Multiple sequence alignment - TraesCS5B01G114800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G114800 chr5B 100.000 4882 0 0 1 4882 188021571 188016690 0.000000e+00 9016.0
1 TraesCS5B01G114800 chr5B 84.271 693 90 10 4030 4716 369487832 369488511 0.000000e+00 658.0
2 TraesCS5B01G114800 chr5B 92.355 327 23 2 531 855 636932095 636932421 9.570000e-127 464.0
3 TraesCS5B01G114800 chr5D 90.184 2832 177 41 2059 4880 138485281 138482541 0.000000e+00 3596.0
4 TraesCS5B01G114800 chr5D 96.497 885 29 2 920 1803 138491539 138490656 0.000000e+00 1461.0
5 TraesCS5B01G114800 chr5D 95.019 261 13 0 1798 2058 138485581 138485321 1.260000e-110 411.0
6 TraesCS5B01G114800 chr5D 76.727 275 52 10 2719 2986 334703616 334703885 5.090000e-30 143.0
7 TraesCS5B01G114800 chr5A 89.908 2834 169 37 2059 4872 184018912 184021648 0.000000e+00 3541.0
8 TraesCS5B01G114800 chr5A 94.917 1141 40 6 920 2058 184017748 184018872 0.000000e+00 1770.0
9 TraesCS5B01G114800 chr5A 89.020 510 39 7 6 502 690341760 690341255 2.500000e-172 616.0
10 TraesCS5B01G114800 chr5A 86.179 123 12 4 2718 2836 623027576 623027455 1.430000e-25 128.0
11 TraesCS5B01G114800 chr2B 85.501 869 99 17 4019 4880 361287979 361287131 0.000000e+00 881.0
12 TraesCS5B01G114800 chr2B 81.731 208 27 6 2772 2969 95859921 95859715 3.910000e-36 163.0
13 TraesCS5B01G114800 chr4B 85.253 868 108 13 4019 4880 644281074 644280221 0.000000e+00 876.0
14 TraesCS5B01G114800 chr4B 92.727 330 22 2 529 856 514068440 514068111 4.420000e-130 475.0
15 TraesCS5B01G114800 chr7B 89.961 508 40 4 6 506 648728296 648728799 0.000000e+00 645.0
16 TraesCS5B01G114800 chr7B 88.845 511 45 6 3 506 126029245 126029750 6.940000e-173 617.0
17 TraesCS5B01G114800 chr7B 92.661 327 22 2 531 855 648760227 648760553 2.060000e-128 470.0
18 TraesCS5B01G114800 chr7B 92.401 329 21 2 528 855 36601677 36601352 2.660000e-127 466.0
19 TraesCS5B01G114800 chr7B 81.516 541 85 10 4032 4568 487332034 487331505 9.710000e-117 431.0
20 TraesCS5B01G114800 chr7B 71.478 873 172 49 4019 4873 169305810 169304997 1.410000e-35 161.0
21 TraesCS5B01G114800 chr7B 71.533 548 114 28 4336 4873 372710394 372709879 5.170000e-20 110.0
22 TraesCS5B01G114800 chr3B 89.370 508 40 7 6 506 803197357 803197857 1.150000e-175 627.0
23 TraesCS5B01G114800 chr3B 88.327 514 44 9 1 506 638316319 638316824 1.940000e-168 603.0
24 TraesCS5B01G114800 chr3B 91.768 328 24 3 531 855 647898079 647897752 2.070000e-123 453.0
25 TraesCS5B01G114800 chr3B 82.328 232 34 7 2836 3066 341227212 341227437 1.390000e-45 195.0
26 TraesCS5B01G114800 chr4A 88.650 511 46 5 3 506 69275183 69275688 3.230000e-171 612.0
27 TraesCS5B01G114800 chr4A 88.650 511 46 5 3 506 379467848 379468353 3.230000e-171 612.0
28 TraesCS5B01G114800 chr4A 88.889 108 8 3 1897 2001 673448747 673448641 3.970000e-26 130.0
29 TraesCS5B01G114800 chr6B 88.824 510 39 7 6 502 77718010 77717506 1.160000e-170 610.0
30 TraesCS5B01G114800 chr6B 81.159 414 57 11 4032 4435 708589609 708589207 3.670000e-81 313.0
31 TraesCS5B01G114800 chr2D 88.627 510 44 6 6 506 287695787 287696291 4.180000e-170 608.0
32 TraesCS5B01G114800 chr2D 91.867 332 23 3 528 855 3954183 3954514 1.240000e-125 460.0
33 TraesCS5B01G114800 chr2D 91.566 332 24 3 528 855 4016377 4016708 5.760000e-124 455.0
34 TraesCS5B01G114800 chr1B 81.376 596 92 13 4032 4622 576741301 576741882 7.400000e-128 468.0
35 TraesCS5B01G114800 chr1B 92.025 326 24 2 530 853 120065686 120065361 1.600000e-124 457.0
36 TraesCS5B01G114800 chr1B 89.150 341 37 0 4328 4668 517351393 517351053 4.520000e-115 425.0
37 TraesCS5B01G114800 chr1B 84.637 358 44 10 2719 3070 390427077 390427429 3.620000e-91 346.0
38 TraesCS5B01G114800 chr1B 81.019 216 25 12 2718 2920 98903317 98903105 1.820000e-34 158.0
39 TraesCS5B01G114800 chr2A 90.778 347 28 4 522 865 158590869 158591214 1.240000e-125 460.0
40 TraesCS5B01G114800 chr1D 88.921 343 38 0 4328 4670 385048302 385047960 1.620000e-114 424.0
41 TraesCS5B01G114800 chr1D 85.366 123 10 7 2709 2824 169066307 169066428 2.390000e-23 121.0
42 TraesCS5B01G114800 chr1A 91.282 195 17 0 4479 4673 485177355 485177161 2.900000e-67 267.0
43 TraesCS5B01G114800 chr7D 73.131 856 177 33 4032 4872 204876330 204875513 1.740000e-64 257.0
44 TraesCS5B01G114800 chr7D 88.889 108 8 3 1897 2001 56946744 56946638 3.970000e-26 130.0
45 TraesCS5B01G114800 chr7D 88.235 102 10 1 1897 1996 249422602 249422501 2.390000e-23 121.0
46 TraesCS5B01G114800 chr7D 86.111 108 12 2 1891 1995 424268185 424268292 3.990000e-21 113.0
47 TraesCS5B01G114800 chr6D 78.864 317 51 12 2720 3029 143073595 143073288 2.980000e-47 200.0
48 TraesCS5B01G114800 chr3D 82.759 232 33 7 2836 3066 239613003 239613228 2.980000e-47 200.0
49 TraesCS5B01G114800 chr3D 93.750 80 5 0 2717 2796 401895913 401895834 2.390000e-23 121.0
50 TraesCS5B01G114800 chr3A 82.759 232 33 7 2836 3066 340285408 340285633 2.980000e-47 200.0
51 TraesCS5B01G114800 chrUn 80.309 259 41 5 4140 4397 22755196 22754947 2.320000e-43 187.0
52 TraesCS5B01G114800 chr7A 89.815 108 7 3 1897 2001 60731172 60731066 8.520000e-28 135.0
53 TraesCS5B01G114800 chr7A 84.211 114 15 2 1891 2001 138739648 138739535 1.860000e-19 108.0
54 TraesCS5B01G114800 chr4D 86.111 108 12 2 1891 1995 503868572 503868679 3.990000e-21 113.0
55 TraesCS5B01G114800 chr6A 86.667 105 9 2 2725 2824 297628546 297628650 1.440000e-20 111.0
56 TraesCS5B01G114800 chr6A 88.235 51 4 2 4027 4075 502914177 502914127 5.280000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G114800 chr5B 188016690 188021571 4881 True 9016.0 9016 100.0000 1 4882 1 chr5B.!!$R1 4881
1 TraesCS5B01G114800 chr5B 369487832 369488511 679 False 658.0 658 84.2710 4030 4716 1 chr5B.!!$F1 686
2 TraesCS5B01G114800 chr5D 138482541 138485581 3040 True 2003.5 3596 92.6015 1798 4880 2 chr5D.!!$R2 3082
3 TraesCS5B01G114800 chr5D 138490656 138491539 883 True 1461.0 1461 96.4970 920 1803 1 chr5D.!!$R1 883
4 TraesCS5B01G114800 chr5A 184017748 184021648 3900 False 2655.5 3541 92.4125 920 4872 2 chr5A.!!$F1 3952
5 TraesCS5B01G114800 chr5A 690341255 690341760 505 True 616.0 616 89.0200 6 502 1 chr5A.!!$R2 496
6 TraesCS5B01G114800 chr2B 361287131 361287979 848 True 881.0 881 85.5010 4019 4880 1 chr2B.!!$R2 861
7 TraesCS5B01G114800 chr4B 644280221 644281074 853 True 876.0 876 85.2530 4019 4880 1 chr4B.!!$R2 861
8 TraesCS5B01G114800 chr7B 648728296 648728799 503 False 645.0 645 89.9610 6 506 1 chr7B.!!$F2 500
9 TraesCS5B01G114800 chr7B 126029245 126029750 505 False 617.0 617 88.8450 3 506 1 chr7B.!!$F1 503
10 TraesCS5B01G114800 chr7B 487331505 487332034 529 True 431.0 431 81.5160 4032 4568 1 chr7B.!!$R4 536
11 TraesCS5B01G114800 chr3B 803197357 803197857 500 False 627.0 627 89.3700 6 506 1 chr3B.!!$F3 500
12 TraesCS5B01G114800 chr3B 638316319 638316824 505 False 603.0 603 88.3270 1 506 1 chr3B.!!$F2 505
13 TraesCS5B01G114800 chr4A 69275183 69275688 505 False 612.0 612 88.6500 3 506 1 chr4A.!!$F1 503
14 TraesCS5B01G114800 chr4A 379467848 379468353 505 False 612.0 612 88.6500 3 506 1 chr4A.!!$F2 503
15 TraesCS5B01G114800 chr6B 77717506 77718010 504 True 610.0 610 88.8240 6 502 1 chr6B.!!$R1 496
16 TraesCS5B01G114800 chr2D 287695787 287696291 504 False 608.0 608 88.6270 6 506 1 chr2D.!!$F3 500
17 TraesCS5B01G114800 chr1B 576741301 576741882 581 False 468.0 468 81.3760 4032 4622 1 chr1B.!!$F2 590
18 TraesCS5B01G114800 chr7D 204875513 204876330 817 True 257.0 257 73.1310 4032 4872 1 chr7D.!!$R2 840

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
910 925 0.391130 TGAGGGGAGAAAATGCGTCG 60.391 55.000 0.0 0.0 0.00 5.12 F
962 977 0.702902 TCTCTGTTCCCCTACCGACT 59.297 55.000 0.0 0.0 0.00 4.18 F
2611 2669 1.340502 TGTGTTTGGTCTTGCTCACCA 60.341 47.619 0.0 0.0 42.48 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2709 2767 1.925415 TTGCATCGCACAGTCATGCC 61.925 55.0 6.29 0.0 42.99 4.40 R
2717 2775 2.330440 ATATCCTGTTGCATCGCACA 57.670 45.0 0.00 0.0 38.71 4.57 R
3972 4041 0.036294 CCTCCGTGAGAAAACCCCTC 60.036 60.0 2.84 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 6.649155 ACTGAGTATATGTGTGTGCCAATAA 58.351 36.000 0.00 0.00 0.00 1.40
79 80 6.610075 AATCCTGCCAACTAAACATCAAAT 57.390 33.333 0.00 0.00 0.00 2.32
131 132 5.113446 AGGAAGTTGAATCATGCAGATCT 57.887 39.130 0.00 0.00 35.39 2.75
136 138 8.246180 GGAAGTTGAATCATGCAGATCTAAAAA 58.754 33.333 0.00 0.00 35.39 1.94
253 255 1.917955 CGTCGAAACATACTCATGCGT 59.082 47.619 0.00 0.00 35.39 5.24
257 259 4.032900 GTCGAAACATACTCATGCGTGATT 59.967 41.667 9.53 6.54 35.39 2.57
274 276 6.426633 TGCGTGATTTAGTTTCAAAGATCTCA 59.573 34.615 0.00 0.00 0.00 3.27
314 322 1.145759 GATCTGAATTCCGACGCGCA 61.146 55.000 5.73 0.00 0.00 6.09
397 405 6.721571 TCTGTTCGGAATGAAGTAATCAAC 57.278 37.500 0.00 0.00 42.54 3.18
422 430 6.855914 CGTGAACACATTTAATGCTAACAACT 59.144 34.615 4.68 0.00 0.00 3.16
423 431 8.012809 CGTGAACACATTTAATGCTAACAACTA 58.987 33.333 4.68 0.00 0.00 2.24
424 432 9.329913 GTGAACACATTTAATGCTAACAACTAG 57.670 33.333 4.68 0.00 0.00 2.57
506 521 3.513680 TCGACCAAATAGTGCGTATGT 57.486 42.857 0.00 0.00 0.00 2.29
507 522 4.635833 TCGACCAAATAGTGCGTATGTA 57.364 40.909 0.00 0.00 0.00 2.29
508 523 4.353737 TCGACCAAATAGTGCGTATGTAC 58.646 43.478 0.00 0.00 0.00 2.90
509 524 4.106909 CGACCAAATAGTGCGTATGTACA 58.893 43.478 0.00 0.00 32.48 2.90
510 525 4.206404 CGACCAAATAGTGCGTATGTACAG 59.794 45.833 0.33 0.00 32.48 2.74
511 526 5.333299 ACCAAATAGTGCGTATGTACAGA 57.667 39.130 0.33 0.00 32.48 3.41
512 527 5.914033 ACCAAATAGTGCGTATGTACAGAT 58.086 37.500 0.33 0.00 32.48 2.90
513 528 6.346096 ACCAAATAGTGCGTATGTACAGATT 58.654 36.000 0.33 2.36 32.48 2.40
514 529 6.821665 ACCAAATAGTGCGTATGTACAGATTT 59.178 34.615 0.33 7.80 32.61 2.17
515 530 7.335924 ACCAAATAGTGCGTATGTACAGATTTT 59.664 33.333 0.33 0.00 31.18 1.82
516 531 8.822855 CCAAATAGTGCGTATGTACAGATTTTA 58.177 33.333 0.33 0.00 31.18 1.52
519 534 9.542462 AATAGTGCGTATGTACAGATTTTATGT 57.458 29.630 0.33 0.00 32.48 2.29
521 536 8.575565 AGTGCGTATGTACAGATTTTATGTAG 57.424 34.615 0.33 0.00 33.94 2.74
522 537 8.195436 AGTGCGTATGTACAGATTTTATGTAGT 58.805 33.333 0.33 0.00 33.94 2.73
523 538 8.814235 GTGCGTATGTACAGATTTTATGTAGTT 58.186 33.333 0.33 0.00 33.94 2.24
524 539 9.373603 TGCGTATGTACAGATTTTATGTAGTTT 57.626 29.630 0.33 0.00 33.94 2.66
531 546 9.620660 GTACAGATTTTATGTAGTTTTTGTGGG 57.379 33.333 0.00 0.00 33.94 4.61
532 547 8.472007 ACAGATTTTATGTAGTTTTTGTGGGA 57.528 30.769 0.00 0.00 0.00 4.37
533 548 8.919145 ACAGATTTTATGTAGTTTTTGTGGGAA 58.081 29.630 0.00 0.00 0.00 3.97
534 549 9.191995 CAGATTTTATGTAGTTTTTGTGGGAAC 57.808 33.333 0.00 0.00 0.00 3.62
548 563 1.492764 GGGAACCGGATCCTCTAACA 58.507 55.000 27.91 0.00 40.86 2.41
549 564 2.047830 GGGAACCGGATCCTCTAACAT 58.952 52.381 27.91 0.00 40.86 2.71
550 565 2.438392 GGGAACCGGATCCTCTAACATT 59.562 50.000 27.91 0.00 40.86 2.71
551 566 3.467803 GGAACCGGATCCTCTAACATTG 58.532 50.000 22.87 0.00 36.50 2.82
552 567 3.134081 GGAACCGGATCCTCTAACATTGA 59.866 47.826 22.87 0.00 36.50 2.57
553 568 4.372656 GAACCGGATCCTCTAACATTGAG 58.627 47.826 9.46 0.00 0.00 3.02
554 569 3.643237 ACCGGATCCTCTAACATTGAGA 58.357 45.455 9.46 0.00 33.68 3.27
555 570 4.030913 ACCGGATCCTCTAACATTGAGAA 58.969 43.478 9.46 0.00 33.68 2.87
556 571 4.100189 ACCGGATCCTCTAACATTGAGAAG 59.900 45.833 9.46 0.00 33.68 2.85
557 572 4.342378 CCGGATCCTCTAACATTGAGAAGA 59.658 45.833 10.75 0.00 33.68 2.87
558 573 5.163405 CCGGATCCTCTAACATTGAGAAGAA 60.163 44.000 10.75 0.00 33.68 2.52
559 574 6.341316 CGGATCCTCTAACATTGAGAAGAAA 58.659 40.000 10.75 0.00 33.68 2.52
560 575 6.818644 CGGATCCTCTAACATTGAGAAGAAAA 59.181 38.462 10.75 0.00 33.68 2.29
561 576 7.010923 CGGATCCTCTAACATTGAGAAGAAAAG 59.989 40.741 10.75 0.00 33.68 2.27
562 577 7.826744 GGATCCTCTAACATTGAGAAGAAAAGT 59.173 37.037 3.84 0.00 33.68 2.66
563 578 9.225436 GATCCTCTAACATTGAGAAGAAAAGTT 57.775 33.333 0.00 0.00 33.68 2.66
565 580 9.712305 TCCTCTAACATTGAGAAGAAAAGTTAG 57.288 33.333 0.00 0.00 38.67 2.34
566 581 9.712305 CCTCTAACATTGAGAAGAAAAGTTAGA 57.288 33.333 0.00 0.00 41.85 2.10
571 586 8.093659 ACATTGAGAAGAAAAGTTAGAGAAGC 57.906 34.615 0.00 0.00 0.00 3.86
572 587 7.936301 ACATTGAGAAGAAAAGTTAGAGAAGCT 59.064 33.333 0.00 0.00 0.00 3.74
573 588 9.429359 CATTGAGAAGAAAAGTTAGAGAAGCTA 57.571 33.333 0.00 0.00 0.00 3.32
580 595 8.669946 AGAAAAGTTAGAGAAGCTATAATGCC 57.330 34.615 0.00 0.00 0.00 4.40
581 596 8.490311 AGAAAAGTTAGAGAAGCTATAATGCCT 58.510 33.333 0.00 0.00 0.00 4.75
582 597 9.765795 GAAAAGTTAGAGAAGCTATAATGCCTA 57.234 33.333 0.00 0.00 0.00 3.93
584 599 9.549078 AAAGTTAGAGAAGCTATAATGCCTAAC 57.451 33.333 0.00 0.00 35.84 2.34
585 600 8.485578 AGTTAGAGAAGCTATAATGCCTAACT 57.514 34.615 0.00 0.00 38.37 2.24
586 601 8.929487 AGTTAGAGAAGCTATAATGCCTAACTT 58.071 33.333 0.00 0.00 39.19 2.66
587 602 9.549078 GTTAGAGAAGCTATAATGCCTAACTTT 57.451 33.333 0.00 0.00 34.37 2.66
589 604 8.669946 AGAGAAGCTATAATGCCTAACTTTTC 57.330 34.615 0.00 0.00 0.00 2.29
590 605 8.490311 AGAGAAGCTATAATGCCTAACTTTTCT 58.510 33.333 0.00 0.00 0.00 2.52
591 606 9.114952 GAGAAGCTATAATGCCTAACTTTTCTT 57.885 33.333 0.00 0.00 0.00 2.52
592 607 9.114952 AGAAGCTATAATGCCTAACTTTTCTTC 57.885 33.333 0.00 0.00 0.00 2.87
593 608 9.114952 GAAGCTATAATGCCTAACTTTTCTTCT 57.885 33.333 0.00 0.00 0.00 2.85
594 609 9.467796 AAGCTATAATGCCTAACTTTTCTTCTT 57.532 29.630 0.00 0.00 0.00 2.52
595 610 9.467796 AGCTATAATGCCTAACTTTTCTTCTTT 57.532 29.630 0.00 0.00 0.00 2.52
596 611 9.723447 GCTATAATGCCTAACTTTTCTTCTTTC 57.277 33.333 0.00 0.00 0.00 2.62
601 616 9.746457 AATGCCTAACTTTTCTTCTTTCTATCT 57.254 29.630 0.00 0.00 0.00 1.98
657 672 7.915293 TTTGTAAATTGATGATCTACCGTGT 57.085 32.000 0.00 0.00 0.00 4.49
658 673 9.607988 ATTTGTAAATTGATGATCTACCGTGTA 57.392 29.630 0.00 0.00 0.00 2.90
659 674 7.997107 TGTAAATTGATGATCTACCGTGTAC 57.003 36.000 0.00 0.00 0.00 2.90
660 675 7.548967 TGTAAATTGATGATCTACCGTGTACA 58.451 34.615 0.00 0.00 0.00 2.90
661 676 8.201464 TGTAAATTGATGATCTACCGTGTACAT 58.799 33.333 0.00 0.00 0.00 2.29
662 677 9.042008 GTAAATTGATGATCTACCGTGTACATT 57.958 33.333 0.00 0.00 0.00 2.71
663 678 8.506168 AAATTGATGATCTACCGTGTACATTT 57.494 30.769 0.00 0.00 0.00 2.32
664 679 9.607988 AAATTGATGATCTACCGTGTACATTTA 57.392 29.630 0.00 0.00 0.00 1.40
665 680 9.778741 AATTGATGATCTACCGTGTACATTTAT 57.221 29.630 0.00 0.00 0.00 1.40
667 682 9.908152 TTGATGATCTACCGTGTACATTTATAG 57.092 33.333 0.00 0.00 0.00 1.31
668 683 9.074576 TGATGATCTACCGTGTACATTTATAGT 57.925 33.333 0.00 0.00 0.00 2.12
695 710 8.862325 ATTACATACAAAGAAACTGATGGTGA 57.138 30.769 0.00 0.00 0.00 4.02
696 711 8.684386 TTACATACAAAGAAACTGATGGTGAA 57.316 30.769 0.00 0.00 0.00 3.18
697 712 7.581213 ACATACAAAGAAACTGATGGTGAAA 57.419 32.000 0.00 0.00 0.00 2.69
698 713 8.181904 ACATACAAAGAAACTGATGGTGAAAT 57.818 30.769 0.00 0.00 0.00 2.17
699 714 9.295825 ACATACAAAGAAACTGATGGTGAAATA 57.704 29.630 0.00 0.00 0.00 1.40
750 765 7.933396 ACAGTAAATACCAACAGTAAACAACC 58.067 34.615 0.00 0.00 33.70 3.77
751 766 7.776500 ACAGTAAATACCAACAGTAAACAACCT 59.224 33.333 0.00 0.00 33.70 3.50
752 767 8.073768 CAGTAAATACCAACAGTAAACAACCTG 58.926 37.037 0.00 0.00 33.70 4.00
753 768 5.447624 AATACCAACAGTAAACAACCTGC 57.552 39.130 0.00 0.00 33.70 4.85
754 769 3.012934 ACCAACAGTAAACAACCTGCT 57.987 42.857 0.00 0.00 0.00 4.24
755 770 4.159244 ACCAACAGTAAACAACCTGCTA 57.841 40.909 0.00 0.00 0.00 3.49
756 771 4.528920 ACCAACAGTAAACAACCTGCTAA 58.471 39.130 0.00 0.00 0.00 3.09
757 772 4.337274 ACCAACAGTAAACAACCTGCTAAC 59.663 41.667 0.00 0.00 0.00 2.34
758 773 4.578928 CCAACAGTAAACAACCTGCTAACT 59.421 41.667 0.00 0.00 0.00 2.24
759 774 5.761234 CCAACAGTAAACAACCTGCTAACTA 59.239 40.000 0.00 0.00 0.00 2.24
760 775 6.430000 CCAACAGTAAACAACCTGCTAACTAT 59.570 38.462 0.00 0.00 0.00 2.12
761 776 7.360946 CCAACAGTAAACAACCTGCTAACTATC 60.361 40.741 0.00 0.00 0.00 2.08
762 777 7.005709 ACAGTAAACAACCTGCTAACTATCT 57.994 36.000 0.00 0.00 0.00 1.98
763 778 8.130671 ACAGTAAACAACCTGCTAACTATCTA 57.869 34.615 0.00 0.00 0.00 1.98
764 779 8.033626 ACAGTAAACAACCTGCTAACTATCTAC 58.966 37.037 0.00 0.00 0.00 2.59
765 780 8.251721 CAGTAAACAACCTGCTAACTATCTACT 58.748 37.037 0.00 0.00 0.00 2.57
766 781 9.471702 AGTAAACAACCTGCTAACTATCTACTA 57.528 33.333 0.00 0.00 0.00 1.82
768 783 8.999220 AAACAACCTGCTAACTATCTACTAAC 57.001 34.615 0.00 0.00 0.00 2.34
769 784 7.713734 ACAACCTGCTAACTATCTACTAACA 57.286 36.000 0.00 0.00 0.00 2.41
770 785 7.773149 ACAACCTGCTAACTATCTACTAACAG 58.227 38.462 0.00 0.00 0.00 3.16
771 786 7.396623 ACAACCTGCTAACTATCTACTAACAGT 59.603 37.037 0.00 0.00 0.00 3.55
772 787 7.571080 ACCTGCTAACTATCTACTAACAGTC 57.429 40.000 0.00 0.00 0.00 3.51
773 788 7.348033 ACCTGCTAACTATCTACTAACAGTCT 58.652 38.462 0.00 0.00 0.00 3.24
774 789 7.835181 ACCTGCTAACTATCTACTAACAGTCTT 59.165 37.037 0.00 0.00 0.00 3.01
775 790 8.688151 CCTGCTAACTATCTACTAACAGTCTTT 58.312 37.037 0.00 0.00 0.00 2.52
786 801 9.978044 TCTACTAACAGTCTTTAACTTTCCTTC 57.022 33.333 0.00 0.00 35.45 3.46
787 802 9.984190 CTACTAACAGTCTTTAACTTTCCTTCT 57.016 33.333 0.00 0.00 35.45 2.85
789 804 9.327628 ACTAACAGTCTTTAACTTTCCTTCTTC 57.672 33.333 0.00 0.00 35.45 2.87
790 805 9.326413 CTAACAGTCTTTAACTTTCCTTCTTCA 57.674 33.333 0.00 0.00 35.45 3.02
791 806 8.753497 AACAGTCTTTAACTTTCCTTCTTCAT 57.247 30.769 0.00 0.00 35.45 2.57
792 807 8.753497 ACAGTCTTTAACTTTCCTTCTTCATT 57.247 30.769 0.00 0.00 35.45 2.57
793 808 9.190317 ACAGTCTTTAACTTTCCTTCTTCATTT 57.810 29.630 0.00 0.00 35.45 2.32
816 831 9.938280 ATTTTATACTAGACAAACACTGTAGCA 57.062 29.630 0.00 0.00 38.84 3.49
817 832 8.752766 TTTATACTAGACAAACACTGTAGCAC 57.247 34.615 0.00 0.00 38.84 4.40
818 833 3.991367 ACTAGACAAACACTGTAGCACC 58.009 45.455 0.00 0.00 38.84 5.01
819 834 1.865865 AGACAAACACTGTAGCACCG 58.134 50.000 0.00 0.00 38.84 4.94
820 835 1.138266 AGACAAACACTGTAGCACCGT 59.862 47.619 0.00 0.00 38.84 4.83
821 836 1.260561 GACAAACACTGTAGCACCGTG 59.739 52.381 8.50 8.50 38.84 4.94
822 837 1.134640 ACAAACACTGTAGCACCGTGA 60.135 47.619 14.34 0.00 35.69 4.35
823 838 1.260561 CAAACACTGTAGCACCGTGAC 59.739 52.381 14.34 0.00 35.69 3.67
824 839 0.750850 AACACTGTAGCACCGTGACT 59.249 50.000 14.34 1.79 35.69 3.41
825 840 0.750850 ACACTGTAGCACCGTGACTT 59.249 50.000 14.34 0.00 35.69 3.01
826 841 1.138266 ACACTGTAGCACCGTGACTTT 59.862 47.619 14.34 0.00 35.69 2.66
827 842 1.792949 CACTGTAGCACCGTGACTTTC 59.207 52.381 1.65 0.00 35.69 2.62
828 843 1.270147 ACTGTAGCACCGTGACTTTCC 60.270 52.381 1.65 0.00 0.00 3.13
829 844 1.000955 CTGTAGCACCGTGACTTTCCT 59.999 52.381 1.65 0.00 0.00 3.36
830 845 1.414919 TGTAGCACCGTGACTTTCCTT 59.585 47.619 1.65 0.00 0.00 3.36
831 846 2.067013 GTAGCACCGTGACTTTCCTTC 58.933 52.381 1.65 0.00 0.00 3.46
832 847 0.468226 AGCACCGTGACTTTCCTTCA 59.532 50.000 1.65 0.00 0.00 3.02
833 848 0.586802 GCACCGTGACTTTCCTTCAC 59.413 55.000 1.65 0.00 40.10 3.18
834 849 1.948104 CACCGTGACTTTCCTTCACA 58.052 50.000 0.00 0.00 43.09 3.58
835 850 2.285083 CACCGTGACTTTCCTTCACAA 58.715 47.619 0.00 0.00 43.09 3.33
836 851 2.878406 CACCGTGACTTTCCTTCACAAT 59.122 45.455 0.00 0.00 43.09 2.71
837 852 2.878406 ACCGTGACTTTCCTTCACAATG 59.122 45.455 3.58 0.00 43.09 2.82
838 853 2.878406 CCGTGACTTTCCTTCACAATGT 59.122 45.455 3.58 0.00 43.09 2.71
839 854 3.315191 CCGTGACTTTCCTTCACAATGTT 59.685 43.478 3.58 0.00 43.09 2.71
840 855 4.513692 CCGTGACTTTCCTTCACAATGTTA 59.486 41.667 3.58 0.00 43.09 2.41
841 856 5.334105 CCGTGACTTTCCTTCACAATGTTAG 60.334 44.000 3.58 0.00 43.09 2.34
842 857 5.465390 CGTGACTTTCCTTCACAATGTTAGA 59.535 40.000 3.58 0.00 43.09 2.10
843 858 6.346919 CGTGACTTTCCTTCACAATGTTAGAG 60.347 42.308 3.58 0.00 43.09 2.43
844 859 5.997746 TGACTTTCCTTCACAATGTTAGAGG 59.002 40.000 1.31 1.31 0.00 3.69
845 860 6.183361 TGACTTTCCTTCACAATGTTAGAGGA 60.183 38.462 5.38 5.38 0.00 3.71
846 861 6.784031 ACTTTCCTTCACAATGTTAGAGGAT 58.216 36.000 9.15 0.00 0.00 3.24
847 862 6.881602 ACTTTCCTTCACAATGTTAGAGGATC 59.118 38.462 9.15 0.00 0.00 3.36
848 863 5.359194 TCCTTCACAATGTTAGAGGATCC 57.641 43.478 2.48 2.48 33.66 3.36
849 864 4.122776 CCTTCACAATGTTAGAGGATCCG 58.877 47.826 5.98 0.00 33.66 4.18
850 865 3.819564 TCACAATGTTAGAGGATCCGG 57.180 47.619 5.98 0.00 33.66 5.14
851 866 3.104512 TCACAATGTTAGAGGATCCGGT 58.895 45.455 5.98 0.00 33.66 5.28
852 867 3.517901 TCACAATGTTAGAGGATCCGGTT 59.482 43.478 5.98 0.00 33.66 4.44
853 868 3.871594 CACAATGTTAGAGGATCCGGTTC 59.128 47.826 5.98 1.67 33.66 3.62
854 869 3.118371 ACAATGTTAGAGGATCCGGTTCC 60.118 47.826 22.05 22.05 33.66 3.62
855 870 1.108776 TGTTAGAGGATCCGGTTCCG 58.891 55.000 22.98 4.08 40.94 4.30
856 871 1.109609 GTTAGAGGATCCGGTTCCGT 58.890 55.000 22.98 17.37 40.94 4.69
857 872 1.479730 GTTAGAGGATCCGGTTCCGTT 59.520 52.381 22.98 17.66 40.94 4.44
858 873 1.856629 TAGAGGATCCGGTTCCGTTT 58.143 50.000 22.98 15.54 40.94 3.60
859 874 0.981943 AGAGGATCCGGTTCCGTTTT 59.018 50.000 22.98 8.19 40.94 2.43
860 875 1.350019 AGAGGATCCGGTTCCGTTTTT 59.650 47.619 22.98 7.83 40.94 1.94
899 914 4.566426 AAAAGACTGAAGATGAGGGGAG 57.434 45.455 0.00 0.00 0.00 4.30
900 915 3.481559 AAGACTGAAGATGAGGGGAGA 57.518 47.619 0.00 0.00 0.00 3.71
901 916 3.481559 AGACTGAAGATGAGGGGAGAA 57.518 47.619 0.00 0.00 0.00 2.87
902 917 3.796111 AGACTGAAGATGAGGGGAGAAA 58.204 45.455 0.00 0.00 0.00 2.52
903 918 4.171234 AGACTGAAGATGAGGGGAGAAAA 58.829 43.478 0.00 0.00 0.00 2.29
904 919 4.787534 AGACTGAAGATGAGGGGAGAAAAT 59.212 41.667 0.00 0.00 0.00 1.82
905 920 4.853007 ACTGAAGATGAGGGGAGAAAATG 58.147 43.478 0.00 0.00 0.00 2.32
906 921 3.624777 TGAAGATGAGGGGAGAAAATGC 58.375 45.455 0.00 0.00 0.00 3.56
907 922 2.338577 AGATGAGGGGAGAAAATGCG 57.661 50.000 0.00 0.00 0.00 4.73
908 923 1.561542 AGATGAGGGGAGAAAATGCGT 59.438 47.619 0.00 0.00 0.00 5.24
909 924 1.943340 GATGAGGGGAGAAAATGCGTC 59.057 52.381 0.00 0.00 0.00 5.19
910 925 0.391130 TGAGGGGAGAAAATGCGTCG 60.391 55.000 0.00 0.00 0.00 5.12
911 926 1.078426 AGGGGAGAAAATGCGTCGG 60.078 57.895 0.00 0.00 0.00 4.79
912 927 2.761195 GGGGAGAAAATGCGTCGGC 61.761 63.158 0.00 0.00 40.52 5.54
962 977 0.702902 TCTCTGTTCCCCTACCGACT 59.297 55.000 0.00 0.00 0.00 4.18
992 1007 3.296322 AGACAGCGAAGAGAAGAACAG 57.704 47.619 0.00 0.00 0.00 3.16
1384 1399 1.679032 GCGAAACCTAGTGGGCTTGAT 60.679 52.381 0.00 0.00 39.10 2.57
1408 1423 2.139118 TGCAATGTTGTGTCGATTCGA 58.861 42.857 4.29 4.29 0.00 3.71
1426 1441 4.200838 TCGATTGGTGATGCAAGTAAGA 57.799 40.909 0.00 0.00 0.00 2.10
1497 1513 3.737850 TGGTCATCCAAAATTTTGTGCC 58.262 40.909 25.25 20.91 41.25 5.01
1563 1579 5.196341 TGTACTTCTTGTCTGTAGTGTGG 57.804 43.478 0.00 0.00 0.00 4.17
1611 1627 5.824624 ACTATTAACATGCCTTCTGGACATG 59.175 40.000 13.67 13.67 45.10 3.21
1616 1632 2.118313 TGCCTTCTGGACATGACATG 57.882 50.000 14.02 14.02 34.57 3.21
1651 1667 9.413734 TGAAATATGTTCAGATCTACTCTCTCA 57.586 33.333 0.00 0.00 29.16 3.27
1679 1695 5.308497 TGGAAATGTAGGGACTAGTTTGACA 59.692 40.000 0.00 0.02 44.14 3.58
1680 1696 5.642491 GGAAATGTAGGGACTAGTTTGACAC 59.358 44.000 0.00 0.00 44.14 3.67
1707 1723 5.886960 AGTGTGAGCTTTGACCATAAATC 57.113 39.130 0.00 0.00 0.00 2.17
1872 1888 6.260936 CAGTCAAATTACGCCCTATGATTTCT 59.739 38.462 0.00 0.00 0.00 2.52
1908 1924 5.487488 ACTGTCAAATAATGTACTCCCTCCA 59.513 40.000 0.00 0.00 0.00 3.86
1923 1939 7.166758 ACTCCCTCCAATCCATATTAATTGT 57.833 36.000 0.00 0.00 32.20 2.71
1924 1940 7.595488 ACTCCCTCCAATCCATATTAATTGTT 58.405 34.615 0.00 0.00 32.20 2.83
1927 1943 6.458210 CCTCCAATCCATATTAATTGTTGCC 58.542 40.000 0.00 0.00 32.20 4.52
1937 1953 7.589954 CCATATTAATTGTTGCCGCTTTAGTAC 59.410 37.037 0.00 0.00 0.00 2.73
1978 1994 6.317910 GCTAAAGCACCGACAATTAATTTG 57.682 37.500 0.00 0.00 41.59 2.32
2035 2051 3.890756 TCCGTCAGTACTTGGTAGACAAA 59.109 43.478 10.02 0.00 38.91 2.83
2076 2131 2.096496 CCAGCTCGCAAGGAACATAAAG 59.904 50.000 0.00 0.00 38.47 1.85
2078 2133 3.189287 CAGCTCGCAAGGAACATAAAGTT 59.811 43.478 0.00 0.00 44.93 2.66
2192 2247 8.383175 AGTAGAATGAACAATCCTGAGGTTTAA 58.617 33.333 0.00 0.00 0.00 1.52
2290 2346 4.220602 GGCCTTTTCCTTTTAGAGATGCAA 59.779 41.667 0.00 0.00 0.00 4.08
2393 2449 9.337396 CTTTATACCTGTTTACAGATATTGGCA 57.663 33.333 11.35 0.00 46.59 4.92
2413 2469 5.954296 GCAATGTTATGCAGGTATCATCT 57.046 39.130 0.00 0.00 45.70 2.90
2415 2471 7.069852 GCAATGTTATGCAGGTATCATCTAG 57.930 40.000 0.00 0.00 45.70 2.43
2428 2484 6.047359 AGGTATCATCTAGACCCTGGTAATCT 59.953 42.308 0.00 0.00 40.63 2.40
2504 2560 3.730594 TGTGGATCCTACTAGGGGTGATA 59.269 47.826 14.23 0.00 35.59 2.15
2517 2575 1.818060 GGGTGATAATGTGTGCTGCAA 59.182 47.619 2.77 0.00 0.00 4.08
2576 2634 7.770897 ACTAGGATCCTTACAAAAGCATAGTTG 59.229 37.037 22.03 0.00 0.00 3.16
2611 2669 1.340502 TGTGTTTGGTCTTGCTCACCA 60.341 47.619 0.00 0.00 42.48 4.17
2642 2700 5.875359 GGTGTTTCTTCCTACCATAGTTCTG 59.125 44.000 0.00 0.00 33.42 3.02
2657 2715 4.487714 AGTTCTGTCTGTCCACTGAAAA 57.512 40.909 0.00 0.00 36.38 2.29
2717 2775 0.530744 CTTGCATTGCAGGCATGACT 59.469 50.000 17.85 0.00 41.58 3.41
2784 2842 7.523293 TGATTTACCTGCCCATATTAATGTG 57.477 36.000 5.27 5.27 0.00 3.21
2787 2845 8.725606 ATTTACCTGCCCATATTAATGTGATT 57.274 30.769 13.30 0.00 0.00 2.57
2832 2890 5.128205 GCCCGTGATTTACCTACCTAAATT 58.872 41.667 0.00 0.00 0.00 1.82
2892 2952 9.154847 AGCAAAGAAAACATAATTTTATCTGGC 57.845 29.630 0.00 0.00 0.00 4.85
2923 2983 1.713297 AGGTGGGACAGTTAAGACGT 58.287 50.000 0.00 0.00 41.80 4.34
3015 3078 5.998363 GGAGGAACATATGTAAGGTTGGATC 59.002 44.000 9.21 0.00 0.00 3.36
3042 3105 1.533753 TGCTTGGCAGGAAAAGGGG 60.534 57.895 0.00 0.00 33.32 4.79
3106 3174 7.575414 TTTATATAATTTCGCAGGGCTTTCA 57.425 32.000 0.00 0.00 0.00 2.69
3119 3187 2.599659 GGCTTTCATGCTTTTCTTCGG 58.400 47.619 0.00 0.00 0.00 4.30
3187 3255 3.121030 CCAAAGCTGTCCGCGGAG 61.121 66.667 31.97 19.86 45.59 4.63
3195 3263 1.880271 CTGTCCGCGGAGATCTAGTA 58.120 55.000 31.97 0.00 0.00 1.82
3217 3285 0.109153 TGCTCTGCTCTTTCAAGGCA 59.891 50.000 0.00 0.00 33.35 4.75
3557 3625 4.012895 GTTCCAGTGCGCCGTGTG 62.013 66.667 4.18 0.00 0.00 3.82
3635 3703 3.257393 CTTCAAGGACACTGGAGAATCG 58.743 50.000 0.00 0.00 34.37 3.34
3653 3721 6.173339 AGAATCGTCTGGTAATGTTGATGTT 58.827 36.000 0.00 0.00 30.83 2.71
3659 3727 6.148811 CGTCTGGTAATGTTGATGTTACCTTT 59.851 38.462 13.56 0.00 46.39 3.11
3706 3774 1.137872 CTGATTCCTTGACCTAGCGCT 59.862 52.381 17.26 17.26 0.00 5.92
3823 3891 7.364200 TCGGTGTTTCATGTAATTCGATTTTT 58.636 30.769 0.00 0.00 0.00 1.94
3854 3922 1.377725 GGAGGTGGCAGACATGTGG 60.378 63.158 1.15 0.00 0.00 4.17
3903 3972 5.186021 TCCACTTGTGTTGTGTTATTTGGTT 59.814 36.000 0.00 0.00 33.92 3.67
3904 3973 5.872070 CCACTTGTGTTGTGTTATTTGGTTT 59.128 36.000 0.00 0.00 33.92 3.27
3921 3990 6.412362 TTGGTTTAGTTACATTGTGCCAAT 57.588 33.333 0.00 0.00 0.00 3.16
3923 3992 5.167845 GGTTTAGTTACATTGTGCCAATGG 58.832 41.667 23.27 0.00 32.14 3.16
3930 3999 4.420522 ACATTGTGCCAATGGTTTTCTT 57.579 36.364 23.27 6.18 32.14 2.52
3961 4030 1.308783 GCTGCCCCTTTCTAGTGTGC 61.309 60.000 0.00 0.00 0.00 4.57
3969 4038 3.686726 CCCTTTCTAGTGTGCAATGTCTC 59.313 47.826 0.00 0.00 0.00 3.36
3971 4040 5.337571 CCCTTTCTAGTGTGCAATGTCTCTA 60.338 44.000 0.00 0.00 0.00 2.43
3972 4041 5.809562 CCTTTCTAGTGTGCAATGTCTCTAG 59.190 44.000 0.00 0.00 32.48 2.43
3973 4042 6.350528 CCTTTCTAGTGTGCAATGTCTCTAGA 60.351 42.308 8.83 8.83 36.02 2.43
3974 4043 5.826601 TCTAGTGTGCAATGTCTCTAGAG 57.173 43.478 13.98 13.98 34.24 2.43
3975 4044 3.883830 AGTGTGCAATGTCTCTAGAGG 57.116 47.619 19.67 4.32 0.00 3.69
3976 4045 2.499289 AGTGTGCAATGTCTCTAGAGGG 59.501 50.000 19.67 6.02 0.00 4.30
3977 4046 1.833630 TGTGCAATGTCTCTAGAGGGG 59.166 52.381 19.67 6.34 0.00 4.79
3978 4047 1.834263 GTGCAATGTCTCTAGAGGGGT 59.166 52.381 19.67 3.12 0.00 4.95
3979 4048 2.237392 GTGCAATGTCTCTAGAGGGGTT 59.763 50.000 19.67 8.89 0.00 4.11
3980 4049 2.912956 TGCAATGTCTCTAGAGGGGTTT 59.087 45.455 19.67 6.18 0.00 3.27
3981 4050 3.330701 TGCAATGTCTCTAGAGGGGTTTT 59.669 43.478 19.67 4.55 0.00 2.43
3982 4051 3.942115 GCAATGTCTCTAGAGGGGTTTTC 59.058 47.826 19.67 1.14 0.00 2.29
3983 4052 4.323868 GCAATGTCTCTAGAGGGGTTTTCT 60.324 45.833 19.67 0.00 0.00 2.52
3984 4053 5.423886 CAATGTCTCTAGAGGGGTTTTCTC 58.576 45.833 19.67 1.20 0.00 2.87
3985 4054 4.127918 TGTCTCTAGAGGGGTTTTCTCA 57.872 45.455 19.67 3.46 33.92 3.27
3986 4055 3.833070 TGTCTCTAGAGGGGTTTTCTCAC 59.167 47.826 19.67 6.90 33.92 3.51
3995 4064 1.348696 GGGTTTTCTCACGGAGGGTAA 59.651 52.381 1.76 0.00 0.00 2.85
4012 4081 2.987149 GGTAACATGCGATCAGGATACG 59.013 50.000 0.00 0.00 46.39 3.06
4079 4154 0.037447 AAGCAGAAGAGAGTTGCCCC 59.963 55.000 0.00 0.00 38.58 5.80
4080 4155 1.377856 GCAGAAGAGAGTTGCCCCC 60.378 63.158 0.00 0.00 31.79 5.40
4083 4158 1.074566 CAGAAGAGAGTTGCCCCCTTT 59.925 52.381 0.00 0.00 0.00 3.11
4085 4160 2.573915 AGAAGAGAGTTGCCCCCTTTAG 59.426 50.000 0.00 0.00 0.00 1.85
4086 4161 0.621082 AGAGAGTTGCCCCCTTTAGC 59.379 55.000 0.00 0.00 0.00 3.09
4087 4162 0.744771 GAGAGTTGCCCCCTTTAGCG 60.745 60.000 0.00 0.00 0.00 4.26
4114 4193 3.315191 CCGGGCGAAAATCATGATAAACT 59.685 43.478 9.04 0.00 0.00 2.66
4126 4207 5.069318 TCATGATAAACTGTTGAGTGGCAA 58.931 37.500 0.00 0.00 30.61 4.52
4158 4241 1.095228 CACACACGCCACTCCAAAGT 61.095 55.000 0.00 0.00 35.60 2.66
4181 4264 3.495100 GGGCCTCATCGAGACAATACAAT 60.495 47.826 0.84 0.00 0.00 2.71
4221 4304 2.025226 TCTTCCCTAGAGGTGTCATCGT 60.025 50.000 0.00 0.00 36.75 3.73
4248 4333 1.325355 AACTCCGAGAAACGACTCCA 58.675 50.000 1.33 0.00 45.77 3.86
4250 4335 1.684983 ACTCCGAGAAACGACTCCAAA 59.315 47.619 1.33 0.00 45.77 3.28
4256 4341 4.261031 CCGAGAAACGACTCCAAATTTGTT 60.261 41.667 16.73 2.77 45.77 2.83
4298 4383 2.357637 CCCACACTGAAAATGACGTGTT 59.642 45.455 0.00 0.00 38.44 3.32
4301 4386 4.028383 CACACTGAAAATGACGTGTTGAC 58.972 43.478 0.00 0.00 38.44 3.18
4307 4392 3.944422 AAATGACGTGTTGACTGACAC 57.056 42.857 0.00 0.00 44.97 3.67
4308 4393 2.890808 ATGACGTGTTGACTGACACT 57.109 45.000 0.00 0.00 45.96 3.55
4309 4394 1.921243 TGACGTGTTGACTGACACTG 58.079 50.000 0.00 3.42 45.96 3.66
4313 4398 3.331150 ACGTGTTGACTGACACTGAAAA 58.669 40.909 6.59 0.00 45.96 2.29
4314 4399 3.938963 ACGTGTTGACTGACACTGAAAAT 59.061 39.130 6.59 0.00 45.96 1.82
4315 4400 4.201812 ACGTGTTGACTGACACTGAAAATG 60.202 41.667 6.59 0.00 45.96 2.32
4317 4402 5.266242 GTGTTGACTGACACTGAAAATGAC 58.734 41.667 1.17 0.00 44.99 3.06
4318 4403 4.033932 TGTTGACTGACACTGAAAATGACG 59.966 41.667 0.00 0.00 0.00 4.35
4319 4404 3.792401 TGACTGACACTGAAAATGACGT 58.208 40.909 0.00 0.00 0.00 4.34
4320 4405 3.555547 TGACTGACACTGAAAATGACGTG 59.444 43.478 0.00 0.00 0.00 4.49
4321 4406 3.531538 ACTGACACTGAAAATGACGTGT 58.468 40.909 0.00 0.00 42.72 4.49
4322 4407 3.938963 ACTGACACTGAAAATGACGTGTT 59.061 39.130 0.00 0.00 40.37 3.32
4323 4408 4.201812 ACTGACACTGAAAATGACGTGTTG 60.202 41.667 0.00 0.00 40.37 3.33
4324 4409 3.935828 TGACACTGAAAATGACGTGTTGA 59.064 39.130 0.00 0.00 40.37 3.18
4325 4410 4.574421 TGACACTGAAAATGACGTGTTGAT 59.426 37.500 0.00 0.00 40.37 2.57
4405 4492 1.377856 GGAGAACCAGGCAAGGCTC 60.378 63.158 0.00 0.00 35.97 4.70
4451 4538 0.807667 CACCTGCTACCTGTCATCGC 60.808 60.000 0.00 0.00 0.00 4.58
4484 4571 0.456312 CCGTCACTGTAGCTTCGACC 60.456 60.000 0.00 0.00 0.00 4.79
4489 4576 2.826128 TCACTGTAGCTTCGACCTCAAT 59.174 45.455 0.00 0.00 0.00 2.57
4490 4577 3.119459 TCACTGTAGCTTCGACCTCAATC 60.119 47.826 0.00 0.00 0.00 2.67
4515 4603 3.414193 CCAGCTGAGGCCATCCCA 61.414 66.667 17.39 0.00 39.73 4.37
4516 4604 2.124403 CAGCTGAGGCCATCCCAC 60.124 66.667 8.42 0.00 39.73 4.61
4517 4605 3.790437 AGCTGAGGCCATCCCACG 61.790 66.667 5.01 0.00 39.73 4.94
4518 4606 3.785859 GCTGAGGCCATCCCACGA 61.786 66.667 5.01 0.00 35.39 4.35
4519 4607 2.989639 CTGAGGCCATCCCACGAA 59.010 61.111 5.01 0.00 35.39 3.85
4520 4608 1.450312 CTGAGGCCATCCCACGAAC 60.450 63.158 5.01 0.00 35.39 3.95
4521 4609 2.184020 CTGAGGCCATCCCACGAACA 62.184 60.000 5.01 0.00 35.39 3.18
4522 4610 1.224592 GAGGCCATCCCACGAACAT 59.775 57.895 5.01 0.00 35.39 2.71
4523 4611 1.077501 AGGCCATCCCACGAACATG 60.078 57.895 5.01 0.00 35.39 3.21
4524 4612 2.774799 GGCCATCCCACGAACATGC 61.775 63.158 0.00 0.00 0.00 4.06
4525 4613 1.750399 GCCATCCCACGAACATGCT 60.750 57.895 0.00 0.00 0.00 3.79
4526 4614 1.996786 GCCATCCCACGAACATGCTG 61.997 60.000 0.00 0.00 0.00 4.41
4527 4615 1.430632 CATCCCACGAACATGCTGC 59.569 57.895 0.00 0.00 0.00 5.25
4528 4616 1.002257 ATCCCACGAACATGCTGCA 60.002 52.632 4.13 4.13 0.00 4.41
4529 4617 1.028330 ATCCCACGAACATGCTGCAG 61.028 55.000 10.11 10.11 0.00 4.41
4530 4618 1.672030 CCCACGAACATGCTGCAGA 60.672 57.895 20.43 2.70 0.00 4.26
4531 4619 1.236616 CCCACGAACATGCTGCAGAA 61.237 55.000 20.43 7.68 0.00 3.02
4532 4620 0.167470 CCACGAACATGCTGCAGAAG 59.833 55.000 20.43 8.48 0.00 2.85
4533 4621 1.150827 CACGAACATGCTGCAGAAGA 58.849 50.000 20.43 0.00 0.00 2.87
4534 4622 1.128136 CACGAACATGCTGCAGAAGAG 59.872 52.381 20.43 6.65 0.00 2.85
4535 4623 0.096628 CGAACATGCTGCAGAAGAGC 59.903 55.000 20.43 2.17 36.95 4.09
4536 4624 0.450983 GAACATGCTGCAGAAGAGCC 59.549 55.000 20.43 0.00 35.43 4.70
4537 4625 1.303799 AACATGCTGCAGAAGAGCCG 61.304 55.000 20.43 0.00 35.43 5.52
4538 4626 1.449070 CATGCTGCAGAAGAGCCGA 60.449 57.895 20.43 0.00 35.43 5.54
4539 4627 1.449246 ATGCTGCAGAAGAGCCGAC 60.449 57.895 20.43 0.00 35.43 4.79
4540 4628 2.817396 GCTGCAGAAGAGCCGACC 60.817 66.667 20.43 0.00 0.00 4.79
4583 4697 0.528924 TACATCGTTCCCCGTGACAG 59.471 55.000 0.00 0.00 37.94 3.51
4601 4716 0.541296 AGCATTGCCACAGAAGCCTT 60.541 50.000 4.70 0.00 0.00 4.35
4656 4775 0.170339 GCCGATGCCCAACTACAAAC 59.830 55.000 0.00 0.00 0.00 2.93
4686 4813 1.158484 CGAGAGGAGATACGACGCCA 61.158 60.000 0.00 0.00 32.29 5.69
4687 4814 0.308376 GAGAGGAGATACGACGCCAC 59.692 60.000 0.00 0.00 32.29 5.01
4688 4815 0.393944 AGAGGAGATACGACGCCACA 60.394 55.000 0.00 0.00 32.29 4.17
4689 4816 0.454600 GAGGAGATACGACGCCACAA 59.545 55.000 0.00 0.00 32.29 3.33
4690 4817 0.172803 AGGAGATACGACGCCACAAC 59.827 55.000 0.00 0.00 32.29 3.32
4691 4818 0.108992 GGAGATACGACGCCACAACA 60.109 55.000 0.00 0.00 0.00 3.33
4692 4819 0.989890 GAGATACGACGCCACAACAC 59.010 55.000 0.00 0.00 0.00 3.32
4693 4820 0.389426 AGATACGACGCCACAACACC 60.389 55.000 0.00 0.00 0.00 4.16
4706 4833 1.449601 AACACCGCCATCATCCGAC 60.450 57.895 0.00 0.00 0.00 4.79
4719 4846 1.459455 ATCCGACCGCTCAGGATCTG 61.459 60.000 0.00 0.00 40.48 2.90
4845 4972 2.203480 GCTGGTCAAAGGCCCACA 60.203 61.111 0.00 0.00 0.00 4.17
4848 4976 0.890996 CTGGTCAAAGGCCCACAGAC 60.891 60.000 0.00 2.55 0.00 3.51
4866 4994 1.070289 GACGAGACAGGGTTTTCACCT 59.930 52.381 0.00 0.00 43.65 4.00
4872 5000 3.075148 GACAGGGTTTTCACCTAAGCTC 58.925 50.000 0.00 0.00 43.65 4.09
4873 5001 2.076863 CAGGGTTTTCACCTAAGCTCG 58.923 52.381 0.00 0.00 43.65 5.03
4880 5008 1.835494 TCACCTAAGCTCGTAGCACT 58.165 50.000 9.09 0.00 45.56 4.40
4881 5009 1.743958 TCACCTAAGCTCGTAGCACTC 59.256 52.381 9.09 0.00 45.56 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.604164 GCATGGTAATATAGTCTAGTTGCACAT 59.396 37.037 0.00 0.00 0.00 3.21
27 28 4.877823 CACACACATATACTCAGTTGGCAT 59.122 41.667 0.00 0.00 0.00 4.40
28 29 4.252878 CACACACATATACTCAGTTGGCA 58.747 43.478 0.00 0.00 0.00 4.92
57 58 6.610075 AATTTGATGTTTAGTTGGCAGGAT 57.390 33.333 0.00 0.00 0.00 3.24
79 80 2.813754 GCAGTCTAGCAACCATGACAAA 59.186 45.455 0.00 0.00 32.41 2.83
253 255 7.334171 TGCGATGAGATCTTTGAAACTAAATCA 59.666 33.333 0.00 0.00 0.00 2.57
257 259 6.873605 TCTTGCGATGAGATCTTTGAAACTAA 59.126 34.615 0.00 0.00 0.00 2.24
274 276 2.993899 CCGTTTTCACTACTCTTGCGAT 59.006 45.455 0.00 0.00 0.00 4.58
347 355 6.589523 CAGATCCACGCAAATTTATTTTGGAA 59.410 34.615 11.80 0.82 44.10 3.53
360 368 2.143122 GAACAGAACAGATCCACGCAA 58.857 47.619 0.00 0.00 0.00 4.85
397 405 6.855914 AGTTGTTAGCATTAAATGTGTTCACG 59.144 34.615 0.00 0.00 0.00 4.35
488 503 5.345702 TCTGTACATACGCACTATTTGGTC 58.654 41.667 0.00 0.00 0.00 4.02
506 521 9.575868 TCCCACAAAAACTACATAAAATCTGTA 57.424 29.630 0.00 0.00 0.00 2.74
507 522 8.472007 TCCCACAAAAACTACATAAAATCTGT 57.528 30.769 0.00 0.00 0.00 3.41
508 523 9.191995 GTTCCCACAAAAACTACATAAAATCTG 57.808 33.333 0.00 0.00 0.00 2.90
509 524 8.364894 GGTTCCCACAAAAACTACATAAAATCT 58.635 33.333 0.00 0.00 0.00 2.40
510 525 7.327518 CGGTTCCCACAAAAACTACATAAAATC 59.672 37.037 0.00 0.00 0.00 2.17
511 526 7.149307 CGGTTCCCACAAAAACTACATAAAAT 58.851 34.615 0.00 0.00 0.00 1.82
512 527 6.461231 CCGGTTCCCACAAAAACTACATAAAA 60.461 38.462 0.00 0.00 0.00 1.52
513 528 5.009811 CCGGTTCCCACAAAAACTACATAAA 59.990 40.000 0.00 0.00 0.00 1.40
514 529 4.519730 CCGGTTCCCACAAAAACTACATAA 59.480 41.667 0.00 0.00 0.00 1.90
515 530 4.073549 CCGGTTCCCACAAAAACTACATA 58.926 43.478 0.00 0.00 0.00 2.29
516 531 2.888414 CCGGTTCCCACAAAAACTACAT 59.112 45.455 0.00 0.00 0.00 2.29
517 532 2.092538 TCCGGTTCCCACAAAAACTACA 60.093 45.455 0.00 0.00 0.00 2.74
518 533 2.574450 TCCGGTTCCCACAAAAACTAC 58.426 47.619 0.00 0.00 0.00 2.73
519 534 3.414269 GATCCGGTTCCCACAAAAACTA 58.586 45.455 0.00 0.00 0.00 2.24
520 535 2.235891 GATCCGGTTCCCACAAAAACT 58.764 47.619 0.00 0.00 0.00 2.66
521 536 1.271379 GGATCCGGTTCCCACAAAAAC 59.729 52.381 19.41 0.00 0.00 2.43
522 537 1.146152 AGGATCCGGTTCCCACAAAAA 59.854 47.619 25.10 0.00 36.35 1.94
523 538 0.774908 AGGATCCGGTTCCCACAAAA 59.225 50.000 25.10 0.00 36.35 2.44
524 539 0.326927 GAGGATCCGGTTCCCACAAA 59.673 55.000 25.10 0.00 36.35 2.83
525 540 0.546747 AGAGGATCCGGTTCCCACAA 60.547 55.000 25.10 0.00 36.35 3.33
526 541 0.337082 TAGAGGATCCGGTTCCCACA 59.663 55.000 25.10 9.71 36.35 4.17
527 542 1.138464 GTTAGAGGATCCGGTTCCCAC 59.862 57.143 25.10 19.35 36.35 4.61
528 543 1.273381 TGTTAGAGGATCCGGTTCCCA 60.273 52.381 25.10 14.16 36.35 4.37
529 544 1.492764 TGTTAGAGGATCCGGTTCCC 58.507 55.000 25.10 17.15 36.35 3.97
530 545 3.134081 TCAATGTTAGAGGATCCGGTTCC 59.866 47.826 22.05 22.05 33.66 3.62
531 546 4.099573 TCTCAATGTTAGAGGATCCGGTTC 59.900 45.833 5.98 1.67 33.66 3.62
532 547 4.030913 TCTCAATGTTAGAGGATCCGGTT 58.969 43.478 5.98 0.00 33.66 4.44
533 548 3.643237 TCTCAATGTTAGAGGATCCGGT 58.357 45.455 5.98 0.00 33.66 5.28
534 549 4.342378 TCTTCTCAATGTTAGAGGATCCGG 59.658 45.833 5.98 0.00 33.66 5.14
535 550 5.521906 TCTTCTCAATGTTAGAGGATCCG 57.478 43.478 5.98 0.00 33.66 4.18
536 551 7.826744 ACTTTTCTTCTCAATGTTAGAGGATCC 59.173 37.037 2.48 2.48 33.66 3.36
537 552 8.785329 ACTTTTCTTCTCAATGTTAGAGGATC 57.215 34.615 0.00 0.00 30.22 3.36
539 554 9.712305 CTAACTTTTCTTCTCAATGTTAGAGGA 57.288 33.333 10.66 0.00 40.74 3.71
540 555 9.712305 TCTAACTTTTCTTCTCAATGTTAGAGG 57.288 33.333 13.21 0.00 41.40 3.69
545 560 8.563732 GCTTCTCTAACTTTTCTTCTCAATGTT 58.436 33.333 0.00 0.00 0.00 2.71
546 561 7.936301 AGCTTCTCTAACTTTTCTTCTCAATGT 59.064 33.333 0.00 0.00 0.00 2.71
547 562 8.321650 AGCTTCTCTAACTTTTCTTCTCAATG 57.678 34.615 0.00 0.00 0.00 2.82
554 569 9.114952 GGCATTATAGCTTCTCTAACTTTTCTT 57.885 33.333 0.00 0.00 34.17 2.52
555 570 8.490311 AGGCATTATAGCTTCTCTAACTTTTCT 58.510 33.333 0.00 0.00 34.17 2.52
556 571 8.669946 AGGCATTATAGCTTCTCTAACTTTTC 57.330 34.615 0.00 0.00 34.17 2.29
558 573 9.549078 GTTAGGCATTATAGCTTCTCTAACTTT 57.451 33.333 0.00 0.00 35.02 2.66
559 574 8.929487 AGTTAGGCATTATAGCTTCTCTAACTT 58.071 33.333 0.00 0.00 40.08 2.66
560 575 8.485578 AGTTAGGCATTATAGCTTCTCTAACT 57.514 34.615 0.00 0.00 39.17 2.24
561 576 9.549078 AAAGTTAGGCATTATAGCTTCTCTAAC 57.451 33.333 0.00 0.00 36.57 2.34
563 578 9.765795 GAAAAGTTAGGCATTATAGCTTCTCTA 57.234 33.333 0.00 0.00 34.17 2.43
564 579 8.490311 AGAAAAGTTAGGCATTATAGCTTCTCT 58.510 33.333 0.00 0.00 34.17 3.10
565 580 8.669946 AGAAAAGTTAGGCATTATAGCTTCTC 57.330 34.615 0.00 0.00 34.17 2.87
566 581 9.114952 GAAGAAAAGTTAGGCATTATAGCTTCT 57.885 33.333 0.00 0.00 34.17 2.85
567 582 9.114952 AGAAGAAAAGTTAGGCATTATAGCTTC 57.885 33.333 0.00 0.00 34.17 3.86
568 583 9.467796 AAGAAGAAAAGTTAGGCATTATAGCTT 57.532 29.630 0.00 0.00 34.17 3.74
569 584 9.467796 AAAGAAGAAAAGTTAGGCATTATAGCT 57.532 29.630 0.00 0.00 34.17 3.32
570 585 9.723447 GAAAGAAGAAAAGTTAGGCATTATAGC 57.277 33.333 0.00 0.00 0.00 2.97
575 590 9.746457 AGATAGAAAGAAGAAAAGTTAGGCATT 57.254 29.630 0.00 0.00 0.00 3.56
631 646 8.956426 ACACGGTAGATCATCAATTTACAAATT 58.044 29.630 0.00 0.00 39.07 1.82
632 647 8.506168 ACACGGTAGATCATCAATTTACAAAT 57.494 30.769 0.00 0.00 28.67 2.32
633 648 7.915293 ACACGGTAGATCATCAATTTACAAA 57.085 32.000 0.00 0.00 28.67 2.83
634 649 8.035984 TGTACACGGTAGATCATCAATTTACAA 58.964 33.333 0.00 0.00 28.67 2.41
635 650 7.548967 TGTACACGGTAGATCATCAATTTACA 58.451 34.615 0.00 0.00 28.67 2.41
636 651 7.997107 TGTACACGGTAGATCATCAATTTAC 57.003 36.000 0.00 0.00 0.00 2.01
637 652 9.607988 AAATGTACACGGTAGATCATCAATTTA 57.392 29.630 0.00 0.00 0.00 1.40
638 653 8.506168 AAATGTACACGGTAGATCATCAATTT 57.494 30.769 0.00 0.00 0.00 1.82
639 654 9.778741 ATAAATGTACACGGTAGATCATCAATT 57.221 29.630 0.00 0.00 0.00 2.32
641 656 9.908152 CTATAAATGTACACGGTAGATCATCAA 57.092 33.333 0.00 0.00 0.00 2.57
642 657 9.074576 ACTATAAATGTACACGGTAGATCATCA 57.925 33.333 0.00 0.00 0.00 3.07
669 684 9.295825 TCACCATCAGTTTCTTTGTATGTAATT 57.704 29.630 0.00 0.00 0.00 1.40
670 685 8.862325 TCACCATCAGTTTCTTTGTATGTAAT 57.138 30.769 0.00 0.00 0.00 1.89
671 686 8.684386 TTCACCATCAGTTTCTTTGTATGTAA 57.316 30.769 0.00 0.00 0.00 2.41
672 687 8.684386 TTTCACCATCAGTTTCTTTGTATGTA 57.316 30.769 0.00 0.00 0.00 2.29
673 688 7.581213 TTTCACCATCAGTTTCTTTGTATGT 57.419 32.000 0.00 0.00 0.00 2.29
724 739 9.054922 GGTTGTTTACTGTTGGTATTTACTGTA 57.945 33.333 0.00 0.00 0.00 2.74
725 740 7.776500 AGGTTGTTTACTGTTGGTATTTACTGT 59.224 33.333 0.00 0.00 0.00 3.55
726 741 8.073768 CAGGTTGTTTACTGTTGGTATTTACTG 58.926 37.037 0.00 0.00 0.00 2.74
727 742 7.255346 GCAGGTTGTTTACTGTTGGTATTTACT 60.255 37.037 0.00 0.00 37.07 2.24
728 743 6.859508 GCAGGTTGTTTACTGTTGGTATTTAC 59.140 38.462 0.00 0.00 37.07 2.01
729 744 6.773685 AGCAGGTTGTTTACTGTTGGTATTTA 59.226 34.615 0.00 0.00 37.07 1.40
730 745 5.596772 AGCAGGTTGTTTACTGTTGGTATTT 59.403 36.000 0.00 0.00 37.07 1.40
731 746 5.137551 AGCAGGTTGTTTACTGTTGGTATT 58.862 37.500 0.00 0.00 37.07 1.89
732 747 4.725490 AGCAGGTTGTTTACTGTTGGTAT 58.275 39.130 0.00 0.00 37.07 2.73
733 748 4.159244 AGCAGGTTGTTTACTGTTGGTA 57.841 40.909 0.00 0.00 37.07 3.25
734 749 3.012934 AGCAGGTTGTTTACTGTTGGT 57.987 42.857 0.00 0.00 37.07 3.67
735 750 4.578928 AGTTAGCAGGTTGTTTACTGTTGG 59.421 41.667 0.00 0.00 37.07 3.77
736 751 5.751243 AGTTAGCAGGTTGTTTACTGTTG 57.249 39.130 0.00 0.00 37.07 3.33
737 752 7.450903 AGATAGTTAGCAGGTTGTTTACTGTT 58.549 34.615 0.00 0.00 37.07 3.16
738 753 7.005709 AGATAGTTAGCAGGTTGTTTACTGT 57.994 36.000 0.00 0.00 37.07 3.55
739 754 8.251721 AGTAGATAGTTAGCAGGTTGTTTACTG 58.748 37.037 0.00 0.00 37.76 2.74
740 755 8.363761 AGTAGATAGTTAGCAGGTTGTTTACT 57.636 34.615 0.00 0.00 0.00 2.24
743 758 8.591072 TGTTAGTAGATAGTTAGCAGGTTGTTT 58.409 33.333 0.00 0.00 0.00 2.83
744 759 8.130671 TGTTAGTAGATAGTTAGCAGGTTGTT 57.869 34.615 0.00 0.00 0.00 2.83
745 760 7.396623 ACTGTTAGTAGATAGTTAGCAGGTTGT 59.603 37.037 0.00 0.00 0.00 3.32
746 761 7.773149 ACTGTTAGTAGATAGTTAGCAGGTTG 58.227 38.462 0.00 0.00 0.00 3.77
747 762 7.835181 AGACTGTTAGTAGATAGTTAGCAGGTT 59.165 37.037 0.00 0.00 0.00 3.50
748 763 7.348033 AGACTGTTAGTAGATAGTTAGCAGGT 58.652 38.462 0.00 0.00 0.00 4.00
749 764 7.811117 AGACTGTTAGTAGATAGTTAGCAGG 57.189 40.000 0.00 0.00 0.00 4.85
760 775 9.978044 GAAGGAAAGTTAAAGACTGTTAGTAGA 57.022 33.333 0.00 0.00 39.00 2.59
761 776 9.984190 AGAAGGAAAGTTAAAGACTGTTAGTAG 57.016 33.333 0.00 0.00 39.00 2.57
763 778 9.327628 GAAGAAGGAAAGTTAAAGACTGTTAGT 57.672 33.333 0.00 0.00 39.00 2.24
764 779 9.326413 TGAAGAAGGAAAGTTAAAGACTGTTAG 57.674 33.333 0.00 0.00 39.00 2.34
765 780 9.847224 ATGAAGAAGGAAAGTTAAAGACTGTTA 57.153 29.630 0.00 0.00 39.00 2.41
766 781 8.753497 ATGAAGAAGGAAAGTTAAAGACTGTT 57.247 30.769 0.00 0.00 39.00 3.16
767 782 8.753497 AATGAAGAAGGAAAGTTAAAGACTGT 57.247 30.769 0.00 0.00 39.00 3.55
790 805 9.938280 TGCTACAGTGTTTGTCTAGTATAAAAT 57.062 29.630 0.00 0.00 41.29 1.82
791 806 9.199982 GTGCTACAGTGTTTGTCTAGTATAAAA 57.800 33.333 0.00 0.00 41.29 1.52
792 807 7.816031 GGTGCTACAGTGTTTGTCTAGTATAAA 59.184 37.037 0.00 0.00 41.29 1.40
793 808 7.318141 GGTGCTACAGTGTTTGTCTAGTATAA 58.682 38.462 0.00 0.00 41.29 0.98
794 809 6.403964 CGGTGCTACAGTGTTTGTCTAGTATA 60.404 42.308 0.00 0.00 41.29 1.47
795 810 5.621555 CGGTGCTACAGTGTTTGTCTAGTAT 60.622 44.000 0.00 0.00 41.29 2.12
796 811 4.320714 CGGTGCTACAGTGTTTGTCTAGTA 60.321 45.833 0.00 0.00 41.29 1.82
797 812 3.552273 CGGTGCTACAGTGTTTGTCTAGT 60.552 47.826 0.00 0.00 41.29 2.57
798 813 2.987149 CGGTGCTACAGTGTTTGTCTAG 59.013 50.000 0.00 0.00 41.29 2.43
799 814 2.363038 ACGGTGCTACAGTGTTTGTCTA 59.637 45.455 0.00 0.00 41.29 2.59
800 815 1.138266 ACGGTGCTACAGTGTTTGTCT 59.862 47.619 0.00 0.00 41.29 3.41
801 816 1.260561 CACGGTGCTACAGTGTTTGTC 59.739 52.381 0.00 0.00 39.04 3.18
802 817 1.134640 TCACGGTGCTACAGTGTTTGT 60.135 47.619 0.00 0.00 43.28 2.83
803 818 1.260561 GTCACGGTGCTACAGTGTTTG 59.739 52.381 0.00 0.00 43.28 2.93
804 819 1.138266 AGTCACGGTGCTACAGTGTTT 59.862 47.619 0.00 6.29 43.28 2.83
805 820 0.750850 AGTCACGGTGCTACAGTGTT 59.249 50.000 0.00 6.53 43.28 3.32
806 821 0.750850 AAGTCACGGTGCTACAGTGT 59.249 50.000 15.06 0.00 43.28 3.55
807 822 1.792949 GAAAGTCACGGTGCTACAGTG 59.207 52.381 2.51 11.31 43.97 3.66
808 823 1.270147 GGAAAGTCACGGTGCTACAGT 60.270 52.381 2.51 0.00 0.00 3.55
809 824 1.000955 AGGAAAGTCACGGTGCTACAG 59.999 52.381 2.51 0.00 0.00 2.74
810 825 1.045407 AGGAAAGTCACGGTGCTACA 58.955 50.000 2.51 0.00 0.00 2.74
811 826 2.067013 GAAGGAAAGTCACGGTGCTAC 58.933 52.381 2.51 0.00 0.00 3.58
812 827 1.689813 TGAAGGAAAGTCACGGTGCTA 59.310 47.619 2.51 0.00 0.00 3.49
813 828 0.468226 TGAAGGAAAGTCACGGTGCT 59.532 50.000 2.51 1.17 0.00 4.40
814 829 0.586802 GTGAAGGAAAGTCACGGTGC 59.413 55.000 2.51 0.00 36.35 5.01
815 830 1.948104 TGTGAAGGAAAGTCACGGTG 58.052 50.000 0.56 0.56 46.89 4.94
816 831 2.702592 TTGTGAAGGAAAGTCACGGT 57.297 45.000 0.57 0.00 46.89 4.83
817 832 2.878406 ACATTGTGAAGGAAAGTCACGG 59.122 45.455 0.00 0.00 46.89 4.94
818 833 4.552166 AACATTGTGAAGGAAAGTCACG 57.448 40.909 0.00 0.00 46.89 4.35
819 834 6.073003 CCTCTAACATTGTGAAGGAAAGTCAC 60.073 42.308 6.55 0.00 44.67 3.67
820 835 5.997746 CCTCTAACATTGTGAAGGAAAGTCA 59.002 40.000 6.55 0.00 0.00 3.41
821 836 6.231211 TCCTCTAACATTGTGAAGGAAAGTC 58.769 40.000 10.89 0.00 0.00 3.01
822 837 6.187727 TCCTCTAACATTGTGAAGGAAAGT 57.812 37.500 10.89 0.00 0.00 2.66
823 838 6.317391 GGATCCTCTAACATTGTGAAGGAAAG 59.683 42.308 15.19 1.53 0.00 2.62
824 839 6.180472 GGATCCTCTAACATTGTGAAGGAAA 58.820 40.000 15.19 0.13 0.00 3.13
825 840 5.626809 CGGATCCTCTAACATTGTGAAGGAA 60.627 44.000 10.75 4.27 0.00 3.36
826 841 4.141937 CGGATCCTCTAACATTGTGAAGGA 60.142 45.833 10.75 14.12 0.00 3.36
827 842 4.122776 CGGATCCTCTAACATTGTGAAGG 58.877 47.826 10.75 6.18 0.00 3.46
828 843 4.122776 CCGGATCCTCTAACATTGTGAAG 58.877 47.826 10.75 0.00 0.00 3.02
829 844 3.517901 ACCGGATCCTCTAACATTGTGAA 59.482 43.478 9.46 0.00 0.00 3.18
830 845 3.104512 ACCGGATCCTCTAACATTGTGA 58.895 45.455 9.46 0.00 0.00 3.58
831 846 3.543680 ACCGGATCCTCTAACATTGTG 57.456 47.619 9.46 0.00 0.00 3.33
832 847 3.118371 GGAACCGGATCCTCTAACATTGT 60.118 47.826 22.87 0.00 36.50 2.71
833 848 3.467803 GGAACCGGATCCTCTAACATTG 58.532 50.000 22.87 0.00 36.50 2.82
834 849 2.102588 CGGAACCGGATCCTCTAACATT 59.897 50.000 26.42 0.00 37.34 2.71
835 850 1.687123 CGGAACCGGATCCTCTAACAT 59.313 52.381 26.42 0.00 37.34 2.71
836 851 1.108776 CGGAACCGGATCCTCTAACA 58.891 55.000 26.42 0.00 37.34 2.41
837 852 1.109609 ACGGAACCGGATCCTCTAAC 58.890 55.000 26.42 1.47 44.69 2.34
838 853 1.856629 AACGGAACCGGATCCTCTAA 58.143 50.000 26.42 0.00 44.69 2.10
839 854 1.856629 AAACGGAACCGGATCCTCTA 58.143 50.000 26.42 0.00 44.69 2.43
840 855 0.981943 AAAACGGAACCGGATCCTCT 59.018 50.000 26.42 11.84 44.69 3.69
841 856 1.817357 AAAAACGGAACCGGATCCTC 58.183 50.000 26.42 8.84 44.69 3.71
877 892 4.599241 TCTCCCCTCATCTTCAGTCTTTTT 59.401 41.667 0.00 0.00 0.00 1.94
878 893 4.171234 TCTCCCCTCATCTTCAGTCTTTT 58.829 43.478 0.00 0.00 0.00 2.27
879 894 3.796111 TCTCCCCTCATCTTCAGTCTTT 58.204 45.455 0.00 0.00 0.00 2.52
880 895 3.481559 TCTCCCCTCATCTTCAGTCTT 57.518 47.619 0.00 0.00 0.00 3.01
881 896 3.481559 TTCTCCCCTCATCTTCAGTCT 57.518 47.619 0.00 0.00 0.00 3.24
882 897 4.559862 TTTTCTCCCCTCATCTTCAGTC 57.440 45.455 0.00 0.00 0.00 3.51
883 898 4.853007 CATTTTCTCCCCTCATCTTCAGT 58.147 43.478 0.00 0.00 0.00 3.41
884 899 3.631227 GCATTTTCTCCCCTCATCTTCAG 59.369 47.826 0.00 0.00 0.00 3.02
885 900 3.624777 GCATTTTCTCCCCTCATCTTCA 58.375 45.455 0.00 0.00 0.00 3.02
886 901 2.615912 CGCATTTTCTCCCCTCATCTTC 59.384 50.000 0.00 0.00 0.00 2.87
887 902 2.025887 ACGCATTTTCTCCCCTCATCTT 60.026 45.455 0.00 0.00 0.00 2.40
888 903 1.561542 ACGCATTTTCTCCCCTCATCT 59.438 47.619 0.00 0.00 0.00 2.90
889 904 1.943340 GACGCATTTTCTCCCCTCATC 59.057 52.381 0.00 0.00 0.00 2.92
890 905 1.743772 CGACGCATTTTCTCCCCTCAT 60.744 52.381 0.00 0.00 0.00 2.90
891 906 0.391130 CGACGCATTTTCTCCCCTCA 60.391 55.000 0.00 0.00 0.00 3.86
892 907 1.090052 CCGACGCATTTTCTCCCCTC 61.090 60.000 0.00 0.00 0.00 4.30
893 908 1.078426 CCGACGCATTTTCTCCCCT 60.078 57.895 0.00 0.00 0.00 4.79
894 909 2.761195 GCCGACGCATTTTCTCCCC 61.761 63.158 0.00 0.00 34.03 4.81
895 910 2.038269 TGCCGACGCATTTTCTCCC 61.038 57.895 0.00 0.00 41.12 4.30
896 911 3.573558 TGCCGACGCATTTTCTCC 58.426 55.556 0.00 0.00 41.12 3.71
905 920 2.126888 CCAACAACATGCCGACGC 60.127 61.111 0.00 0.00 0.00 5.19
906 921 1.227999 ACTCCAACAACATGCCGACG 61.228 55.000 0.00 0.00 0.00 5.12
907 922 0.951558 AACTCCAACAACATGCCGAC 59.048 50.000 0.00 0.00 0.00 4.79
908 923 1.234821 GAACTCCAACAACATGCCGA 58.765 50.000 0.00 0.00 0.00 5.54
909 924 0.240945 GGAACTCCAACAACATGCCG 59.759 55.000 0.00 0.00 35.64 5.69
910 925 1.327303 TGGAACTCCAACAACATGCC 58.673 50.000 0.00 0.00 44.35 4.40
930 945 1.645034 ACAGAGAAATCCACGCATCG 58.355 50.000 0.00 0.00 0.00 3.84
947 962 1.611261 CCCAGTCGGTAGGGGAACA 60.611 63.158 0.00 0.00 45.08 3.18
962 977 0.607217 TTCGCTGTCTAGACGTCCCA 60.607 55.000 17.85 3.33 0.00 4.37
992 1007 9.178758 TCTTCTTTATTATTGCCCTTCTCTTTC 57.821 33.333 0.00 0.00 0.00 2.62
1165 1180 0.681243 GGATGACCTTGGAGTTGGCC 60.681 60.000 0.00 0.00 0.00 5.36
1298 1313 1.668826 ACAGACTCCCAAGGGCAATA 58.331 50.000 0.00 0.00 34.68 1.90
1384 1399 4.032786 CGAATCGACACAACATTGCAGATA 59.967 41.667 0.00 0.00 0.00 1.98
1408 1423 4.097437 CAGCATCTTACTTGCATCACCAAT 59.903 41.667 0.00 0.00 42.62 3.16
1497 1513 4.698780 TGCAAATCAGACAAGAGATGGAAG 59.301 41.667 0.00 0.00 0.00 3.46
1595 1611 2.118313 TGTCATGTCCAGAAGGCATG 57.882 50.000 0.85 0.85 44.13 4.06
1651 1667 4.436079 ACTAGTCCCTACATTTCCAACCT 58.564 43.478 0.00 0.00 0.00 3.50
1679 1695 0.550914 TCAAAGCTCACACTTGGGGT 59.449 50.000 0.00 0.00 34.47 4.95
1680 1696 0.954452 GTCAAAGCTCACACTTGGGG 59.046 55.000 0.00 0.00 0.00 4.96
1707 1723 6.745450 ACTGTTAACAAAACATTGTTCACGAG 59.255 34.615 10.03 11.17 43.40 4.18
1908 1924 5.789643 AGCGGCAACAATTAATATGGATT 57.210 34.783 1.45 0.00 0.00 3.01
1923 1939 6.875195 AGTATAAAGTTGTACTAAAGCGGCAA 59.125 34.615 1.45 0.00 34.01 4.52
1924 1940 6.400568 AGTATAAAGTTGTACTAAAGCGGCA 58.599 36.000 1.45 0.00 34.01 5.69
1978 1994 5.360429 GGAAATATAGTACTCCCTCCGATCC 59.640 48.000 0.00 0.00 0.00 3.36
2035 2051 2.955660 GGCTAGACACATGCTCTCTAGT 59.044 50.000 17.15 0.00 37.09 2.57
2290 2346 6.347696 TCTGCAACAACAAAAATGAAGGATT 58.652 32.000 0.00 0.00 0.00 3.01
2393 2449 7.390027 GGTCTAGATGATACCTGCATAACATT 58.610 38.462 0.00 0.00 0.00 2.71
2403 2459 5.681494 TTACCAGGGTCTAGATGATACCT 57.319 43.478 0.00 0.00 35.98 3.08
2404 2460 6.257586 AGATTACCAGGGTCTAGATGATACC 58.742 44.000 0.00 0.00 0.00 2.73
2405 2461 7.233757 ACAAGATTACCAGGGTCTAGATGATAC 59.766 40.741 0.00 0.00 0.00 2.24
2406 2462 7.306013 ACAAGATTACCAGGGTCTAGATGATA 58.694 38.462 0.00 0.00 0.00 2.15
2407 2463 6.146760 ACAAGATTACCAGGGTCTAGATGAT 58.853 40.000 0.00 0.00 0.00 2.45
2408 2464 5.529289 ACAAGATTACCAGGGTCTAGATGA 58.471 41.667 0.00 0.00 0.00 2.92
2409 2465 5.878406 ACAAGATTACCAGGGTCTAGATG 57.122 43.478 0.00 0.00 0.00 2.90
2410 2466 5.726793 ACAACAAGATTACCAGGGTCTAGAT 59.273 40.000 0.00 0.00 0.00 1.98
2411 2467 5.091552 ACAACAAGATTACCAGGGTCTAGA 58.908 41.667 0.00 0.00 0.00 2.43
2412 2468 5.422214 ACAACAAGATTACCAGGGTCTAG 57.578 43.478 0.00 0.00 0.00 2.43
2413 2469 5.556915 CAACAACAAGATTACCAGGGTCTA 58.443 41.667 0.00 0.00 0.00 2.59
2414 2470 4.398319 CAACAACAAGATTACCAGGGTCT 58.602 43.478 0.00 0.00 0.00 3.85
2415 2471 3.057526 GCAACAACAAGATTACCAGGGTC 60.058 47.826 0.00 0.00 0.00 4.46
2428 2484 9.897744 TTTTTCAACAAAATTATGCAACAACAA 57.102 22.222 0.00 0.00 31.39 2.83
2473 2529 4.630644 AGTAGGATCCACAGCCAATATG 57.369 45.455 15.82 0.00 0.00 1.78
2474 2530 4.780021 CCTAGTAGGATCCACAGCCAATAT 59.220 45.833 15.82 0.00 37.67 1.28
2517 2575 8.867097 AGCATCAAAATCCTATTATTGCATCTT 58.133 29.630 0.00 0.00 0.00 2.40
2535 2593 8.441311 AGGATCCTAGTATATTCAGCATCAAA 57.559 34.615 14.27 0.00 0.00 2.69
2611 2669 3.763897 GGTAGGAAGAAACACCATGCATT 59.236 43.478 0.00 0.00 0.00 3.56
2642 2700 9.528018 TCAATTTAAAATTTTCAGTGGACAGAC 57.472 29.630 6.72 0.00 0.00 3.51
2680 2738 3.796844 GCAAGGCAGAAGAAAACAGAACC 60.797 47.826 0.00 0.00 0.00 3.62
2709 2767 1.925415 TTGCATCGCACAGTCATGCC 61.925 55.000 6.29 0.00 42.99 4.40
2717 2775 2.330440 ATATCCTGTTGCATCGCACA 57.670 45.000 0.00 0.00 38.71 4.57
2750 2808 3.287222 GCAGGTAAATCATGGGCTAACA 58.713 45.455 0.00 0.00 0.00 2.41
2787 2845 7.918033 CGGGCATGATTTATAAACATTTACACA 59.082 33.333 0.00 0.00 0.00 3.72
2851 2909 9.893305 GTTTTCTTTGCTAAGCTAATAAGTTCA 57.107 29.630 2.75 0.00 0.00 3.18
2892 2952 4.827284 ACTGTCCCACCTTTTATTGACTTG 59.173 41.667 0.00 0.00 0.00 3.16
3093 3158 0.895100 AAAGCATGAAAGCCCTGCGA 60.895 50.000 0.00 0.00 40.78 5.10
3106 3174 1.327303 TGCAACCCGAAGAAAAGCAT 58.673 45.000 0.00 0.00 0.00 3.79
3182 3250 1.538075 GAGCAGGTACTAGATCTCCGC 59.462 57.143 0.00 2.93 36.02 5.54
3187 3255 3.486383 AGAGCAGAGCAGGTACTAGATC 58.514 50.000 0.00 0.00 36.02 2.75
3195 3263 1.271271 CCTTGAAAGAGCAGAGCAGGT 60.271 52.381 0.00 0.00 0.00 4.00
3282 3350 3.810310 AGCCAATTTCAAACGGTCAAA 57.190 38.095 0.00 0.00 0.00 2.69
3291 3359 7.722949 AGATTATCTTCCAAGCCAATTTCAA 57.277 32.000 0.00 0.00 0.00 2.69
3653 3721 8.044309 TCATTCGGAACATAGAAATCAAAGGTA 58.956 33.333 0.00 0.00 0.00 3.08
3659 3727 6.538742 GGTTCTCATTCGGAACATAGAAATCA 59.461 38.462 10.88 0.00 43.20 2.57
3706 3774 3.994392 GCGATAAAGGAACACAACAGAGA 59.006 43.478 0.00 0.00 0.00 3.10
3799 3867 7.324856 TCAAAAATCGAATTACATGAAACACCG 59.675 33.333 0.00 0.00 0.00 4.94
3823 3891 2.627699 GCCACCTCCTGAACAAAATTCA 59.372 45.455 0.00 0.00 0.00 2.57
3836 3904 1.377725 CCACATGTCTGCCACCTCC 60.378 63.158 0.00 0.00 0.00 4.30
3854 3922 8.937634 AAAATATGATTTCAAGAATCTGGCAC 57.062 30.769 0.00 0.00 0.00 5.01
3921 3990 6.542370 GCAGCTGGATATAACTAAGAAAACCA 59.458 38.462 17.12 0.00 0.00 3.67
3923 3992 6.017026 GGGCAGCTGGATATAACTAAGAAAAC 60.017 42.308 17.12 0.00 0.00 2.43
3930 3999 3.275848 AGGGGCAGCTGGATATAACTA 57.724 47.619 17.12 0.00 0.00 2.24
3961 4030 5.046304 TGAGAAAACCCCTCTAGAGACATTG 60.046 44.000 21.76 3.66 0.00 2.82
3969 4038 2.166664 CTCCGTGAGAAAACCCCTCTAG 59.833 54.545 0.00 0.00 0.00 2.43
3971 4040 0.977395 CTCCGTGAGAAAACCCCTCT 59.023 55.000 0.00 0.00 0.00 3.69
3972 4041 0.036294 CCTCCGTGAGAAAACCCCTC 60.036 60.000 2.84 0.00 0.00 4.30
3973 4042 1.489560 CCCTCCGTGAGAAAACCCCT 61.490 60.000 2.84 0.00 0.00 4.79
3974 4043 1.002502 CCCTCCGTGAGAAAACCCC 60.003 63.158 2.84 0.00 0.00 4.95
3975 4044 0.978907 TACCCTCCGTGAGAAAACCC 59.021 55.000 2.84 0.00 0.00 4.11
3976 4045 2.224354 TGTTACCCTCCGTGAGAAAACC 60.224 50.000 2.84 0.00 0.00 3.27
3977 4046 3.116079 TGTTACCCTCCGTGAGAAAAC 57.884 47.619 2.84 4.96 0.00 2.43
3978 4047 3.670625 CATGTTACCCTCCGTGAGAAAA 58.329 45.455 2.84 0.00 0.00 2.29
3979 4048 2.614481 GCATGTTACCCTCCGTGAGAAA 60.614 50.000 0.00 0.00 0.00 2.52
3980 4049 1.066430 GCATGTTACCCTCCGTGAGAA 60.066 52.381 0.00 0.00 0.00 2.87
3981 4050 0.535335 GCATGTTACCCTCCGTGAGA 59.465 55.000 0.00 0.00 0.00 3.27
3982 4051 0.806102 CGCATGTTACCCTCCGTGAG 60.806 60.000 0.00 0.00 0.00 3.51
3983 4052 1.216977 CGCATGTTACCCTCCGTGA 59.783 57.895 0.00 0.00 0.00 4.35
3984 4053 0.179084 ATCGCATGTTACCCTCCGTG 60.179 55.000 0.00 0.00 0.00 4.94
3985 4054 0.104304 GATCGCATGTTACCCTCCGT 59.896 55.000 0.00 0.00 0.00 4.69
3986 4055 0.104120 TGATCGCATGTTACCCTCCG 59.896 55.000 0.00 0.00 0.00 4.63
3995 4064 1.270826 CTCCGTATCCTGATCGCATGT 59.729 52.381 0.00 0.00 0.00 3.21
4039 4114 9.970395 CTGCTTATTTAATTGATGAGGCAAATA 57.030 29.630 0.00 0.00 0.00 1.40
4052 4127 7.148000 GGGCAACTCTCTTCTGCTTATTTAATT 60.148 37.037 0.00 0.00 36.32 1.40
4079 4154 2.404186 GCCCGGTTTCCGCTAAAGG 61.404 63.158 0.00 0.00 46.86 3.11
4080 4155 2.746803 CGCCCGGTTTCCGCTAAAG 61.747 63.158 0.00 0.00 46.86 1.85
4083 4158 2.728443 TTTTCGCCCGGTTTCCGCTA 62.728 55.000 0.00 0.00 46.86 4.26
4085 4160 2.860690 GATTTTCGCCCGGTTTCCGC 62.861 60.000 0.00 0.00 46.86 5.54
4087 4162 0.815095 ATGATTTTCGCCCGGTTTCC 59.185 50.000 0.00 0.00 0.00 3.13
4114 4193 2.441410 TCTTGTGTTTGCCACTCAACA 58.559 42.857 0.00 0.00 44.81 3.33
4126 4207 2.489971 CGTGTGTGGGTATCTTGTGTT 58.510 47.619 0.00 0.00 0.00 3.32
4158 4241 1.412710 GTATTGTCTCGATGAGGCCCA 59.587 52.381 0.00 0.00 32.68 5.36
4203 4286 1.283905 TGACGATGACACCTCTAGGGA 59.716 52.381 0.20 0.00 40.27 4.20
4221 4304 2.611971 CGTTTCTCGGAGTTTGGGATGA 60.612 50.000 4.69 0.00 35.71 2.92
4248 4333 6.456447 TCGACGATCGTCTTTAACAAATTT 57.544 33.333 37.12 5.76 42.54 1.82
4250 4335 5.164022 GGTTCGACGATCGTCTTTAACAAAT 60.164 40.000 37.12 6.42 42.54 2.32
4256 4341 3.236816 GTTGGTTCGACGATCGTCTTTA 58.763 45.455 37.12 23.58 42.54 1.85
4298 4383 3.555547 CACGTCATTTTCAGTGTCAGTCA 59.444 43.478 0.00 0.00 0.00 3.41
4301 4386 4.033932 TCAACACGTCATTTTCAGTGTCAG 59.966 41.667 0.43 0.00 45.74 3.51
4307 4392 3.155998 GCGATCAACACGTCATTTTCAG 58.844 45.455 0.00 0.00 0.00 3.02
4308 4393 2.095969 GGCGATCAACACGTCATTTTCA 60.096 45.455 0.00 0.00 35.39 2.69
4309 4394 2.095969 TGGCGATCAACACGTCATTTTC 60.096 45.455 0.00 0.00 40.34 2.29
4313 4398 1.196808 GTTTGGCGATCAACACGTCAT 59.803 47.619 0.00 0.00 44.39 3.06
4314 4399 0.584396 GTTTGGCGATCAACACGTCA 59.416 50.000 0.00 0.00 43.38 4.35
4315 4400 0.110373 GGTTTGGCGATCAACACGTC 60.110 55.000 0.00 0.00 34.67 4.34
4317 4402 0.165944 GAGGTTTGGCGATCAACACG 59.834 55.000 0.00 0.00 34.67 4.49
4318 4403 1.197721 CTGAGGTTTGGCGATCAACAC 59.802 52.381 0.00 0.00 34.67 3.32
4319 4404 1.522668 CTGAGGTTTGGCGATCAACA 58.477 50.000 0.00 0.00 34.67 3.33
4320 4405 0.169009 GCTGAGGTTTGGCGATCAAC 59.831 55.000 0.00 0.00 34.67 3.18
4321 4406 0.960364 GGCTGAGGTTTGGCGATCAA 60.960 55.000 0.00 0.00 0.00 2.57
4322 4407 1.377202 GGCTGAGGTTTGGCGATCA 60.377 57.895 0.00 0.00 0.00 2.92
4323 4408 1.377202 TGGCTGAGGTTTGGCGATC 60.377 57.895 0.00 0.00 0.00 3.69
4324 4409 1.675641 GTGGCTGAGGTTTGGCGAT 60.676 57.895 0.00 0.00 0.00 4.58
4325 4410 2.281484 GTGGCTGAGGTTTGGCGA 60.281 61.111 0.00 0.00 0.00 5.54
4369 4456 0.169672 CCTTCGTAGCTTTCCGTCGA 59.830 55.000 0.00 0.00 0.00 4.20
4405 4492 2.158959 GGTGATCTTCCACGACGCG 61.159 63.158 3.53 3.53 37.91 6.01
4468 4555 1.905637 TGAGGTCGAAGCTACAGTGA 58.094 50.000 0.00 0.00 0.00 3.41
4472 4559 2.176045 TGGATTGAGGTCGAAGCTACA 58.824 47.619 0.00 0.00 0.00 2.74
4474 4561 2.565391 TGTTGGATTGAGGTCGAAGCTA 59.435 45.455 0.00 0.00 0.00 3.32
4484 4571 2.886523 TCAGCTGGTTTGTTGGATTGAG 59.113 45.455 15.13 0.00 0.00 3.02
4489 4576 0.823356 GCCTCAGCTGGTTTGTTGGA 60.823 55.000 15.13 0.00 35.50 3.53
4490 4577 1.662044 GCCTCAGCTGGTTTGTTGG 59.338 57.895 15.13 6.29 35.50 3.77
4515 4603 1.436600 CTCTTCTGCAGCATGTTCGT 58.563 50.000 9.47 0.00 39.31 3.85
4516 4604 0.096628 GCTCTTCTGCAGCATGTTCG 59.903 55.000 9.47 0.00 39.31 3.95
4517 4605 0.450983 GGCTCTTCTGCAGCATGTTC 59.549 55.000 9.47 0.00 38.77 3.18
4518 4606 1.303799 CGGCTCTTCTGCAGCATGTT 61.304 55.000 9.47 0.00 38.77 2.71
4519 4607 1.744368 CGGCTCTTCTGCAGCATGT 60.744 57.895 9.47 0.00 38.77 3.21
4520 4608 1.449070 TCGGCTCTTCTGCAGCATG 60.449 57.895 9.47 1.25 38.77 4.06
4521 4609 1.449246 GTCGGCTCTTCTGCAGCAT 60.449 57.895 9.47 0.00 38.77 3.79
4522 4610 2.047844 GTCGGCTCTTCTGCAGCA 60.048 61.111 9.47 0.00 38.77 4.41
4523 4611 2.817396 GGTCGGCTCTTCTGCAGC 60.817 66.667 9.47 0.00 36.02 5.25
4524 4612 1.739562 GTGGTCGGCTCTTCTGCAG 60.740 63.158 7.63 7.63 34.04 4.41
4525 4613 2.343758 GTGGTCGGCTCTTCTGCA 59.656 61.111 0.00 0.00 34.04 4.41
4526 4614 2.435059 GGTGGTCGGCTCTTCTGC 60.435 66.667 0.00 0.00 0.00 4.26
4527 4615 1.216710 GAGGTGGTCGGCTCTTCTG 59.783 63.158 0.00 0.00 0.00 3.02
4528 4616 0.832135 TTGAGGTGGTCGGCTCTTCT 60.832 55.000 0.00 0.00 0.00 2.85
4529 4617 0.670854 GTTGAGGTGGTCGGCTCTTC 60.671 60.000 0.00 0.00 0.00 2.87
4530 4618 1.371558 GTTGAGGTGGTCGGCTCTT 59.628 57.895 0.00 0.00 0.00 2.85
4531 4619 2.584391 GGTTGAGGTGGTCGGCTCT 61.584 63.158 0.00 0.00 0.00 4.09
4532 4620 2.047179 GGTTGAGGTGGTCGGCTC 60.047 66.667 0.00 0.00 0.00 4.70
4533 4621 1.990160 TTTGGTTGAGGTGGTCGGCT 61.990 55.000 0.00 0.00 0.00 5.52
4534 4622 1.515521 CTTTGGTTGAGGTGGTCGGC 61.516 60.000 0.00 0.00 0.00 5.54
4535 4623 1.515521 GCTTTGGTTGAGGTGGTCGG 61.516 60.000 0.00 0.00 0.00 4.79
4536 4624 1.515521 GGCTTTGGTTGAGGTGGTCG 61.516 60.000 0.00 0.00 0.00 4.79
4537 4625 1.515521 CGGCTTTGGTTGAGGTGGTC 61.516 60.000 0.00 0.00 0.00 4.02
4538 4626 1.528309 CGGCTTTGGTTGAGGTGGT 60.528 57.895 0.00 0.00 0.00 4.16
4539 4627 2.919494 GCGGCTTTGGTTGAGGTGG 61.919 63.158 0.00 0.00 0.00 4.61
4540 4628 2.644992 GCGGCTTTGGTTGAGGTG 59.355 61.111 0.00 0.00 0.00 4.00
4583 4697 1.133790 CTAAGGCTTCTGTGGCAATGC 59.866 52.381 1.30 0.00 34.73 3.56
4601 4716 0.613260 AGGTGATGAAGTTGGCGCTA 59.387 50.000 7.64 0.00 0.00 4.26
4648 4767 2.301870 TCGAGGGCTTCATGTTTGTAGT 59.698 45.455 0.00 0.00 0.00 2.73
4674 4793 0.389426 GGTGTTGTGGCGTCGTATCT 60.389 55.000 0.00 0.00 0.00 1.98
4686 4813 1.745115 CGGATGATGGCGGTGTTGT 60.745 57.895 0.00 0.00 0.00 3.32
4687 4814 1.449423 TCGGATGATGGCGGTGTTG 60.449 57.895 0.00 0.00 0.00 3.33
4688 4815 1.449601 GTCGGATGATGGCGGTGTT 60.450 57.895 0.00 0.00 0.00 3.32
4689 4816 2.186903 GTCGGATGATGGCGGTGT 59.813 61.111 0.00 0.00 0.00 4.16
4690 4817 2.588877 GGTCGGATGATGGCGGTG 60.589 66.667 0.00 0.00 0.00 4.94
4691 4818 4.221422 CGGTCGGATGATGGCGGT 62.221 66.667 0.00 0.00 0.00 5.68
4693 4820 4.592192 AGCGGTCGGATGATGGCG 62.592 66.667 0.00 0.00 32.39 5.69
4706 4833 1.915078 AAACCCCAGATCCTGAGCGG 61.915 60.000 0.00 0.00 32.44 5.52
4743 4870 3.585990 CATGTTGGATCCGGCCGC 61.586 66.667 22.85 6.58 0.00 6.53
4827 4954 2.203480 GTGGGCCTTTGACCAGCA 60.203 61.111 4.53 0.00 37.45 4.41
4845 4972 1.070289 GGTGAAAACCCTGTCTCGTCT 59.930 52.381 0.00 0.00 0.00 4.18
4848 4976 3.326747 CTTAGGTGAAAACCCTGTCTCG 58.673 50.000 0.00 0.00 33.35 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.