2.202932 CCAAGCCACTCCCGATCG 60.203 66.667 8.51 8.51 0.00 3.69
5108 5460 2.721167 CCAAGCCACTCCCGATCGA 61.721 63.158 18.66 0.00 0.00 3.59
5109 5461 1.519455 CAAGCCACTCCCGATCGAC 60.519 63.158 18.66 0.00 0.00 4.20
5110 5462 1.682684 AAGCCACTCCCGATCGACT 60.683 57.895 18.66 0.00 0.00 4.18
5111 5463 1.668101 AAGCCACTCCCGATCGACTC 61.668 60.000 18.66 0.00 0.00 3.36
5112 5464 3.121019 CCACTCCCGATCGACTCC 58.879 66.667 18.66 0.00 0.00 3.85
5113 5465 1.753078 CCACTCCCGATCGACTCCA 60.753 63.158 18.66 0.00 0.00 3.86
5114 5466 1.320344 CCACTCCCGATCGACTCCAA 61.320 60.000 18.66 0.00 0.00 3.53
5115 5467 0.530744 CACTCCCGATCGACTCCAAA 59.469 55.000 18.66 0.00 0.00 3.28
5116 5468 0.531200 ACTCCCGATCGACTCCAAAC 59.469 55.000 18.66 0.00 0.00 2.93
5117 5469 0.818296 CTCCCGATCGACTCCAAACT 59.182 55.000 18.66 0.00 0.00 2.66
5118 5470 0.815734 TCCCGATCGACTCCAAACTC 59.184 55.000 18.66 0.00 0.00 3.01
5119 5471 0.525668 CCCGATCGACTCCAAACTCG 60.526 60.000 18.66 0.00 0.00 4.18
5120 5472 1.140407 CCGATCGACTCCAAACTCGC 61.140 60.000 18.66 0.00 0.00 5.03
5121 5473 1.140407 CGATCGACTCCAAACTCGCC 61.140 60.000 10.26 0.00 0.00 5.54
5122 5474 1.140407 GATCGACTCCAAACTCGCCG 61.140 60.000 0.00 0.00 0.00 6.46
5123 5475 2.558554 ATCGACTCCAAACTCGCCGG 62.559 60.000 0.00 0.00 0.00 6.13
5124 5476 3.119096 GACTCCAAACTCGCCGGC 61.119 66.667 19.07 19.07 0.00 6.13
5125 5477 3.591254 GACTCCAAACTCGCCGGCT 62.591 63.158 26.68 1.82 0.00 5.52
5126 5478 2.815647 CTCCAAACTCGCCGGCTC 60.816 66.667 26.68 0.00 0.00 4.70
5127 5479 4.388499 TCCAAACTCGCCGGCTCC 62.388 66.667 26.68 0.00 0.00 4.70
5138 5490 4.530857 CGGCTCCGGGGACATCAC 62.531 72.222 8.62 0.00 35.56 3.06
5139 5491 4.176752 GGCTCCGGGGACATCACC 62.177 72.222 4.80 0.00 35.61 4.02
5140 5492 3.399181 GCTCCGGGGACATCACCA 61.399 66.667 4.80 0.00 40.22 4.17
5141 5493 2.584608 CTCCGGGGACATCACCAC 59.415 66.667 0.00 0.00 40.22 4.16
5142 5494 1.990060 CTCCGGGGACATCACCACT 60.990 63.158 0.00 0.00 40.22 4.00
5143 5495 1.537889 TCCGGGGACATCACCACTT 60.538 57.895 0.00 0.00 40.22 3.16
5144 5496 1.377202 CCGGGGACATCACCACTTG 60.377 63.158 0.13 0.00 40.22 3.16
5145 5497 1.377202 CGGGGACATCACCACTTGG 60.377 63.158 0.13 0.00 40.22 3.61
5155 5507 3.048602 CCACTTGGTCCGACGAGT 58.951 61.111 0.00 1.47 35.47 4.18
5156 5508 1.366366 CCACTTGGTCCGACGAGTT 59.634 57.895 0.00 0.00 32.78 3.01
5157 5509 0.666577 CCACTTGGTCCGACGAGTTC 60.667 60.000 0.00 0.00 32.78 3.01
5158 5510 0.314302 CACTTGGTCCGACGAGTTCT 59.686 55.000 0.00 0.00 32.78 3.01
5159 5511 1.038280 ACTTGGTCCGACGAGTTCTT 58.962 50.000 0.00 0.00 30.94 2.52
5160 5512 1.000496 ACTTGGTCCGACGAGTTCTTC 60.000 52.381 0.00 0.00 30.94 2.87
5161 5513 1.000607 CTTGGTCCGACGAGTTCTTCA 60.001 52.381 0.00 0.00 0.00 3.02
5162 5514 0.313043 TGGTCCGACGAGTTCTTCAC 59.687 55.000 0.00 0.00 0.00 3.18
5163 5515 0.388263 GGTCCGACGAGTTCTTCACC 60.388 60.000 0.00 0.00 0.00 4.02
5164 5516 0.728466 GTCCGACGAGTTCTTCACCG 60.728 60.000 0.00 0.00 0.00 4.94
5165 5517 2.087009 CCGACGAGTTCTTCACCGC 61.087 63.158 0.00 0.00 0.00 5.68
5166 5518 1.371267 CGACGAGTTCTTCACCGCA 60.371 57.895 0.00 0.00 0.00 5.69
5167 5519 1.337817 CGACGAGTTCTTCACCGCAG 61.338 60.000 0.00 0.00 0.00 5.18
5168 5520 1.618640 GACGAGTTCTTCACCGCAGC 61.619 60.000 0.00 0.00 0.00 5.25
5169 5521 1.664649 CGAGTTCTTCACCGCAGCA 60.665 57.895 0.00 0.00 0.00 4.41
5170 5522 1.221466 CGAGTTCTTCACCGCAGCAA 61.221 55.000 0.00 0.00 0.00 3.91
5171 5523 0.514691 GAGTTCTTCACCGCAGCAAG 59.485 55.000 0.00 0.00 0.00 4.01
5172 5524 1.081840 GTTCTTCACCGCAGCAAGC 60.082 57.895 0.00 0.00 40.87 4.01
5173 5525 2.260869 TTCTTCACCGCAGCAAGCC 61.261 57.895 0.00 0.00 41.38 4.35
5174 5526 2.956799 TTCTTCACCGCAGCAAGCCA 62.957 55.000 0.00 0.00 41.38 4.75
5175 5527 2.282391 TTCACCGCAGCAAGCCAT 60.282 55.556 0.00 0.00 41.38 4.40
5176 5528 2.537792 CTTCACCGCAGCAAGCCATG 62.538 60.000 0.00 0.00 41.38 3.66
5177 5529 3.057548 CACCGCAGCAAGCCATGA 61.058 61.111 0.00 0.00 41.38 3.07
5178 5530 2.282391 ACCGCAGCAAGCCATGAA 60.282 55.556 0.00 0.00 41.38 2.57
5179 5531 2.180017 CCGCAGCAAGCCATGAAC 59.820 61.111 0.00 0.00 41.38 3.18
5180 5532 2.628696 CCGCAGCAAGCCATGAACA 61.629 57.895 0.00 0.00 41.38 3.18
5181 5533 1.509463 CGCAGCAAGCCATGAACAT 59.491 52.632 0.00 0.00 41.38 2.71
5182 5534 0.524816 CGCAGCAAGCCATGAACATC 60.525 55.000 0.00 0.00 41.38 3.06
5183 5535 0.524816 GCAGCAAGCCATGAACATCG 60.525 55.000 0.00 0.00 37.23 3.84
5184 5536 1.089112 CAGCAAGCCATGAACATCGA 58.911 50.000 0.00 0.00 0.00 3.59
5185 5537 1.674441 CAGCAAGCCATGAACATCGAT 59.326 47.619 0.00 0.00 0.00 3.59
5186 5538 1.945394 AGCAAGCCATGAACATCGATC 59.055 47.619 0.00 0.00 0.00 3.69
5187 5539 1.945394 GCAAGCCATGAACATCGATCT 59.055 47.619 0.00 0.00 0.00 2.75
5188 5540 3.133691 GCAAGCCATGAACATCGATCTA 58.866 45.455 0.00 0.00 0.00 1.98
5189 5541 3.186001 GCAAGCCATGAACATCGATCTAG 59.814 47.826 0.00 0.00 0.00 2.43
5190 5542 4.625028 CAAGCCATGAACATCGATCTAGA 58.375 43.478 0.00 0.00 0.00 2.43
5191 5543 4.517952 AGCCATGAACATCGATCTAGAG 57.482 45.455 0.00 0.00 0.00 2.43
5192 5544 3.894427 AGCCATGAACATCGATCTAGAGT 59.106 43.478 0.00 0.00 0.00 3.24
5193 5545 5.073428 AGCCATGAACATCGATCTAGAGTA 58.927 41.667 0.00 0.00 0.00 2.59
5194 5546 5.182950 AGCCATGAACATCGATCTAGAGTAG 59.817 44.000 0.00 0.00 0.00 2.57
5195 5547 5.398169 CCATGAACATCGATCTAGAGTAGC 58.602 45.833 0.00 0.00 0.00 3.58
5196 5548 5.048434 CCATGAACATCGATCTAGAGTAGCA 60.048 44.000 0.00 0.00 0.00 3.49
5197 5549 5.425577 TGAACATCGATCTAGAGTAGCAC 57.574 43.478 0.00 0.00 0.00 4.40
5198 5550 5.126779 TGAACATCGATCTAGAGTAGCACT 58.873 41.667 0.00 0.00 0.00 4.40
5199 5551 5.008118 TGAACATCGATCTAGAGTAGCACTG 59.992 44.000 0.00 0.00 0.00 3.66
5200 5552 3.252215 ACATCGATCTAGAGTAGCACTGC 59.748 47.826 0.00 0.00 0.00 4.40
5201 5553 2.222886 TCGATCTAGAGTAGCACTGCC 58.777 52.381 0.00 0.00 0.00 4.85
5202 5554 2.158740 TCGATCTAGAGTAGCACTGCCT 60.159 50.000 0.00 0.00 0.00 4.75
5203 5555 2.225491 CGATCTAGAGTAGCACTGCCTC 59.775 54.545 0.00 0.00 0.00 4.70
5204 5556 2.060050 TCTAGAGTAGCACTGCCTCC 57.940 55.000 0.00 0.00 0.00 4.30
5205 5557 1.036707 CTAGAGTAGCACTGCCTCCC 58.963 60.000 0.00 0.00 0.00 4.30
5206 5558 0.335019 TAGAGTAGCACTGCCTCCCA 59.665 55.000 0.00 0.00 0.00 4.37
5207 5559 0.326048 AGAGTAGCACTGCCTCCCAT 60.326 55.000 0.00 0.00 0.00 4.00
5208 5560 1.062886 AGAGTAGCACTGCCTCCCATA 60.063 52.381 0.00 0.00 0.00 2.74
5209 5561 1.974236 GAGTAGCACTGCCTCCCATAT 59.026 52.381 0.00 0.00 0.00 1.78
5210 5562 3.165875 GAGTAGCACTGCCTCCCATATA 58.834 50.000 0.00 0.00 0.00 0.86
5211 5563 3.169099 AGTAGCACTGCCTCCCATATAG 58.831 50.000 0.00 0.00 0.00 1.31
5212 5564 0.689623 AGCACTGCCTCCCATATAGC 59.310 55.000 0.00 0.00 0.00 2.97
5213 5565 0.689623 GCACTGCCTCCCATATAGCT 59.310 55.000 0.00 0.00 0.00 3.32
5214 5566 1.072965 GCACTGCCTCCCATATAGCTT 59.927 52.381 0.00 0.00 0.00 3.74
5215 5567 2.873649 GCACTGCCTCCCATATAGCTTC 60.874 54.545 0.00 0.00 0.00 3.86
5216 5568 2.369860 CACTGCCTCCCATATAGCTTCA 59.630 50.000 0.00 0.00 0.00 3.02
5217 5569 3.048600 ACTGCCTCCCATATAGCTTCAA 58.951 45.455 0.00 0.00 0.00 2.69
5218 5570 3.072184 ACTGCCTCCCATATAGCTTCAAG 59.928 47.826 0.00 0.00 0.00 3.02
5219 5571 2.373169 TGCCTCCCATATAGCTTCAAGG 59.627 50.000 0.00 0.00 0.00 3.61
5220 5572 2.877708 GCCTCCCATATAGCTTCAAGGC 60.878 54.545 0.00 0.00 41.05 4.35
5221 5573 2.641815 CCTCCCATATAGCTTCAAGGCT 59.358 50.000 0.00 0.00 45.29 4.58
5222 5574 3.840666 CCTCCCATATAGCTTCAAGGCTA 59.159 47.826 0.00 0.00 46.82 3.93
5223 5575 4.081198 CCTCCCATATAGCTTCAAGGCTAG 60.081 50.000 0.00 0.00 46.13 3.42
5224 5576 3.840666 TCCCATATAGCTTCAAGGCTAGG 59.159 47.826 0.00 0.00 46.13 3.02
5225 5577 3.840666 CCCATATAGCTTCAAGGCTAGGA 59.159 47.826 0.00 0.00 46.13 2.94
5226 5578 4.081198 CCCATATAGCTTCAAGGCTAGGAG 60.081 50.000 0.00 0.00 46.13 3.69
5227 5579 4.081198 CCATATAGCTTCAAGGCTAGGAGG 60.081 50.000 0.00 0.00 46.13 4.30
5228 5580 2.848678 TAGCTTCAAGGCTAGGAGGA 57.151 50.000 0.00 0.00 42.97 3.71
5229 5581 1.958288 AGCTTCAAGGCTAGGAGGAA 58.042 50.000 2.93 0.00 41.16 3.36
5230 5582 1.836802 AGCTTCAAGGCTAGGAGGAAG 59.163 52.381 2.93 0.00 41.16 3.46
5231 5583 1.834263 GCTTCAAGGCTAGGAGGAAGA 59.166 52.381 13.46 0.00 37.70 2.87
5232 5584 2.158971 GCTTCAAGGCTAGGAGGAAGAG 60.159 54.545 13.46 0.78 37.70 2.85
5233 5585 2.166907 TCAAGGCTAGGAGGAAGAGG 57.833 55.000 0.00 0.00 0.00 3.69
5234 5586 1.362932 TCAAGGCTAGGAGGAAGAGGT 59.637 52.381 0.00 0.00 0.00 3.85
5235 5587 2.192263 CAAGGCTAGGAGGAAGAGGTT 58.808 52.381 0.00 0.00 0.00 3.50
5236 5588 2.573915 CAAGGCTAGGAGGAAGAGGTTT 59.426 50.000 0.00 0.00 0.00 3.27
5237 5589 2.192263 AGGCTAGGAGGAAGAGGTTTG 58.808 52.381 0.00 0.00 0.00 2.93
5238 5590 1.210722 GGCTAGGAGGAAGAGGTTTGG 59.789 57.143 0.00 0.00 0.00 3.28
5239 5591 1.407575 GCTAGGAGGAAGAGGTTTGGC 60.408 57.143 0.00 0.00 0.00 4.52
5240 5592 1.210722 CTAGGAGGAAGAGGTTTGGCC 59.789 57.143 0.00 0.00 37.58 5.36
5241 5593 1.377333 GGAGGAAGAGGTTTGGCCG 60.377 63.158 0.00 0.00 43.70 6.13
5242 5594 2.034221 AGGAAGAGGTTTGGCCGC 59.966 61.111 0.00 0.00 43.70 6.53
5243 5595 3.062466 GGAAGAGGTTTGGCCGCC 61.062 66.667 1.04 1.04 43.70 6.13
5244 5596 3.062466 GAAGAGGTTTGGCCGCCC 61.062 66.667 7.03 0.00 43.70 6.13
5245 5597 3.569200 GAAGAGGTTTGGCCGCCCT 62.569 63.158 7.03 7.35 43.70 5.19
5246 5598 3.146828 AAGAGGTTTGGCCGCCCTT 62.147 57.895 7.03 8.34 43.70 3.95
5247 5599 3.062466 GAGGTTTGGCCGCCCTTC 61.062 66.667 7.03 0.00 43.70 3.46
5259 5611 3.324713 CCCTTCGGCCAGAGGATT 58.675 61.111 20.33 0.00 0.00 3.01
5260 5612 1.147153 CCCTTCGGCCAGAGGATTC 59.853 63.158 20.33 0.00 0.00 2.52
5261 5613 1.227380 CCTTCGGCCAGAGGATTCG 60.227 63.158 14.85 0.00 0.00 3.34
5262 5614 1.227380 CTTCGGCCAGAGGATTCGG 60.227 63.158 2.24 0.00 0.00 4.30
5263 5615 1.961180 CTTCGGCCAGAGGATTCGGT 61.961 60.000 2.24 0.00 0.00 4.69
5264 5616 2.202932 CGGCCAGAGGATTCGGTG 60.203 66.667 2.24 0.00 0.00 4.94
5265 5617 2.190578 GGCCAGAGGATTCGGTGG 59.809 66.667 0.00 0.00 0.00 4.61
5267 5619 2.202932 CCAGAGGATTCGGTGGCG 60.203 66.667 0.00 0.00 0.00 5.69
5268 5620 2.892425 CAGAGGATTCGGTGGCGC 60.892 66.667 0.00 0.00 0.00 6.53
5269 5621 4.514577 AGAGGATTCGGTGGCGCG 62.515 66.667 0.00 0.00 0.00 6.86
5316 5668 2.595463 AGCGCCAAAGCTCAAGCA 60.595 55.556 2.29 0.00 45.67 3.91
5317 5669 2.429739 GCGCCAAAGCTCAAGCAC 60.430 61.111 4.59 0.00 45.16 4.40
5318 5670 2.256461 CGCCAAAGCTCAAGCACC 59.744 61.111 4.59 0.00 45.16 5.01
5319 5671 2.554636 CGCCAAAGCTCAAGCACCA 61.555 57.895 4.59 0.00 45.16 4.17
5320 5672 1.870055 CGCCAAAGCTCAAGCACCAT 61.870 55.000 4.59 0.00 45.16 3.55
5321 5673 0.108945 GCCAAAGCTCAAGCACCATC 60.109 55.000 4.59 0.00 45.16 3.51
5322 5674 0.169672 CCAAAGCTCAAGCACCATCG 59.830 55.000 4.59 0.00 45.16 3.84
5323 5675 1.159285 CAAAGCTCAAGCACCATCGA 58.841 50.000 4.59 0.00 45.16 3.59
5324 5676 1.741706 CAAAGCTCAAGCACCATCGAT 59.258 47.619 4.59 0.00 45.16 3.59
5325 5677 1.376543 AAGCTCAAGCACCATCGATG 58.623 50.000 18.76 18.76 45.16 3.84
5326 5678 0.538584 AGCTCAAGCACCATCGATGA 59.461 50.000 26.86 4.64 45.16 2.92
5327 5679 1.140452 AGCTCAAGCACCATCGATGAT 59.860 47.619 26.86 6.74 45.16 2.45
5328 5680 1.945394 GCTCAAGCACCATCGATGATT 59.055 47.619 26.86 10.24 41.59 2.57
5329 5681 2.357009 GCTCAAGCACCATCGATGATTT 59.643 45.455 26.86 11.56 41.59 2.17
5330 5682 3.791122 GCTCAAGCACCATCGATGATTTG 60.791 47.826 26.86 20.96 41.59 2.32
5331 5683 2.097954 TCAAGCACCATCGATGATTTGC 59.902 45.455 26.86 26.57 0.00 3.68
5332 5684 2.048444 AGCACCATCGATGATTTGCT 57.952 45.000 28.81 28.81 35.09 3.91
5333 5685 1.945394 AGCACCATCGATGATTTGCTC 59.055 47.619 28.81 13.37 34.99 4.26
5334 5686 1.945394 GCACCATCGATGATTTGCTCT 59.055 47.619 26.86 0.00 0.00 4.09
5335 5687 2.286831 GCACCATCGATGATTTGCTCTG 60.287 50.000 26.86 8.82 0.00 3.35
5336 5688 2.289820 CACCATCGATGATTTGCTCTGG 59.710 50.000 26.86 9.87 0.00 3.86
5337 5689 2.171237 ACCATCGATGATTTGCTCTGGA 59.829 45.455 26.86 0.00 0.00 3.86
5338 5690 3.208594 CCATCGATGATTTGCTCTGGAA 58.791 45.455 26.86 0.00 0.00 3.53
5339 5691 3.003068 CCATCGATGATTTGCTCTGGAAC 59.997 47.826 26.86 0.00 0.00 3.62
5340 5692 2.632377 TCGATGATTTGCTCTGGAACC 58.368 47.619 0.00 0.00 0.00 3.62
5341 5693 1.328680 CGATGATTTGCTCTGGAACCG 59.671 52.381 0.00 0.00 0.00 4.44
5342 5694 1.672881 GATGATTTGCTCTGGAACCGG 59.327 52.381 0.00 0.00 0.00 5.28
5343 5695 0.400213 TGATTTGCTCTGGAACCGGT 59.600 50.000 0.00 0.00 0.00 5.28
5344 5696 1.087501 GATTTGCTCTGGAACCGGTC 58.912 55.000 8.04 0.72 0.00 4.79
5345 5697 0.673644 ATTTGCTCTGGAACCGGTCG 60.674 55.000 8.04 0.00 0.00 4.79
5346 5698 3.876589 TTGCTCTGGAACCGGTCGC 62.877 63.158 8.04 2.56 0.00 5.19
5347 5699 4.373116 GCTCTGGAACCGGTCGCA 62.373 66.667 8.04 1.71 0.00 5.10
5348 5700 2.342279 CTCTGGAACCGGTCGCAA 59.658 61.111 8.04 0.00 0.00 4.85
5349 5701 1.738099 CTCTGGAACCGGTCGCAAG 60.738 63.158 8.04 6.51 0.00 4.01
5364 5716 3.999229 CGCAAGAACAGTCTTCATACC 57.001 47.619 0.00 0.00 42.45 2.73
5365 5717 3.325870 CGCAAGAACAGTCTTCATACCA 58.674 45.455 0.00 0.00 42.45 3.25
5366 5718 3.369147 CGCAAGAACAGTCTTCATACCAG 59.631 47.826 0.00 0.00 42.45 4.00
5367 5719 4.319177 GCAAGAACAGTCTTCATACCAGT 58.681 43.478 0.00 0.00 42.45 4.00
5368 5720 4.390297 GCAAGAACAGTCTTCATACCAGTC 59.610 45.833 0.00 0.00 42.45 3.51
5369 5721 4.810191 AGAACAGTCTTCATACCAGTCC 57.190 45.455 0.00 0.00 0.00 3.85
5370 5722 3.515901 AGAACAGTCTTCATACCAGTCCC 59.484 47.826 0.00 0.00 0.00 4.46
5371 5723 3.191888 ACAGTCTTCATACCAGTCCCT 57.808 47.619 0.00 0.00 0.00 4.20
5372 5724 2.834549 ACAGTCTTCATACCAGTCCCTG 59.165 50.000 0.00 0.00 0.00 4.45
5373 5725 2.834549 CAGTCTTCATACCAGTCCCTGT 59.165 50.000 0.00 0.00 0.00 4.00
5374 5726 3.100671 AGTCTTCATACCAGTCCCTGTC 58.899 50.000 0.00 0.00 0.00 3.51
5375 5727 2.100197 TCTTCATACCAGTCCCTGTCG 58.900 52.381 0.00 0.00 0.00 4.35
5376 5728 2.100197 CTTCATACCAGTCCCTGTCGA 58.900 52.381 0.00 0.00 0.00 4.20
5377 5729 1.471119 TCATACCAGTCCCTGTCGAC 58.529 55.000 9.11 9.11 0.00 4.20
5378 5730 1.005569 TCATACCAGTCCCTGTCGACT 59.994 52.381 17.92 0.00 44.03 4.18
5379 5731 1.825474 CATACCAGTCCCTGTCGACTT 59.175 52.381 17.92 0.00 41.23 3.01
5380 5732 1.254026 TACCAGTCCCTGTCGACTTG 58.746 55.000 17.92 9.48 41.23 3.16
5381 5733 0.469331 ACCAGTCCCTGTCGACTTGA 60.469 55.000 17.92 7.59 41.23 3.02
5389 5741 4.355925 GTCGACTTGACCACCACC 57.644 61.111 8.70 0.00 42.04 4.61
5390 5742 1.444250 GTCGACTTGACCACCACCA 59.556 57.895 8.70 0.00 42.04 4.17
5391 5743 0.034896 GTCGACTTGACCACCACCAT 59.965 55.000 8.70 0.00 42.04 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 75 7.490402 AGTTTCTGTTTTTCAGCAAGATCAAAG 59.510 33.333 0.00 0.00 43.32 2.77
188 191 7.894376 AATTCTGAAAAATTAGGACGTCGTA 57.106 32.000 13.68 13.68 0.00 3.43
192 195 8.417884 TCCAAAAATTCTGAAAAATTAGGACGT 58.582 29.630 0.00 0.00 0.00 4.34
285 289 2.071688 ACAAGCACACAACGCAAAAA 57.928 40.000 0.00 0.00 0.00 1.94
286 290 2.071688 AACAAGCACACAACGCAAAA 57.928 40.000 0.00 0.00 0.00 2.44
325 329 9.211485 CTTTTCTATGGCAAAAACTCATCAAAT 57.789 29.630 0.00 0.00 0.00 2.32
394 399 8.152246 ACCACTACTATAAGTACTGTTGCAAAA 58.848 33.333 0.00 0.00 0.00 2.44
450 455 5.508200 TCACACAAAACTCAACAATACCC 57.492 39.130 0.00 0.00 0.00 3.69
454 459 7.322664 ACTTCAATCACACAAAACTCAACAAT 58.677 30.769 0.00 0.00 0.00 2.71
492 497 7.384524 TTCCTTCATCCATCATAAGATCACT 57.615 36.000 0.00 0.00 30.20 3.41
533 538 0.179045 CGGACATCCCCAAGCTTAGG 60.179 60.000 3.60 3.60 0.00 2.69
549 554 6.211384 TGATTATTATCTTGAGATGCCTCGGA 59.789 38.462 3.79 0.00 42.33 4.55
571 576 7.693969 ACTTAGTTGCTTGCTATTTCTTGAT 57.306 32.000 0.00 0.00 0.00 2.57
579 585 3.763897 CCCCAAACTTAGTTGCTTGCTAT 59.236 43.478 0.00 0.00 0.00 2.97
609 615 2.744352 AGAAAGAGGGGATGCCATTC 57.256 50.000 5.30 1.93 0.00 2.67
762 781 0.909623 GAGGGAGAATGGAACGGGAA 59.090 55.000 0.00 0.00 0.00 3.97
767 786 1.202475 GCGAGAGAGGGAGAATGGAAC 60.202 57.143 0.00 0.00 0.00 3.62
780 799 1.000163 GTTGTCCAGTCTTGCGAGAGA 60.000 52.381 3.10 0.00 31.07 3.10
781 800 1.000283 AGTTGTCCAGTCTTGCGAGAG 60.000 52.381 3.10 0.00 31.07 3.20
782 801 1.040646 AGTTGTCCAGTCTTGCGAGA 58.959 50.000 0.00 0.00 0.00 4.04
783 802 1.143305 CAGTTGTCCAGTCTTGCGAG 58.857 55.000 0.00 0.00 0.00 5.03
784 803 0.880278 GCAGTTGTCCAGTCTTGCGA 60.880 55.000 0.00 0.00 0.00 5.10
785 804 1.159713 TGCAGTTGTCCAGTCTTGCG 61.160 55.000 0.00 0.00 0.00 4.85
786 805 0.590195 CTGCAGTTGTCCAGTCTTGC 59.410 55.000 5.25 0.00 0.00 4.01
787 806 1.959042 ACTGCAGTTGTCCAGTCTTG 58.041 50.000 15.25 0.00 37.77 3.02
815 834 0.966920 ACGAGTGTTGTAGTGAGGGG 59.033 55.000 0.00 0.00 0.00 4.79
821 840 3.119919 GGATTCGAGACGAGTGTTGTAGT 60.120 47.826 0.00 0.00 37.14 2.73
882 901 1.609635 TTTCTCGGCGACCATGGCTA 61.610 55.000 13.04 0.00 0.00 3.93
891 910 2.048877 GTTCGGGTTTCTCGGCGA 60.049 61.111 10.14 10.14 0.00 5.54
944 985 1.823041 GCTCCCTGCTGATCTTGGC 60.823 63.158 0.00 0.00 38.95 4.52
1166 1224 2.590007 CTGAGCCCACATAGCGCC 60.590 66.667 2.29 0.00 34.64 6.53
1233 1291 3.637769 ACTAGAGTTAGAAGGGGAGCAG 58.362 50.000 0.00 0.00 0.00 4.24
1251 1309 3.508793 CAGTAACCACCGAGAAGGAACTA 59.491 47.826 0.00 0.00 45.00 2.24
1269 1327 5.592054 CAGCCAGATAAATCGACTTCAGTA 58.408 41.667 0.00 0.00 0.00 2.74
1272 1330 3.118629 AGCAGCCAGATAAATCGACTTCA 60.119 43.478 0.00 0.00 0.00 3.02
1476 1810 3.878160 ACCTCAAGTCGAGAGAAATCC 57.122 47.619 1.91 0.00 45.45 3.01
1491 1825 4.420206 TGAAGGAGAGATCAAGAACCTCA 58.580 43.478 0.00 0.00 0.00 3.86
1542 1876 5.431765 CTCAACCTAGGCATAACACTCAAT 58.568 41.667 9.30 0.00 0.00 2.57
1751 2086 3.860930 TTGGGCAGCTTCCGGAACC 62.861 63.158 14.35 13.04 0.00 3.62
1837 2172 2.733593 AAACCGAGTGAGCGTCGC 60.734 61.111 9.80 9.80 36.06 5.19
1893 2228 5.794687 TCTTCACATGCTTTGTAATACCG 57.205 39.130 0.00 0.00 36.57 4.02
1972 2307 4.416516 TCAACAGTCTCCAATCCTACAGA 58.583 43.478 0.00 0.00 0.00 3.41
2105 2447 4.368003 CCAAGGCCAAGGCATCAT 57.632 55.556 13.87 0.00 44.11 2.45
2697 3044 6.252599 AGGTGATTATGAGATAGCACCAAA 57.747 37.500 11.52 0.00 41.03 3.28
2710 3057 4.171234 AGGGACCCAGATAGGTGATTATG 58.829 47.826 14.60 0.00 41.42 1.90
2781 3128 4.072131 TGTTTTCCCTGTCATCTGTAAGC 58.928 43.478 0.00 0.00 0.00 3.09
2843 3190 7.807433 TGACAATAGCAACAATAATCACAACAC 59.193 33.333 0.00 0.00 0.00 3.32
2872 3219 1.605710 CAAGCACAGTCCAACAAGAGG 59.394 52.381 0.00 0.00 0.00 3.69
2994 3341 4.277921 TGCACACTGCTCATTGTTATGAAA 59.722 37.500 0.00 0.00 45.31 2.69
3036 3383 4.503910 AGACTGCTTTCATTGCATACGTA 58.496 39.130 0.00 0.00 39.86 3.57
3295 3642 0.605319 ACCGTGCCCTTGTACACATG 60.605 55.000 0.00 0.00 36.57 3.21
3309 3656 0.782384 GCAGTAAGTCGAACACCGTG 59.218 55.000 0.00 0.00 39.75 4.94
3423 3770 0.729690 GATCAAGAAGCAGAACCGGC 59.270 55.000 0.00 0.00 0.00 6.13
3495 3842 9.173939 GGATCGATAATTTTGTAAAGCTCAATG 57.826 33.333 0.00 0.00 0.00 2.82
3589 3936 8.706936 CAAACTGAATCAGAATATGAGGATACG 58.293 37.037 18.20 0.00 42.53 3.06
3687 4036 9.500785 TCTACAAACAAGAAACATATGACATGA 57.499 29.630 10.38 0.00 0.00 3.07
3719 4068 4.754372 TTGCAGTCAAGCACATTAAGAG 57.246 40.909 0.00 0.00 45.61 2.85
3744 4093 3.552132 TTTGGAGCTAATATCCACGCA 57.448 42.857 0.00 0.00 46.46 5.24
3750 4099 7.121907 GGGAAGATGGAATTTGGAGCTAATATC 59.878 40.741 0.00 0.00 0.00 1.63
3753 4102 5.143369 GGGAAGATGGAATTTGGAGCTAAT 58.857 41.667 0.00 0.00 0.00 1.73
3786 4135 7.173907 CAGGAAACAAGATGATACTTCAAGTGT 59.826 37.037 0.00 0.00 34.96 3.55
3915 4264 6.757897 TGAACTATTATTTGCCCTGTTGAG 57.242 37.500 0.00 0.00 0.00 3.02
3952 4301 2.899900 TGAGAAGCTAGTTTGCCTCAGA 59.100 45.455 6.62 0.00 31.24 3.27
3953 4302 3.325293 TGAGAAGCTAGTTTGCCTCAG 57.675 47.619 6.62 0.00 31.24 3.35
3954 4303 3.403038 GTTGAGAAGCTAGTTTGCCTCA 58.597 45.455 6.62 6.62 32.33 3.86
3955 4304 2.744741 GGTTGAGAAGCTAGTTTGCCTC 59.255 50.000 0.00 0.00 0.00 4.70
3956 4305 2.784347 GGTTGAGAAGCTAGTTTGCCT 58.216 47.619 0.00 0.00 0.00 4.75
3957 4306 1.464997 CGGTTGAGAAGCTAGTTTGCC 59.535 52.381 0.00 0.00 0.00 4.52
3961 4310 1.608283 GCACCGGTTGAGAAGCTAGTT 60.608 52.381 2.97 0.00 0.00 2.24
3963 4312 0.741221 GGCACCGGTTGAGAAGCTAG 60.741 60.000 2.97 0.00 0.00 3.42
3964 4313 1.295423 GGCACCGGTTGAGAAGCTA 59.705 57.895 2.97 0.00 0.00 3.32
3965 4314 2.032681 GGCACCGGTTGAGAAGCT 59.967 61.111 2.97 0.00 0.00 3.74
3966 4315 3.056328 GGGCACCGGTTGAGAAGC 61.056 66.667 2.97 3.50 40.86 3.86
3978 4327 4.380945 TCATGGGGGCTTGGGCAC 62.381 66.667 0.00 0.00 42.01 5.01
3980 4329 3.903281 TTGTCATGGGGGCTTGGGC 62.903 63.158 0.00 0.00 37.82 5.36
3981 4330 1.002017 ATTGTCATGGGGGCTTGGG 59.998 57.895 0.00 0.00 0.00 4.12
4115 4464 4.881850 ACTCCAAAGCTATAAACATTCCCG 59.118 41.667 0.00 0.00 0.00 5.14
4121 4470 9.515226 AGTAAAATGACTCCAAAGCTATAAACA 57.485 29.630 0.00 0.00 0.00 2.83
4308 4657 0.790814 GTAACACAGGAGAGCGCAAC 59.209 55.000 11.47 2.78 0.00 4.17
4462 4811 4.500127 CTGTATACCGACATCCACAAACA 58.500 43.478 0.00 0.00 0.00 2.83
4476 4825 9.367444 GCACTATACAATAATCACCTGTATACC 57.633 37.037 0.00 0.00 37.43 2.73
4619 4968 6.420604 ACGAATTAACCAGAAAAACAATGCAG 59.579 34.615 0.00 0.00 0.00 4.41
4781 5133 5.518128 CACGATCACAACAACAAATCCAAAA 59.482 36.000 0.00 0.00 0.00 2.44
4802 5154 2.230508 TCTAGTTACTTGAGTGCCCACG 59.769 50.000 0.00 0.00 36.20 4.94
4810 5162 3.070302 GGGGCATCCTCTAGTTACTTGAG 59.930 52.174 15.08 15.08 34.18 3.02
4833 5185 0.806884 CAATTTCCGCCGCAATGCAT 60.807 50.000 5.91 0.00 0.00 3.96
4842 5194 3.687212 CCCAAAATTAACCAATTTCCGCC 59.313 43.478 0.00 0.00 42.29 6.13
4925 5277 1.760029 GACCCTGCCCTTGTTCAAAAA 59.240 47.619 0.00 0.00 0.00 1.94
4926 5278 1.408969 GACCCTGCCCTTGTTCAAAA 58.591 50.000 0.00 0.00 0.00 2.44
4927 5279 0.469144 GGACCCTGCCCTTGTTCAAA 60.469 55.000 0.00 0.00 0.00 2.69
4928 5280 1.152830 GGACCCTGCCCTTGTTCAA 59.847 57.895 0.00 0.00 0.00 2.69
4929 5281 1.650242 TTGGACCCTGCCCTTGTTCA 61.650 55.000 0.00 0.00 0.00 3.18
4930 5282 0.469144 TTTGGACCCTGCCCTTGTTC 60.469 55.000 0.00 0.00 0.00 3.18
4931 5283 0.031616 TTTTGGACCCTGCCCTTGTT 60.032 50.000 0.00 0.00 0.00 2.83
4932 5284 0.469892 CTTTTGGACCCTGCCCTTGT 60.470 55.000 0.00 0.00 0.00 3.16
4933 5285 1.187567 CCTTTTGGACCCTGCCCTTG 61.188 60.000 0.00 0.00 44.07 3.61
4934 5286 1.156095 CCTTTTGGACCCTGCCCTT 59.844 57.895 0.00 0.00 44.07 3.95
4935 5287 1.778383 TCCTTTTGGACCCTGCCCT 60.778 57.895 0.00 0.00 45.19 5.19
4936 5288 2.851045 TCCTTTTGGACCCTGCCC 59.149 61.111 0.00 0.00 45.19 5.36
4945 5297 2.381752 AAAGTCTGGGGTCCTTTTGG 57.618 50.000 0.00 0.00 42.21 3.28
4946 5298 5.538433 TCAAATAAAGTCTGGGGTCCTTTTG 59.462 40.000 0.00 0.00 31.33 2.44
4947 5299 5.711698 TCAAATAAAGTCTGGGGTCCTTTT 58.288 37.500 0.00 0.00 31.33 2.27
4948 5300 5.333566 TCAAATAAAGTCTGGGGTCCTTT 57.666 39.130 0.00 0.00 33.32 3.11
4949 5301 5.536497 ATCAAATAAAGTCTGGGGTCCTT 57.464 39.130 0.00 0.00 0.00 3.36
4950 5302 6.848562 ATATCAAATAAAGTCTGGGGTCCT 57.151 37.500 0.00 0.00 0.00 3.85
4951 5303 7.996644 TGTAATATCAAATAAAGTCTGGGGTCC 59.003 37.037 0.00 0.00 0.00 4.46
4952 5304 8.974060 TGTAATATCAAATAAAGTCTGGGGTC 57.026 34.615 0.00 0.00 0.00 4.46
4953 5305 9.936329 ATTGTAATATCAAATAAAGTCTGGGGT 57.064 29.630 0.00 0.00 0.00 4.95
4967 5319 9.467258 GCTTGTACTACGGTATTGTAATATCAA 57.533 33.333 0.00 0.00 0.00 2.57
4968 5320 8.084073 GGCTTGTACTACGGTATTGTAATATCA 58.916 37.037 0.00 0.00 0.00 2.15
4969 5321 8.084073 TGGCTTGTACTACGGTATTGTAATATC 58.916 37.037 0.00 0.00 0.00 1.63
4970 5322 7.954835 TGGCTTGTACTACGGTATTGTAATAT 58.045 34.615 0.00 0.00 0.00 1.28
4971 5323 7.285172 TCTGGCTTGTACTACGGTATTGTAATA 59.715 37.037 0.00 0.00 0.00 0.98
4972 5324 6.097270 TCTGGCTTGTACTACGGTATTGTAAT 59.903 38.462 0.00 0.00 0.00 1.89
4973 5325 5.418524 TCTGGCTTGTACTACGGTATTGTAA 59.581 40.000 0.00 0.00 0.00 2.41
4974 5326 4.949238 TCTGGCTTGTACTACGGTATTGTA 59.051 41.667 0.00 0.00 0.00 2.41
4975 5327 3.765511 TCTGGCTTGTACTACGGTATTGT 59.234 43.478 0.00 0.00 0.00 2.71
4976 5328 4.380841 TCTGGCTTGTACTACGGTATTG 57.619 45.455 0.00 0.00 0.00 1.90
4977 5329 4.221262 TGTTCTGGCTTGTACTACGGTATT 59.779 41.667 0.00 0.00 0.00 1.89
4978 5330 3.765511 TGTTCTGGCTTGTACTACGGTAT 59.234 43.478 0.00 0.00 0.00 2.73
4979 5331 3.156293 TGTTCTGGCTTGTACTACGGTA 58.844 45.455 0.00 0.00 0.00 4.02
4980 5332 1.965643 TGTTCTGGCTTGTACTACGGT 59.034 47.619 0.00 0.00 0.00 4.83
4981 5333 2.735134 GTTGTTCTGGCTTGTACTACGG 59.265 50.000 0.00 0.00 0.00 4.02
4982 5334 3.386486 TGTTGTTCTGGCTTGTACTACG 58.614 45.455 0.00 0.00 0.00 3.51
4983 5335 3.746492 CCTGTTGTTCTGGCTTGTACTAC 59.254 47.826 0.00 0.00 0.00 2.73
4984 5336 3.644265 TCCTGTTGTTCTGGCTTGTACTA 59.356 43.478 0.00 0.00 35.49 1.82
4985 5337 2.438021 TCCTGTTGTTCTGGCTTGTACT 59.562 45.455 0.00 0.00 35.49 2.73
4986 5338 2.548480 GTCCTGTTGTTCTGGCTTGTAC 59.452 50.000 0.00 0.00 35.49 2.90
4987 5339 2.171659 TGTCCTGTTGTTCTGGCTTGTA 59.828 45.455 0.00 0.00 35.49 2.41
4988 5340 1.064758 TGTCCTGTTGTTCTGGCTTGT 60.065 47.619 0.00 0.00 35.49 3.16
4989 5341 1.334869 GTGTCCTGTTGTTCTGGCTTG 59.665 52.381 0.00 0.00 35.49 4.01
4990 5342 1.064758 TGTGTCCTGTTGTTCTGGCTT 60.065 47.619 0.00 0.00 35.49 4.35
4991 5343 0.546122 TGTGTCCTGTTGTTCTGGCT 59.454 50.000 0.00 0.00 35.49 4.75
4992 5344 0.663153 GTGTGTCCTGTTGTTCTGGC 59.337 55.000 0.00 0.00 35.49 4.85
4993 5345 2.036958 TGTGTGTCCTGTTGTTCTGG 57.963 50.000 0.00 0.00 36.63 3.86
4994 5346 2.746904 TGTTGTGTGTCCTGTTGTTCTG 59.253 45.455 0.00 0.00 0.00 3.02
4995 5347 3.066291 TGTTGTGTGTCCTGTTGTTCT 57.934 42.857 0.00 0.00 0.00 3.01
4996 5348 3.840890 TTGTTGTGTGTCCTGTTGTTC 57.159 42.857 0.00 0.00 0.00 3.18
4997 5349 3.572255 AGTTTGTTGTGTGTCCTGTTGTT 59.428 39.130 0.00 0.00 0.00 2.83
4998 5350 3.057596 CAGTTTGTTGTGTGTCCTGTTGT 60.058 43.478 0.00 0.00 0.00 3.32
4999 5351 3.190327 TCAGTTTGTTGTGTGTCCTGTTG 59.810 43.478 0.00 0.00 0.00 3.33
5000 5352 3.417101 TCAGTTTGTTGTGTGTCCTGTT 58.583 40.909 0.00 0.00 0.00 3.16
5001 5353 3.066291 TCAGTTTGTTGTGTGTCCTGT 57.934 42.857 0.00 0.00 0.00 4.00
5002 5354 4.433186 TTTCAGTTTGTTGTGTGTCCTG 57.567 40.909 0.00 0.00 0.00 3.86
5003 5355 5.659440 ATTTTCAGTTTGTTGTGTGTCCT 57.341 34.783 0.00 0.00 0.00 3.85
5004 5356 6.809196 TGTAATTTTCAGTTTGTTGTGTGTCC 59.191 34.615 0.00 0.00 0.00 4.02
5005 5357 7.804614 TGTAATTTTCAGTTTGTTGTGTGTC 57.195 32.000 0.00 0.00 0.00 3.67
5006 5358 8.594881 TTTGTAATTTTCAGTTTGTTGTGTGT 57.405 26.923 0.00 0.00 0.00 3.72
5007 5359 7.687757 GCTTTGTAATTTTCAGTTTGTTGTGTG 59.312 33.333 0.00 0.00 0.00 3.82
5008 5360 7.386299 TGCTTTGTAATTTTCAGTTTGTTGTGT 59.614 29.630 0.00 0.00 0.00 3.72
5009 5361 7.737395 TGCTTTGTAATTTTCAGTTTGTTGTG 58.263 30.769 0.00 0.00 0.00 3.33
5010 5362 7.602265 ACTGCTTTGTAATTTTCAGTTTGTTGT 59.398 29.630 0.00 0.00 31.51 3.32
5011 5363 7.962917 ACTGCTTTGTAATTTTCAGTTTGTTG 58.037 30.769 0.00 0.00 31.51 3.33
5012 5364 7.277760 GGACTGCTTTGTAATTTTCAGTTTGTT 59.722 33.333 0.00 0.00 35.23 2.83
5013 5365 6.756542 GGACTGCTTTGTAATTTTCAGTTTGT 59.243 34.615 0.00 0.00 35.23 2.83
5014 5366 6.200854 GGGACTGCTTTGTAATTTTCAGTTTG 59.799 38.462 0.00 0.00 35.23 2.93
5015 5367 6.098266 AGGGACTGCTTTGTAATTTTCAGTTT 59.902 34.615 0.00 0.00 37.18 2.66
5016 5368 5.598417 AGGGACTGCTTTGTAATTTTCAGTT 59.402 36.000 0.00 0.00 37.18 3.16
5017 5369 5.140454 AGGGACTGCTTTGTAATTTTCAGT 58.860 37.500 0.00 0.00 37.18 3.41
5018 5370 5.712152 AGGGACTGCTTTGTAATTTTCAG 57.288 39.130 0.00 0.00 37.18 3.02
5034 5386 4.228210 TCCTTTCTGCATATTTCAGGGACT 59.772 41.667 0.00 0.00 43.88 3.85
5035 5387 4.336713 GTCCTTTCTGCATATTTCAGGGAC 59.663 45.833 10.29 10.29 35.15 4.46
5036 5388 4.526970 GTCCTTTCTGCATATTTCAGGGA 58.473 43.478 0.00 0.00 32.63 4.20
5037 5389 3.633986 GGTCCTTTCTGCATATTTCAGGG 59.366 47.826 0.00 0.00 32.63 4.45
5038 5390 3.633986 GGGTCCTTTCTGCATATTTCAGG 59.366 47.826 0.00 0.00 32.63 3.86
5039 5391 3.633986 GGGGTCCTTTCTGCATATTTCAG 59.366 47.826 0.00 0.00 0.00 3.02
5040 5392 3.011144 TGGGGTCCTTTCTGCATATTTCA 59.989 43.478 0.00 0.00 0.00 2.69
5041 5393 3.631250 TGGGGTCCTTTCTGCATATTTC 58.369 45.455 0.00 0.00 0.00 2.17
5042 5394 3.756082 TGGGGTCCTTTCTGCATATTT 57.244 42.857 0.00 0.00 0.00 1.40
5043 5395 3.756082 TTGGGGTCCTTTCTGCATATT 57.244 42.857 0.00 0.00 0.00 1.28
5044 5396 3.269381 TCTTTGGGGTCCTTTCTGCATAT 59.731 43.478 0.00 0.00 0.00 1.78
5045 5397 2.647299 TCTTTGGGGTCCTTTCTGCATA 59.353 45.455 0.00 0.00 0.00 3.14
5046 5398 1.428912 TCTTTGGGGTCCTTTCTGCAT 59.571 47.619 0.00 0.00 0.00 3.96
5047 5399 0.850100 TCTTTGGGGTCCTTTCTGCA 59.150 50.000 0.00 0.00 0.00 4.41
5048 5400 2.095461 GATCTTTGGGGTCCTTTCTGC 58.905 52.381 0.00 0.00 0.00 4.26
5049 5401 3.009473 TCAGATCTTTGGGGTCCTTTCTG 59.991 47.826 0.00 0.00 0.00 3.02
5050 5402 3.260205 TCAGATCTTTGGGGTCCTTTCT 58.740 45.455 0.00 0.00 0.00 2.52
5051 5403 3.721087 TCAGATCTTTGGGGTCCTTTC 57.279 47.619 0.00 0.00 0.00 2.62
5052 5404 3.657727 TCTTCAGATCTTTGGGGTCCTTT 59.342 43.478 0.00 0.00 0.00 3.11
5053 5405 3.260205 TCTTCAGATCTTTGGGGTCCTT 58.740 45.455 0.00 0.00 0.00 3.36
5054 5406 2.843113 CTCTTCAGATCTTTGGGGTCCT 59.157 50.000 0.00 0.00 0.00 3.85
5055 5407 2.092699 CCTCTTCAGATCTTTGGGGTCC 60.093 54.545 0.00 0.00 0.00 4.46
5056 5408 2.840651 TCCTCTTCAGATCTTTGGGGTC 59.159 50.000 0.00 0.00 0.00 4.46
5057 5409 2.921221 TCCTCTTCAGATCTTTGGGGT 58.079 47.619 0.00 0.00 0.00 4.95
5058 5410 3.615155 GTTCCTCTTCAGATCTTTGGGG 58.385 50.000 0.00 0.00 0.00 4.96
5059 5411 3.265791 CGTTCCTCTTCAGATCTTTGGG 58.734 50.000 0.00 0.00 0.00 4.12
5060 5412 2.675348 GCGTTCCTCTTCAGATCTTTGG 59.325 50.000 0.00 0.00 0.00 3.28
5061 5413 3.329386 TGCGTTCCTCTTCAGATCTTTG 58.671 45.455 0.00 0.00 0.00 2.77
5062 5414 3.685139 TGCGTTCCTCTTCAGATCTTT 57.315 42.857 0.00 0.00 0.00 2.52
5063 5415 3.685139 TTGCGTTCCTCTTCAGATCTT 57.315 42.857 0.00 0.00 0.00 2.40
5064 5416 3.196469 TGATTGCGTTCCTCTTCAGATCT 59.804 43.478 0.00 0.00 0.00 2.75
5065 5417 3.525537 TGATTGCGTTCCTCTTCAGATC 58.474 45.455 0.00 0.00 0.00 2.75
5066 5418 3.529533 CTGATTGCGTTCCTCTTCAGAT 58.470 45.455 0.00 0.00 34.00 2.90
5067 5419 2.354103 CCTGATTGCGTTCCTCTTCAGA 60.354 50.000 0.00 0.00 34.00 3.27
5068 5420 2.005451 CCTGATTGCGTTCCTCTTCAG 58.995 52.381 0.00 0.00 0.00 3.02
5069 5421 1.347707 ACCTGATTGCGTTCCTCTTCA 59.652 47.619 0.00 0.00 0.00 3.02
5070 5422 2.003301 GACCTGATTGCGTTCCTCTTC 58.997 52.381 0.00 0.00 0.00 2.87
5071 5423 1.339151 GGACCTGATTGCGTTCCTCTT 60.339 52.381 0.00 0.00 0.00 2.85
5072 5424 0.250513 GGACCTGATTGCGTTCCTCT 59.749 55.000 0.00 0.00 0.00 3.69
5073 5425 0.036388 TGGACCTGATTGCGTTCCTC 60.036 55.000 0.00 0.00 0.00 3.71
5074 5426 0.400213 TTGGACCTGATTGCGTTCCT 59.600 50.000 0.00 0.00 0.00 3.36
5075 5427 0.804989 CTTGGACCTGATTGCGTTCC 59.195 55.000 0.00 0.00 0.00 3.62
5076 5428 0.169009 GCTTGGACCTGATTGCGTTC 59.831 55.000 0.00 0.00 0.00 3.95
5077 5429 1.244019 GGCTTGGACCTGATTGCGTT 61.244 55.000 0.00 0.00 0.00 4.84
5078 5430 1.675641 GGCTTGGACCTGATTGCGT 60.676 57.895 0.00 0.00 0.00 5.24
5079 5431 1.675310 TGGCTTGGACCTGATTGCG 60.675 57.895 0.00 0.00 0.00 4.85
5080 5432 0.610232 AGTGGCTTGGACCTGATTGC 60.610 55.000 0.00 0.00 0.00 3.56
5081 5433 1.457346 GAGTGGCTTGGACCTGATTG 58.543 55.000 0.00 0.00 0.00 2.67
5082 5434 0.329596 GGAGTGGCTTGGACCTGATT 59.670 55.000 0.00 0.00 0.00 2.57
5083 5435 1.566298 GGGAGTGGCTTGGACCTGAT 61.566 60.000 0.00 0.00 0.00 2.90
5084 5436 2.224159 GGGAGTGGCTTGGACCTGA 61.224 63.158 0.00 0.00 0.00 3.86
5085 5437 2.352805 GGGAGTGGCTTGGACCTG 59.647 66.667 0.00 0.00 0.00 4.00
5086 5438 3.322466 CGGGAGTGGCTTGGACCT 61.322 66.667 0.00 0.00 0.00 3.85
5087 5439 2.595009 GATCGGGAGTGGCTTGGACC 62.595 65.000 0.00 0.00 0.00 4.46
5088 5440 1.153349 GATCGGGAGTGGCTTGGAC 60.153 63.158 0.00 0.00 0.00 4.02
5089 5441 2.721167 CGATCGGGAGTGGCTTGGA 61.721 63.158 7.38 0.00 0.00 3.53
5090 5442 2.202932 CGATCGGGAGTGGCTTGG 60.203 66.667 7.38 0.00 0.00 3.61
5091 5443 1.519455 GTCGATCGGGAGTGGCTTG 60.519 63.158 16.41 0.00 0.00 4.01
5092 5444 1.668101 GAGTCGATCGGGAGTGGCTT 61.668 60.000 16.41 0.00 0.00 4.35
5093 5445 2.043852 AGTCGATCGGGAGTGGCT 60.044 61.111 16.41 0.00 0.00 4.75
5094 5446 2.413765 GAGTCGATCGGGAGTGGC 59.586 66.667 16.41 0.00 0.00 5.01
5095 5447 1.320344 TTGGAGTCGATCGGGAGTGG 61.320 60.000 16.41 0.00 0.00 4.00
5096 5448 0.530744 TTTGGAGTCGATCGGGAGTG 59.469 55.000 16.41 0.00 0.00 3.51
5097 5449 0.531200 GTTTGGAGTCGATCGGGAGT 59.469 55.000 16.41 0.00 0.00 3.85
5098 5450 0.818296 AGTTTGGAGTCGATCGGGAG 59.182 55.000 16.41 0.00 0.00 4.30
5099 5451 0.815734 GAGTTTGGAGTCGATCGGGA 59.184 55.000 16.41 0.00 0.00 5.14
5100 5452 3.347411 GAGTTTGGAGTCGATCGGG 57.653 57.895 16.41 0.00 0.00 5.14
5107 5459 3.119096 GCCGGCGAGTTTGGAGTC 61.119 66.667 12.58 0.00 0.00 3.36
5108 5460 3.591254 GAGCCGGCGAGTTTGGAGT 62.591 63.158 23.20 0.00 0.00 3.85
5109 5461 2.815647 GAGCCGGCGAGTTTGGAG 60.816 66.667 23.20 0.00 0.00 3.86
5110 5462 4.388499 GGAGCCGGCGAGTTTGGA 62.388 66.667 23.20 0.00 0.00 3.53
5121 5473 4.530857 GTGATGTCCCCGGAGCCG 62.531 72.222 0.73 1.06 39.44 5.52
5122 5474 4.176752 GGTGATGTCCCCGGAGCC 62.177 72.222 0.73 0.00 0.00 4.70
5123 5475 3.399181 TGGTGATGTCCCCGGAGC 61.399 66.667 0.73 0.00 0.00 4.70
5124 5476 1.553690 AAGTGGTGATGTCCCCGGAG 61.554 60.000 0.73 0.00 0.00 4.63
5125 5477 1.537889 AAGTGGTGATGTCCCCGGA 60.538 57.895 0.73 0.00 0.00 5.14
5126 5478 1.377202 CAAGTGGTGATGTCCCCGG 60.377 63.158 0.00 0.00 0.00 5.73
5127 5479 1.377202 CCAAGTGGTGATGTCCCCG 60.377 63.158 0.00 0.00 0.00 5.73
5128 5480 4.743018 CCAAGTGGTGATGTCCCC 57.257 61.111 0.00 0.00 0.00 4.81
5138 5490 0.666577 GAACTCGTCGGACCAAGTGG 60.667 60.000 10.53 0.00 42.17 4.00
5139 5491 0.314302 AGAACTCGTCGGACCAAGTG 59.686 55.000 10.53 0.00 0.00 3.16
5140 5492 1.000496 GAAGAACTCGTCGGACCAAGT 60.000 52.381 1.91 3.90 0.00 3.16
5141 5493 1.000607 TGAAGAACTCGTCGGACCAAG 60.001 52.381 1.91 3.26 0.00 3.61
5142 5494 1.034356 TGAAGAACTCGTCGGACCAA 58.966 50.000 1.91 0.00 0.00 3.67
5143 5495 0.313043 GTGAAGAACTCGTCGGACCA 59.687 55.000 1.91 0.00 0.00 4.02
5144 5496 0.388263 GGTGAAGAACTCGTCGGACC 60.388 60.000 1.91 0.00 0.00 4.46
5145 5497 0.728466 CGGTGAAGAACTCGTCGGAC 60.728 60.000 0.00 0.00 0.00 4.79
5146 5498 1.577922 CGGTGAAGAACTCGTCGGA 59.422 57.895 0.00 0.00 0.00 4.55
5147 5499 2.087009 GCGGTGAAGAACTCGTCGG 61.087 63.158 0.00 0.00 0.00 4.79
5148 5500 1.337817 CTGCGGTGAAGAACTCGTCG 61.338 60.000 0.00 0.00 0.00 5.12
5149 5501 1.618640 GCTGCGGTGAAGAACTCGTC 61.619 60.000 0.00 0.00 0.00 4.20
5150 5502 1.664965 GCTGCGGTGAAGAACTCGT 60.665 57.895 0.00 0.00 0.00 4.18
5151 5503 1.221466 TTGCTGCGGTGAAGAACTCG 61.221 55.000 0.00 0.00 0.00 4.18
5152 5504 0.514691 CTTGCTGCGGTGAAGAACTC 59.485 55.000 0.00 0.00 0.00 3.01
5153 5505 1.510480 GCTTGCTGCGGTGAAGAACT 61.510 55.000 9.84 0.00 0.00 3.01
5154 5506 1.081840 GCTTGCTGCGGTGAAGAAC 60.082 57.895 9.84 0.00 0.00 3.01
5155 5507 2.260869 GGCTTGCTGCGGTGAAGAA 61.261 57.895 9.84 0.00 44.05 2.52
5156 5508 2.669569 GGCTTGCTGCGGTGAAGA 60.670 61.111 9.84 0.00 44.05 2.87
5157 5509 2.338015 ATGGCTTGCTGCGGTGAAG 61.338 57.895 0.00 0.00 44.05 3.02
5158 5510 2.282391 ATGGCTTGCTGCGGTGAA 60.282 55.556 0.00 0.00 44.05 3.18
5159 5511 3.057548 CATGGCTTGCTGCGGTGA 61.058 61.111 0.00 0.00 44.05 4.02
5160 5512 2.628696 TTCATGGCTTGCTGCGGTG 61.629 57.895 0.00 0.00 44.05 4.94
5161 5513 2.282391 TTCATGGCTTGCTGCGGT 60.282 55.556 0.00 0.00 44.05 5.68
5162 5514 1.940883 ATGTTCATGGCTTGCTGCGG 61.941 55.000 0.00 0.00 44.05 5.69
5163 5515 0.524816 GATGTTCATGGCTTGCTGCG 60.525 55.000 0.00 0.00 44.05 5.18
5164 5516 0.524816 CGATGTTCATGGCTTGCTGC 60.525 55.000 0.00 0.00 41.94 5.25
5165 5517 1.089112 TCGATGTTCATGGCTTGCTG 58.911 50.000 0.00 0.00 0.00 4.41
5166 5518 1.945394 GATCGATGTTCATGGCTTGCT 59.055 47.619 0.54 0.00 0.00 3.91
5167 5519 1.945394 AGATCGATGTTCATGGCTTGC 59.055 47.619 0.54 0.00 0.00 4.01
5168 5520 4.625028 TCTAGATCGATGTTCATGGCTTG 58.375 43.478 0.54 0.00 0.00 4.01
5169 5521 4.343526 ACTCTAGATCGATGTTCATGGCTT 59.656 41.667 0.54 0.00 0.00 4.35
5170 5522 3.894427 ACTCTAGATCGATGTTCATGGCT 59.106 43.478 0.54 0.00 0.00 4.75
5171 5523 4.250116 ACTCTAGATCGATGTTCATGGC 57.750 45.455 0.54 0.00 0.00 4.40
5172 5524 5.048434 TGCTACTCTAGATCGATGTTCATGG 60.048 44.000 0.54 0.00 0.00 3.66
5173 5525 5.855925 GTGCTACTCTAGATCGATGTTCATG 59.144 44.000 0.54 0.00 0.00 3.07
5174 5526 5.767665 AGTGCTACTCTAGATCGATGTTCAT 59.232 40.000 0.54 0.00 0.00 2.57
5175 5527 5.008118 CAGTGCTACTCTAGATCGATGTTCA 59.992 44.000 0.54 0.00 0.00 3.18
5176 5528 5.448438 CAGTGCTACTCTAGATCGATGTTC 58.552 45.833 0.54 0.00 0.00 3.18
5177 5529 4.261405 GCAGTGCTACTCTAGATCGATGTT 60.261 45.833 8.18 0.00 0.00 2.71
5178 5530 3.252215 GCAGTGCTACTCTAGATCGATGT 59.748 47.826 8.18 0.00 0.00 3.06
5179 5531 3.365868 GGCAGTGCTACTCTAGATCGATG 60.366 52.174 16.11 0.00 0.00 3.84
5180 5532 2.817258 GGCAGTGCTACTCTAGATCGAT 59.183 50.000 16.11 0.00 0.00 3.59
5181 5533 2.158740 AGGCAGTGCTACTCTAGATCGA 60.159 50.000 16.11 0.00 0.00 3.59
5182 5534 2.225491 GAGGCAGTGCTACTCTAGATCG 59.775 54.545 16.11 0.00 0.00 3.69
5183 5535 2.556622 GGAGGCAGTGCTACTCTAGATC 59.443 54.545 16.11 0.00 0.00 2.75
5184 5536 2.593026 GGAGGCAGTGCTACTCTAGAT 58.407 52.381 16.11 0.00 0.00 1.98
5185 5537 1.410365 GGGAGGCAGTGCTACTCTAGA 60.410 57.143 16.11 0.00 0.00 2.43
5186 5538 1.036707 GGGAGGCAGTGCTACTCTAG 58.963 60.000 16.11 0.00 0.00 2.43
5187 5539 0.335019 TGGGAGGCAGTGCTACTCTA 59.665 55.000 16.11 5.16 0.00 2.43
5188 5540 0.326048 ATGGGAGGCAGTGCTACTCT 60.326 55.000 16.11 2.80 0.00 3.24
5189 5541 1.414158 TATGGGAGGCAGTGCTACTC 58.586 55.000 16.11 13.55 0.00 2.59
5190 5542 2.109229 ATATGGGAGGCAGTGCTACT 57.891 50.000 16.11 4.06 0.00 2.57
5191 5543 2.354203 GCTATATGGGAGGCAGTGCTAC 60.354 54.545 16.11 9.17 0.00 3.58
5192 5544 1.902508 GCTATATGGGAGGCAGTGCTA 59.097 52.381 16.11 0.00 0.00 3.49
5193 5545 0.689623 GCTATATGGGAGGCAGTGCT 59.310 55.000 16.11 0.33 0.00 4.40
5194 5546 0.689623 AGCTATATGGGAGGCAGTGC 59.310 55.000 6.55 6.55 0.00 4.40
5195 5547 2.369860 TGAAGCTATATGGGAGGCAGTG 59.630 50.000 0.00 0.00 0.00 3.66
5196 5548 2.694397 TGAAGCTATATGGGAGGCAGT 58.306 47.619 0.00 0.00 0.00 4.40
5197 5549 3.558746 CCTTGAAGCTATATGGGAGGCAG 60.559 52.174 0.00 0.00 0.00 4.85
5198 5550 2.373169 CCTTGAAGCTATATGGGAGGCA 59.627 50.000 0.00 0.00 0.00 4.75
5199 5551 2.877708 GCCTTGAAGCTATATGGGAGGC 60.878 54.545 0.00 0.00 41.26 4.70
5200 5552 2.641815 AGCCTTGAAGCTATATGGGAGG 59.358 50.000 0.00 0.00 42.70 4.30
5201 5553 4.081198 CCTAGCCTTGAAGCTATATGGGAG 60.081 50.000 0.00 0.00 44.14 4.30
5202 5554 3.840666 CCTAGCCTTGAAGCTATATGGGA 59.159 47.826 0.00 0.00 44.14 4.37
5203 5555 3.840666 TCCTAGCCTTGAAGCTATATGGG 59.159 47.826 0.00 0.00 44.14 4.00
5204 5556 4.081198 CCTCCTAGCCTTGAAGCTATATGG 60.081 50.000 0.00 0.00 44.14 2.74
5205 5557 4.774726 TCCTCCTAGCCTTGAAGCTATATG 59.225 45.833 0.00 0.00 44.14 1.78
5206 5558 5.017093 TCCTCCTAGCCTTGAAGCTATAT 57.983 43.478 0.00 0.00 44.14 0.86
5207 5559 4.471078 TCCTCCTAGCCTTGAAGCTATA 57.529 45.455 0.00 0.00 44.14 1.31
5208 5560 3.336509 TCCTCCTAGCCTTGAAGCTAT 57.663 47.619 0.00 0.00 44.14 2.97
5209 5561 2.848678 TCCTCCTAGCCTTGAAGCTA 57.151 50.000 0.00 0.00 42.70 3.32
5211 5563 1.834263 TCTTCCTCCTAGCCTTGAAGC 59.166 52.381 0.00 0.00 33.99 3.86
5212 5564 2.433970 CCTCTTCCTCCTAGCCTTGAAG 59.566 54.545 0.00 0.00 35.01 3.02
5213 5565 2.225650 ACCTCTTCCTCCTAGCCTTGAA 60.226 50.000 0.00 0.00 0.00 2.69
5214 5566 1.362932 ACCTCTTCCTCCTAGCCTTGA 59.637 52.381 0.00 0.00 0.00 3.02
5215 5567 1.872773 ACCTCTTCCTCCTAGCCTTG 58.127 55.000 0.00 0.00 0.00 3.61
5216 5568 2.573915 CAAACCTCTTCCTCCTAGCCTT 59.426 50.000 0.00 0.00 0.00 4.35
5217 5569 2.192263 CAAACCTCTTCCTCCTAGCCT 58.808 52.381 0.00 0.00 0.00 4.58
5218 5570 1.210722 CCAAACCTCTTCCTCCTAGCC 59.789 57.143 0.00 0.00 0.00 3.93
5219 5571 1.407575 GCCAAACCTCTTCCTCCTAGC 60.408 57.143 0.00 0.00 0.00 3.42
5220 5572 1.210722 GGCCAAACCTCTTCCTCCTAG 59.789 57.143 0.00 0.00 34.51 3.02
5221 5573 1.286248 GGCCAAACCTCTTCCTCCTA 58.714 55.000 0.00 0.00 34.51 2.94
5222 5574 1.842381 CGGCCAAACCTCTTCCTCCT 61.842 60.000 2.24 0.00 35.61 3.69
5223 5575 1.377333 CGGCCAAACCTCTTCCTCC 60.377 63.158 2.24 0.00 35.61 4.30
5224 5576 2.041115 GCGGCCAAACCTCTTCCTC 61.041 63.158 2.24 0.00 35.61 3.71
5225 5577 2.034221 GCGGCCAAACCTCTTCCT 59.966 61.111 2.24 0.00 35.61 3.36
5226 5578 3.062466 GGCGGCCAAACCTCTTCC 61.062 66.667 15.62 0.00 35.61 3.46
5227 5579 3.062466 GGGCGGCCAAACCTCTTC 61.062 66.667 25.33 0.00 35.61 2.87
5228 5580 3.146828 AAGGGCGGCCAAACCTCTT 62.147 57.895 31.59 10.91 35.61 2.85
5229 5581 3.569200 GAAGGGCGGCCAAACCTCT 62.569 63.158 31.59 3.91 35.61 3.69
5230 5582 3.062466 GAAGGGCGGCCAAACCTC 61.062 66.667 31.59 13.87 35.61 3.85
5244 5596 1.227380 CCGAATCCTCTGGCCGAAG 60.227 63.158 0.00 0.00 0.00 3.79
5245 5597 1.987855 ACCGAATCCTCTGGCCGAA 60.988 57.895 0.00 0.00 0.00 4.30
5246 5598 2.363795 ACCGAATCCTCTGGCCGA 60.364 61.111 0.00 0.00 0.00 5.54
5247 5599 2.202932 CACCGAATCCTCTGGCCG 60.203 66.667 0.00 0.00 0.00 6.13
5248 5600 2.190578 CCACCGAATCCTCTGGCC 59.809 66.667 0.00 0.00 0.00 5.36
5249 5601 2.514824 GCCACCGAATCCTCTGGC 60.515 66.667 0.00 0.00 42.41 4.85
5250 5602 2.202932 CGCCACCGAATCCTCTGG 60.203 66.667 0.00 0.00 36.29 3.86
5251 5603 2.892425 GCGCCACCGAATCCTCTG 60.892 66.667 0.00 0.00 36.29 3.35
5252 5604 4.514577 CGCGCCACCGAATCCTCT 62.515 66.667 0.00 0.00 36.29 3.69
5299 5651 2.595463 TGCTTGAGCTTTGGCGCT 60.595 55.556 7.64 0.00 44.33 5.92
5300 5652 2.429739 GTGCTTGAGCTTTGGCGC 60.430 61.111 0.00 0.00 44.37 6.53
5301 5653 1.870055 ATGGTGCTTGAGCTTTGGCG 61.870 55.000 4.44 0.00 44.37 5.69
5302 5654 0.108945 GATGGTGCTTGAGCTTTGGC 60.109 55.000 4.44 0.00 42.66 4.52
5303 5655 0.169672 CGATGGTGCTTGAGCTTTGG 59.830 55.000 4.44 0.00 42.66 3.28
5304 5656 1.159285 TCGATGGTGCTTGAGCTTTG 58.841 50.000 4.44 0.00 42.66 2.77
5305 5657 1.741706 CATCGATGGTGCTTGAGCTTT 59.258 47.619 17.96 0.00 42.66 3.51
5306 5658 1.065926 TCATCGATGGTGCTTGAGCTT 60.066 47.619 24.61 0.00 42.66 3.74
5307 5659 0.538584 TCATCGATGGTGCTTGAGCT 59.461 50.000 24.61 0.00 42.66 4.09
5308 5660 1.590932 ATCATCGATGGTGCTTGAGC 58.409 50.000 24.61 0.00 42.50 4.26
5309 5661 3.791122 GCAAATCATCGATGGTGCTTGAG 60.791 47.826 27.71 12.34 33.70 3.02
5310 5662 2.097954 GCAAATCATCGATGGTGCTTGA 59.902 45.455 27.71 12.15 33.70 3.02
5311 5663 2.098607 AGCAAATCATCGATGGTGCTTG 59.901 45.455 30.07 23.74 39.56 4.01
5312 5664 2.357009 GAGCAAATCATCGATGGTGCTT 59.643 45.455 33.06 23.78 41.30 3.91
5313 5665 1.945394 GAGCAAATCATCGATGGTGCT 59.055 47.619 33.12 33.12 42.78 4.40
5314 5666 1.945394 AGAGCAAATCATCGATGGTGC 59.055 47.619 27.73 27.73 35.46 5.01
5315 5667 2.289820 CCAGAGCAAATCATCGATGGTG 59.710 50.000 24.61 19.52 0.00 4.17
5316 5668 2.171237 TCCAGAGCAAATCATCGATGGT 59.829 45.455 24.61 16.18 0.00 3.55
5317 5669 2.842457 TCCAGAGCAAATCATCGATGG 58.158 47.619 24.61 10.07 0.00 3.51
5318 5670 3.003068 GGTTCCAGAGCAAATCATCGATG 59.997 47.826 19.61 19.61 0.00 3.84
5319 5671 3.209410 GGTTCCAGAGCAAATCATCGAT 58.791 45.455 0.00 0.00 0.00 3.59
5320 5672 2.632377 GGTTCCAGAGCAAATCATCGA 58.368 47.619 0.00 0.00 0.00 3.59
5321 5673 1.328680 CGGTTCCAGAGCAAATCATCG 59.671 52.381 0.00 0.00 0.00 3.84
5322 5674 1.672881 CCGGTTCCAGAGCAAATCATC 59.327 52.381 0.00 0.00 0.00 2.92
5323 5675 1.004745 ACCGGTTCCAGAGCAAATCAT 59.995 47.619 0.00 0.00 0.00 2.45
5324 5676 0.400213 ACCGGTTCCAGAGCAAATCA 59.600 50.000 0.00 0.00 0.00 2.57
5325 5677 1.087501 GACCGGTTCCAGAGCAAATC 58.912 55.000 9.42 0.00 0.00 2.17
5326 5678 0.673644 CGACCGGTTCCAGAGCAAAT 60.674 55.000 9.42 0.00 0.00 2.32
5327 5679 1.301401 CGACCGGTTCCAGAGCAAA 60.301 57.895 9.42 0.00 0.00 3.68
5328 5680 2.342279 CGACCGGTTCCAGAGCAA 59.658 61.111 9.42 0.00 0.00 3.91
5329 5681 4.373116 GCGACCGGTTCCAGAGCA 62.373 66.667 9.42 0.00 0.00 4.26
5330 5682 3.876589 TTGCGACCGGTTCCAGAGC 62.877 63.158 9.42 8.78 0.00 4.09
5331 5683 1.738099 CTTGCGACCGGTTCCAGAG 60.738 63.158 9.42 5.99 0.00 3.35
5332 5684 1.750341 TTCTTGCGACCGGTTCCAGA 61.750 55.000 9.42 8.01 0.00 3.86
5333 5685 1.301401 TTCTTGCGACCGGTTCCAG 60.301 57.895 9.42 5.53 0.00 3.86
5334 5686 1.595929 GTTCTTGCGACCGGTTCCA 60.596 57.895 9.42 6.25 0.00 3.53
5335 5687 1.566018 CTGTTCTTGCGACCGGTTCC 61.566 60.000 9.42 3.07 0.00 3.62
5336 5688 0.878961 ACTGTTCTTGCGACCGGTTC 60.879 55.000 9.42 4.45 0.00 3.62
5337 5689 0.878961 GACTGTTCTTGCGACCGGTT 60.879 55.000 9.42 0.00 0.00 4.44
5338 5690 1.300697 GACTGTTCTTGCGACCGGT 60.301 57.895 6.92 6.92 0.00 5.28
5339 5691 0.600255 AAGACTGTTCTTGCGACCGG 60.600 55.000 0.00 0.00 40.82 5.28
5340 5692 0.784778 GAAGACTGTTCTTGCGACCG 59.215 55.000 0.00 0.00 42.53 4.79
5341 5693 1.865865 TGAAGACTGTTCTTGCGACC 58.134 50.000 0.00 0.00 42.53 4.79
5342 5694 3.368236 GGTATGAAGACTGTTCTTGCGAC 59.632 47.826 0.00 0.00 42.53 5.19
5343 5695 3.006430 TGGTATGAAGACTGTTCTTGCGA 59.994 43.478 0.00 0.00 42.53 5.10
5344 5696 3.325870 TGGTATGAAGACTGTTCTTGCG 58.674 45.455 0.00 0.00 42.53 4.85
5345 5697 4.319177 ACTGGTATGAAGACTGTTCTTGC 58.681 43.478 0.00 0.00 42.53 4.01
5346 5698 4.932200 GGACTGGTATGAAGACTGTTCTTG 59.068 45.833 0.00 0.00 42.53 3.02
5347 5699 4.020128 GGGACTGGTATGAAGACTGTTCTT 60.020 45.833 0.00 0.00 45.35 2.52
5348 5700 3.515901 GGGACTGGTATGAAGACTGTTCT 59.484 47.826 0.00 0.00 0.00 3.01
5349 5701 3.515901 AGGGACTGGTATGAAGACTGTTC 59.484 47.826 0.00 0.00 37.18 3.18
5350 5702 3.521727 AGGGACTGGTATGAAGACTGTT 58.478 45.455 0.00 0.00 37.18 3.16
5351 5703 3.191888 AGGGACTGGTATGAAGACTGT 57.808 47.619 0.00 0.00 37.18 3.55
5372 5724 0.034896 ATGGTGGTGGTCAAGTCGAC 59.965 55.000 7.70 7.70 44.57 4.20
5373 5725 2.447630 ATGGTGGTGGTCAAGTCGA 58.552 52.632 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.