Multiple sequence alignment - TraesCS5B01G116400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G116400 chr5B 100.000 2618 0 0 1 2618 198415806 198418423 0.000000e+00 4835
1 TraesCS5B01G116400 chr4A 100.000 870 0 0 793 1662 607178717 607179586 0.000000e+00 1607
2 TraesCS5B01G116400 chr5D 97.024 941 24 2 1662 2599 193129059 193129998 0.000000e+00 1580
3 TraesCS5B01G116400 chrUn 98.499 866 10 1 796 1661 331324927 331325789 0.000000e+00 1524
4 TraesCS5B01G116400 chrUn 98.382 865 11 1 796 1660 331364759 331365620 0.000000e+00 1517
5 TraesCS5B01G116400 chr7B 98.382 865 11 1 796 1660 725613596 725612735 0.000000e+00 1517
6 TraesCS5B01G116400 chr7B 98.270 867 12 1 796 1662 725648458 725647595 0.000000e+00 1515
7 TraesCS5B01G116400 chr7B 97.126 835 23 1 832 1665 253687543 253688377 0.000000e+00 1408
8 TraesCS5B01G116400 chr7B 97.307 817 21 1 832 1647 23639557 23638741 0.000000e+00 1386
9 TraesCS5B01G116400 chr3B 95.512 869 31 2 797 1665 22525204 22524344 0.000000e+00 1382
10 TraesCS5B01G116400 chr3B 80.415 337 62 4 798 1132 816812630 816812964 1.200000e-63 254
11 TraesCS5B01G116400 chr4D 91.756 655 49 4 1 651 307484264 307484917 0.000000e+00 905
12 TraesCS5B01G116400 chr4D 90.937 651 57 2 1 650 74817167 74817816 0.000000e+00 874
13 TraesCS5B01G116400 chr2D 91.705 651 51 3 1 650 569150245 569150893 0.000000e+00 900
14 TraesCS5B01G116400 chr3D 91.551 651 53 2 1 650 158795362 158796011 0.000000e+00 896
15 TraesCS5B01G116400 chr1D 91.411 652 53 3 1 650 467993471 467992821 0.000000e+00 891
16 TraesCS5B01G116400 chr1D 90.937 651 57 2 1 650 59397169 59397818 0.000000e+00 874
17 TraesCS5B01G116400 chr7D 91.131 654 52 5 1 650 595841257 595840606 0.000000e+00 881
18 TraesCS5B01G116400 chr6D 91.231 650 53 3 2 650 335598745 335599391 0.000000e+00 881
19 TraesCS5B01G116400 chr6D 90.965 653 53 6 1 650 321818838 321818189 0.000000e+00 874
20 TraesCS5B01G116400 chr1A 90.554 614 57 1 979 1591 35544856 35545469 0.000000e+00 811


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G116400 chr5B 198415806 198418423 2617 False 4835 4835 100.000 1 2618 1 chr5B.!!$F1 2617
1 TraesCS5B01G116400 chr4A 607178717 607179586 869 False 1607 1607 100.000 793 1662 1 chr4A.!!$F1 869
2 TraesCS5B01G116400 chr5D 193129059 193129998 939 False 1580 1580 97.024 1662 2599 1 chr5D.!!$F1 937
3 TraesCS5B01G116400 chrUn 331324927 331325789 862 False 1524 1524 98.499 796 1661 1 chrUn.!!$F1 865
4 TraesCS5B01G116400 chrUn 331364759 331365620 861 False 1517 1517 98.382 796 1660 1 chrUn.!!$F2 864
5 TraesCS5B01G116400 chr7B 725612735 725613596 861 True 1517 1517 98.382 796 1660 1 chr7B.!!$R2 864
6 TraesCS5B01G116400 chr7B 725647595 725648458 863 True 1515 1515 98.270 796 1662 1 chr7B.!!$R3 866
7 TraesCS5B01G116400 chr7B 253687543 253688377 834 False 1408 1408 97.126 832 1665 1 chr7B.!!$F1 833
8 TraesCS5B01G116400 chr7B 23638741 23639557 816 True 1386 1386 97.307 832 1647 1 chr7B.!!$R1 815
9 TraesCS5B01G116400 chr3B 22524344 22525204 860 True 1382 1382 95.512 797 1665 1 chr3B.!!$R1 868
10 TraesCS5B01G116400 chr4D 307484264 307484917 653 False 905 905 91.756 1 651 1 chr4D.!!$F2 650
11 TraesCS5B01G116400 chr4D 74817167 74817816 649 False 874 874 90.937 1 650 1 chr4D.!!$F1 649
12 TraesCS5B01G116400 chr2D 569150245 569150893 648 False 900 900 91.705 1 650 1 chr2D.!!$F1 649
13 TraesCS5B01G116400 chr3D 158795362 158796011 649 False 896 896 91.551 1 650 1 chr3D.!!$F1 649
14 TraesCS5B01G116400 chr1D 467992821 467993471 650 True 891 891 91.411 1 650 1 chr1D.!!$R1 649
15 TraesCS5B01G116400 chr1D 59397169 59397818 649 False 874 874 90.937 1 650 1 chr1D.!!$F1 649
16 TraesCS5B01G116400 chr7D 595840606 595841257 651 True 881 881 91.131 1 650 1 chr7D.!!$R1 649
17 TraesCS5B01G116400 chr6D 335598745 335599391 646 False 881 881 91.231 2 650 1 chr6D.!!$F1 648
18 TraesCS5B01G116400 chr6D 321818189 321818838 649 True 874 874 90.965 1 650 1 chr6D.!!$R1 649
19 TraesCS5B01G116400 chr1A 35544856 35545469 613 False 811 811 90.554 979 1591 1 chr1A.!!$F1 612

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
538 540 0.03601 CCATCCACGCAAAGGAGAGT 60.036 55.0 0.0 0.0 38.83 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1770 1801 0.040425 GTTGTTGTGATCGTGGGCAC 60.04 55.0 0.0 0.0 35.63 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 78 3.425094 CGCCGAATACGAAAATTTGACCA 60.425 43.478 0.00 0.00 42.66 4.02
82 84 2.514803 ACGAAAATTTGACCAGGGAGG 58.485 47.619 0.00 0.00 45.67 4.30
200 202 0.958822 GGTGTCAAAACCGGCTGATT 59.041 50.000 0.00 0.00 0.00 2.57
207 209 0.325602 AAACCGGCTGATTTCGGGTA 59.674 50.000 0.00 0.00 46.82 3.69
208 210 0.107848 AACCGGCTGATTTCGGGTAG 60.108 55.000 0.00 0.00 45.54 3.18
209 211 1.227556 CCGGCTGATTTCGGGTAGG 60.228 63.158 0.00 0.00 42.32 3.18
210 212 1.227556 CGGCTGATTTCGGGTAGGG 60.228 63.158 0.00 0.00 0.00 3.53
211 213 1.148498 GGCTGATTTCGGGTAGGGG 59.852 63.158 0.00 0.00 0.00 4.79
212 214 1.148498 GCTGATTTCGGGTAGGGGG 59.852 63.158 0.00 0.00 0.00 5.40
227 229 4.265056 GGGGTCCCAACTGTGCGT 62.265 66.667 10.98 0.00 35.81 5.24
228 230 2.668550 GGGTCCCAACTGTGCGTC 60.669 66.667 1.78 0.00 0.00 5.19
229 231 2.426023 GGTCCCAACTGTGCGTCT 59.574 61.111 0.00 0.00 0.00 4.18
230 232 1.961277 GGTCCCAACTGTGCGTCTG 60.961 63.158 0.00 0.00 0.00 3.51
231 233 1.961277 GTCCCAACTGTGCGTCTGG 60.961 63.158 0.00 0.00 0.00 3.86
232 234 2.669569 CCCAACTGTGCGTCTGGG 60.670 66.667 0.32 0.32 37.50 4.45
233 235 2.669569 CCAACTGTGCGTCTGGGG 60.670 66.667 0.00 0.00 0.00 4.96
234 236 2.425592 CAACTGTGCGTCTGGGGA 59.574 61.111 0.00 0.00 0.00 4.81
235 237 1.003355 CAACTGTGCGTCTGGGGAT 60.003 57.895 0.00 0.00 0.00 3.85
236 238 1.021390 CAACTGTGCGTCTGGGGATC 61.021 60.000 0.00 0.00 0.00 3.36
237 239 2.202797 CTGTGCGTCTGGGGATCG 60.203 66.667 0.00 0.00 0.00 3.69
238 240 2.678580 TGTGCGTCTGGGGATCGA 60.679 61.111 0.00 0.00 0.00 3.59
239 241 2.225791 CTGTGCGTCTGGGGATCGAA 62.226 60.000 0.00 0.00 0.00 3.71
240 242 1.519455 GTGCGTCTGGGGATCGAAG 60.519 63.158 0.00 0.00 0.00 3.79
241 243 2.107141 GCGTCTGGGGATCGAAGG 59.893 66.667 0.00 0.00 0.00 3.46
242 244 2.722201 GCGTCTGGGGATCGAAGGT 61.722 63.158 0.00 0.00 0.00 3.50
243 245 1.389609 GCGTCTGGGGATCGAAGGTA 61.390 60.000 0.00 0.00 0.00 3.08
244 246 1.108776 CGTCTGGGGATCGAAGGTAA 58.891 55.000 0.00 0.00 0.00 2.85
245 247 1.202382 CGTCTGGGGATCGAAGGTAAC 60.202 57.143 0.00 0.00 0.00 2.50
246 248 1.829222 GTCTGGGGATCGAAGGTAACA 59.171 52.381 0.00 0.00 41.41 2.41
247 249 2.108168 TCTGGGGATCGAAGGTAACAG 58.892 52.381 0.00 0.00 41.41 3.16
248 250 1.139058 CTGGGGATCGAAGGTAACAGG 59.861 57.143 0.00 0.00 41.41 4.00
249 251 1.273381 TGGGGATCGAAGGTAACAGGA 60.273 52.381 0.00 0.00 41.41 3.86
250 252 1.413077 GGGGATCGAAGGTAACAGGAG 59.587 57.143 0.00 0.00 41.41 3.69
251 253 2.385803 GGGATCGAAGGTAACAGGAGA 58.614 52.381 0.00 0.00 41.41 3.71
252 254 2.101082 GGGATCGAAGGTAACAGGAGAC 59.899 54.545 0.00 0.00 41.41 3.36
253 255 2.758979 GGATCGAAGGTAACAGGAGACA 59.241 50.000 0.00 0.00 41.41 3.41
254 256 3.194968 GGATCGAAGGTAACAGGAGACAA 59.805 47.826 0.00 0.00 41.41 3.18
255 257 3.936372 TCGAAGGTAACAGGAGACAAG 57.064 47.619 0.00 0.00 41.41 3.16
256 258 2.561419 TCGAAGGTAACAGGAGACAAGG 59.439 50.000 0.00 0.00 41.41 3.61
257 259 2.353803 CGAAGGTAACAGGAGACAAGGG 60.354 54.545 0.00 0.00 41.41 3.95
258 260 2.715763 AGGTAACAGGAGACAAGGGA 57.284 50.000 0.00 0.00 41.41 4.20
259 261 2.258109 AGGTAACAGGAGACAAGGGAC 58.742 52.381 0.00 0.00 41.41 4.46
260 262 1.975680 GGTAACAGGAGACAAGGGACA 59.024 52.381 0.00 0.00 0.00 4.02
261 263 2.289506 GGTAACAGGAGACAAGGGACAC 60.290 54.545 0.00 0.00 0.00 3.67
262 264 0.393077 AACAGGAGACAAGGGACACG 59.607 55.000 0.00 0.00 0.00 4.49
263 265 0.469331 ACAGGAGACAAGGGACACGA 60.469 55.000 0.00 0.00 0.00 4.35
264 266 0.898320 CAGGAGACAAGGGACACGAT 59.102 55.000 0.00 0.00 0.00 3.73
265 267 0.898320 AGGAGACAAGGGACACGATG 59.102 55.000 0.00 0.00 0.00 3.84
266 268 0.108138 GGAGACAAGGGACACGATGG 60.108 60.000 0.00 0.00 0.00 3.51
267 269 0.608640 GAGACAAGGGACACGATGGT 59.391 55.000 0.00 0.00 0.00 3.55
268 270 1.002087 GAGACAAGGGACACGATGGTT 59.998 52.381 0.00 0.00 0.00 3.67
269 271 2.232941 GAGACAAGGGACACGATGGTTA 59.767 50.000 0.00 0.00 0.00 2.85
270 272 2.028385 AGACAAGGGACACGATGGTTAC 60.028 50.000 0.00 0.00 0.00 2.50
271 273 1.002773 ACAAGGGACACGATGGTTACC 59.997 52.381 0.00 0.00 0.00 2.85
272 274 0.616891 AAGGGACACGATGGTTACCC 59.383 55.000 9.98 9.98 38.49 3.69
274 276 0.107848 GGGACACGATGGTTACCCAG 60.108 60.000 12.22 0.00 46.15 4.45
275 277 0.107848 GGACACGATGGTTACCCAGG 60.108 60.000 0.00 0.00 46.15 4.45
276 278 0.611714 GACACGATGGTTACCCAGGT 59.388 55.000 0.00 0.00 46.15 4.00
277 279 1.002773 GACACGATGGTTACCCAGGTT 59.997 52.381 0.00 0.00 46.15 3.50
278 280 1.002773 ACACGATGGTTACCCAGGTTC 59.997 52.381 0.00 0.00 46.15 3.62
279 281 0.248289 ACGATGGTTACCCAGGTTCG 59.752 55.000 0.00 6.36 46.15 3.95
280 282 0.461339 CGATGGTTACCCAGGTTCGG 60.461 60.000 0.00 0.00 46.15 4.30
281 283 0.906775 GATGGTTACCCAGGTTCGGA 59.093 55.000 0.00 0.00 46.15 4.55
282 284 0.616891 ATGGTTACCCAGGTTCGGAC 59.383 55.000 0.00 0.00 46.15 4.79
283 285 1.297689 GGTTACCCAGGTTCGGACC 59.702 63.158 4.03 4.03 46.92 4.46
293 295 2.327200 GGTTCGGACCCTCTTAATGG 57.673 55.000 0.00 0.00 40.25 3.16
294 296 1.835531 GGTTCGGACCCTCTTAATGGA 59.164 52.381 0.00 0.00 40.25 3.41
295 297 2.158943 GGTTCGGACCCTCTTAATGGAG 60.159 54.545 0.00 0.00 40.25 3.86
296 298 2.764572 GTTCGGACCCTCTTAATGGAGA 59.235 50.000 0.00 0.00 35.52 3.71
297 299 3.330126 TCGGACCCTCTTAATGGAGAT 57.670 47.619 0.00 0.00 35.52 2.75
298 300 4.464652 TCGGACCCTCTTAATGGAGATA 57.535 45.455 0.00 0.00 35.52 1.98
299 301 4.811498 TCGGACCCTCTTAATGGAGATAA 58.189 43.478 0.00 0.00 35.52 1.75
300 302 4.587684 TCGGACCCTCTTAATGGAGATAAC 59.412 45.833 0.00 0.00 35.52 1.89
301 303 4.344102 CGGACCCTCTTAATGGAGATAACA 59.656 45.833 0.00 0.00 35.52 2.41
302 304 5.612351 GGACCCTCTTAATGGAGATAACAC 58.388 45.833 0.00 0.00 35.52 3.32
303 305 5.454897 GGACCCTCTTAATGGAGATAACACC 60.455 48.000 0.00 0.00 35.52 4.16
304 306 4.412528 ACCCTCTTAATGGAGATAACACCC 59.587 45.833 0.00 0.00 35.52 4.61
305 307 4.660771 CCCTCTTAATGGAGATAACACCCT 59.339 45.833 0.00 0.00 35.52 4.34
306 308 5.844516 CCCTCTTAATGGAGATAACACCCTA 59.155 44.000 0.00 0.00 35.52 3.53
307 309 6.239629 CCCTCTTAATGGAGATAACACCCTAC 60.240 46.154 0.00 0.00 35.52 3.18
308 310 6.555360 CCTCTTAATGGAGATAACACCCTACT 59.445 42.308 0.00 0.00 35.52 2.57
309 311 7.071321 CCTCTTAATGGAGATAACACCCTACTT 59.929 40.741 0.00 0.00 35.52 2.24
310 312 8.019656 TCTTAATGGAGATAACACCCTACTTC 57.980 38.462 0.00 0.00 0.00 3.01
311 313 7.844779 TCTTAATGGAGATAACACCCTACTTCT 59.155 37.037 0.00 0.00 0.00 2.85
312 314 6.893020 AATGGAGATAACACCCTACTTCTT 57.107 37.500 0.00 0.00 0.00 2.52
313 315 5.677319 TGGAGATAACACCCTACTTCTTG 57.323 43.478 0.00 0.00 0.00 3.02
314 316 4.081087 TGGAGATAACACCCTACTTCTTGC 60.081 45.833 0.00 0.00 0.00 4.01
315 317 4.162509 GGAGATAACACCCTACTTCTTGCT 59.837 45.833 0.00 0.00 0.00 3.91
316 318 5.338463 GGAGATAACACCCTACTTCTTGCTT 60.338 44.000 0.00 0.00 0.00 3.91
317 319 5.491982 AGATAACACCCTACTTCTTGCTTG 58.508 41.667 0.00 0.00 0.00 4.01
318 320 3.857157 AACACCCTACTTCTTGCTTGA 57.143 42.857 0.00 0.00 0.00 3.02
319 321 4.373156 AACACCCTACTTCTTGCTTGAT 57.627 40.909 0.00 0.00 0.00 2.57
320 322 4.373156 ACACCCTACTTCTTGCTTGATT 57.627 40.909 0.00 0.00 0.00 2.57
321 323 4.074970 ACACCCTACTTCTTGCTTGATTG 58.925 43.478 0.00 0.00 0.00 2.67
322 324 4.202461 ACACCCTACTTCTTGCTTGATTGA 60.202 41.667 0.00 0.00 0.00 2.57
323 325 4.154918 CACCCTACTTCTTGCTTGATTGAC 59.845 45.833 0.00 0.00 0.00 3.18
324 326 4.042187 ACCCTACTTCTTGCTTGATTGACT 59.958 41.667 0.00 0.00 0.00 3.41
325 327 5.006386 CCCTACTTCTTGCTTGATTGACTT 58.994 41.667 0.00 0.00 0.00 3.01
326 328 5.474876 CCCTACTTCTTGCTTGATTGACTTT 59.525 40.000 0.00 0.00 0.00 2.66
327 329 6.376978 CCTACTTCTTGCTTGATTGACTTTG 58.623 40.000 0.00 0.00 0.00 2.77
328 330 6.205464 CCTACTTCTTGCTTGATTGACTTTGA 59.795 38.462 0.00 0.00 0.00 2.69
329 331 6.645790 ACTTCTTGCTTGATTGACTTTGAT 57.354 33.333 0.00 0.00 0.00 2.57
330 332 6.444633 ACTTCTTGCTTGATTGACTTTGATG 58.555 36.000 0.00 0.00 0.00 3.07
331 333 6.263842 ACTTCTTGCTTGATTGACTTTGATGA 59.736 34.615 0.00 0.00 0.00 2.92
332 334 6.250344 TCTTGCTTGATTGACTTTGATGAG 57.750 37.500 0.00 0.00 0.00 2.90
333 335 5.766670 TCTTGCTTGATTGACTTTGATGAGT 59.233 36.000 0.00 0.00 0.00 3.41
334 336 6.936335 TCTTGCTTGATTGACTTTGATGAGTA 59.064 34.615 0.00 0.00 0.00 2.59
335 337 7.609146 TCTTGCTTGATTGACTTTGATGAGTAT 59.391 33.333 0.00 0.00 0.00 2.12
336 338 8.791327 TTGCTTGATTGACTTTGATGAGTATA 57.209 30.769 0.00 0.00 0.00 1.47
337 339 8.429493 TGCTTGATTGACTTTGATGAGTATAG 57.571 34.615 0.00 0.00 0.00 1.31
338 340 7.496920 TGCTTGATTGACTTTGATGAGTATAGG 59.503 37.037 0.00 0.00 0.00 2.57
339 341 7.041508 GCTTGATTGACTTTGATGAGTATAGGG 60.042 40.741 0.00 0.00 0.00 3.53
340 342 6.830912 TGATTGACTTTGATGAGTATAGGGG 58.169 40.000 0.00 0.00 0.00 4.79
341 343 6.386927 TGATTGACTTTGATGAGTATAGGGGT 59.613 38.462 0.00 0.00 0.00 4.95
342 344 6.636454 TTGACTTTGATGAGTATAGGGGTT 57.364 37.500 0.00 0.00 0.00 4.11
343 345 7.743116 TTGACTTTGATGAGTATAGGGGTTA 57.257 36.000 0.00 0.00 0.00 2.85
344 346 7.120923 TGACTTTGATGAGTATAGGGGTTAC 57.879 40.000 0.00 0.00 0.00 2.50
345 347 6.670464 TGACTTTGATGAGTATAGGGGTTACA 59.330 38.462 0.00 0.00 0.00 2.41
346 348 7.181305 TGACTTTGATGAGTATAGGGGTTACAA 59.819 37.037 0.00 0.00 0.00 2.41
347 349 7.565680 ACTTTGATGAGTATAGGGGTTACAAG 58.434 38.462 0.00 0.00 0.00 3.16
348 350 7.402071 ACTTTGATGAGTATAGGGGTTACAAGA 59.598 37.037 0.00 0.00 0.00 3.02
349 351 6.978674 TGATGAGTATAGGGGTTACAAGAG 57.021 41.667 0.00 0.00 0.00 2.85
350 352 6.441222 TGATGAGTATAGGGGTTACAAGAGT 58.559 40.000 0.00 0.00 0.00 3.24
351 353 6.901300 TGATGAGTATAGGGGTTACAAGAGTT 59.099 38.462 0.00 0.00 0.00 3.01
352 354 6.540438 TGAGTATAGGGGTTACAAGAGTTG 57.460 41.667 0.00 0.00 0.00 3.16
353 355 6.258354 TGAGTATAGGGGTTACAAGAGTTGA 58.742 40.000 0.00 0.00 0.00 3.18
354 356 6.901300 TGAGTATAGGGGTTACAAGAGTTGAT 59.099 38.462 0.00 0.00 0.00 2.57
355 357 7.069578 TGAGTATAGGGGTTACAAGAGTTGATC 59.930 40.741 0.00 0.00 0.00 2.92
356 358 7.133483 AGTATAGGGGTTACAAGAGTTGATCT 58.867 38.462 0.00 0.00 41.27 2.75
357 359 8.287350 AGTATAGGGGTTACAAGAGTTGATCTA 58.713 37.037 0.00 0.00 37.23 1.98
358 360 5.678955 AGGGGTTACAAGAGTTGATCTAC 57.321 43.478 0.00 0.00 37.23 2.59
359 361 4.470304 AGGGGTTACAAGAGTTGATCTACC 59.530 45.833 3.54 0.00 37.23 3.18
360 362 4.470304 GGGGTTACAAGAGTTGATCTACCT 59.530 45.833 3.54 0.00 37.23 3.08
361 363 5.045797 GGGGTTACAAGAGTTGATCTACCTT 60.046 44.000 3.54 4.78 37.23 3.50
362 364 5.875359 GGGTTACAAGAGTTGATCTACCTTG 59.125 44.000 23.37 23.37 37.23 3.61
363 365 6.295688 GGGTTACAAGAGTTGATCTACCTTGA 60.296 42.308 27.70 16.96 37.23 3.02
364 366 6.814146 GGTTACAAGAGTTGATCTACCTTGAG 59.186 42.308 27.70 14.25 37.23 3.02
365 367 7.309867 GGTTACAAGAGTTGATCTACCTTGAGA 60.310 40.741 27.70 18.79 37.23 3.27
366 368 6.865834 ACAAGAGTTGATCTACCTTGAGAT 57.134 37.500 27.70 14.24 37.23 2.75
381 383 9.646427 CTACCTTGAGATCATAATAGCTAAACC 57.354 37.037 0.00 0.00 0.00 3.27
382 384 7.454225 ACCTTGAGATCATAATAGCTAAACCC 58.546 38.462 0.00 0.00 0.00 4.11
383 385 7.293535 ACCTTGAGATCATAATAGCTAAACCCT 59.706 37.037 0.00 0.00 0.00 4.34
384 386 8.816894 CCTTGAGATCATAATAGCTAAACCCTA 58.183 37.037 0.00 0.00 0.00 3.53
385 387 9.868277 CTTGAGATCATAATAGCTAAACCCTAG 57.132 37.037 0.00 0.00 0.00 3.02
386 388 9.601810 TTGAGATCATAATAGCTAAACCCTAGA 57.398 33.333 0.00 0.00 0.00 2.43
387 389 9.775539 TGAGATCATAATAGCTAAACCCTAGAT 57.224 33.333 0.00 0.00 0.00 1.98
389 391 9.554053 AGATCATAATAGCTAAACCCTAGATGT 57.446 33.333 0.00 0.00 0.00 3.06
390 392 9.810545 GATCATAATAGCTAAACCCTAGATGTC 57.189 37.037 0.00 0.00 0.00 3.06
391 393 8.958060 TCATAATAGCTAAACCCTAGATGTCT 57.042 34.615 0.00 0.00 0.00 3.41
394 396 6.844097 ATAGCTAAACCCTAGATGTCTAGC 57.156 41.667 10.84 8.75 43.47 3.42
395 397 4.547671 AGCTAAACCCTAGATGTCTAGCA 58.452 43.478 15.63 0.00 43.47 3.49
396 398 5.151454 AGCTAAACCCTAGATGTCTAGCAT 58.849 41.667 15.63 0.06 43.47 3.79
397 399 6.315714 AGCTAAACCCTAGATGTCTAGCATA 58.684 40.000 15.63 2.07 43.47 3.14
398 400 6.957020 AGCTAAACCCTAGATGTCTAGCATAT 59.043 38.462 15.63 0.79 43.47 1.78
399 401 8.116669 AGCTAAACCCTAGATGTCTAGCATATA 58.883 37.037 15.63 1.79 43.47 0.86
400 402 8.919145 GCTAAACCCTAGATGTCTAGCATATAT 58.081 37.037 10.84 0.00 43.47 0.86
402 404 8.901472 AAACCCTAGATGTCTAGCATATATGA 57.099 34.615 17.10 0.00 43.47 2.15
403 405 9.499369 AAACCCTAGATGTCTAGCATATATGAT 57.501 33.333 17.10 12.95 43.47 2.45
404 406 9.499369 AACCCTAGATGTCTAGCATATATGATT 57.501 33.333 17.10 6.19 43.47 2.57
405 407 9.499369 ACCCTAGATGTCTAGCATATATGATTT 57.501 33.333 17.10 3.77 43.47 2.17
406 408 9.761504 CCCTAGATGTCTAGCATATATGATTTG 57.238 37.037 17.10 7.06 43.47 2.32
413 415 9.591792 TGTCTAGCATATATGATTTGTGATAGC 57.408 33.333 17.10 0.00 31.01 2.97
414 416 9.039870 GTCTAGCATATATGATTTGTGATAGCC 57.960 37.037 17.10 0.00 31.01 3.93
415 417 8.985922 TCTAGCATATATGATTTGTGATAGCCT 58.014 33.333 17.10 1.94 31.01 4.58
416 418 9.258826 CTAGCATATATGATTTGTGATAGCCTC 57.741 37.037 17.10 0.00 0.00 4.70
417 419 7.859540 AGCATATATGATTTGTGATAGCCTCT 58.140 34.615 17.10 0.00 0.00 3.69
418 420 8.985922 AGCATATATGATTTGTGATAGCCTCTA 58.014 33.333 17.10 0.00 0.00 2.43
419 421 9.775854 GCATATATGATTTGTGATAGCCTCTAT 57.224 33.333 17.10 0.00 0.00 1.98
422 424 6.692849 ATGATTTGTGATAGCCTCTATGGA 57.307 37.500 0.00 0.00 38.35 3.41
423 425 5.858381 TGATTTGTGATAGCCTCTATGGAC 58.142 41.667 0.00 0.00 38.35 4.02
424 426 5.604231 TGATTTGTGATAGCCTCTATGGACT 59.396 40.000 0.00 0.00 38.35 3.85
425 427 6.782494 TGATTTGTGATAGCCTCTATGGACTA 59.218 38.462 0.00 0.00 38.35 2.59
426 428 7.290014 TGATTTGTGATAGCCTCTATGGACTAA 59.710 37.037 0.00 0.00 38.35 2.24
427 429 7.432148 TTTGTGATAGCCTCTATGGACTAAA 57.568 36.000 0.00 0.00 38.35 1.85
428 430 6.406692 TGTGATAGCCTCTATGGACTAAAC 57.593 41.667 0.00 0.00 38.35 2.01
429 431 5.304614 TGTGATAGCCTCTATGGACTAAACC 59.695 44.000 0.00 0.00 38.35 3.27
430 432 4.838986 TGATAGCCTCTATGGACTAAACCC 59.161 45.833 0.00 0.00 38.35 4.11
431 433 3.423058 AGCCTCTATGGACTAAACCCT 57.577 47.619 0.00 0.00 38.35 4.34
432 434 3.310193 AGCCTCTATGGACTAAACCCTC 58.690 50.000 0.00 0.00 38.35 4.30
433 435 2.369203 GCCTCTATGGACTAAACCCTCC 59.631 54.545 0.00 0.00 38.35 4.30
434 436 3.654273 CCTCTATGGACTAAACCCTCCA 58.346 50.000 0.00 0.00 40.92 3.86
435 437 3.643792 CCTCTATGGACTAAACCCTCCAG 59.356 52.174 0.00 0.00 39.99 3.86
436 438 4.290942 CTCTATGGACTAAACCCTCCAGT 58.709 47.826 0.00 0.00 39.99 4.00
437 439 4.695606 TCTATGGACTAAACCCTCCAGTT 58.304 43.478 0.00 0.00 39.99 3.16
438 440 5.098663 TCTATGGACTAAACCCTCCAGTTT 58.901 41.667 0.00 0.00 39.99 2.66
439 441 6.266080 TCTATGGACTAAACCCTCCAGTTTA 58.734 40.000 0.00 0.00 39.99 2.01
440 442 6.906901 TCTATGGACTAAACCCTCCAGTTTAT 59.093 38.462 0.00 0.00 40.46 1.40
441 443 8.069356 TCTATGGACTAAACCCTCCAGTTTATA 58.931 37.037 0.00 0.00 40.46 0.98
442 444 7.707467 ATGGACTAAACCCTCCAGTTTATAT 57.293 36.000 0.00 0.00 40.46 0.86
443 445 8.808240 ATGGACTAAACCCTCCAGTTTATATA 57.192 34.615 0.00 0.00 40.46 0.86
444 446 8.258850 TGGACTAAACCCTCCAGTTTATATAG 57.741 38.462 0.00 0.00 40.46 1.31
445 447 8.069356 TGGACTAAACCCTCCAGTTTATATAGA 58.931 37.037 0.00 0.00 40.46 1.98
446 448 8.366401 GGACTAAACCCTCCAGTTTATATAGAC 58.634 40.741 0.00 0.00 40.46 2.59
447 449 8.849543 ACTAAACCCTCCAGTTTATATAGACA 57.150 34.615 6.22 0.00 40.46 3.41
448 450 8.702819 ACTAAACCCTCCAGTTTATATAGACAC 58.297 37.037 6.22 0.00 40.46 3.67
449 451 6.496144 AACCCTCCAGTTTATATAGACACC 57.504 41.667 6.22 0.00 0.00 4.16
450 452 4.587684 ACCCTCCAGTTTATATAGACACCG 59.412 45.833 6.22 0.00 0.00 4.94
451 453 4.021368 CCCTCCAGTTTATATAGACACCGG 60.021 50.000 0.00 0.00 0.00 5.28
452 454 4.831155 CCTCCAGTTTATATAGACACCGGA 59.169 45.833 9.46 7.37 0.00 5.14
453 455 5.047943 CCTCCAGTTTATATAGACACCGGAG 60.048 48.000 9.46 19.42 36.81 4.63
466 468 3.221222 CGGAGGAGCCTAGGGTTG 58.779 66.667 16.14 0.00 0.00 3.77
467 469 1.686110 CGGAGGAGCCTAGGGTTGT 60.686 63.158 16.14 5.24 0.00 3.32
468 470 0.396695 CGGAGGAGCCTAGGGTTGTA 60.397 60.000 16.14 0.00 0.00 2.41
469 471 1.121378 GGAGGAGCCTAGGGTTGTAC 58.879 60.000 16.14 2.23 0.00 2.90
470 472 1.621622 GGAGGAGCCTAGGGTTGTACA 60.622 57.143 16.14 0.00 0.00 2.90
471 473 2.185387 GAGGAGCCTAGGGTTGTACAA 58.815 52.381 16.14 3.59 0.00 2.41
472 474 2.570302 GAGGAGCCTAGGGTTGTACAAA 59.430 50.000 16.14 0.00 0.00 2.83
473 475 2.572104 AGGAGCCTAGGGTTGTACAAAG 59.428 50.000 16.14 3.90 0.00 2.77
474 476 2.305052 GGAGCCTAGGGTTGTACAAAGT 59.695 50.000 16.14 0.30 0.00 2.66
475 477 3.597255 GAGCCTAGGGTTGTACAAAGTC 58.403 50.000 16.14 3.22 0.00 3.01
476 478 2.028385 AGCCTAGGGTTGTACAAAGTCG 60.028 50.000 10.51 0.00 0.00 4.18
477 479 2.933928 GCCTAGGGTTGTACAAAGTCGG 60.934 54.545 10.51 8.59 0.00 4.79
478 480 2.301009 CCTAGGGTTGTACAAAGTCGGT 59.699 50.000 10.51 0.00 0.00 4.69
479 481 3.244318 CCTAGGGTTGTACAAAGTCGGTT 60.244 47.826 10.51 0.00 0.00 4.44
480 482 3.286329 AGGGTTGTACAAAGTCGGTTT 57.714 42.857 10.51 0.00 0.00 3.27
481 483 4.420522 AGGGTTGTACAAAGTCGGTTTA 57.579 40.909 10.51 0.00 0.00 2.01
482 484 4.129380 AGGGTTGTACAAAGTCGGTTTAC 58.871 43.478 10.51 0.00 0.00 2.01
483 485 3.876320 GGGTTGTACAAAGTCGGTTTACA 59.124 43.478 10.51 0.00 0.00 2.41
484 486 4.024641 GGGTTGTACAAAGTCGGTTTACAG 60.025 45.833 10.51 0.00 0.00 2.74
485 487 4.810491 GGTTGTACAAAGTCGGTTTACAGA 59.190 41.667 10.51 0.00 0.00 3.41
486 488 5.050567 GGTTGTACAAAGTCGGTTTACAGAG 60.051 44.000 10.51 0.00 0.00 3.35
487 489 5.518848 TGTACAAAGTCGGTTTACAGAGA 57.481 39.130 0.00 0.00 0.00 3.10
488 490 5.904941 TGTACAAAGTCGGTTTACAGAGAA 58.095 37.500 0.00 0.00 0.00 2.87
489 491 6.339730 TGTACAAAGTCGGTTTACAGAGAAA 58.660 36.000 0.00 0.00 0.00 2.52
490 492 6.817641 TGTACAAAGTCGGTTTACAGAGAAAA 59.182 34.615 0.00 0.00 0.00 2.29
491 493 6.937436 ACAAAGTCGGTTTACAGAGAAAAT 57.063 33.333 0.00 0.00 0.00 1.82
492 494 8.981647 GTACAAAGTCGGTTTACAGAGAAAATA 58.018 33.333 0.00 0.00 0.00 1.40
493 495 8.441312 ACAAAGTCGGTTTACAGAGAAAATAA 57.559 30.769 0.00 0.00 0.00 1.40
494 496 8.895737 ACAAAGTCGGTTTACAGAGAAAATAAA 58.104 29.630 0.00 0.00 0.00 1.40
495 497 9.893305 CAAAGTCGGTTTACAGAGAAAATAAAT 57.107 29.630 0.00 0.00 0.00 1.40
501 503 9.257865 CGGTTTACAGAGAAAATAAATTACACG 57.742 33.333 0.00 0.00 0.00 4.49
505 507 7.057149 ACAGAGAAAATAAATTACACGTCCG 57.943 36.000 0.00 0.00 0.00 4.79
506 508 6.091713 ACAGAGAAAATAAATTACACGTCCGG 59.908 38.462 0.00 0.00 0.00 5.14
507 509 6.091713 CAGAGAAAATAAATTACACGTCCGGT 59.908 38.462 0.00 0.00 0.00 5.28
508 510 6.312180 AGAGAAAATAAATTACACGTCCGGTC 59.688 38.462 0.00 0.00 0.00 4.79
509 511 4.845621 AAATAAATTACACGTCCGGTCG 57.154 40.909 19.57 19.57 0.00 4.79
510 512 1.627879 TAAATTACACGTCCGGTCGC 58.372 50.000 21.02 2.20 0.00 5.19
511 513 1.015607 AAATTACACGTCCGGTCGCC 61.016 55.000 21.02 0.00 0.00 5.54
512 514 2.157305 AATTACACGTCCGGTCGCCA 62.157 55.000 21.02 3.44 0.00 5.69
513 515 2.157305 ATTACACGTCCGGTCGCCAA 62.157 55.000 21.02 12.24 0.00 4.52
514 516 2.752322 TTACACGTCCGGTCGCCAAG 62.752 60.000 21.02 10.84 0.00 3.61
518 520 3.423154 GTCCGGTCGCCAAGCTTG 61.423 66.667 19.93 19.93 0.00 4.01
522 524 3.064324 GGTCGCCAAGCTTGCCAT 61.064 61.111 21.43 0.00 0.00 4.40
523 525 2.486966 GTCGCCAAGCTTGCCATC 59.513 61.111 21.43 8.32 0.00 3.51
524 526 2.751436 TCGCCAAGCTTGCCATCC 60.751 61.111 21.43 5.26 0.00 3.51
525 527 3.063704 CGCCAAGCTTGCCATCCA 61.064 61.111 21.43 0.00 0.00 3.41
526 528 2.575461 GCCAAGCTTGCCATCCAC 59.425 61.111 21.43 0.12 0.00 4.02
527 529 2.879907 CCAAGCTTGCCATCCACG 59.120 61.111 21.43 0.62 0.00 4.94
528 530 2.180017 CAAGCTTGCCATCCACGC 59.820 61.111 14.65 0.00 38.87 5.34
529 531 2.282391 AAGCTTGCCATCCACGCA 60.282 55.556 0.00 0.00 40.87 5.24
530 532 1.902918 AAGCTTGCCATCCACGCAA 60.903 52.632 0.00 0.00 43.71 4.85
531 533 1.462731 AAGCTTGCCATCCACGCAAA 61.463 50.000 0.00 0.00 45.11 3.68
532 534 1.444895 GCTTGCCATCCACGCAAAG 60.445 57.895 0.00 0.00 45.11 2.77
533 535 1.213537 CTTGCCATCCACGCAAAGG 59.786 57.895 0.00 0.00 45.11 3.11
534 536 1.228398 TTGCCATCCACGCAAAGGA 60.228 52.632 0.00 0.00 43.00 3.36
535 537 1.243342 TTGCCATCCACGCAAAGGAG 61.243 55.000 0.00 0.00 43.00 3.69
536 538 1.377202 GCCATCCACGCAAAGGAGA 60.377 57.895 0.00 0.00 38.83 3.71
537 539 1.372087 GCCATCCACGCAAAGGAGAG 61.372 60.000 0.00 0.00 38.83 3.20
538 540 0.036010 CCATCCACGCAAAGGAGAGT 60.036 55.000 0.00 0.00 38.83 3.24
539 541 1.363744 CATCCACGCAAAGGAGAGTC 58.636 55.000 0.00 0.00 38.83 3.36
540 542 0.250513 ATCCACGCAAAGGAGAGTCC 59.749 55.000 0.00 0.00 38.83 3.85
556 558 2.910579 TCCTATCCGGACACAAGGG 58.089 57.895 6.12 2.94 36.69 3.95
557 559 0.337082 TCCTATCCGGACACAAGGGA 59.663 55.000 6.12 5.53 36.69 4.20
558 560 1.200519 CCTATCCGGACACAAGGGAA 58.799 55.000 6.12 0.00 32.71 3.97
559 561 1.139058 CCTATCCGGACACAAGGGAAG 59.861 57.143 6.12 0.00 32.71 3.46
560 562 1.139058 CTATCCGGACACAAGGGAAGG 59.861 57.143 6.12 0.00 32.71 3.46
561 563 2.198304 ATCCGGACACAAGGGAAGGC 62.198 60.000 6.12 0.00 32.71 4.35
562 564 2.359975 CGGACACAAGGGAAGGCC 60.360 66.667 0.00 0.00 0.00 5.19
563 565 2.895424 CGGACACAAGGGAAGGCCT 61.895 63.158 0.00 0.00 0.00 5.19
564 566 1.460699 GGACACAAGGGAAGGCCTT 59.539 57.895 20.65 20.65 0.00 4.35
565 567 0.609406 GGACACAAGGGAAGGCCTTC 60.609 60.000 33.67 33.67 38.80 3.46
566 568 0.402121 GACACAAGGGAAGGCCTTCT 59.598 55.000 37.72 21.60 39.45 2.85
567 569 1.628846 GACACAAGGGAAGGCCTTCTA 59.371 52.381 37.72 0.00 39.45 2.10
568 570 2.239907 GACACAAGGGAAGGCCTTCTAT 59.760 50.000 37.72 26.13 39.45 1.98
569 571 2.239907 ACACAAGGGAAGGCCTTCTATC 59.760 50.000 37.72 27.56 39.45 2.08
570 572 2.507471 CACAAGGGAAGGCCTTCTATCT 59.493 50.000 37.72 28.97 39.45 1.98
571 573 3.054065 CACAAGGGAAGGCCTTCTATCTT 60.054 47.826 37.72 31.76 39.45 2.40
572 574 3.054065 ACAAGGGAAGGCCTTCTATCTTG 60.054 47.826 38.34 38.34 41.53 3.02
573 575 2.852130 AGGGAAGGCCTTCTATCTTGT 58.148 47.619 37.72 16.38 39.45 3.16
574 576 4.008916 AGGGAAGGCCTTCTATCTTGTA 57.991 45.455 37.72 0.00 39.45 2.41
575 577 4.571951 AGGGAAGGCCTTCTATCTTGTAT 58.428 43.478 37.72 15.10 39.45 2.29
576 578 4.595350 AGGGAAGGCCTTCTATCTTGTATC 59.405 45.833 37.72 20.55 39.45 2.24
577 579 4.595350 GGGAAGGCCTTCTATCTTGTATCT 59.405 45.833 37.72 4.33 39.45 1.98
578 580 5.072464 GGGAAGGCCTTCTATCTTGTATCTT 59.928 44.000 37.72 3.60 39.45 2.40
579 581 6.227522 GGAAGGCCTTCTATCTTGTATCTTC 58.772 44.000 37.72 17.03 39.45 2.87
580 582 6.183361 GGAAGGCCTTCTATCTTGTATCTTCA 60.183 42.308 37.72 0.00 39.45 3.02
581 583 6.168270 AGGCCTTCTATCTTGTATCTTCAC 57.832 41.667 0.00 0.00 0.00 3.18
582 584 4.985409 GGCCTTCTATCTTGTATCTTCACG 59.015 45.833 0.00 0.00 0.00 4.35
583 585 4.985409 GCCTTCTATCTTGTATCTTCACGG 59.015 45.833 0.00 0.00 0.00 4.94
584 586 4.985409 CCTTCTATCTTGTATCTTCACGGC 59.015 45.833 0.00 0.00 0.00 5.68
585 587 4.585955 TCTATCTTGTATCTTCACGGCC 57.414 45.455 0.00 0.00 0.00 6.13
586 588 2.622064 ATCTTGTATCTTCACGGCCC 57.378 50.000 0.00 0.00 0.00 5.80
587 589 1.271856 TCTTGTATCTTCACGGCCCA 58.728 50.000 0.00 0.00 0.00 5.36
588 590 1.837439 TCTTGTATCTTCACGGCCCAT 59.163 47.619 0.00 0.00 0.00 4.00
589 591 2.158957 TCTTGTATCTTCACGGCCCATC 60.159 50.000 0.00 0.00 0.00 3.51
590 592 1.199615 TGTATCTTCACGGCCCATCA 58.800 50.000 0.00 0.00 0.00 3.07
591 593 1.557371 TGTATCTTCACGGCCCATCAA 59.443 47.619 0.00 0.00 0.00 2.57
592 594 2.172505 TGTATCTTCACGGCCCATCAAT 59.827 45.455 0.00 0.00 0.00 2.57
593 595 1.972872 ATCTTCACGGCCCATCAATC 58.027 50.000 0.00 0.00 0.00 2.67
594 596 0.107214 TCTTCACGGCCCATCAATCC 60.107 55.000 0.00 0.00 0.00 3.01
596 598 2.884997 TTCACGGCCCATCAATCCGG 62.885 60.000 0.00 0.00 46.78 5.14
597 599 4.875713 ACGGCCCATCAATCCGGC 62.876 66.667 0.00 0.00 46.78 6.13
600 602 4.521292 GCCCATCAATCCGGCCCA 62.521 66.667 0.00 0.00 36.63 5.36
601 603 2.522503 CCCATCAATCCGGCCCAT 59.477 61.111 0.00 0.00 0.00 4.00
602 604 1.904865 CCCATCAATCCGGCCCATG 60.905 63.158 0.00 0.00 0.00 3.66
603 605 1.152694 CCATCAATCCGGCCCATGT 60.153 57.895 0.00 0.00 0.00 3.21
604 606 1.174712 CCATCAATCCGGCCCATGTC 61.175 60.000 0.00 0.00 0.00 3.06
605 607 0.466007 CATCAATCCGGCCCATGTCA 60.466 55.000 0.00 0.00 0.00 3.58
606 608 0.466189 ATCAATCCGGCCCATGTCAC 60.466 55.000 0.00 0.00 0.00 3.67
607 609 1.378382 CAATCCGGCCCATGTCACA 60.378 57.895 0.00 0.00 0.00 3.58
608 610 0.752743 CAATCCGGCCCATGTCACAT 60.753 55.000 0.00 0.00 0.00 3.21
609 611 0.752743 AATCCGGCCCATGTCACATG 60.753 55.000 11.18 11.18 0.00 3.21
610 612 2.629424 ATCCGGCCCATGTCACATGG 62.629 60.000 27.88 27.88 38.88 3.66
611 613 3.520862 CGGCCCATGTCACATGGC 61.521 66.667 29.19 22.97 43.26 4.40
613 615 3.149648 GCCCATGTCACATGGCCC 61.150 66.667 29.19 18.49 37.94 5.80
614 616 2.829914 CCCATGTCACATGGCCCG 60.830 66.667 29.19 13.64 37.85 6.13
615 617 2.829914 CCATGTCACATGGCCCGG 60.830 66.667 24.12 0.00 31.75 5.73
616 618 2.271821 CATGTCACATGGCCCGGA 59.728 61.111 10.22 0.00 0.00 5.14
617 619 1.152902 CATGTCACATGGCCCGGAT 60.153 57.895 10.22 0.00 0.00 4.18
618 620 1.152902 ATGTCACATGGCCCGGATG 60.153 57.895 0.73 0.41 0.00 3.51
619 621 3.211963 GTCACATGGCCCGGATGC 61.212 66.667 0.73 0.00 0.00 3.91
641 643 3.274823 GGGACCCCATAATCCAGGA 57.725 57.895 0.00 0.00 36.65 3.86
642 644 0.771755 GGGACCCCATAATCCAGGAC 59.228 60.000 0.00 0.00 36.65 3.85
643 645 1.699257 GGGACCCCATAATCCAGGACT 60.699 57.143 0.00 0.00 36.65 3.85
644 646 1.700186 GGACCCCATAATCCAGGACTC 59.300 57.143 0.00 0.00 34.87 3.36
645 647 1.700186 GACCCCATAATCCAGGACTCC 59.300 57.143 0.00 0.00 0.00 3.85
646 648 1.068121 CCCCATAATCCAGGACTCCC 58.932 60.000 0.00 0.00 0.00 4.30
647 649 1.416608 CCCCATAATCCAGGACTCCCT 60.417 57.143 0.00 0.00 45.74 4.20
648 650 1.981495 CCCATAATCCAGGACTCCCTC 59.019 57.143 0.00 0.00 42.02 4.30
649 651 2.694397 CCATAATCCAGGACTCCCTCA 58.306 52.381 0.00 0.00 42.02 3.86
650 652 3.048600 CCATAATCCAGGACTCCCTCAA 58.951 50.000 0.00 0.00 42.02 3.02
651 653 3.072184 CCATAATCCAGGACTCCCTCAAG 59.928 52.174 0.00 0.00 42.02 3.02
652 654 2.649742 AATCCAGGACTCCCTCAAGA 57.350 50.000 0.00 0.00 42.02 3.02
653 655 1.872773 ATCCAGGACTCCCTCAAGAC 58.127 55.000 0.00 0.00 42.02 3.01
654 656 0.252284 TCCAGGACTCCCTCAAGACC 60.252 60.000 0.00 0.00 42.02 3.85
655 657 1.268283 CCAGGACTCCCTCAAGACCC 61.268 65.000 0.00 0.00 42.02 4.46
656 658 0.545309 CAGGACTCCCTCAAGACCCA 60.545 60.000 0.00 0.00 42.02 4.51
657 659 0.545548 AGGACTCCCTCAAGACCCAC 60.546 60.000 0.00 0.00 38.86 4.61
658 660 1.554583 GGACTCCCTCAAGACCCACC 61.555 65.000 0.00 0.00 0.00 4.61
659 661 0.545548 GACTCCCTCAAGACCCACCT 60.546 60.000 0.00 0.00 0.00 4.00
660 662 0.104409 ACTCCCTCAAGACCCACCTT 60.104 55.000 0.00 0.00 0.00 3.50
661 663 1.151413 ACTCCCTCAAGACCCACCTTA 59.849 52.381 0.00 0.00 0.00 2.69
662 664 2.266279 CTCCCTCAAGACCCACCTTAA 58.734 52.381 0.00 0.00 0.00 1.85
663 665 1.982958 TCCCTCAAGACCCACCTTAAC 59.017 52.381 0.00 0.00 0.00 2.01
664 666 1.702957 CCCTCAAGACCCACCTTAACA 59.297 52.381 0.00 0.00 0.00 2.41
665 667 2.308866 CCCTCAAGACCCACCTTAACAT 59.691 50.000 0.00 0.00 0.00 2.71
666 668 3.347216 CCTCAAGACCCACCTTAACATG 58.653 50.000 0.00 0.00 0.00 3.21
667 669 3.244911 CCTCAAGACCCACCTTAACATGT 60.245 47.826 0.00 0.00 0.00 3.21
668 670 4.019681 CCTCAAGACCCACCTTAACATGTA 60.020 45.833 0.00 0.00 0.00 2.29
669 671 5.514136 CCTCAAGACCCACCTTAACATGTAA 60.514 44.000 0.00 0.00 0.00 2.41
670 672 6.134535 TCAAGACCCACCTTAACATGTAAT 57.865 37.500 0.00 0.00 0.00 1.89
671 673 6.177610 TCAAGACCCACCTTAACATGTAATC 58.822 40.000 0.00 0.00 0.00 1.75
672 674 5.772393 AGACCCACCTTAACATGTAATCA 57.228 39.130 0.00 0.00 0.00 2.57
673 675 6.327386 AGACCCACCTTAACATGTAATCAT 57.673 37.500 0.00 0.00 34.21 2.45
674 676 7.446106 AGACCCACCTTAACATGTAATCATA 57.554 36.000 0.00 0.00 32.47 2.15
675 677 7.280356 AGACCCACCTTAACATGTAATCATAC 58.720 38.462 0.00 0.00 32.47 2.39
676 678 6.964464 ACCCACCTTAACATGTAATCATACA 58.036 36.000 0.00 0.00 45.67 2.29
705 707 8.664669 AAAAAGACCCACCATAATATTCAACT 57.335 30.769 0.00 0.00 0.00 3.16
706 708 9.762381 AAAAAGACCCACCATAATATTCAACTA 57.238 29.630 0.00 0.00 0.00 2.24
707 709 9.936329 AAAAGACCCACCATAATATTCAACTAT 57.064 29.630 0.00 0.00 0.00 2.12
710 712 9.615660 AGACCCACCATAATATTCAACTATAGA 57.384 33.333 6.78 0.00 0.00 1.98
1738 1769 3.687212 CCCAAAATTAACCAATTTCCGCC 59.313 43.478 0.00 0.00 42.29 6.13
1747 1778 0.806884 CAATTTCCGCCGCAATGCAT 60.807 50.000 5.91 0.00 0.00 3.96
1770 1801 3.070302 GGGGCATCCTCTAGTTACTTGAG 59.930 52.174 15.08 15.08 34.18 3.02
1799 1830 5.518128 CACGATCACAACAACAAATCCAAAA 59.482 36.000 0.00 0.00 0.00 2.44
1961 1995 6.420604 ACGAATTAACCAGAAAAACAATGCAG 59.579 34.615 0.00 0.00 0.00 4.41
2104 2138 9.367444 GCACTATACAATAATCACCTGTATACC 57.633 37.037 0.00 0.00 37.43 2.73
2118 2152 4.500127 CTGTATACCGACATCCACAAACA 58.500 43.478 0.00 0.00 0.00 2.83
2272 2306 0.790814 GTAACACAGGAGAGCGCAAC 59.209 55.000 11.47 2.78 0.00 4.17
2459 2573 9.515226 AGTAAAATGACTCCAAAGCTATAAACA 57.485 29.630 0.00 0.00 0.00 2.83
2465 2579 4.881850 ACTCCAAAGCTATAAACATTCCCG 59.118 41.667 0.00 0.00 0.00 5.14
2599 2713 1.002017 ATTGTCATGGGGGCTTGGG 59.998 57.895 0.00 0.00 0.00 4.12
2600 2714 3.903281 TTGTCATGGGGGCTTGGGC 62.903 63.158 0.00 0.00 37.82 5.36
2601 2715 4.380945 GTCATGGGGGCTTGGGCA 62.381 66.667 0.00 0.00 40.87 5.36
2602 2716 4.380945 TCATGGGGGCTTGGGCAC 62.381 66.667 0.00 0.00 42.01 5.01
2614 2728 3.056328 GGGCACCGGTTGAGAAGC 61.056 66.667 2.97 3.50 40.86 3.86
2615 2729 2.032681 GGCACCGGTTGAGAAGCT 59.967 61.111 2.97 0.00 0.00 3.74
2616 2730 1.295423 GGCACCGGTTGAGAAGCTA 59.705 57.895 2.97 0.00 0.00 3.32
2617 2731 0.741221 GGCACCGGTTGAGAAGCTAG 60.741 60.000 2.97 0.00 0.00 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.770499 TGGCCACCTTGAACAGATCA 59.230 50.000 0.00 0.00 35.85 2.92
82 84 0.672711 CCGTTTCGGGGGAGACTTTC 60.673 60.000 0.00 0.00 44.15 2.62
210 212 4.265056 ACGCACAGTTGGGACCCC 62.265 66.667 8.45 2.69 39.02 4.95
211 213 2.668550 GACGCACAGTTGGGACCC 60.669 66.667 2.45 2.45 39.02 4.46
212 214 1.961277 CAGACGCACAGTTGGGACC 60.961 63.158 0.00 0.00 39.02 4.46
213 215 1.961277 CCAGACGCACAGTTGGGAC 60.961 63.158 0.00 0.00 39.02 4.46
214 216 2.425592 CCAGACGCACAGTTGGGA 59.574 61.111 0.00 0.00 39.02 4.37
215 217 2.669569 CCCAGACGCACAGTTGGG 60.670 66.667 0.00 0.00 41.38 4.12
216 218 2.469465 ATCCCCAGACGCACAGTTGG 62.469 60.000 0.00 0.00 33.61 3.77
217 219 1.003355 ATCCCCAGACGCACAGTTG 60.003 57.895 0.00 0.00 0.00 3.16
218 220 1.296715 GATCCCCAGACGCACAGTT 59.703 57.895 0.00 0.00 0.00 3.16
219 221 2.982130 GATCCCCAGACGCACAGT 59.018 61.111 0.00 0.00 0.00 3.55
220 222 2.202797 CGATCCCCAGACGCACAG 60.203 66.667 0.00 0.00 0.00 3.66
221 223 2.225791 CTTCGATCCCCAGACGCACA 62.226 60.000 0.00 0.00 0.00 4.57
222 224 1.519455 CTTCGATCCCCAGACGCAC 60.519 63.158 0.00 0.00 0.00 5.34
223 225 2.721167 CCTTCGATCCCCAGACGCA 61.721 63.158 0.00 0.00 0.00 5.24
224 226 1.389609 TACCTTCGATCCCCAGACGC 61.390 60.000 0.00 0.00 0.00 5.19
225 227 1.108776 TTACCTTCGATCCCCAGACG 58.891 55.000 0.00 0.00 0.00 4.18
226 228 1.829222 TGTTACCTTCGATCCCCAGAC 59.171 52.381 0.00 0.00 0.00 3.51
227 229 2.108168 CTGTTACCTTCGATCCCCAGA 58.892 52.381 0.00 0.00 0.00 3.86
228 230 1.139058 CCTGTTACCTTCGATCCCCAG 59.861 57.143 0.00 0.00 0.00 4.45
229 231 1.200519 CCTGTTACCTTCGATCCCCA 58.799 55.000 0.00 0.00 0.00 4.96
230 232 1.413077 CTCCTGTTACCTTCGATCCCC 59.587 57.143 0.00 0.00 0.00 4.81
231 233 2.101082 GTCTCCTGTTACCTTCGATCCC 59.899 54.545 0.00 0.00 0.00 3.85
232 234 2.758979 TGTCTCCTGTTACCTTCGATCC 59.241 50.000 0.00 0.00 0.00 3.36
233 235 4.425520 CTTGTCTCCTGTTACCTTCGATC 58.574 47.826 0.00 0.00 0.00 3.69
234 236 3.195825 CCTTGTCTCCTGTTACCTTCGAT 59.804 47.826 0.00 0.00 0.00 3.59
235 237 2.561419 CCTTGTCTCCTGTTACCTTCGA 59.439 50.000 0.00 0.00 0.00 3.71
236 238 2.353803 CCCTTGTCTCCTGTTACCTTCG 60.354 54.545 0.00 0.00 0.00 3.79
237 239 2.904434 TCCCTTGTCTCCTGTTACCTTC 59.096 50.000 0.00 0.00 0.00 3.46
238 240 2.638363 GTCCCTTGTCTCCTGTTACCTT 59.362 50.000 0.00 0.00 0.00 3.50
239 241 2.258109 GTCCCTTGTCTCCTGTTACCT 58.742 52.381 0.00 0.00 0.00 3.08
240 242 1.975680 TGTCCCTTGTCTCCTGTTACC 59.024 52.381 0.00 0.00 0.00 2.85
241 243 2.609737 CGTGTCCCTTGTCTCCTGTTAC 60.610 54.545 0.00 0.00 0.00 2.50
242 244 1.616865 CGTGTCCCTTGTCTCCTGTTA 59.383 52.381 0.00 0.00 0.00 2.41
243 245 0.393077 CGTGTCCCTTGTCTCCTGTT 59.607 55.000 0.00 0.00 0.00 3.16
244 246 0.469331 TCGTGTCCCTTGTCTCCTGT 60.469 55.000 0.00 0.00 0.00 4.00
245 247 0.898320 ATCGTGTCCCTTGTCTCCTG 59.102 55.000 0.00 0.00 0.00 3.86
246 248 0.898320 CATCGTGTCCCTTGTCTCCT 59.102 55.000 0.00 0.00 0.00 3.69
247 249 0.108138 CCATCGTGTCCCTTGTCTCC 60.108 60.000 0.00 0.00 0.00 3.71
248 250 0.608640 ACCATCGTGTCCCTTGTCTC 59.391 55.000 0.00 0.00 0.00 3.36
249 251 1.056660 AACCATCGTGTCCCTTGTCT 58.943 50.000 0.00 0.00 0.00 3.41
250 252 2.344025 GTAACCATCGTGTCCCTTGTC 58.656 52.381 0.00 0.00 0.00 3.18
251 253 1.002773 GGTAACCATCGTGTCCCTTGT 59.997 52.381 0.00 0.00 0.00 3.16
252 254 1.734163 GGTAACCATCGTGTCCCTTG 58.266 55.000 0.00 0.00 0.00 3.61
266 268 1.196766 AGGGTCCGAACCTGGGTAAC 61.197 60.000 3.44 0.00 45.66 2.50
267 269 0.906282 GAGGGTCCGAACCTGGGTAA 60.906 60.000 10.61 0.00 45.66 2.85
268 270 1.305549 GAGGGTCCGAACCTGGGTA 60.306 63.158 10.61 0.00 45.66 3.69
269 271 2.606826 GAGGGTCCGAACCTGGGT 60.607 66.667 10.61 0.00 45.66 4.51
270 272 0.616679 TAAGAGGGTCCGAACCTGGG 60.617 60.000 10.61 0.00 45.66 4.45
271 273 1.272807 TTAAGAGGGTCCGAACCTGG 58.727 55.000 10.61 0.00 45.66 4.45
272 274 2.420129 CCATTAAGAGGGTCCGAACCTG 60.420 54.545 10.61 0.00 45.66 4.00
273 275 1.838077 CCATTAAGAGGGTCCGAACCT 59.162 52.381 4.04 4.04 45.66 3.50
274 276 1.835531 TCCATTAAGAGGGTCCGAACC 59.164 52.381 0.00 0.00 45.65 3.62
275 277 2.764572 TCTCCATTAAGAGGGTCCGAAC 59.235 50.000 0.00 0.00 34.46 3.95
276 278 3.110293 TCTCCATTAAGAGGGTCCGAA 57.890 47.619 0.00 0.00 34.46 4.30
277 279 2.840640 TCTCCATTAAGAGGGTCCGA 57.159 50.000 0.00 0.00 34.46 4.55
278 280 4.344102 TGTTATCTCCATTAAGAGGGTCCG 59.656 45.833 0.00 0.00 34.46 4.79
279 281 5.454897 GGTGTTATCTCCATTAAGAGGGTCC 60.455 48.000 0.00 0.00 34.46 4.46
280 282 5.454897 GGGTGTTATCTCCATTAAGAGGGTC 60.455 48.000 0.00 0.00 34.46 4.46
281 283 4.412528 GGGTGTTATCTCCATTAAGAGGGT 59.587 45.833 0.00 0.00 34.46 4.34
282 284 4.660771 AGGGTGTTATCTCCATTAAGAGGG 59.339 45.833 0.00 0.00 34.46 4.30
283 285 5.896073 AGGGTGTTATCTCCATTAAGAGG 57.104 43.478 0.00 0.00 34.46 3.69
284 286 7.604657 AGTAGGGTGTTATCTCCATTAAGAG 57.395 40.000 0.00 0.00 35.04 2.85
285 287 7.844779 AGAAGTAGGGTGTTATCTCCATTAAGA 59.155 37.037 0.00 0.00 0.00 2.10
286 288 8.024145 AGAAGTAGGGTGTTATCTCCATTAAG 57.976 38.462 0.00 0.00 0.00 1.85
287 289 7.989947 AGAAGTAGGGTGTTATCTCCATTAA 57.010 36.000 0.00 0.00 0.00 1.40
288 290 7.635089 GCAAGAAGTAGGGTGTTATCTCCATTA 60.635 40.741 0.00 0.00 0.00 1.90
289 291 6.653989 CAAGAAGTAGGGTGTTATCTCCATT 58.346 40.000 0.00 0.00 0.00 3.16
290 292 5.396884 GCAAGAAGTAGGGTGTTATCTCCAT 60.397 44.000 0.00 0.00 0.00 3.41
291 293 4.081087 GCAAGAAGTAGGGTGTTATCTCCA 60.081 45.833 0.00 0.00 0.00 3.86
292 294 4.162509 AGCAAGAAGTAGGGTGTTATCTCC 59.837 45.833 0.00 0.00 0.00 3.71
293 295 5.346181 AGCAAGAAGTAGGGTGTTATCTC 57.654 43.478 0.00 0.00 0.00 2.75
294 296 5.248477 TCAAGCAAGAAGTAGGGTGTTATCT 59.752 40.000 0.00 0.00 0.00 1.98
295 297 5.488341 TCAAGCAAGAAGTAGGGTGTTATC 58.512 41.667 0.00 0.00 0.00 1.75
296 298 5.499004 TCAAGCAAGAAGTAGGGTGTTAT 57.501 39.130 0.00 0.00 0.00 1.89
297 299 4.967084 TCAAGCAAGAAGTAGGGTGTTA 57.033 40.909 0.00 0.00 0.00 2.41
298 300 3.857157 TCAAGCAAGAAGTAGGGTGTT 57.143 42.857 0.00 0.00 0.00 3.32
299 301 4.074970 CAATCAAGCAAGAAGTAGGGTGT 58.925 43.478 0.00 0.00 0.00 4.16
300 302 4.154918 GTCAATCAAGCAAGAAGTAGGGTG 59.845 45.833 0.00 0.00 0.00 4.61
301 303 4.042187 AGTCAATCAAGCAAGAAGTAGGGT 59.958 41.667 0.00 0.00 0.00 4.34
302 304 4.583871 AGTCAATCAAGCAAGAAGTAGGG 58.416 43.478 0.00 0.00 0.00 3.53
303 305 6.205464 TCAAAGTCAATCAAGCAAGAAGTAGG 59.795 38.462 0.00 0.00 0.00 3.18
304 306 7.194607 TCAAAGTCAATCAAGCAAGAAGTAG 57.805 36.000 0.00 0.00 0.00 2.57
305 307 7.445096 TCATCAAAGTCAATCAAGCAAGAAGTA 59.555 33.333 0.00 0.00 0.00 2.24
306 308 6.263842 TCATCAAAGTCAATCAAGCAAGAAGT 59.736 34.615 0.00 0.00 0.00 3.01
307 309 6.675026 TCATCAAAGTCAATCAAGCAAGAAG 58.325 36.000 0.00 0.00 0.00 2.85
308 310 6.263842 ACTCATCAAAGTCAATCAAGCAAGAA 59.736 34.615 0.00 0.00 0.00 2.52
309 311 5.766670 ACTCATCAAAGTCAATCAAGCAAGA 59.233 36.000 0.00 0.00 0.00 3.02
310 312 6.010294 ACTCATCAAAGTCAATCAAGCAAG 57.990 37.500 0.00 0.00 0.00 4.01
311 313 7.692460 ATACTCATCAAAGTCAATCAAGCAA 57.308 32.000 0.00 0.00 0.00 3.91
312 314 7.496920 CCTATACTCATCAAAGTCAATCAAGCA 59.503 37.037 0.00 0.00 0.00 3.91
313 315 7.041508 CCCTATACTCATCAAAGTCAATCAAGC 60.042 40.741 0.00 0.00 0.00 4.01
314 316 7.443575 CCCCTATACTCATCAAAGTCAATCAAG 59.556 40.741 0.00 0.00 0.00 3.02
315 317 7.092444 ACCCCTATACTCATCAAAGTCAATCAA 60.092 37.037 0.00 0.00 0.00 2.57
316 318 6.386927 ACCCCTATACTCATCAAAGTCAATCA 59.613 38.462 0.00 0.00 0.00 2.57
317 319 6.831976 ACCCCTATACTCATCAAAGTCAATC 58.168 40.000 0.00 0.00 0.00 2.67
318 320 6.831664 ACCCCTATACTCATCAAAGTCAAT 57.168 37.500 0.00 0.00 0.00 2.57
319 321 6.636454 AACCCCTATACTCATCAAAGTCAA 57.364 37.500 0.00 0.00 0.00 3.18
320 322 6.670464 TGTAACCCCTATACTCATCAAAGTCA 59.330 38.462 0.00 0.00 0.00 3.41
321 323 7.120923 TGTAACCCCTATACTCATCAAAGTC 57.879 40.000 0.00 0.00 0.00 3.01
322 324 7.402071 TCTTGTAACCCCTATACTCATCAAAGT 59.598 37.037 0.00 0.00 0.00 2.66
323 325 7.792032 TCTTGTAACCCCTATACTCATCAAAG 58.208 38.462 0.00 0.00 0.00 2.77
324 326 7.402071 ACTCTTGTAACCCCTATACTCATCAAA 59.598 37.037 0.00 0.00 0.00 2.69
325 327 6.901300 ACTCTTGTAACCCCTATACTCATCAA 59.099 38.462 0.00 0.00 0.00 2.57
326 328 6.441222 ACTCTTGTAACCCCTATACTCATCA 58.559 40.000 0.00 0.00 0.00 3.07
327 329 6.980416 ACTCTTGTAACCCCTATACTCATC 57.020 41.667 0.00 0.00 0.00 2.92
328 330 6.901300 TCAACTCTTGTAACCCCTATACTCAT 59.099 38.462 0.00 0.00 0.00 2.90
329 331 6.258354 TCAACTCTTGTAACCCCTATACTCA 58.742 40.000 0.00 0.00 0.00 3.41
330 332 6.786967 TCAACTCTTGTAACCCCTATACTC 57.213 41.667 0.00 0.00 0.00 2.59
331 333 7.133483 AGATCAACTCTTGTAACCCCTATACT 58.867 38.462 0.00 0.00 0.00 2.12
332 334 7.362802 AGATCAACTCTTGTAACCCCTATAC 57.637 40.000 0.00 0.00 0.00 1.47
333 335 7.508296 GGTAGATCAACTCTTGTAACCCCTATA 59.492 40.741 0.00 0.00 35.28 1.31
334 336 6.326843 GGTAGATCAACTCTTGTAACCCCTAT 59.673 42.308 0.00 0.00 35.28 2.57
335 337 5.659971 GGTAGATCAACTCTTGTAACCCCTA 59.340 44.000 0.00 0.00 35.28 3.53
336 338 4.470304 GGTAGATCAACTCTTGTAACCCCT 59.530 45.833 0.00 0.00 35.28 4.79
337 339 4.470304 AGGTAGATCAACTCTTGTAACCCC 59.530 45.833 0.00 0.00 35.28 4.95
338 340 5.678955 AGGTAGATCAACTCTTGTAACCC 57.321 43.478 0.00 0.00 35.28 4.11
339 341 6.698380 TCAAGGTAGATCAACTCTTGTAACC 58.302 40.000 13.71 0.00 36.94 2.85
340 342 7.603651 TCTCAAGGTAGATCAACTCTTGTAAC 58.396 38.462 13.71 0.00 36.94 2.50
341 343 7.776618 TCTCAAGGTAGATCAACTCTTGTAA 57.223 36.000 13.71 5.35 36.94 2.41
342 344 7.962995 ATCTCAAGGTAGATCAACTCTTGTA 57.037 36.000 13.71 7.55 36.94 2.41
343 345 6.865834 ATCTCAAGGTAGATCAACTCTTGT 57.134 37.500 13.71 0.00 36.94 3.16
355 357 9.646427 GGTTTAGCTATTATGATCTCAAGGTAG 57.354 37.037 0.00 0.00 0.00 3.18
356 358 8.594550 GGGTTTAGCTATTATGATCTCAAGGTA 58.405 37.037 0.00 0.00 0.00 3.08
357 359 7.293535 AGGGTTTAGCTATTATGATCTCAAGGT 59.706 37.037 0.00 0.00 0.00 3.50
358 360 7.684529 AGGGTTTAGCTATTATGATCTCAAGG 58.315 38.462 0.00 0.00 0.00 3.61
359 361 9.868277 CTAGGGTTTAGCTATTATGATCTCAAG 57.132 37.037 0.00 0.00 0.00 3.02
360 362 9.601810 TCTAGGGTTTAGCTATTATGATCTCAA 57.398 33.333 0.00 0.00 0.00 3.02
361 363 9.775539 ATCTAGGGTTTAGCTATTATGATCTCA 57.224 33.333 0.00 0.00 0.00 3.27
363 365 9.554053 ACATCTAGGGTTTAGCTATTATGATCT 57.446 33.333 0.00 0.00 0.00 2.75
364 366 9.810545 GACATCTAGGGTTTAGCTATTATGATC 57.189 37.037 0.00 0.00 0.00 2.92
365 367 9.554053 AGACATCTAGGGTTTAGCTATTATGAT 57.446 33.333 0.00 0.00 0.00 2.45
366 368 8.958060 AGACATCTAGGGTTTAGCTATTATGA 57.042 34.615 0.00 0.00 0.00 2.15
368 370 8.973182 GCTAGACATCTAGGGTTTAGCTATTAT 58.027 37.037 20.66 0.00 44.63 1.28
369 371 7.948447 TGCTAGACATCTAGGGTTTAGCTATTA 59.052 37.037 24.56 11.90 44.67 0.98
370 372 6.782988 TGCTAGACATCTAGGGTTTAGCTATT 59.217 38.462 24.56 0.00 44.67 1.73
371 373 6.315714 TGCTAGACATCTAGGGTTTAGCTAT 58.684 40.000 24.56 0.00 44.67 2.97
372 374 5.702266 TGCTAGACATCTAGGGTTTAGCTA 58.298 41.667 24.56 15.42 44.67 3.32
373 375 4.547671 TGCTAGACATCTAGGGTTTAGCT 58.452 43.478 24.56 0.00 44.67 3.32
374 376 4.939052 TGCTAGACATCTAGGGTTTAGC 57.061 45.455 20.92 20.92 44.65 3.09
376 378 9.990868 TCATATATGCTAGACATCTAGGGTTTA 57.009 33.333 15.98 0.00 44.63 2.01
377 379 8.901472 TCATATATGCTAGACATCTAGGGTTT 57.099 34.615 15.98 0.00 44.63 3.27
378 380 9.499369 AATCATATATGCTAGACATCTAGGGTT 57.501 33.333 15.98 0.00 44.63 4.11
379 381 9.499369 AAATCATATATGCTAGACATCTAGGGT 57.501 33.333 15.98 0.00 44.63 4.34
380 382 9.761504 CAAATCATATATGCTAGACATCTAGGG 57.238 37.037 15.98 0.00 44.63 3.53
387 389 9.591792 GCTATCACAAATCATATATGCTAGACA 57.408 33.333 7.92 0.00 0.00 3.41
388 390 9.039870 GGCTATCACAAATCATATATGCTAGAC 57.960 37.037 7.92 0.00 0.00 2.59
389 391 8.985922 AGGCTATCACAAATCATATATGCTAGA 58.014 33.333 7.92 1.14 0.00 2.43
390 392 9.258826 GAGGCTATCACAAATCATATATGCTAG 57.741 37.037 7.92 1.02 0.00 3.42
391 393 8.985922 AGAGGCTATCACAAATCATATATGCTA 58.014 33.333 7.92 0.00 0.00 3.49
392 394 7.859540 AGAGGCTATCACAAATCATATATGCT 58.140 34.615 7.92 0.00 0.00 3.79
393 395 9.775854 ATAGAGGCTATCACAAATCATATATGC 57.224 33.333 7.92 0.00 0.00 3.14
396 398 9.492730 TCCATAGAGGCTATCACAAATCATATA 57.507 33.333 0.00 0.00 37.29 0.86
397 399 8.263640 GTCCATAGAGGCTATCACAAATCATAT 58.736 37.037 0.00 0.00 37.29 1.78
398 400 7.455953 AGTCCATAGAGGCTATCACAAATCATA 59.544 37.037 0.00 0.00 37.29 2.15
399 401 6.271857 AGTCCATAGAGGCTATCACAAATCAT 59.728 38.462 0.00 0.00 37.29 2.45
400 402 5.604231 AGTCCATAGAGGCTATCACAAATCA 59.396 40.000 0.00 0.00 37.29 2.57
401 403 6.107901 AGTCCATAGAGGCTATCACAAATC 57.892 41.667 0.00 0.00 37.29 2.17
402 404 7.618019 TTAGTCCATAGAGGCTATCACAAAT 57.382 36.000 0.00 0.00 37.29 2.32
403 405 7.272978 GTTTAGTCCATAGAGGCTATCACAAA 58.727 38.462 0.00 0.00 37.29 2.83
404 406 6.183360 GGTTTAGTCCATAGAGGCTATCACAA 60.183 42.308 0.00 0.00 37.29 3.33
405 407 5.304614 GGTTTAGTCCATAGAGGCTATCACA 59.695 44.000 0.00 0.00 37.29 3.58
406 408 5.279556 GGGTTTAGTCCATAGAGGCTATCAC 60.280 48.000 0.00 0.00 37.29 3.06
407 409 4.838986 GGGTTTAGTCCATAGAGGCTATCA 59.161 45.833 0.00 0.00 37.29 2.15
408 410 5.088026 AGGGTTTAGTCCATAGAGGCTATC 58.912 45.833 0.00 0.00 37.29 2.08
409 411 5.088026 GAGGGTTTAGTCCATAGAGGCTAT 58.912 45.833 0.00 0.00 37.29 2.97
410 412 4.481072 GAGGGTTTAGTCCATAGAGGCTA 58.519 47.826 0.00 0.00 37.29 3.93
411 413 3.310193 GAGGGTTTAGTCCATAGAGGCT 58.690 50.000 0.00 0.00 37.29 4.58
412 414 2.369203 GGAGGGTTTAGTCCATAGAGGC 59.631 54.545 0.00 0.00 37.29 4.70
413 415 3.643792 CTGGAGGGTTTAGTCCATAGAGG 59.356 52.174 0.00 0.00 42.10 3.69
414 416 4.290942 ACTGGAGGGTTTAGTCCATAGAG 58.709 47.826 0.00 0.00 42.10 2.43
415 417 4.348020 ACTGGAGGGTTTAGTCCATAGA 57.652 45.455 0.00 0.00 42.10 1.98
416 418 5.437191 AAACTGGAGGGTTTAGTCCATAG 57.563 43.478 0.00 0.00 42.10 2.23
417 419 8.808240 ATATAAACTGGAGGGTTTAGTCCATA 57.192 34.615 0.00 0.00 42.10 2.74
418 420 7.707467 ATATAAACTGGAGGGTTTAGTCCAT 57.293 36.000 0.00 0.00 42.10 3.41
419 421 8.069356 TCTATATAAACTGGAGGGTTTAGTCCA 58.931 37.037 0.00 0.00 42.46 4.02
420 422 8.366401 GTCTATATAAACTGGAGGGTTTAGTCC 58.634 40.741 0.00 0.00 42.46 3.85
421 423 8.921205 TGTCTATATAAACTGGAGGGTTTAGTC 58.079 37.037 0.00 0.00 42.46 2.59
422 424 8.702819 GTGTCTATATAAACTGGAGGGTTTAGT 58.297 37.037 0.00 0.00 42.46 2.24
423 425 8.148999 GGTGTCTATATAAACTGGAGGGTTTAG 58.851 40.741 0.00 0.00 42.46 1.85
424 426 7.201938 CGGTGTCTATATAAACTGGAGGGTTTA 60.202 40.741 0.00 0.00 43.06 2.01
425 427 6.407752 CGGTGTCTATATAAACTGGAGGGTTT 60.408 42.308 0.00 0.00 41.51 3.27
426 428 5.070047 CGGTGTCTATATAAACTGGAGGGTT 59.930 44.000 0.00 0.00 0.00 4.11
427 429 4.587684 CGGTGTCTATATAAACTGGAGGGT 59.412 45.833 0.00 0.00 0.00 4.34
428 430 4.021368 CCGGTGTCTATATAAACTGGAGGG 60.021 50.000 10.35 0.00 40.88 4.30
429 431 4.831155 TCCGGTGTCTATATAAACTGGAGG 59.169 45.833 0.00 2.13 41.98 4.30
431 433 4.831155 CCTCCGGTGTCTATATAAACTGGA 59.169 45.833 15.01 15.01 44.08 3.86
432 434 4.831155 TCCTCCGGTGTCTATATAAACTGG 59.169 45.833 0.00 9.86 39.94 4.00
433 435 5.565045 GCTCCTCCGGTGTCTATATAAACTG 60.565 48.000 0.00 0.00 0.00 3.16
434 436 4.523558 GCTCCTCCGGTGTCTATATAAACT 59.476 45.833 0.00 0.00 0.00 2.66
435 437 4.321824 GGCTCCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
436 438 3.830755 GGCTCCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
437 439 3.075582 AGGCTCCTCCGGTGTCTATATAA 59.924 47.826 0.00 0.00 40.77 0.98
438 440 2.648304 AGGCTCCTCCGGTGTCTATATA 59.352 50.000 0.00 0.00 40.77 0.86
439 441 1.429687 AGGCTCCTCCGGTGTCTATAT 59.570 52.381 0.00 0.00 40.77 0.86
440 442 0.851469 AGGCTCCTCCGGTGTCTATA 59.149 55.000 0.00 0.00 40.77 1.31
441 443 0.851469 TAGGCTCCTCCGGTGTCTAT 59.149 55.000 0.00 0.00 40.77 1.98
442 444 0.183014 CTAGGCTCCTCCGGTGTCTA 59.817 60.000 0.00 1.14 40.77 2.59
443 445 1.076632 CTAGGCTCCTCCGGTGTCT 60.077 63.158 0.00 0.00 40.77 3.41
444 446 2.128507 CCTAGGCTCCTCCGGTGTC 61.129 68.421 0.00 0.00 40.77 3.67
445 447 2.042843 CCTAGGCTCCTCCGGTGT 60.043 66.667 0.00 0.00 40.77 4.16
446 448 2.840102 CCCTAGGCTCCTCCGGTG 60.840 72.222 2.05 0.00 40.77 4.94
447 449 2.944668 AACCCTAGGCTCCTCCGGT 61.945 63.158 2.05 0.00 40.77 5.28
448 450 2.041819 AACCCTAGGCTCCTCCGG 60.042 66.667 2.05 0.00 40.77 5.14
449 451 0.396695 TACAACCCTAGGCTCCTCCG 60.397 60.000 2.05 0.00 40.77 4.63
450 452 1.121378 GTACAACCCTAGGCTCCTCC 58.879 60.000 2.05 0.00 0.00 4.30
451 453 1.861982 TGTACAACCCTAGGCTCCTC 58.138 55.000 2.05 0.00 0.00 3.71
452 454 2.337359 TTGTACAACCCTAGGCTCCT 57.663 50.000 3.59 0.00 0.00 3.69
453 455 2.305052 ACTTTGTACAACCCTAGGCTCC 59.695 50.000 8.07 0.00 0.00 4.70
454 456 3.597255 GACTTTGTACAACCCTAGGCTC 58.403 50.000 8.07 0.00 0.00 4.70
455 457 2.028385 CGACTTTGTACAACCCTAGGCT 60.028 50.000 8.07 0.00 0.00 4.58
456 458 2.344025 CGACTTTGTACAACCCTAGGC 58.656 52.381 8.07 4.20 0.00 3.93
457 459 2.301009 ACCGACTTTGTACAACCCTAGG 59.699 50.000 8.07 10.70 0.00 3.02
458 460 3.672767 ACCGACTTTGTACAACCCTAG 57.327 47.619 8.07 5.62 0.00 3.02
459 461 4.420522 AAACCGACTTTGTACAACCCTA 57.579 40.909 8.07 0.00 0.00 3.53
460 462 3.286329 AAACCGACTTTGTACAACCCT 57.714 42.857 8.07 0.00 0.00 4.34
461 463 3.876320 TGTAAACCGACTTTGTACAACCC 59.124 43.478 8.07 0.00 0.00 4.11
462 464 4.810491 TCTGTAAACCGACTTTGTACAACC 59.190 41.667 8.07 0.00 0.00 3.77
463 465 5.750067 TCTCTGTAAACCGACTTTGTACAAC 59.250 40.000 8.07 0.00 0.00 3.32
464 466 5.904941 TCTCTGTAAACCGACTTTGTACAA 58.095 37.500 3.59 3.59 0.00 2.41
465 467 5.518848 TCTCTGTAAACCGACTTTGTACA 57.481 39.130 0.00 0.00 0.00 2.90
466 468 6.833342 TTTCTCTGTAAACCGACTTTGTAC 57.167 37.500 0.00 0.00 0.00 2.90
467 469 9.545105 TTATTTTCTCTGTAAACCGACTTTGTA 57.455 29.630 0.00 0.00 0.00 2.41
468 470 6.937436 ATTTTCTCTGTAAACCGACTTTGT 57.063 33.333 0.00 0.00 0.00 2.83
469 471 9.893305 ATTTATTTTCTCTGTAAACCGACTTTG 57.107 29.630 0.00 0.00 0.00 2.77
475 477 9.257865 CGTGTAATTTATTTTCTCTGTAAACCG 57.742 33.333 0.00 0.00 0.00 4.44
479 481 8.649841 CGGACGTGTAATTTATTTTCTCTGTAA 58.350 33.333 0.00 0.00 0.00 2.41
480 482 7.276218 CCGGACGTGTAATTTATTTTCTCTGTA 59.724 37.037 0.00 0.00 0.00 2.74
481 483 6.091713 CCGGACGTGTAATTTATTTTCTCTGT 59.908 38.462 0.00 0.00 0.00 3.41
482 484 6.091713 ACCGGACGTGTAATTTATTTTCTCTG 59.908 38.462 9.46 0.00 0.00 3.35
483 485 6.168389 ACCGGACGTGTAATTTATTTTCTCT 58.832 36.000 9.46 0.00 0.00 3.10
484 486 6.413018 ACCGGACGTGTAATTTATTTTCTC 57.587 37.500 9.46 0.00 0.00 2.87
485 487 5.062558 CGACCGGACGTGTAATTTATTTTCT 59.937 40.000 18.29 0.00 0.00 2.52
486 488 5.250332 CGACCGGACGTGTAATTTATTTTC 58.750 41.667 18.29 0.00 0.00 2.29
487 489 4.435917 GCGACCGGACGTGTAATTTATTTT 60.436 41.667 26.10 0.00 35.59 1.82
488 490 3.062504 GCGACCGGACGTGTAATTTATTT 59.937 43.478 26.10 0.00 35.59 1.40
489 491 2.604462 GCGACCGGACGTGTAATTTATT 59.396 45.455 26.10 0.00 35.59 1.40
490 492 2.195922 GCGACCGGACGTGTAATTTAT 58.804 47.619 26.10 0.00 35.59 1.40
491 493 1.627879 GCGACCGGACGTGTAATTTA 58.372 50.000 26.10 0.00 35.59 1.40
492 494 1.015607 GGCGACCGGACGTGTAATTT 61.016 55.000 26.10 0.00 35.59 1.82
493 495 1.446618 GGCGACCGGACGTGTAATT 60.447 57.895 26.10 0.00 35.59 1.40
494 496 2.157305 TTGGCGACCGGACGTGTAAT 62.157 55.000 26.10 0.00 35.59 1.89
495 497 2.752322 CTTGGCGACCGGACGTGTAA 62.752 60.000 26.10 17.01 35.59 2.41
496 498 3.271706 CTTGGCGACCGGACGTGTA 62.272 63.158 26.10 11.08 35.59 2.90
497 499 4.657824 CTTGGCGACCGGACGTGT 62.658 66.667 26.10 0.00 35.59 4.49
501 503 3.423154 CAAGCTTGGCGACCGGAC 61.423 66.667 19.14 0.00 0.00 4.79
510 512 2.879907 CGTGGATGGCAAGCTTGG 59.120 61.111 27.10 9.80 0.00 3.61
511 513 2.144833 TTGCGTGGATGGCAAGCTTG 62.145 55.000 22.44 22.44 44.79 4.01
512 514 1.902918 TTGCGTGGATGGCAAGCTT 60.903 52.632 0.00 0.00 44.79 3.74
513 515 2.282391 TTGCGTGGATGGCAAGCT 60.282 55.556 0.00 0.00 44.79 3.74
517 519 1.675310 CTCCTTTGCGTGGATGGCA 60.675 57.895 0.00 0.00 38.93 4.92
518 520 1.372087 CTCTCCTTTGCGTGGATGGC 61.372 60.000 0.00 0.00 32.56 4.40
519 521 0.036010 ACTCTCCTTTGCGTGGATGG 60.036 55.000 0.00 0.00 32.56 3.51
520 522 1.363744 GACTCTCCTTTGCGTGGATG 58.636 55.000 0.00 0.00 32.56 3.51
521 523 0.250513 GGACTCTCCTTTGCGTGGAT 59.749 55.000 0.00 0.00 32.53 3.41
522 524 0.832135 AGGACTCTCCTTTGCGTGGA 60.832 55.000 0.00 0.00 46.91 4.02
523 525 0.895530 TAGGACTCTCCTTTGCGTGG 59.104 55.000 0.00 0.00 46.91 4.94
524 526 2.482142 GGATAGGACTCTCCTTTGCGTG 60.482 54.545 0.00 0.00 46.91 5.34
525 527 1.757699 GGATAGGACTCTCCTTTGCGT 59.242 52.381 0.00 0.00 46.91 5.24
526 528 1.269309 CGGATAGGACTCTCCTTTGCG 60.269 57.143 7.92 7.92 46.91 4.85
527 529 1.069358 CCGGATAGGACTCTCCTTTGC 59.931 57.143 0.00 0.00 46.91 3.68
528 530 2.667470 TCCGGATAGGACTCTCCTTTG 58.333 52.381 0.00 0.00 46.91 2.77
539 541 1.139058 CTTCCCTTGTGTCCGGATAGG 59.861 57.143 7.81 12.36 42.97 2.57
540 542 1.139058 CCTTCCCTTGTGTCCGGATAG 59.861 57.143 7.81 3.03 0.00 2.08
541 543 1.200519 CCTTCCCTTGTGTCCGGATA 58.799 55.000 7.81 0.10 0.00 2.59
542 544 1.991230 CCTTCCCTTGTGTCCGGAT 59.009 57.895 7.81 0.00 0.00 4.18
543 545 2.890766 GCCTTCCCTTGTGTCCGGA 61.891 63.158 0.00 0.00 0.00 5.14
544 546 2.359975 GCCTTCCCTTGTGTCCGG 60.360 66.667 0.00 0.00 0.00 5.14
545 547 2.359975 GGCCTTCCCTTGTGTCCG 60.360 66.667 0.00 0.00 0.00 4.79
546 548 3.171348 AGGCCTTCCCTTGTGTCC 58.829 61.111 0.00 0.00 43.06 4.02
554 556 4.595350 AGATACAAGATAGAAGGCCTTCCC 59.405 45.833 36.59 26.27 40.33 3.97
555 557 5.816955 AGATACAAGATAGAAGGCCTTCC 57.183 43.478 36.59 23.74 40.33 3.46
556 558 6.704050 GTGAAGATACAAGATAGAAGGCCTTC 59.296 42.308 34.25 34.25 39.78 3.46
557 559 6.587273 GTGAAGATACAAGATAGAAGGCCTT 58.413 40.000 20.65 20.65 0.00 4.35
558 560 5.221342 CGTGAAGATACAAGATAGAAGGCCT 60.221 44.000 0.00 0.00 0.00 5.19
559 561 4.985409 CGTGAAGATACAAGATAGAAGGCC 59.015 45.833 0.00 0.00 0.00 5.19
560 562 4.985409 CCGTGAAGATACAAGATAGAAGGC 59.015 45.833 0.00 0.00 0.00 4.35
561 563 4.985409 GCCGTGAAGATACAAGATAGAAGG 59.015 45.833 0.00 0.00 0.00 3.46
562 564 4.985409 GGCCGTGAAGATACAAGATAGAAG 59.015 45.833 0.00 0.00 0.00 2.85
563 565 4.202223 GGGCCGTGAAGATACAAGATAGAA 60.202 45.833 0.00 0.00 0.00 2.10
564 566 3.321111 GGGCCGTGAAGATACAAGATAGA 59.679 47.826 0.00 0.00 0.00 1.98
565 567 3.069586 TGGGCCGTGAAGATACAAGATAG 59.930 47.826 0.00 0.00 0.00 2.08
566 568 3.035363 TGGGCCGTGAAGATACAAGATA 58.965 45.455 0.00 0.00 0.00 1.98
567 569 1.837439 TGGGCCGTGAAGATACAAGAT 59.163 47.619 0.00 0.00 0.00 2.40
568 570 1.271856 TGGGCCGTGAAGATACAAGA 58.728 50.000 0.00 0.00 0.00 3.02
569 571 2.213499 GATGGGCCGTGAAGATACAAG 58.787 52.381 1.02 0.00 0.00 3.16
570 572 1.557371 TGATGGGCCGTGAAGATACAA 59.443 47.619 1.02 0.00 0.00 2.41
571 573 1.199615 TGATGGGCCGTGAAGATACA 58.800 50.000 1.02 0.00 0.00 2.29
572 574 2.325583 TTGATGGGCCGTGAAGATAC 57.674 50.000 1.02 0.00 0.00 2.24
573 575 2.224523 GGATTGATGGGCCGTGAAGATA 60.225 50.000 1.02 0.00 0.00 1.98
574 576 1.477558 GGATTGATGGGCCGTGAAGAT 60.478 52.381 1.02 0.00 0.00 2.40
575 577 0.107214 GGATTGATGGGCCGTGAAGA 60.107 55.000 1.02 0.00 0.00 2.87
576 578 1.439353 CGGATTGATGGGCCGTGAAG 61.439 60.000 1.02 0.00 40.17 3.02
577 579 1.451207 CGGATTGATGGGCCGTGAA 60.451 57.895 1.02 0.00 40.17 3.18
578 580 2.189257 CGGATTGATGGGCCGTGA 59.811 61.111 1.02 0.00 40.17 4.35
579 581 2.901840 CCGGATTGATGGGCCGTG 60.902 66.667 1.02 0.00 43.35 4.94
580 582 4.875713 GCCGGATTGATGGGCCGT 62.876 66.667 5.05 0.00 43.35 5.68
584 586 1.904865 CATGGGCCGGATTGATGGG 60.905 63.158 5.05 0.00 0.00 4.00
585 587 1.152694 ACATGGGCCGGATTGATGG 60.153 57.895 5.05 0.00 0.00 3.51
586 588 0.466007 TGACATGGGCCGGATTGATG 60.466 55.000 5.05 3.43 0.00 3.07
587 589 0.466189 GTGACATGGGCCGGATTGAT 60.466 55.000 5.05 0.00 0.00 2.57
588 590 1.077787 GTGACATGGGCCGGATTGA 60.078 57.895 5.05 0.00 0.00 2.57
589 591 0.752743 ATGTGACATGGGCCGGATTG 60.753 55.000 5.05 0.00 0.00 2.67
590 592 0.752743 CATGTGACATGGGCCGGATT 60.753 55.000 17.51 0.00 0.00 3.01
591 593 1.152902 CATGTGACATGGGCCGGAT 60.153 57.895 17.51 0.00 0.00 4.18
592 594 2.271821 CATGTGACATGGGCCGGA 59.728 61.111 17.51 0.00 0.00 5.14
593 595 2.829914 CCATGTGACATGGGCCGG 60.830 66.667 31.93 10.37 35.58 6.13
594 596 3.520862 GCCATGTGACATGGGCCG 61.521 66.667 37.30 18.38 40.55 6.13
597 599 2.829914 CGGGCCATGTGACATGGG 60.830 66.667 37.30 22.05 39.53 4.00
598 600 2.629424 ATCCGGGCCATGTGACATGG 62.629 60.000 34.34 34.34 41.99 3.66
599 601 1.152902 ATCCGGGCCATGTGACATG 60.153 57.895 18.28 18.28 0.00 3.21
600 602 1.152902 CATCCGGGCCATGTGACAT 60.153 57.895 4.39 0.00 0.00 3.06
601 603 2.271821 CATCCGGGCCATGTGACA 59.728 61.111 4.39 0.00 0.00 3.58
602 604 3.211963 GCATCCGGGCCATGTGAC 61.212 66.667 4.39 0.00 0.00 3.67
622 624 0.402861 TCCTGGATTATGGGGTCCCC 60.403 60.000 21.64 21.64 45.71 4.81
623 625 0.771755 GTCCTGGATTATGGGGTCCC 59.228 60.000 0.00 0.00 33.45 4.46
624 626 1.700186 GAGTCCTGGATTATGGGGTCC 59.300 57.143 0.00 0.00 35.02 4.46
625 627 1.700186 GGAGTCCTGGATTATGGGGTC 59.300 57.143 0.41 0.00 0.00 4.46
626 628 1.699257 GGGAGTCCTGGATTATGGGGT 60.699 57.143 9.58 0.00 0.00 4.95
627 629 1.068121 GGGAGTCCTGGATTATGGGG 58.932 60.000 9.58 0.00 0.00 4.96
628 630 1.981495 GAGGGAGTCCTGGATTATGGG 59.019 57.143 9.58 0.00 45.05 4.00
629 631 2.694397 TGAGGGAGTCCTGGATTATGG 58.306 52.381 9.58 0.00 45.05 2.74
630 632 3.969976 TCTTGAGGGAGTCCTGGATTATG 59.030 47.826 9.58 0.00 45.05 1.90
631 633 3.970640 GTCTTGAGGGAGTCCTGGATTAT 59.029 47.826 9.58 0.00 45.05 1.28
632 634 3.375699 GTCTTGAGGGAGTCCTGGATTA 58.624 50.000 9.58 0.00 45.05 1.75
633 635 2.192263 GTCTTGAGGGAGTCCTGGATT 58.808 52.381 9.58 0.00 45.05 3.01
634 636 1.623834 GGTCTTGAGGGAGTCCTGGAT 60.624 57.143 9.58 0.00 45.05 3.41
635 637 0.252284 GGTCTTGAGGGAGTCCTGGA 60.252 60.000 9.58 0.00 45.05 3.86
636 638 1.268283 GGGTCTTGAGGGAGTCCTGG 61.268 65.000 9.58 0.00 45.05 4.45
637 639 0.545309 TGGGTCTTGAGGGAGTCCTG 60.545 60.000 9.58 0.00 45.05 3.86
639 641 1.554583 GGTGGGTCTTGAGGGAGTCC 61.555 65.000 0.00 0.00 0.00 3.85
640 642 0.545548 AGGTGGGTCTTGAGGGAGTC 60.546 60.000 0.00 0.00 0.00 3.36
641 643 0.104409 AAGGTGGGTCTTGAGGGAGT 60.104 55.000 0.00 0.00 0.00 3.85
642 644 1.952621 TAAGGTGGGTCTTGAGGGAG 58.047 55.000 0.00 0.00 0.00 4.30
643 645 1.982958 GTTAAGGTGGGTCTTGAGGGA 59.017 52.381 0.00 0.00 0.00 4.20
644 646 1.702957 TGTTAAGGTGGGTCTTGAGGG 59.297 52.381 0.00 0.00 0.00 4.30
645 647 3.244911 ACATGTTAAGGTGGGTCTTGAGG 60.245 47.826 0.00 0.00 0.00 3.86
646 648 4.021102 ACATGTTAAGGTGGGTCTTGAG 57.979 45.455 0.00 0.00 0.00 3.02
647 649 5.570205 TTACATGTTAAGGTGGGTCTTGA 57.430 39.130 2.30 0.00 0.00 3.02
648 650 5.943416 TGATTACATGTTAAGGTGGGTCTTG 59.057 40.000 2.30 0.00 0.00 3.02
649 651 6.134535 TGATTACATGTTAAGGTGGGTCTT 57.865 37.500 2.30 0.00 0.00 3.01
650 652 5.772393 TGATTACATGTTAAGGTGGGTCT 57.228 39.130 2.30 0.00 0.00 3.85
651 653 7.051623 TGTATGATTACATGTTAAGGTGGGTC 58.948 38.462 2.30 0.00 37.87 4.46
652 654 6.964464 TGTATGATTACATGTTAAGGTGGGT 58.036 36.000 2.30 0.00 37.87 4.51
680 682 8.664669 AGTTGAATATTATGGTGGGTCTTTTT 57.335 30.769 0.00 0.00 0.00 1.94
681 683 9.936329 ATAGTTGAATATTATGGTGGGTCTTTT 57.064 29.630 0.00 0.00 0.00 2.27
684 686 9.615660 TCTATAGTTGAATATTATGGTGGGTCT 57.384 33.333 0.00 0.00 0.00 3.85
784 786 9.535878 GAGAAGGAACGAGAATTATATTTGACT 57.464 33.333 0.00 0.00 0.00 3.41
785 787 8.766151 GGAGAAGGAACGAGAATTATATTTGAC 58.234 37.037 0.00 0.00 0.00 3.18
786 788 8.705594 AGGAGAAGGAACGAGAATTATATTTGA 58.294 33.333 0.00 0.00 0.00 2.69
787 789 8.894768 AGGAGAAGGAACGAGAATTATATTTG 57.105 34.615 0.00 0.00 0.00 2.32
788 790 9.907229 AAAGGAGAAGGAACGAGAATTATATTT 57.093 29.630 0.00 0.00 0.00 1.40
789 791 9.549078 GAAAGGAGAAGGAACGAGAATTATATT 57.451 33.333 0.00 0.00 0.00 1.28
790 792 8.151596 GGAAAGGAGAAGGAACGAGAATTATAT 58.848 37.037 0.00 0.00 0.00 0.86
791 793 7.344871 AGGAAAGGAGAAGGAACGAGAATTATA 59.655 37.037 0.00 0.00 0.00 0.98
1692 1723 9.403583 GGGTTGATAGTATGAGAACCAAAATTA 57.596 33.333 13.57 0.00 38.26 1.40
1708 1739 9.719355 GAAATTGGTTAATTTTGGGTTGATAGT 57.281 29.630 0.00 0.00 44.35 2.12
1726 1757 1.215117 CATTGCGGCGGAAATTGGT 59.785 52.632 19.64 0.00 0.00 3.67
1747 1778 2.771943 CAAGTAACTAGAGGATGCCCCA 59.228 50.000 0.00 0.00 37.41 4.96
1770 1801 0.040425 GTTGTTGTGATCGTGGGCAC 60.040 55.000 0.00 0.00 35.63 5.01
1898 1932 6.268847 TGGTAATGGGCAGTTCAACTAAAAAT 59.731 34.615 0.00 0.00 0.00 1.82
1899 1933 5.598830 TGGTAATGGGCAGTTCAACTAAAAA 59.401 36.000 0.00 0.00 0.00 1.94
1961 1995 5.648092 AGTGATGGTTATTAGCAAACCTGAC 59.352 40.000 6.56 1.46 45.53 3.51
2028 2062 5.907391 GGTGACGAGTTTGAATTGTTAAGTG 59.093 40.000 0.00 0.00 0.00 3.16
2090 2124 3.964688 TGGATGTCGGTATACAGGTGATT 59.035 43.478 5.01 0.00 31.70 2.57
2104 2138 5.748152 ACATTTTCTTTGTTTGTGGATGTCG 59.252 36.000 0.00 0.00 0.00 4.35
2118 2152 5.634118 TGGATGGAGTCTGACATTTTCTTT 58.366 37.500 10.88 0.00 0.00 2.52
2272 2306 2.937149 CAGATGCTGTCAGTCCTCAATG 59.063 50.000 0.93 0.00 0.00 2.82
2459 2573 1.451387 GTTGACGATGGCCGGGAAT 60.451 57.895 2.18 0.00 43.93 3.01
2465 2579 1.139058 ACTATGAGGTTGACGATGGCC 59.861 52.381 0.00 0.00 0.00 5.36
2504 2618 8.581578 ACTAACACCAAATATCACCGAATTTTT 58.418 29.630 0.00 0.00 0.00 1.94
2575 2689 2.008268 GCCCCCATGACAATCTTGCG 62.008 60.000 0.00 0.00 0.00 4.85
2599 2713 2.755929 CTAGCTTCTCAACCGGTGC 58.244 57.895 8.52 5.93 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.