Multiple sequence alignment - TraesCS5B01G111700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G111700 chr5B 100.000 4922 0 0 1 4922 167289746 167294667 0.000000e+00 9090.0
1 TraesCS5B01G111700 chr5B 88.421 95 11 0 4828 4922 692775448 692775354 1.120000e-21 115.0
2 TraesCS5B01G111700 chr5B 89.011 91 10 0 4832 4922 517208050 517207960 4.030000e-21 113.0
3 TraesCS5B01G111700 chr5B 95.161 62 2 1 1571 1632 167291251 167291311 4.060000e-16 97.1
4 TraesCS5B01G111700 chr5B 95.161 62 2 1 1506 1566 167291316 167291377 4.060000e-16 97.1
5 TraesCS5B01G111700 chr5D 95.577 2668 61 18 392 3021 178554865 178552217 0.000000e+00 4220.0
6 TraesCS5B01G111700 chr5D 94.556 1598 62 11 3021 4618 178552181 178550609 0.000000e+00 2446.0
7 TraesCS5B01G111700 chr5D 93.939 66 3 1 1571 1636 178553742 178553678 1.130000e-16 99.0
8 TraesCS5B01G111700 chr5D 91.045 67 5 1 1504 1569 178553679 178553613 6.790000e-14 89.8
9 TraesCS5B01G111700 chr5D 92.188 64 3 2 328 391 178554893 178554832 6.790000e-14 89.8
10 TraesCS5B01G111700 chr5A 95.781 1351 40 5 3021 4370 188994217 188995551 0.000000e+00 2163.0
11 TraesCS5B01G111700 chr5A 96.878 1153 31 4 392 1543 188991117 188992265 0.000000e+00 1925.0
12 TraesCS5B01G111700 chr5A 98.284 816 14 0 2207 3022 188993367 188994182 0.000000e+00 1430.0
13 TraesCS5B01G111700 chr5A 97.936 533 9 2 1534 2065 188992416 188992947 0.000000e+00 922.0
14 TraesCS5B01G111700 chr5A 86.905 252 17 6 4481 4724 188996179 188996422 8.120000e-68 268.0
15 TraesCS5B01G111700 chr5A 87.069 116 10 4 4281 4395 563357352 563357463 5.170000e-25 126.0
16 TraesCS5B01G111700 chr5A 89.247 93 10 0 4830 4922 644903585 644903677 3.110000e-22 117.0
17 TraesCS5B01G111700 chr5A 96.875 64 1 1 1504 1566 188992451 188992514 6.740000e-19 106.0
18 TraesCS5B01G111700 chr5A 92.308 65 4 1 328 392 188991088 188991151 1.890000e-14 91.6
19 TraesCS5B01G111700 chr5A 94.872 39 1 1 1571 1609 188992228 188992265 5.320000e-05 60.2
20 TraesCS5B01G111700 chr7D 78.223 349 57 12 4289 4631 16320019 16319684 6.460000e-49 206.0
21 TraesCS5B01G111700 chr3B 89.583 96 10 0 4827 4922 521701700 521701605 6.690000e-24 122.0
22 TraesCS5B01G111700 chr3A 89.362 94 10 0 4829 4922 727293776 727293683 8.650000e-23 119.0
23 TraesCS5B01G111700 chr3A 100.000 28 0 0 4289 4316 487574302 487574329 9.000000e-03 52.8
24 TraesCS5B01G111700 chr2B 89.247 93 10 0 4830 4922 633638451 633638543 3.110000e-22 117.0
25 TraesCS5B01G111700 chr6A 89.011 91 10 0 4832 4922 13376806 13376716 4.030000e-21 113.0
26 TraesCS5B01G111700 chr4B 89.011 91 10 0 4832 4922 37402789 37402699 4.030000e-21 113.0
27 TraesCS5B01G111700 chr4B 82.353 119 13 8 4653 4764 4568921 4569038 4.060000e-16 97.1
28 TraesCS5B01G111700 chr4B 77.931 145 28 4 96 238 613383276 613383134 2.440000e-13 87.9
29 TraesCS5B01G111700 chr4B 79.675 123 13 7 996 1118 113383752 113383642 1.470000e-10 78.7
30 TraesCS5B01G111700 chr1B 88.298 94 11 0 4827 4920 582155196 582155289 4.030000e-21 113.0
31 TraesCS5B01G111700 chr1B 80.769 130 18 7 110 238 559948664 559948541 1.460000e-15 95.3
32 TraesCS5B01G111700 chr1B 85.393 89 11 1 4291 4379 618875623 618875537 1.890000e-14 91.6
33 TraesCS5B01G111700 chr1A 80.769 130 17 7 110 238 235834203 235834081 1.460000e-15 95.3
34 TraesCS5B01G111700 chr4D 80.488 123 12 7 996 1118 80885886 80885776 3.160000e-12 84.2
35 TraesCS5B01G111700 chr4D 100.000 29 0 0 210 238 317188804 317188776 2.000000e-03 54.7
36 TraesCS5B01G111700 chr4A 80.488 123 12 7 996 1118 490360728 490360618 3.160000e-12 84.2
37 TraesCS5B01G111700 chr3D 78.676 136 22 7 104 238 226699994 226700123 3.160000e-12 84.2
38 TraesCS5B01G111700 chr6B 83.333 60 10 0 5 64 134895235 134895294 6.880000e-04 56.5
39 TraesCS5B01G111700 chr2D 100.000 28 0 0 211 238 268727638 268727665 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G111700 chr5B 167289746 167294667 4921 False 3094.733333 9090 96.774000 1 4922 3 chr5B.!!$F1 4921
1 TraesCS5B01G111700 chr5D 178550609 178554893 4284 True 1388.920000 4220 93.461000 328 4618 5 chr5D.!!$R1 4290
2 TraesCS5B01G111700 chr5A 188991088 188996422 5334 False 870.725000 2163 94.979875 328 4724 8 chr5A.!!$F3 4396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
317 318 0.031857 CATTTGGCGCAACTGGTCAA 59.968 50.000 10.83 0.0 0.00 3.18 F
318 319 0.031994 ATTTGGCGCAACTGGTCAAC 59.968 50.000 10.83 0.0 0.00 3.18 F
444 445 0.036010 AGGCCACAATCCGAAGACAG 60.036 55.000 5.01 0.0 0.00 3.51 F
473 474 0.101579 GAAAAACCCACCACCACACG 59.898 55.000 0.00 0.0 0.00 4.49 F
927 934 0.242286 CTGACTGACTGACCGACTGG 59.758 60.000 0.00 0.0 42.84 4.00 F
2196 2675 1.484240 AGAGTTATCCCAGCTCACTGC 59.516 52.381 0.00 0.0 43.02 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 2295 0.179020 CCCCCAGCGATGCTATTTGA 60.179 55.000 0.00 0.0 36.40 2.69 R
2125 2321 4.204799 GGTTATTCAAGATACACCCCACC 58.795 47.826 0.00 0.0 0.00 4.61 R
2348 2827 0.455815 GGCGCCCTTCATTTAGTTGG 59.544 55.000 18.11 0.0 0.00 3.77 R
2602 3081 5.862924 TTCAGCACTAAGAATACACAAGC 57.137 39.130 0.00 0.0 0.00 4.01 R
2611 3090 5.586243 GGTATCAGCAATTCAGCACTAAGAA 59.414 40.000 0.00 0.0 36.85 2.52 R
4042 4558 0.320683 CACCAGGCAGTTCGATCACA 60.321 55.000 0.00 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.395707 TGAAAAATGCAAATATTTTCAACATGC 57.604 25.926 20.92 2.21 45.14 4.06
33 34 9.615295 GAAAAATGCAAATATTTTCAACATGCT 57.385 25.926 17.94 0.00 40.83 3.79
34 35 9.615295 AAAAATGCAAATATTTTCAACATGCTC 57.385 25.926 4.62 0.00 38.83 4.26
35 36 7.908827 AATGCAAATATTTTCAACATGCTCA 57.091 28.000 4.62 0.00 33.66 4.26
36 37 8.500753 AATGCAAATATTTTCAACATGCTCAT 57.499 26.923 4.62 0.00 33.66 2.90
37 38 7.297229 TGCAAATATTTTCAACATGCTCATG 57.703 32.000 8.21 8.21 44.15 3.07
38 39 6.314152 TGCAAATATTTTCAACATGCTCATGG 59.686 34.615 13.69 0.00 42.91 3.66
39 40 6.314400 GCAAATATTTTCAACATGCTCATGGT 59.686 34.615 13.69 4.71 42.91 3.55
40 41 7.492020 GCAAATATTTTCAACATGCTCATGGTA 59.508 33.333 13.69 0.00 42.91 3.25
41 42 9.537192 CAAATATTTTCAACATGCTCATGGTAT 57.463 29.630 13.69 1.36 42.91 2.73
42 43 9.754382 AAATATTTTCAACATGCTCATGGTATC 57.246 29.630 13.69 0.00 42.91 2.24
43 44 6.778834 ATTTTCAACATGCTCATGGTATCA 57.221 33.333 13.69 0.00 42.91 2.15
44 45 6.587206 TTTTCAACATGCTCATGGTATCAA 57.413 33.333 13.69 0.00 42.91 2.57
45 46 6.587206 TTTCAACATGCTCATGGTATCAAA 57.413 33.333 13.69 5.19 42.91 2.69
46 47 6.778834 TTCAACATGCTCATGGTATCAAAT 57.221 33.333 13.69 0.00 42.91 2.32
47 48 6.381481 TCAACATGCTCATGGTATCAAATC 57.619 37.500 13.69 0.00 42.91 2.17
48 49 5.007921 TCAACATGCTCATGGTATCAAATCG 59.992 40.000 13.69 0.00 42.91 3.34
49 50 3.251729 ACATGCTCATGGTATCAAATCGC 59.748 43.478 13.69 0.00 42.91 4.58
50 51 2.916640 TGCTCATGGTATCAAATCGCA 58.083 42.857 0.00 0.00 0.00 5.10
51 52 2.613595 TGCTCATGGTATCAAATCGCAC 59.386 45.455 0.00 0.00 0.00 5.34
52 53 2.874701 GCTCATGGTATCAAATCGCACT 59.125 45.455 0.00 0.00 0.00 4.40
53 54 3.059325 GCTCATGGTATCAAATCGCACTC 60.059 47.826 0.00 0.00 0.00 3.51
54 55 4.375272 CTCATGGTATCAAATCGCACTCT 58.625 43.478 0.00 0.00 0.00 3.24
55 56 4.122046 TCATGGTATCAAATCGCACTCTG 58.878 43.478 0.00 0.00 0.00 3.35
56 57 2.279741 TGGTATCAAATCGCACTCTGC 58.720 47.619 0.00 0.00 40.69 4.26
65 66 4.157817 GCACTCTGCGCCATTTTG 57.842 55.556 4.18 0.00 31.71 2.44
66 67 2.090524 GCACTCTGCGCCATTTTGC 61.091 57.895 4.18 3.38 31.71 3.68
67 68 1.582968 CACTCTGCGCCATTTTGCT 59.417 52.632 4.18 0.00 0.00 3.91
68 69 0.038892 CACTCTGCGCCATTTTGCTT 60.039 50.000 4.18 0.00 0.00 3.91
69 70 1.199789 CACTCTGCGCCATTTTGCTTA 59.800 47.619 4.18 0.00 0.00 3.09
70 71 1.470098 ACTCTGCGCCATTTTGCTTAG 59.530 47.619 4.18 0.00 0.00 2.18
71 72 1.739466 CTCTGCGCCATTTTGCTTAGA 59.261 47.619 4.18 0.00 0.00 2.10
72 73 1.739466 TCTGCGCCATTTTGCTTAGAG 59.261 47.619 4.18 0.00 0.00 2.43
73 74 1.739466 CTGCGCCATTTTGCTTAGAGA 59.261 47.619 4.18 0.00 0.00 3.10
74 75 2.357009 CTGCGCCATTTTGCTTAGAGAT 59.643 45.455 4.18 0.00 0.00 2.75
75 76 3.540617 TGCGCCATTTTGCTTAGAGATA 58.459 40.909 4.18 0.00 0.00 1.98
76 77 3.944650 TGCGCCATTTTGCTTAGAGATAA 59.055 39.130 4.18 0.00 0.00 1.75
77 78 4.397730 TGCGCCATTTTGCTTAGAGATAAA 59.602 37.500 4.18 0.00 0.00 1.40
78 79 4.735338 GCGCCATTTTGCTTAGAGATAAAC 59.265 41.667 0.00 0.00 0.00 2.01
79 80 5.449177 GCGCCATTTTGCTTAGAGATAAACT 60.449 40.000 0.00 0.00 0.00 2.66
80 81 6.238374 GCGCCATTTTGCTTAGAGATAAACTA 60.238 38.462 0.00 0.00 0.00 2.24
81 82 7.678690 GCGCCATTTTGCTTAGAGATAAACTAA 60.679 37.037 0.00 0.00 0.00 2.24
82 83 8.181573 CGCCATTTTGCTTAGAGATAAACTAAA 58.818 33.333 0.00 0.00 30.95 1.85
83 84 9.855021 GCCATTTTGCTTAGAGATAAACTAAAA 57.145 29.630 0.00 0.00 30.95 1.52
90 91 8.450964 TGCTTAGAGATAAACTAAAATGTGTGC 58.549 33.333 0.00 0.00 30.95 4.57
91 92 7.636359 GCTTAGAGATAAACTAAAATGTGTGCG 59.364 37.037 0.00 0.00 30.95 5.34
92 93 5.869350 AGAGATAAACTAAAATGTGTGCGC 58.131 37.500 0.00 0.00 0.00 6.09
93 94 4.647964 AGATAAACTAAAATGTGTGCGCG 58.352 39.130 0.00 0.00 0.00 6.86
94 95 1.404477 AAACTAAAATGTGTGCGCGC 58.596 45.000 27.26 27.26 0.00 6.86
95 96 0.309302 AACTAAAATGTGTGCGCGCA 59.691 45.000 33.09 33.09 39.66 6.09
96 97 0.521291 ACTAAAATGTGTGCGCGCAT 59.479 45.000 38.62 21.84 46.67 4.73
97 98 1.182673 CTAAAATGTGTGCGCGCATC 58.817 50.000 38.62 30.41 44.23 3.91
98 99 0.519077 TAAAATGTGTGCGCGCATCA 59.481 45.000 38.62 34.51 44.23 3.07
99 100 0.109179 AAAATGTGTGCGCGCATCAT 60.109 45.000 38.62 35.03 44.23 2.45
100 101 0.523968 AAATGTGTGCGCGCATCATC 60.524 50.000 35.74 26.41 44.23 2.92
101 102 1.646624 AATGTGTGCGCGCATCATCA 61.647 50.000 35.74 29.99 44.23 3.07
102 103 1.441732 ATGTGTGCGCGCATCATCAT 61.442 50.000 38.62 30.17 41.54 2.45
103 104 0.809241 TGTGTGCGCGCATCATCATA 60.809 50.000 38.62 24.60 0.00 2.15
104 105 0.110956 GTGTGCGCGCATCATCATAG 60.111 55.000 38.62 0.00 0.00 2.23
105 106 0.249405 TGTGCGCGCATCATCATAGA 60.249 50.000 38.62 6.83 0.00 1.98
106 107 0.162507 GTGCGCGCATCATCATAGAC 59.837 55.000 38.62 16.42 0.00 2.59
107 108 0.249405 TGCGCGCATCATCATAGACA 60.249 50.000 33.09 1.22 0.00 3.41
108 109 0.861185 GCGCGCATCATCATAGACAA 59.139 50.000 29.10 0.00 0.00 3.18
109 110 1.397693 GCGCGCATCATCATAGACAAC 60.398 52.381 29.10 0.00 0.00 3.32
110 111 1.860326 CGCGCATCATCATAGACAACA 59.140 47.619 8.75 0.00 0.00 3.33
111 112 2.284952 CGCGCATCATCATAGACAACAA 59.715 45.455 8.75 0.00 0.00 2.83
112 113 3.059393 CGCGCATCATCATAGACAACAAT 60.059 43.478 8.75 0.00 0.00 2.71
113 114 4.461405 GCGCATCATCATAGACAACAATC 58.539 43.478 0.30 0.00 0.00 2.67
114 115 4.212847 GCGCATCATCATAGACAACAATCT 59.787 41.667 0.30 0.00 0.00 2.40
115 116 5.277683 GCGCATCATCATAGACAACAATCTT 60.278 40.000 0.30 0.00 0.00 2.40
116 117 6.361114 CGCATCATCATAGACAACAATCTTC 58.639 40.000 0.00 0.00 0.00 2.87
117 118 6.018507 CGCATCATCATAGACAACAATCTTCA 60.019 38.462 0.00 0.00 0.00 3.02
118 119 7.307811 CGCATCATCATAGACAACAATCTTCAT 60.308 37.037 0.00 0.00 0.00 2.57
119 120 8.350722 GCATCATCATAGACAACAATCTTCATT 58.649 33.333 0.00 0.00 0.00 2.57
120 121 9.665264 CATCATCATAGACAACAATCTTCATTG 57.335 33.333 0.00 0.00 44.57 2.82
166 167 8.837099 ATTTTGTTATCATATGTCCTTTCCCA 57.163 30.769 1.90 0.00 0.00 4.37
167 168 7.639113 TTTGTTATCATATGTCCTTTCCCAC 57.361 36.000 1.90 0.00 0.00 4.61
168 169 6.320434 TGTTATCATATGTCCTTTCCCACA 57.680 37.500 1.90 0.00 0.00 4.17
169 170 6.726379 TGTTATCATATGTCCTTTCCCACAA 58.274 36.000 1.90 0.00 0.00 3.33
170 171 6.601613 TGTTATCATATGTCCTTTCCCACAAC 59.398 38.462 1.90 0.00 0.00 3.32
171 172 4.927267 TCATATGTCCTTTCCCACAACT 57.073 40.909 1.90 0.00 0.00 3.16
172 173 6.575244 ATCATATGTCCTTTCCCACAACTA 57.425 37.500 1.90 0.00 0.00 2.24
173 174 6.381498 TCATATGTCCTTTCCCACAACTAA 57.619 37.500 1.90 0.00 0.00 2.24
174 175 6.785076 TCATATGTCCTTTCCCACAACTAAA 58.215 36.000 1.90 0.00 0.00 1.85
175 176 6.657541 TCATATGTCCTTTCCCACAACTAAAC 59.342 38.462 1.90 0.00 0.00 2.01
176 177 3.558033 TGTCCTTTCCCACAACTAAACC 58.442 45.455 0.00 0.00 0.00 3.27
177 178 3.053544 TGTCCTTTCCCACAACTAAACCA 60.054 43.478 0.00 0.00 0.00 3.67
178 179 3.955551 GTCCTTTCCCACAACTAAACCAA 59.044 43.478 0.00 0.00 0.00 3.67
179 180 3.955551 TCCTTTCCCACAACTAAACCAAC 59.044 43.478 0.00 0.00 0.00 3.77
180 181 3.958147 CCTTTCCCACAACTAAACCAACT 59.042 43.478 0.00 0.00 0.00 3.16
181 182 5.104024 TCCTTTCCCACAACTAAACCAACTA 60.104 40.000 0.00 0.00 0.00 2.24
182 183 5.595133 CCTTTCCCACAACTAAACCAACTAA 59.405 40.000 0.00 0.00 0.00 2.24
183 184 6.097129 CCTTTCCCACAACTAAACCAACTAAA 59.903 38.462 0.00 0.00 0.00 1.85
184 185 6.453926 TTCCCACAACTAAACCAACTAAAC 57.546 37.500 0.00 0.00 0.00 2.01
185 186 5.507637 TCCCACAACTAAACCAACTAAACA 58.492 37.500 0.00 0.00 0.00 2.83
186 187 5.357596 TCCCACAACTAAACCAACTAAACAC 59.642 40.000 0.00 0.00 0.00 3.32
187 188 5.125739 CCCACAACTAAACCAACTAAACACA 59.874 40.000 0.00 0.00 0.00 3.72
188 189 6.183360 CCCACAACTAAACCAACTAAACACAT 60.183 38.462 0.00 0.00 0.00 3.21
189 190 6.695278 CCACAACTAAACCAACTAAACACATG 59.305 38.462 0.00 0.00 0.00 3.21
190 191 6.695278 CACAACTAAACCAACTAAACACATGG 59.305 38.462 0.00 0.00 38.91 3.66
191 192 6.603997 ACAACTAAACCAACTAAACACATGGA 59.396 34.615 0.00 0.00 36.75 3.41
192 193 7.122948 ACAACTAAACCAACTAAACACATGGAA 59.877 33.333 0.00 0.00 36.75 3.53
193 194 7.648039 ACTAAACCAACTAAACACATGGAAA 57.352 32.000 0.00 0.00 36.75 3.13
194 195 8.068892 ACTAAACCAACTAAACACATGGAAAA 57.931 30.769 0.00 0.00 36.75 2.29
195 196 8.532819 ACTAAACCAACTAAACACATGGAAAAA 58.467 29.630 0.00 0.00 36.75 1.94
218 219 9.558396 AAAAATAAATCAACACACACATGGATT 57.442 25.926 0.00 0.00 0.00 3.01
219 220 8.761575 AAATAAATCAACACACACATGGATTC 57.238 30.769 0.00 0.00 0.00 2.52
220 221 5.787953 AAATCAACACACACATGGATTCA 57.212 34.783 0.00 0.00 0.00 2.57
221 222 5.381174 AATCAACACACACATGGATTCAG 57.619 39.130 0.00 0.00 0.00 3.02
222 223 2.553602 TCAACACACACATGGATTCAGC 59.446 45.455 0.00 0.00 0.00 4.26
223 224 1.159285 ACACACACATGGATTCAGCG 58.841 50.000 0.00 0.00 0.00 5.18
224 225 0.448990 CACACACATGGATTCAGCGG 59.551 55.000 0.00 0.00 0.00 5.52
225 226 0.677731 ACACACATGGATTCAGCGGG 60.678 55.000 0.00 0.00 0.00 6.13
226 227 0.677731 CACACATGGATTCAGCGGGT 60.678 55.000 0.00 0.00 0.00 5.28
227 228 0.392998 ACACATGGATTCAGCGGGTC 60.393 55.000 0.00 0.00 0.00 4.46
228 229 0.107508 CACATGGATTCAGCGGGTCT 60.108 55.000 0.00 0.00 0.00 3.85
229 230 0.179000 ACATGGATTCAGCGGGTCTC 59.821 55.000 0.00 0.00 0.00 3.36
230 231 0.467384 CATGGATTCAGCGGGTCTCT 59.533 55.000 0.00 0.00 0.00 3.10
231 232 0.467384 ATGGATTCAGCGGGTCTCTG 59.533 55.000 0.00 0.00 0.00 3.35
232 233 1.522580 GGATTCAGCGGGTCTCTGC 60.523 63.158 0.00 0.00 45.35 4.26
238 239 4.221422 GCGGGTCTCTGCGCCATA 62.221 66.667 4.18 0.00 35.34 2.74
239 240 2.737180 CGGGTCTCTGCGCCATAT 59.263 61.111 4.18 0.00 0.00 1.78
240 241 1.964448 CGGGTCTCTGCGCCATATA 59.036 57.895 4.18 0.00 0.00 0.86
241 242 0.532573 CGGGTCTCTGCGCCATATAT 59.467 55.000 4.18 0.00 0.00 0.86
242 243 1.066858 CGGGTCTCTGCGCCATATATT 60.067 52.381 4.18 0.00 0.00 1.28
243 244 2.612972 CGGGTCTCTGCGCCATATATTT 60.613 50.000 4.18 0.00 0.00 1.40
244 245 3.412386 GGGTCTCTGCGCCATATATTTT 58.588 45.455 4.18 0.00 0.00 1.82
245 246 3.821033 GGGTCTCTGCGCCATATATTTTT 59.179 43.478 4.18 0.00 0.00 1.94
246 247 5.001232 GGGTCTCTGCGCCATATATTTTTA 58.999 41.667 4.18 0.00 0.00 1.52
247 248 5.106673 GGGTCTCTGCGCCATATATTTTTAC 60.107 44.000 4.18 0.00 0.00 2.01
248 249 5.468746 GGTCTCTGCGCCATATATTTTTACA 59.531 40.000 4.18 0.00 0.00 2.41
249 250 6.017440 GGTCTCTGCGCCATATATTTTTACAA 60.017 38.462 4.18 0.00 0.00 2.41
250 251 7.414436 GTCTCTGCGCCATATATTTTTACAAA 58.586 34.615 4.18 0.00 0.00 2.83
251 252 7.913297 GTCTCTGCGCCATATATTTTTACAAAA 59.087 33.333 4.18 0.00 0.00 2.44
252 253 8.629158 TCTCTGCGCCATATATTTTTACAAAAT 58.371 29.630 4.18 0.44 0.00 1.82
253 254 8.572828 TCTGCGCCATATATTTTTACAAAATG 57.427 30.769 4.18 0.00 0.00 2.32
254 255 8.409371 TCTGCGCCATATATTTTTACAAAATGA 58.591 29.630 4.18 0.00 0.00 2.57
255 256 8.932945 TGCGCCATATATTTTTACAAAATGAA 57.067 26.923 4.18 0.00 0.00 2.57
256 257 9.371136 TGCGCCATATATTTTTACAAAATGAAA 57.629 25.926 4.18 0.00 0.00 2.69
277 278 9.773328 ATGAAAACTATTTACATCGACAACATG 57.227 29.630 0.00 0.00 0.00 3.21
278 279 8.233868 TGAAAACTATTTACATCGACAACATGG 58.766 33.333 0.00 0.00 0.00 3.66
279 280 7.681939 AAACTATTTACATCGACAACATGGT 57.318 32.000 0.00 0.00 0.00 3.55
280 281 7.681939 AACTATTTACATCGACAACATGGTT 57.318 32.000 0.00 0.00 0.00 3.67
281 282 7.681939 ACTATTTACATCGACAACATGGTTT 57.318 32.000 0.00 0.00 0.00 3.27
282 283 8.106247 ACTATTTACATCGACAACATGGTTTT 57.894 30.769 0.00 0.00 0.00 2.43
283 284 9.221933 ACTATTTACATCGACAACATGGTTTTA 57.778 29.630 0.00 0.00 0.00 1.52
284 285 9.702726 CTATTTACATCGACAACATGGTTTTAG 57.297 33.333 0.00 0.00 0.00 1.85
285 286 7.499321 TTTACATCGACAACATGGTTTTAGT 57.501 32.000 0.00 0.00 0.00 2.24
286 287 8.604640 TTTACATCGACAACATGGTTTTAGTA 57.395 30.769 0.00 0.00 0.00 1.82
287 288 6.721571 ACATCGACAACATGGTTTTAGTAG 57.278 37.500 0.00 0.00 0.00 2.57
288 289 5.642063 ACATCGACAACATGGTTTTAGTAGG 59.358 40.000 0.00 0.00 0.00 3.18
289 290 5.217978 TCGACAACATGGTTTTAGTAGGT 57.782 39.130 0.00 0.00 0.00 3.08
290 291 5.232463 TCGACAACATGGTTTTAGTAGGTC 58.768 41.667 0.00 0.00 0.00 3.85
291 292 5.011329 TCGACAACATGGTTTTAGTAGGTCT 59.989 40.000 0.00 0.00 0.00 3.85
292 293 5.699458 CGACAACATGGTTTTAGTAGGTCTT 59.301 40.000 0.00 0.00 0.00 3.01
293 294 6.204108 CGACAACATGGTTTTAGTAGGTCTTT 59.796 38.462 0.00 0.00 0.00 2.52
294 295 7.272037 ACAACATGGTTTTAGTAGGTCTTTG 57.728 36.000 0.00 0.00 0.00 2.77
295 296 5.959618 ACATGGTTTTAGTAGGTCTTTGC 57.040 39.130 0.00 0.00 0.00 3.68
296 297 4.454504 ACATGGTTTTAGTAGGTCTTTGCG 59.545 41.667 0.00 0.00 0.00 4.85
297 298 3.404899 TGGTTTTAGTAGGTCTTTGCGG 58.595 45.455 0.00 0.00 0.00 5.69
298 299 2.161012 GGTTTTAGTAGGTCTTTGCGGC 59.839 50.000 0.00 0.00 0.00 6.53
299 300 2.809696 GTTTTAGTAGGTCTTTGCGGCA 59.190 45.455 0.00 0.00 0.00 5.69
300 301 3.343941 TTTAGTAGGTCTTTGCGGCAT 57.656 42.857 2.28 0.00 0.00 4.40
301 302 3.343941 TTAGTAGGTCTTTGCGGCATT 57.656 42.857 2.28 0.00 0.00 3.56
302 303 2.200373 AGTAGGTCTTTGCGGCATTT 57.800 45.000 2.28 0.00 0.00 2.32
303 304 1.812571 AGTAGGTCTTTGCGGCATTTG 59.187 47.619 2.28 0.00 0.00 2.32
304 305 1.135402 GTAGGTCTTTGCGGCATTTGG 60.135 52.381 2.28 0.00 0.00 3.28
305 306 1.737735 GGTCTTTGCGGCATTTGGC 60.738 57.895 2.28 0.00 43.74 4.52
313 314 2.432972 GGCATTTGGCGCAACTGG 60.433 61.111 10.83 0.00 46.16 4.00
314 315 2.339712 GCATTTGGCGCAACTGGT 59.660 55.556 10.83 0.00 0.00 4.00
315 316 1.734117 GCATTTGGCGCAACTGGTC 60.734 57.895 10.83 0.00 0.00 4.02
316 317 1.659233 CATTTGGCGCAACTGGTCA 59.341 52.632 10.83 0.00 0.00 4.02
317 318 0.031857 CATTTGGCGCAACTGGTCAA 59.968 50.000 10.83 0.00 0.00 3.18
318 319 0.031994 ATTTGGCGCAACTGGTCAAC 59.968 50.000 10.83 0.00 0.00 3.18
319 320 2.329678 TTTGGCGCAACTGGTCAACG 62.330 55.000 10.83 0.00 0.00 4.10
320 321 3.276846 GGCGCAACTGGTCAACGT 61.277 61.111 10.83 0.00 0.00 3.99
321 322 1.957186 GGCGCAACTGGTCAACGTA 60.957 57.895 10.83 0.00 0.00 3.57
322 323 1.296056 GGCGCAACTGGTCAACGTAT 61.296 55.000 10.83 0.00 0.00 3.06
323 324 0.094730 GCGCAACTGGTCAACGTATC 59.905 55.000 0.30 0.00 0.00 2.24
324 325 1.710013 CGCAACTGGTCAACGTATCT 58.290 50.000 0.00 0.00 0.00 1.98
325 326 1.390123 CGCAACTGGTCAACGTATCTG 59.610 52.381 0.00 0.00 0.00 2.90
326 327 2.683968 GCAACTGGTCAACGTATCTGA 58.316 47.619 0.00 0.00 0.00 3.27
357 358 1.232909 TAGAATCCCCCTCTCGGAGT 58.767 55.000 4.69 0.00 31.41 3.85
368 369 4.399219 CCCTCTCGGAGTTGTATCATCTA 58.601 47.826 4.69 0.00 0.00 1.98
369 370 5.013547 CCCTCTCGGAGTTGTATCATCTAT 58.986 45.833 4.69 0.00 0.00 1.98
370 371 6.181190 CCCTCTCGGAGTTGTATCATCTATA 58.819 44.000 4.69 0.00 0.00 1.31
371 372 6.094325 CCCTCTCGGAGTTGTATCATCTATAC 59.906 46.154 4.69 0.00 40.87 1.47
372 373 6.094325 CCTCTCGGAGTTGTATCATCTATACC 59.906 46.154 4.69 0.00 39.91 2.73
373 374 6.540083 TCTCGGAGTTGTATCATCTATACCA 58.460 40.000 4.69 0.00 39.91 3.25
374 375 6.430308 TCTCGGAGTTGTATCATCTATACCAC 59.570 42.308 4.69 0.00 39.91 4.16
375 376 6.304624 TCGGAGTTGTATCATCTATACCACT 58.695 40.000 2.54 2.54 45.22 4.00
380 381 8.712228 AGTTGTATCATCTATACCACTCATCA 57.288 34.615 0.00 0.00 41.06 3.07
381 382 8.580720 AGTTGTATCATCTATACCACTCATCAC 58.419 37.037 0.00 0.00 41.06 3.06
382 383 7.145932 TGTATCATCTATACCACTCATCACG 57.854 40.000 0.00 0.00 39.91 4.35
383 384 4.505313 TCATCTATACCACTCATCACGC 57.495 45.455 0.00 0.00 0.00 5.34
384 385 3.888930 TCATCTATACCACTCATCACGCA 59.111 43.478 0.00 0.00 0.00 5.24
385 386 4.524328 TCATCTATACCACTCATCACGCAT 59.476 41.667 0.00 0.00 0.00 4.73
386 387 5.710099 TCATCTATACCACTCATCACGCATA 59.290 40.000 0.00 0.00 0.00 3.14
387 388 6.378280 TCATCTATACCACTCATCACGCATAT 59.622 38.462 0.00 0.00 0.00 1.78
388 389 5.954335 TCTATACCACTCATCACGCATATG 58.046 41.667 0.00 0.00 0.00 1.78
389 390 1.586422 ACCACTCATCACGCATATGC 58.414 50.000 18.08 18.08 37.78 3.14
390 391 0.870393 CCACTCATCACGCATATGCC 59.130 55.000 21.77 4.68 37.91 4.40
391 392 0.509929 CACTCATCACGCATATGCCG 59.490 55.000 21.77 17.94 37.91 5.69
392 393 0.389025 ACTCATCACGCATATGCCGA 59.611 50.000 21.77 17.96 37.91 5.54
393 394 1.001293 ACTCATCACGCATATGCCGAT 59.999 47.619 21.77 19.30 37.91 4.18
394 395 1.392510 CTCATCACGCATATGCCGATG 59.607 52.381 30.97 30.97 43.36 3.84
395 396 1.150827 CATCACGCATATGCCGATGT 58.849 50.000 29.66 18.48 40.10 3.06
396 397 2.029470 TCATCACGCATATGCCGATGTA 60.029 45.455 32.90 23.99 42.92 2.29
397 398 2.741759 TCACGCATATGCCGATGTAT 57.258 45.000 21.77 0.00 37.91 2.29
398 399 2.606108 TCACGCATATGCCGATGTATC 58.394 47.619 21.77 0.00 37.91 2.24
399 400 2.029470 TCACGCATATGCCGATGTATCA 60.029 45.455 21.77 0.03 37.91 2.15
400 401 2.931969 CACGCATATGCCGATGTATCAT 59.068 45.455 21.77 0.00 37.91 2.45
401 402 3.371898 CACGCATATGCCGATGTATCATT 59.628 43.478 21.77 0.00 37.91 2.57
402 403 4.002982 ACGCATATGCCGATGTATCATTT 58.997 39.130 21.77 0.00 37.91 2.32
443 444 0.321564 CAGGCCACAATCCGAAGACA 60.322 55.000 5.01 0.00 0.00 3.41
444 445 0.036010 AGGCCACAATCCGAAGACAG 60.036 55.000 5.01 0.00 0.00 3.51
473 474 0.101579 GAAAAACCCACCACCACACG 59.898 55.000 0.00 0.00 0.00 4.49
503 504 1.378762 CTCCCCCACCATTGTCGTT 59.621 57.895 0.00 0.00 0.00 3.85
652 659 4.379243 CTCGCGGCAGTCCCAACT 62.379 66.667 6.13 0.00 35.60 3.16
927 934 0.242286 CTGACTGACTGACCGACTGG 59.758 60.000 0.00 0.00 42.84 4.00
970 977 3.322254 CAGAGGAGTACAACCAACAGAGT 59.678 47.826 10.84 0.00 0.00 3.24
1108 1115 3.512516 GCCTCGGACATTGCTGCC 61.513 66.667 0.00 0.00 0.00 4.85
1222 1231 3.704566 TCGGGTCTGTTAGATGCTTATGT 59.295 43.478 0.00 0.00 0.00 2.29
1642 1815 4.889832 AGAAGTTTGTTGTCAGCAGAAG 57.110 40.909 0.00 0.00 0.00 2.85
1644 1817 2.368439 AGTTTGTTGTCAGCAGAAGCA 58.632 42.857 0.00 0.00 45.49 3.91
1725 1898 1.667724 CCTGTCTATGCTTTCAAGGCG 59.332 52.381 0.00 0.00 0.00 5.52
1829 2002 6.770785 AGAAGTTCACCACTAGTAATTTTGCA 59.229 34.615 5.50 0.00 32.94 4.08
1834 2010 6.058833 TCACCACTAGTAATTTTGCACAAGA 58.941 36.000 0.00 0.00 0.00 3.02
1835 2011 6.544197 TCACCACTAGTAATTTTGCACAAGAA 59.456 34.615 0.00 0.00 0.00 2.52
1836 2012 6.857964 CACCACTAGTAATTTTGCACAAGAAG 59.142 38.462 0.00 0.00 0.00 2.85
1837 2013 6.546034 ACCACTAGTAATTTTGCACAAGAAGT 59.454 34.615 0.00 0.00 0.00 3.01
1838 2014 7.068226 ACCACTAGTAATTTTGCACAAGAAGTT 59.932 33.333 0.00 0.00 0.00 2.66
1890 2066 6.799512 ACATTCATAAATTGCACTAGCTTCC 58.200 36.000 0.00 0.00 42.74 3.46
2152 2348 7.724061 GTGGGGTGTATCTTGAATAACCATAAT 59.276 37.037 0.00 0.00 0.00 1.28
2196 2675 1.484240 AGAGTTATCCCAGCTCACTGC 59.516 52.381 0.00 0.00 43.02 4.40
2348 2827 3.266282 CAACCTTGGTTTCGTTGCC 57.734 52.632 1.76 0.00 31.35 4.52
2584 3063 1.922881 TACATCCTGGCCCTGTGCA 60.923 57.895 0.00 0.00 43.89 4.57
2602 3081 7.707893 CCCTGTGCAAATCTATTTAATTTCCAG 59.292 37.037 0.00 0.00 0.00 3.86
2849 3328 5.339200 CCACCTCCACTTTCAGGTATTGTAT 60.339 44.000 0.00 0.00 41.41 2.29
2867 3346 9.226345 GTATTGTATTTCAGATTGCACTTTAGC 57.774 33.333 0.00 0.00 0.00 3.09
3030 3545 4.800554 GGGCTATGGCGCTATGTT 57.199 55.556 17.43 0.00 46.07 2.71
3365 3880 1.774254 TGAGAGGGCTGGTTTTTGAGA 59.226 47.619 0.00 0.00 0.00 3.27
3371 3886 1.688735 GGCTGGTTTTTGAGAAAGGCT 59.311 47.619 0.00 0.00 0.00 4.58
3630 4145 3.397613 GAAGCAGGCTCTGGGCGAT 62.398 63.158 0.00 0.00 42.94 4.58
3758 4273 2.043852 ATGGAGACTCCTCGCCGT 60.044 61.111 22.14 0.00 39.20 5.68
3765 4280 2.752238 CTCCTCGCCGTGGTCTCT 60.752 66.667 4.98 0.00 0.00 3.10
3848 4363 0.121197 TCCCAGGTGGAGGAGGAAAT 59.879 55.000 0.00 0.00 38.61 2.17
3855 4370 3.790408 AGGTGGAGGAGGAAATTGATGAT 59.210 43.478 0.00 0.00 0.00 2.45
3873 4388 2.689471 TGATGCCATTTATGCACCTGTC 59.311 45.455 0.00 0.00 42.38 3.51
3954 4469 6.382919 TCAAAAGGTTATGCCCTAGTAAGT 57.617 37.500 0.00 0.00 38.26 2.24
4012 4528 1.132588 GTCGCCTAGCTTCGCAATAG 58.867 55.000 0.00 0.00 0.00 1.73
4036 4552 6.322712 AGTTGTGGTTGCTGGTCTTAATAAAA 59.677 34.615 0.00 0.00 0.00 1.52
4042 4558 7.180051 TGGTTGCTGGTCTTAATAAAAATCCAT 59.820 33.333 0.00 0.00 0.00 3.41
4082 4598 7.051623 TGGTGTACTCACTCTTGTTTATTGTT 58.948 34.615 0.00 0.00 43.41 2.83
4086 4602 9.602568 TGTACTCACTCTTGTTTATTGTTGTTA 57.397 29.630 0.00 0.00 0.00 2.41
4160 4686 1.270518 TGTGCTCTCTTTCTGTGGCTC 60.271 52.381 0.00 0.00 0.00 4.70
4161 4687 1.051008 TGCTCTCTTTCTGTGGCTCA 58.949 50.000 0.00 0.00 0.00 4.26
4162 4688 1.627329 TGCTCTCTTTCTGTGGCTCAT 59.373 47.619 0.00 0.00 0.00 2.90
4163 4689 2.008329 GCTCTCTTTCTGTGGCTCATG 58.992 52.381 0.00 0.00 0.00 3.07
4164 4690 2.614987 GCTCTCTTTCTGTGGCTCATGT 60.615 50.000 0.00 0.00 0.00 3.21
4165 4691 3.368843 GCTCTCTTTCTGTGGCTCATGTA 60.369 47.826 0.00 0.00 0.00 2.29
4166 4692 4.180057 CTCTCTTTCTGTGGCTCATGTAC 58.820 47.826 0.00 0.00 0.00 2.90
4167 4693 3.834813 TCTCTTTCTGTGGCTCATGTACT 59.165 43.478 0.00 0.00 0.00 2.73
4168 4694 4.081972 TCTCTTTCTGTGGCTCATGTACTC 60.082 45.833 0.00 0.00 0.00 2.59
4169 4695 3.834813 TCTTTCTGTGGCTCATGTACTCT 59.165 43.478 0.00 0.00 0.00 3.24
4249 4775 3.459145 TGTTTCATCGTCGTTTCAAGGA 58.541 40.909 0.00 0.00 0.00 3.36
4269 4795 5.238583 AGGAGTGCAACAGTTTGTCTATAC 58.761 41.667 0.00 0.00 41.43 1.47
4317 4843 3.276021 TGCTTGTGCATTGCAACTG 57.724 47.368 13.94 7.23 45.31 3.16
4328 4854 5.344128 GTGCATTGCAACTGAAGAAGTAATG 59.656 40.000 13.94 0.00 41.47 1.90
4335 4861 5.634896 CAACTGAAGAAGTAATGGACATGC 58.365 41.667 0.00 0.00 38.56 4.06
4349 4875 3.831333 TGGACATGCACACCAAAATGTAT 59.169 39.130 5.97 0.00 33.51 2.29
4350 4876 5.012893 TGGACATGCACACCAAAATGTATA 58.987 37.500 5.97 0.00 33.51 1.47
4374 5504 0.796312 AATGCGACACGACAACATCC 59.204 50.000 0.00 0.00 0.00 3.51
4375 5505 1.351430 ATGCGACACGACAACATCCG 61.351 55.000 0.00 0.00 0.00 4.18
4388 5518 3.717294 ATCCGGACAGTGCCACCC 61.717 66.667 6.12 0.00 0.00 4.61
4475 5605 9.052759 TCTCACAAAGTCTTAAAAATGGACTAC 57.947 33.333 0.00 0.00 39.09 2.73
4492 5622 6.653020 TGGACTACTAATGCAAGATTGATGT 58.347 36.000 0.00 0.00 0.00 3.06
4517 5647 6.350906 ACTCCGGACGGATTAATTCAATAAA 58.649 36.000 14.50 0.00 44.24 1.40
4519 5649 7.501225 ACTCCGGACGGATTAATTCAATAAATT 59.499 33.333 14.50 0.00 44.24 1.82
4520 5650 7.867752 TCCGGACGGATTAATTCAATAAATTC 58.132 34.615 9.76 0.00 39.76 2.17
4522 5652 8.132362 CCGGACGGATTAATTCAATAAATTCAA 58.868 33.333 4.40 0.00 36.80 2.69
4523 5653 9.677567 CGGACGGATTAATTCAATAAATTCAAT 57.322 29.630 0.00 0.00 38.53 2.57
4563 5693 2.500509 AGCGACGATCCTGAAATCTC 57.499 50.000 0.00 0.00 0.00 2.75
4590 5720 3.227614 ACTCCCAAAGCCGTTAAATGTT 58.772 40.909 0.00 0.00 0.00 2.71
4611 5741 5.645929 TGTTTATTGAAGCGACCATACATGT 59.354 36.000 2.69 2.69 0.00 3.21
4673 5811 3.057526 GGAGTTACAATCCCACAAAGCAC 60.058 47.826 0.00 0.00 0.00 4.40
4724 5862 2.575461 GTGCAATGCAGGCCTTCC 59.425 61.111 8.73 0.00 40.08 3.46
4725 5863 3.063704 TGCAATGCAGGCCTTCCG 61.064 61.111 0.00 0.00 37.47 4.30
4726 5864 2.751436 GCAATGCAGGCCTTCCGA 60.751 61.111 0.00 0.00 37.47 4.55
4727 5865 2.342650 GCAATGCAGGCCTTCCGAA 61.343 57.895 0.00 0.00 37.47 4.30
4728 5866 1.508088 CAATGCAGGCCTTCCGAAC 59.492 57.895 0.00 0.00 37.47 3.95
4729 5867 1.074775 AATGCAGGCCTTCCGAACA 59.925 52.632 0.00 0.00 37.47 3.18
4730 5868 0.323725 AATGCAGGCCTTCCGAACAT 60.324 50.000 0.00 0.00 37.47 2.71
4731 5869 0.546122 ATGCAGGCCTTCCGAACATA 59.454 50.000 0.00 0.00 37.47 2.29
4732 5870 0.392461 TGCAGGCCTTCCGAACATAC 60.392 55.000 0.00 0.00 37.47 2.39
4733 5871 0.107654 GCAGGCCTTCCGAACATACT 60.108 55.000 0.00 0.00 37.47 2.12
4734 5872 1.679032 GCAGGCCTTCCGAACATACTT 60.679 52.381 0.00 0.00 37.47 2.24
4735 5873 2.280628 CAGGCCTTCCGAACATACTTC 58.719 52.381 0.00 0.00 37.47 3.01
4736 5874 1.906574 AGGCCTTCCGAACATACTTCA 59.093 47.619 0.00 0.00 37.47 3.02
4737 5875 2.505819 AGGCCTTCCGAACATACTTCAT 59.494 45.455 0.00 0.00 37.47 2.57
4738 5876 3.054361 AGGCCTTCCGAACATACTTCATT 60.054 43.478 0.00 0.00 37.47 2.57
4739 5877 3.694566 GGCCTTCCGAACATACTTCATTT 59.305 43.478 0.00 0.00 0.00 2.32
4740 5878 4.879545 GGCCTTCCGAACATACTTCATTTA 59.120 41.667 0.00 0.00 0.00 1.40
4741 5879 5.355910 GGCCTTCCGAACATACTTCATTTAA 59.644 40.000 0.00 0.00 0.00 1.52
4742 5880 6.255950 GCCTTCCGAACATACTTCATTTAAC 58.744 40.000 0.00 0.00 0.00 2.01
4743 5881 6.128117 GCCTTCCGAACATACTTCATTTAACA 60.128 38.462 0.00 0.00 0.00 2.41
4744 5882 7.415206 GCCTTCCGAACATACTTCATTTAACAT 60.415 37.037 0.00 0.00 0.00 2.71
4745 5883 9.104965 CCTTCCGAACATACTTCATTTAACATA 57.895 33.333 0.00 0.00 0.00 2.29
4764 5902 7.781324 AACATATCTAGCCAATTTAATGGGG 57.219 36.000 0.00 0.00 41.01 4.96
4765 5903 6.863322 ACATATCTAGCCAATTTAATGGGGT 58.137 36.000 8.25 8.25 41.01 4.95
4766 5904 7.995663 ACATATCTAGCCAATTTAATGGGGTA 58.004 34.615 9.63 9.63 41.01 3.69
4767 5905 8.452868 ACATATCTAGCCAATTTAATGGGGTAA 58.547 33.333 10.99 4.07 41.01 2.85
4768 5906 9.308000 CATATCTAGCCAATTTAATGGGGTAAA 57.692 33.333 10.99 0.00 41.01 2.01
4769 5907 7.839680 ATCTAGCCAATTTAATGGGGTAAAG 57.160 36.000 10.99 3.41 41.01 1.85
4770 5908 4.753516 AGCCAATTTAATGGGGTAAAGC 57.246 40.909 0.48 0.00 41.01 3.51
4771 5909 4.100373 AGCCAATTTAATGGGGTAAAGCA 58.900 39.130 0.48 0.00 41.01 3.91
4772 5910 4.721274 AGCCAATTTAATGGGGTAAAGCAT 59.279 37.500 0.48 0.00 41.01 3.79
4773 5911 5.902431 AGCCAATTTAATGGGGTAAAGCATA 59.098 36.000 0.48 0.00 41.01 3.14
4774 5912 6.558394 AGCCAATTTAATGGGGTAAAGCATAT 59.442 34.615 0.48 0.00 41.01 1.78
4775 5913 7.732593 AGCCAATTTAATGGGGTAAAGCATATA 59.267 33.333 0.48 0.00 41.01 0.86
4776 5914 8.539544 GCCAATTTAATGGGGTAAAGCATATAT 58.460 33.333 0.00 0.00 41.01 0.86
4780 5918 9.969001 ATTTAATGGGGTAAAGCATATATACGT 57.031 29.630 0.00 0.00 0.00 3.57
4784 5922 9.609346 AATGGGGTAAAGCATATATACGTATTC 57.391 33.333 14.33 0.00 0.00 1.75
4785 5923 7.259882 TGGGGTAAAGCATATATACGTATTCG 58.740 38.462 14.33 1.43 43.34 3.34
4786 5924 6.199719 GGGGTAAAGCATATATACGTATTCGC 59.800 42.308 14.33 11.07 41.18 4.70
4787 5925 6.976925 GGGTAAAGCATATATACGTATTCGCT 59.023 38.462 14.33 13.05 41.18 4.93
4788 5926 8.131100 GGGTAAAGCATATATACGTATTCGCTA 58.869 37.037 14.33 0.00 41.18 4.26
4789 5927 8.951969 GGTAAAGCATATATACGTATTCGCTAC 58.048 37.037 14.33 11.41 41.18 3.58
4790 5928 9.713740 GTAAAGCATATATACGTATTCGCTACT 57.286 33.333 14.33 9.62 41.18 2.57
4791 5929 8.838452 AAAGCATATATACGTATTCGCTACTC 57.162 34.615 14.33 0.00 41.18 2.59
4792 5930 6.957150 AGCATATATACGTATTCGCTACTCC 58.043 40.000 14.33 0.00 41.18 3.85
4793 5931 6.766944 AGCATATATACGTATTCGCTACTCCT 59.233 38.462 14.33 0.00 41.18 3.69
4794 5932 7.282675 AGCATATATACGTATTCGCTACTCCTT 59.717 37.037 14.33 0.00 41.18 3.36
4795 5933 8.554528 GCATATATACGTATTCGCTACTCCTTA 58.445 37.037 14.33 0.00 41.18 2.69
4796 5934 9.861138 CATATATACGTATTCGCTACTCCTTAC 57.139 37.037 14.33 0.00 41.18 2.34
4797 5935 9.829507 ATATATACGTATTCGCTACTCCTTACT 57.170 33.333 14.33 0.00 41.18 2.24
4798 5936 4.809815 ACGTATTCGCTACTCCTTACTC 57.190 45.455 0.00 0.00 41.18 2.59
4799 5937 3.563390 ACGTATTCGCTACTCCTTACTCC 59.437 47.826 0.00 0.00 41.18 3.85
4800 5938 3.363772 CGTATTCGCTACTCCTTACTCCG 60.364 52.174 0.00 0.00 0.00 4.63
4801 5939 0.737219 TTCGCTACTCCTTACTCCGC 59.263 55.000 0.00 0.00 0.00 5.54
4802 5940 0.393402 TCGCTACTCCTTACTCCGCA 60.393 55.000 0.00 0.00 0.00 5.69
4803 5941 0.029567 CGCTACTCCTTACTCCGCAG 59.970 60.000 0.00 0.00 0.00 5.18
4804 5942 1.390565 GCTACTCCTTACTCCGCAGA 58.609 55.000 0.00 0.00 0.00 4.26
4805 5943 1.749634 GCTACTCCTTACTCCGCAGAA 59.250 52.381 0.00 0.00 0.00 3.02
4806 5944 2.165845 GCTACTCCTTACTCCGCAGAAA 59.834 50.000 0.00 0.00 0.00 2.52
4807 5945 3.368116 GCTACTCCTTACTCCGCAGAAAA 60.368 47.826 0.00 0.00 0.00 2.29
4808 5946 3.764237 ACTCCTTACTCCGCAGAAAAA 57.236 42.857 0.00 0.00 0.00 1.94
4826 5964 4.563140 AAAAAGATGCAATGATGGCCTT 57.437 36.364 3.32 0.00 0.00 4.35
4827 5965 3.814005 AAAGATGCAATGATGGCCTTC 57.186 42.857 11.69 11.69 0.00 3.46
4828 5966 1.700955 AGATGCAATGATGGCCTTCC 58.299 50.000 15.62 1.33 0.00 3.46
4829 5967 1.217183 AGATGCAATGATGGCCTTCCT 59.783 47.619 15.62 3.36 0.00 3.36
4830 5968 2.444388 AGATGCAATGATGGCCTTCCTA 59.556 45.455 15.62 0.00 0.00 2.94
4831 5969 2.824689 TGCAATGATGGCCTTCCTAA 57.175 45.000 15.62 0.00 0.00 2.69
4832 5970 2.658285 TGCAATGATGGCCTTCCTAAG 58.342 47.619 15.62 4.94 0.00 2.18
4900 6038 9.835389 ATGATACTCGTCTATAATACTACCTCC 57.165 37.037 0.00 0.00 0.00 4.30
4901 6039 8.263640 TGATACTCGTCTATAATACTACCTCCC 58.736 40.741 0.00 0.00 0.00 4.30
4902 6040 6.700845 ACTCGTCTATAATACTACCTCCCT 57.299 41.667 0.00 0.00 0.00 4.20
4903 6041 7.805083 ACTCGTCTATAATACTACCTCCCTA 57.195 40.000 0.00 0.00 0.00 3.53
4904 6042 8.212259 ACTCGTCTATAATACTACCTCCCTAA 57.788 38.462 0.00 0.00 0.00 2.69
4905 6043 8.834733 ACTCGTCTATAATACTACCTCCCTAAT 58.165 37.037 0.00 0.00 0.00 1.73
4906 6044 9.111613 CTCGTCTATAATACTACCTCCCTAATG 57.888 40.741 0.00 0.00 0.00 1.90
4907 6045 7.555554 TCGTCTATAATACTACCTCCCTAATGC 59.444 40.741 0.00 0.00 0.00 3.56
4908 6046 7.338703 CGTCTATAATACTACCTCCCTAATGCA 59.661 40.741 0.00 0.00 0.00 3.96
4909 6047 9.203163 GTCTATAATACTACCTCCCTAATGCAT 57.797 37.037 0.00 0.00 0.00 3.96
4915 6053 9.562226 AATACTACCTCCCTAATGCATAGTATT 57.438 33.333 15.24 15.24 38.56 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.395707 GCATGTTGAAAATATTTGCATTTTTCA 57.604 25.926 9.75 16.73 43.71 2.69
7 8 9.615295 AGCATGTTGAAAATATTTGCATTTTTC 57.385 25.926 9.75 13.46 38.04 2.29
8 9 9.615295 GAGCATGTTGAAAATATTTGCATTTTT 57.385 25.926 9.75 0.00 38.04 1.94
9 10 8.784994 TGAGCATGTTGAAAATATTTGCATTTT 58.215 25.926 9.75 0.00 40.06 1.82
10 11 8.325421 TGAGCATGTTGAAAATATTTGCATTT 57.675 26.923 9.75 0.00 0.00 2.32
11 12 7.908827 TGAGCATGTTGAAAATATTTGCATT 57.091 28.000 9.75 0.00 0.00 3.56
12 13 7.011950 CCATGAGCATGTTGAAAATATTTGCAT 59.988 33.333 9.75 5.98 37.11 3.96
13 14 6.314152 CCATGAGCATGTTGAAAATATTTGCA 59.686 34.615 4.62 4.62 37.11 4.08
14 15 6.314400 ACCATGAGCATGTTGAAAATATTTGC 59.686 34.615 0.39 0.00 37.11 3.68
15 16 7.837202 ACCATGAGCATGTTGAAAATATTTG 57.163 32.000 0.39 0.00 37.11 2.32
16 17 9.754382 GATACCATGAGCATGTTGAAAATATTT 57.246 29.630 9.39 0.00 37.11 1.40
17 18 8.916062 TGATACCATGAGCATGTTGAAAATATT 58.084 29.630 9.39 0.00 37.11 1.28
18 19 8.467963 TGATACCATGAGCATGTTGAAAATAT 57.532 30.769 9.39 0.00 37.11 1.28
19 20 7.878547 TGATACCATGAGCATGTTGAAAATA 57.121 32.000 9.39 0.00 37.11 1.40
20 21 6.778834 TGATACCATGAGCATGTTGAAAAT 57.221 33.333 9.39 0.00 37.11 1.82
21 22 6.587206 TTGATACCATGAGCATGTTGAAAA 57.413 33.333 9.39 0.00 37.11 2.29
22 23 6.587206 TTTGATACCATGAGCATGTTGAAA 57.413 33.333 9.39 0.00 37.11 2.69
23 24 6.458615 CGATTTGATACCATGAGCATGTTGAA 60.459 38.462 9.39 0.00 37.11 2.69
24 25 5.007921 CGATTTGATACCATGAGCATGTTGA 59.992 40.000 9.39 0.00 37.11 3.18
25 26 5.209977 CGATTTGATACCATGAGCATGTTG 58.790 41.667 9.39 0.00 37.11 3.33
26 27 4.261322 GCGATTTGATACCATGAGCATGTT 60.261 41.667 9.39 0.00 37.11 2.71
27 28 3.251729 GCGATTTGATACCATGAGCATGT 59.748 43.478 9.39 1.37 37.11 3.21
28 29 3.251487 TGCGATTTGATACCATGAGCATG 59.749 43.478 3.50 3.50 38.51 4.06
29 30 3.251729 GTGCGATTTGATACCATGAGCAT 59.748 43.478 0.00 0.00 34.54 3.79
30 31 2.613595 GTGCGATTTGATACCATGAGCA 59.386 45.455 0.00 0.00 0.00 4.26
31 32 2.874701 AGTGCGATTTGATACCATGAGC 59.125 45.455 0.00 0.00 0.00 4.26
32 33 4.210746 CAGAGTGCGATTTGATACCATGAG 59.789 45.833 0.00 0.00 0.00 2.90
33 34 4.122046 CAGAGTGCGATTTGATACCATGA 58.878 43.478 0.00 0.00 0.00 3.07
34 35 3.303593 GCAGAGTGCGATTTGATACCATG 60.304 47.826 0.00 0.00 31.71 3.66
35 36 2.874701 GCAGAGTGCGATTTGATACCAT 59.125 45.455 0.00 0.00 31.71 3.55
36 37 2.279741 GCAGAGTGCGATTTGATACCA 58.720 47.619 0.00 0.00 31.71 3.25
48 49 2.090524 GCAAAATGGCGCAGAGTGC 61.091 57.895 10.83 8.21 40.69 4.40
49 50 0.038892 AAGCAAAATGGCGCAGAGTG 60.039 50.000 10.83 0.86 39.27 3.51
50 51 1.470098 CTAAGCAAAATGGCGCAGAGT 59.530 47.619 10.83 0.00 39.27 3.24
51 52 1.739466 TCTAAGCAAAATGGCGCAGAG 59.261 47.619 10.83 0.00 39.27 3.35
52 53 1.739466 CTCTAAGCAAAATGGCGCAGA 59.261 47.619 10.83 0.00 39.27 4.26
53 54 1.739466 TCTCTAAGCAAAATGGCGCAG 59.261 47.619 10.83 0.00 39.27 5.18
54 55 1.819928 TCTCTAAGCAAAATGGCGCA 58.180 45.000 10.83 0.00 39.27 6.09
55 56 4.552166 TTATCTCTAAGCAAAATGGCGC 57.448 40.909 0.00 0.00 39.27 6.53
56 57 6.124088 AGTTTATCTCTAAGCAAAATGGCG 57.876 37.500 0.00 0.00 39.27 5.69
57 58 9.855021 TTTTAGTTTATCTCTAAGCAAAATGGC 57.145 29.630 0.00 0.00 0.00 4.40
64 65 8.450964 GCACACATTTTAGTTTATCTCTAAGCA 58.549 33.333 0.00 0.00 0.00 3.91
65 66 7.636359 CGCACACATTTTAGTTTATCTCTAAGC 59.364 37.037 0.00 0.00 0.00 3.09
66 67 7.636359 GCGCACACATTTTAGTTTATCTCTAAG 59.364 37.037 0.30 0.00 0.00 2.18
67 68 7.461107 GCGCACACATTTTAGTTTATCTCTAA 58.539 34.615 0.30 0.00 0.00 2.10
68 69 6.237728 CGCGCACACATTTTAGTTTATCTCTA 60.238 38.462 8.75 0.00 0.00 2.43
69 70 5.445939 CGCGCACACATTTTAGTTTATCTCT 60.446 40.000 8.75 0.00 0.00 3.10
70 71 4.723862 CGCGCACACATTTTAGTTTATCTC 59.276 41.667 8.75 0.00 0.00 2.75
71 72 4.647964 CGCGCACACATTTTAGTTTATCT 58.352 39.130 8.75 0.00 0.00 1.98
72 73 3.237433 GCGCGCACACATTTTAGTTTATC 59.763 43.478 29.10 0.00 0.00 1.75
73 74 3.168193 GCGCGCACACATTTTAGTTTAT 58.832 40.909 29.10 0.00 0.00 1.40
74 75 2.031944 TGCGCGCACACATTTTAGTTTA 60.032 40.909 33.09 0.00 0.00 2.01
75 76 1.268794 TGCGCGCACACATTTTAGTTT 60.269 42.857 33.09 0.00 0.00 2.66
76 77 0.309302 TGCGCGCACACATTTTAGTT 59.691 45.000 33.09 0.00 0.00 2.24
77 78 0.521291 ATGCGCGCACACATTTTAGT 59.479 45.000 39.05 14.13 0.00 2.24
78 79 1.182673 GATGCGCGCACACATTTTAG 58.817 50.000 39.05 0.00 0.00 1.85
79 80 0.519077 TGATGCGCGCACACATTTTA 59.481 45.000 39.05 13.85 0.00 1.52
80 81 0.109179 ATGATGCGCGCACACATTTT 60.109 45.000 39.05 19.84 0.00 1.82
81 82 0.523968 GATGATGCGCGCACACATTT 60.524 50.000 37.09 26.33 0.00 2.32
82 83 1.063006 GATGATGCGCGCACACATT 59.937 52.632 37.09 25.54 0.00 2.71
83 84 1.441732 ATGATGATGCGCGCACACAT 61.442 50.000 37.32 37.32 0.00 3.21
84 85 0.809241 TATGATGATGCGCGCACACA 60.809 50.000 39.05 35.39 0.00 3.72
85 86 0.110956 CTATGATGATGCGCGCACAC 60.111 55.000 39.05 31.17 0.00 3.82
86 87 0.249405 TCTATGATGATGCGCGCACA 60.249 50.000 39.05 32.88 0.00 4.57
87 88 0.162507 GTCTATGATGATGCGCGCAC 59.837 55.000 39.05 28.53 0.00 5.34
88 89 0.249405 TGTCTATGATGATGCGCGCA 60.249 50.000 38.27 38.27 0.00 6.09
89 90 0.861185 TTGTCTATGATGATGCGCGC 59.139 50.000 27.26 27.26 0.00 6.86
90 91 1.860326 TGTTGTCTATGATGATGCGCG 59.140 47.619 0.00 0.00 0.00 6.86
91 92 3.950087 TTGTTGTCTATGATGATGCGC 57.050 42.857 0.00 0.00 0.00 6.09
92 93 5.919272 AGATTGTTGTCTATGATGATGCG 57.081 39.130 0.00 0.00 0.00 4.73
93 94 7.255491 TGAAGATTGTTGTCTATGATGATGC 57.745 36.000 0.00 0.00 0.00 3.91
94 95 9.665264 CAATGAAGATTGTTGTCTATGATGATG 57.335 33.333 0.00 0.00 35.19 3.07
140 141 9.265862 TGGGAAAGGACATATGATAACAAAATT 57.734 29.630 10.38 0.00 0.00 1.82
141 142 8.695456 GTGGGAAAGGACATATGATAACAAAAT 58.305 33.333 10.38 0.00 0.00 1.82
142 143 7.671819 TGTGGGAAAGGACATATGATAACAAAA 59.328 33.333 10.38 0.00 0.00 2.44
143 144 7.178573 TGTGGGAAAGGACATATGATAACAAA 58.821 34.615 10.38 0.00 0.00 2.83
144 145 6.726379 TGTGGGAAAGGACATATGATAACAA 58.274 36.000 10.38 0.00 0.00 2.83
145 146 6.320434 TGTGGGAAAGGACATATGATAACA 57.680 37.500 10.38 0.00 0.00 2.41
146 147 6.828785 AGTTGTGGGAAAGGACATATGATAAC 59.171 38.462 10.38 0.00 0.00 1.89
147 148 6.969043 AGTTGTGGGAAAGGACATATGATAA 58.031 36.000 10.38 0.00 0.00 1.75
148 149 6.575244 AGTTGTGGGAAAGGACATATGATA 57.425 37.500 10.38 0.00 0.00 2.15
149 150 5.456921 AGTTGTGGGAAAGGACATATGAT 57.543 39.130 10.38 0.00 0.00 2.45
150 151 4.927267 AGTTGTGGGAAAGGACATATGA 57.073 40.909 10.38 0.00 0.00 2.15
151 152 6.127730 GGTTTAGTTGTGGGAAAGGACATATG 60.128 42.308 0.00 0.00 0.00 1.78
152 153 5.949952 GGTTTAGTTGTGGGAAAGGACATAT 59.050 40.000 0.00 0.00 0.00 1.78
153 154 5.163077 TGGTTTAGTTGTGGGAAAGGACATA 60.163 40.000 0.00 0.00 0.00 2.29
154 155 4.149598 GGTTTAGTTGTGGGAAAGGACAT 58.850 43.478 0.00 0.00 0.00 3.06
155 156 3.053544 TGGTTTAGTTGTGGGAAAGGACA 60.054 43.478 0.00 0.00 0.00 4.02
156 157 3.558033 TGGTTTAGTTGTGGGAAAGGAC 58.442 45.455 0.00 0.00 0.00 3.85
157 158 3.955524 TGGTTTAGTTGTGGGAAAGGA 57.044 42.857 0.00 0.00 0.00 3.36
158 159 3.958147 AGTTGGTTTAGTTGTGGGAAAGG 59.042 43.478 0.00 0.00 0.00 3.11
159 160 6.702716 TTAGTTGGTTTAGTTGTGGGAAAG 57.297 37.500 0.00 0.00 0.00 2.62
160 161 6.436532 TGTTTAGTTGGTTTAGTTGTGGGAAA 59.563 34.615 0.00 0.00 0.00 3.13
161 162 5.950549 TGTTTAGTTGGTTTAGTTGTGGGAA 59.049 36.000 0.00 0.00 0.00 3.97
162 163 5.357596 GTGTTTAGTTGGTTTAGTTGTGGGA 59.642 40.000 0.00 0.00 0.00 4.37
163 164 5.125739 TGTGTTTAGTTGGTTTAGTTGTGGG 59.874 40.000 0.00 0.00 0.00 4.61
164 165 6.197364 TGTGTTTAGTTGGTTTAGTTGTGG 57.803 37.500 0.00 0.00 0.00 4.17
165 166 6.695278 CCATGTGTTTAGTTGGTTTAGTTGTG 59.305 38.462 0.00 0.00 0.00 3.33
166 167 6.603997 TCCATGTGTTTAGTTGGTTTAGTTGT 59.396 34.615 0.00 0.00 0.00 3.32
167 168 7.033530 TCCATGTGTTTAGTTGGTTTAGTTG 57.966 36.000 0.00 0.00 0.00 3.16
168 169 7.648039 TTCCATGTGTTTAGTTGGTTTAGTT 57.352 32.000 0.00 0.00 0.00 2.24
169 170 7.648039 TTTCCATGTGTTTAGTTGGTTTAGT 57.352 32.000 0.00 0.00 0.00 2.24
170 171 8.934507 TTTTTCCATGTGTTTAGTTGGTTTAG 57.065 30.769 0.00 0.00 0.00 1.85
192 193 9.558396 AATCCATGTGTGTGTTGATTTATTTTT 57.442 25.926 0.00 0.00 0.00 1.94
193 194 9.206870 GAATCCATGTGTGTGTTGATTTATTTT 57.793 29.630 0.00 0.00 0.00 1.82
194 195 8.366401 TGAATCCATGTGTGTGTTGATTTATTT 58.634 29.630 0.00 0.00 0.00 1.40
195 196 7.894708 TGAATCCATGTGTGTGTTGATTTATT 58.105 30.769 0.00 0.00 0.00 1.40
196 197 7.465353 TGAATCCATGTGTGTGTTGATTTAT 57.535 32.000 0.00 0.00 0.00 1.40
197 198 6.570186 GCTGAATCCATGTGTGTGTTGATTTA 60.570 38.462 0.00 0.00 0.00 1.40
198 199 5.775686 CTGAATCCATGTGTGTGTTGATTT 58.224 37.500 0.00 0.00 0.00 2.17
199 200 4.321452 GCTGAATCCATGTGTGTGTTGATT 60.321 41.667 0.00 0.00 0.00 2.57
200 201 3.192001 GCTGAATCCATGTGTGTGTTGAT 59.808 43.478 0.00 0.00 0.00 2.57
201 202 2.553602 GCTGAATCCATGTGTGTGTTGA 59.446 45.455 0.00 0.00 0.00 3.18
202 203 2.666344 CGCTGAATCCATGTGTGTGTTG 60.666 50.000 0.00 0.00 0.00 3.33
203 204 1.536766 CGCTGAATCCATGTGTGTGTT 59.463 47.619 0.00 0.00 0.00 3.32
204 205 1.159285 CGCTGAATCCATGTGTGTGT 58.841 50.000 0.00 0.00 0.00 3.72
205 206 0.448990 CCGCTGAATCCATGTGTGTG 59.551 55.000 0.00 0.00 0.00 3.82
206 207 0.677731 CCCGCTGAATCCATGTGTGT 60.678 55.000 0.00 0.00 0.00 3.72
207 208 0.677731 ACCCGCTGAATCCATGTGTG 60.678 55.000 0.00 0.00 0.00 3.82
208 209 0.392998 GACCCGCTGAATCCATGTGT 60.393 55.000 0.00 0.00 0.00 3.72
209 210 0.107508 AGACCCGCTGAATCCATGTG 60.108 55.000 0.00 0.00 0.00 3.21
210 211 0.179000 GAGACCCGCTGAATCCATGT 59.821 55.000 0.00 0.00 0.00 3.21
211 212 0.467384 AGAGACCCGCTGAATCCATG 59.533 55.000 0.00 0.00 0.00 3.66
212 213 0.467384 CAGAGACCCGCTGAATCCAT 59.533 55.000 0.00 0.00 33.20 3.41
213 214 1.900351 CAGAGACCCGCTGAATCCA 59.100 57.895 0.00 0.00 33.20 3.41
214 215 1.522580 GCAGAGACCCGCTGAATCC 60.523 63.158 1.96 0.00 33.20 3.01
215 216 1.880340 CGCAGAGACCCGCTGAATC 60.880 63.158 1.96 0.00 33.20 2.52
216 217 2.185350 CGCAGAGACCCGCTGAAT 59.815 61.111 1.96 0.00 33.20 2.57
217 218 4.742201 GCGCAGAGACCCGCTGAA 62.742 66.667 0.30 0.00 46.14 3.02
222 223 0.532573 ATATATGGCGCAGAGACCCG 59.467 55.000 10.83 0.00 0.00 5.28
223 224 2.770164 AATATATGGCGCAGAGACCC 57.230 50.000 10.83 0.00 0.00 4.46
224 225 5.468746 TGTAAAAATATATGGCGCAGAGACC 59.531 40.000 10.83 0.00 0.00 3.85
225 226 6.539649 TGTAAAAATATATGGCGCAGAGAC 57.460 37.500 10.83 0.00 0.00 3.36
226 227 7.561021 TTTGTAAAAATATATGGCGCAGAGA 57.439 32.000 10.83 0.00 0.00 3.10
227 228 8.693504 CATTTTGTAAAAATATATGGCGCAGAG 58.306 33.333 10.83 0.00 0.00 3.35
228 229 8.409371 TCATTTTGTAAAAATATATGGCGCAGA 58.591 29.630 10.83 0.00 0.00 4.26
229 230 8.572828 TCATTTTGTAAAAATATATGGCGCAG 57.427 30.769 10.83 0.00 0.00 5.18
230 231 8.932945 TTCATTTTGTAAAAATATATGGCGCA 57.067 26.923 10.83 0.00 0.00 6.09
251 252 9.773328 CATGTTGTCGATGTAAATAGTTTTCAT 57.227 29.630 0.00 0.00 0.00 2.57
252 253 8.233868 CCATGTTGTCGATGTAAATAGTTTTCA 58.766 33.333 0.00 0.00 0.00 2.69
253 254 8.234546 ACCATGTTGTCGATGTAAATAGTTTTC 58.765 33.333 0.00 0.00 0.00 2.29
254 255 8.106247 ACCATGTTGTCGATGTAAATAGTTTT 57.894 30.769 0.00 0.00 0.00 2.43
255 256 7.681939 ACCATGTTGTCGATGTAAATAGTTT 57.318 32.000 0.00 0.00 0.00 2.66
256 257 7.681939 AACCATGTTGTCGATGTAAATAGTT 57.318 32.000 0.00 0.00 0.00 2.24
257 258 7.681939 AAACCATGTTGTCGATGTAAATAGT 57.318 32.000 0.00 0.00 0.00 2.12
258 259 9.702726 CTAAAACCATGTTGTCGATGTAAATAG 57.297 33.333 0.00 0.00 0.00 1.73
259 260 9.221933 ACTAAAACCATGTTGTCGATGTAAATA 57.778 29.630 0.00 0.00 0.00 1.40
260 261 8.106247 ACTAAAACCATGTTGTCGATGTAAAT 57.894 30.769 0.00 0.00 0.00 1.40
261 262 7.499321 ACTAAAACCATGTTGTCGATGTAAA 57.501 32.000 0.00 0.00 0.00 2.01
262 263 7.332430 CCTACTAAAACCATGTTGTCGATGTAA 59.668 37.037 0.00 0.00 0.00 2.41
263 264 6.814644 CCTACTAAAACCATGTTGTCGATGTA 59.185 38.462 0.00 0.00 0.00 2.29
264 265 5.642063 CCTACTAAAACCATGTTGTCGATGT 59.358 40.000 0.00 0.00 0.00 3.06
265 266 5.642063 ACCTACTAAAACCATGTTGTCGATG 59.358 40.000 0.00 0.00 0.00 3.84
266 267 5.801380 ACCTACTAAAACCATGTTGTCGAT 58.199 37.500 0.00 0.00 0.00 3.59
267 268 5.011329 AGACCTACTAAAACCATGTTGTCGA 59.989 40.000 0.00 0.00 0.00 4.20
268 269 5.235516 AGACCTACTAAAACCATGTTGTCG 58.764 41.667 0.00 0.00 0.00 4.35
269 270 7.360361 CAAAGACCTACTAAAACCATGTTGTC 58.640 38.462 0.00 0.00 0.00 3.18
270 271 6.238925 GCAAAGACCTACTAAAACCATGTTGT 60.239 38.462 0.00 0.00 0.00 3.32
271 272 6.149633 GCAAAGACCTACTAAAACCATGTTG 58.850 40.000 0.00 0.00 0.00 3.33
272 273 5.048991 CGCAAAGACCTACTAAAACCATGTT 60.049 40.000 0.00 0.00 0.00 2.71
273 274 4.454504 CGCAAAGACCTACTAAAACCATGT 59.545 41.667 0.00 0.00 0.00 3.21
274 275 4.142687 CCGCAAAGACCTACTAAAACCATG 60.143 45.833 0.00 0.00 0.00 3.66
275 276 4.007659 CCGCAAAGACCTACTAAAACCAT 58.992 43.478 0.00 0.00 0.00 3.55
276 277 3.404899 CCGCAAAGACCTACTAAAACCA 58.595 45.455 0.00 0.00 0.00 3.67
277 278 2.161012 GCCGCAAAGACCTACTAAAACC 59.839 50.000 0.00 0.00 0.00 3.27
278 279 2.809696 TGCCGCAAAGACCTACTAAAAC 59.190 45.455 0.00 0.00 0.00 2.43
279 280 3.128852 TGCCGCAAAGACCTACTAAAA 57.871 42.857 0.00 0.00 0.00 1.52
280 281 2.843401 TGCCGCAAAGACCTACTAAA 57.157 45.000 0.00 0.00 0.00 1.85
281 282 3.343941 AATGCCGCAAAGACCTACTAA 57.656 42.857 0.00 0.00 0.00 2.24
282 283 3.006940 CAAATGCCGCAAAGACCTACTA 58.993 45.455 0.00 0.00 0.00 1.82
283 284 1.812571 CAAATGCCGCAAAGACCTACT 59.187 47.619 0.00 0.00 0.00 2.57
284 285 1.135402 CCAAATGCCGCAAAGACCTAC 60.135 52.381 0.00 0.00 0.00 3.18
285 286 1.173043 CCAAATGCCGCAAAGACCTA 58.827 50.000 0.00 0.00 0.00 3.08
286 287 1.966762 CCAAATGCCGCAAAGACCT 59.033 52.632 0.00 0.00 0.00 3.85
287 288 1.737735 GCCAAATGCCGCAAAGACC 60.738 57.895 0.00 0.00 0.00 3.85
288 289 2.088178 CGCCAAATGCCGCAAAGAC 61.088 57.895 0.00 0.00 36.24 3.01
289 290 2.257980 CGCCAAATGCCGCAAAGA 59.742 55.556 0.00 0.00 36.24 2.52
290 291 3.481024 GCGCCAAATGCCGCAAAG 61.481 61.111 3.71 0.00 38.69 2.77
291 292 4.290710 TGCGCCAAATGCCGCAAA 62.291 55.556 9.13 0.00 43.15 3.68
294 295 4.722855 AGTTGCGCCAAATGCCGC 62.723 61.111 4.18 1.36 39.09 6.53
295 296 2.806198 CAGTTGCGCCAAATGCCG 60.806 61.111 4.18 0.00 32.96 5.69
296 297 2.432972 CCAGTTGCGCCAAATGCC 60.433 61.111 4.18 0.00 37.98 4.40
297 298 1.734117 GACCAGTTGCGCCAAATGC 60.734 57.895 4.18 0.00 37.98 3.56
298 299 0.031857 TTGACCAGTTGCGCCAAATG 59.968 50.000 4.18 8.94 38.85 2.32
299 300 0.031994 GTTGACCAGTTGCGCCAAAT 59.968 50.000 4.18 0.00 0.00 2.32
300 301 1.435515 GTTGACCAGTTGCGCCAAA 59.564 52.632 4.18 0.00 0.00 3.28
301 302 2.829206 CGTTGACCAGTTGCGCCAA 61.829 57.895 4.18 0.00 0.00 4.52
302 303 2.646117 TACGTTGACCAGTTGCGCCA 62.646 55.000 4.18 0.00 0.00 5.69
303 304 1.296056 ATACGTTGACCAGTTGCGCC 61.296 55.000 4.18 0.00 0.00 6.53
304 305 0.094730 GATACGTTGACCAGTTGCGC 59.905 55.000 0.00 0.00 0.00 6.09
305 306 1.390123 CAGATACGTTGACCAGTTGCG 59.610 52.381 0.00 0.00 0.00 4.85
306 307 2.683968 TCAGATACGTTGACCAGTTGC 58.316 47.619 0.00 0.00 0.00 4.17
307 308 5.666969 TTTTCAGATACGTTGACCAGTTG 57.333 39.130 0.00 0.00 0.00 3.16
332 333 4.529109 CGAGAGGGGGATTCTATTCTTC 57.471 50.000 0.00 0.00 0.00 2.87
357 358 7.593825 CGTGATGAGTGGTATAGATGATACAA 58.406 38.462 0.00 0.00 42.11 2.41
368 369 3.329386 GCATATGCGTGATGAGTGGTAT 58.671 45.455 12.82 0.00 0.00 2.73
369 370 2.547855 GGCATATGCGTGATGAGTGGTA 60.548 50.000 21.04 0.00 43.26 3.25
370 371 1.586422 GCATATGCGTGATGAGTGGT 58.414 50.000 12.82 0.00 0.00 4.16
371 372 0.870393 GGCATATGCGTGATGAGTGG 59.130 55.000 21.04 0.00 43.26 4.00
372 373 0.509929 CGGCATATGCGTGATGAGTG 59.490 55.000 21.04 0.00 43.26 3.51
373 374 0.389025 TCGGCATATGCGTGATGAGT 59.611 50.000 21.04 0.00 43.26 3.41
374 375 1.718396 ATCGGCATATGCGTGATGAG 58.282 50.000 24.85 10.81 43.26 2.90
375 376 3.912899 ATCGGCATATGCGTGATGA 57.087 47.368 24.85 16.38 43.26 2.92
376 377 3.961570 CATCGGCATATGCGTGATG 57.038 52.632 30.64 30.64 43.20 3.07
377 378 2.741759 TACATCGGCATATGCGTGAT 57.258 45.000 24.26 23.03 43.26 3.06
378 379 2.029470 TGATACATCGGCATATGCGTGA 60.029 45.455 24.26 22.10 43.26 4.35
379 380 2.336667 TGATACATCGGCATATGCGTG 58.663 47.619 21.04 19.77 43.26 5.34
380 381 2.741759 TGATACATCGGCATATGCGT 57.258 45.000 21.04 15.13 43.26 5.24
381 382 4.604843 AAATGATACATCGGCATATGCG 57.395 40.909 21.04 15.85 43.26 4.73
382 383 7.226523 TGGTATAAATGATACATCGGCATATGC 59.773 37.037 19.79 19.79 42.11 3.14
383 384 8.551205 GTGGTATAAATGATACATCGGCATATG 58.449 37.037 0.00 0.00 42.11 1.78
384 385 8.486210 AGTGGTATAAATGATACATCGGCATAT 58.514 33.333 0.00 0.00 42.11 1.78
385 386 7.847096 AGTGGTATAAATGATACATCGGCATA 58.153 34.615 0.00 0.00 42.11 3.14
386 387 6.711277 AGTGGTATAAATGATACATCGGCAT 58.289 36.000 0.00 0.00 42.11 4.40
387 388 6.109156 AGTGGTATAAATGATACATCGGCA 57.891 37.500 0.00 0.00 42.11 5.69
388 389 6.163476 TGAGTGGTATAAATGATACATCGGC 58.837 40.000 0.00 0.00 42.11 5.54
389 390 8.034804 TGATGAGTGGTATAAATGATACATCGG 58.965 37.037 0.00 0.00 42.11 4.18
390 391 8.864024 GTGATGAGTGGTATAAATGATACATCG 58.136 37.037 0.00 0.00 42.11 3.84
391 392 8.864024 CGTGATGAGTGGTATAAATGATACATC 58.136 37.037 0.00 0.00 42.11 3.06
392 393 7.331934 GCGTGATGAGTGGTATAAATGATACAT 59.668 37.037 0.00 0.00 42.11 2.29
393 394 6.645003 GCGTGATGAGTGGTATAAATGATACA 59.355 38.462 0.00 0.00 42.11 2.29
394 395 6.645003 TGCGTGATGAGTGGTATAAATGATAC 59.355 38.462 0.00 0.00 39.93 2.24
395 396 6.754193 TGCGTGATGAGTGGTATAAATGATA 58.246 36.000 0.00 0.00 0.00 2.15
396 397 5.610398 TGCGTGATGAGTGGTATAAATGAT 58.390 37.500 0.00 0.00 0.00 2.45
397 398 5.017294 TGCGTGATGAGTGGTATAAATGA 57.983 39.130 0.00 0.00 0.00 2.57
398 399 5.929697 ATGCGTGATGAGTGGTATAAATG 57.070 39.130 0.00 0.00 0.00 2.32
399 400 5.277974 GCAATGCGTGATGAGTGGTATAAAT 60.278 40.000 0.00 0.00 0.00 1.40
400 401 4.035091 GCAATGCGTGATGAGTGGTATAAA 59.965 41.667 0.00 0.00 0.00 1.40
401 402 3.559655 GCAATGCGTGATGAGTGGTATAA 59.440 43.478 0.00 0.00 0.00 0.98
402 403 3.130633 GCAATGCGTGATGAGTGGTATA 58.869 45.455 0.00 0.00 0.00 1.47
443 444 0.251209 GGGTTTTTCGCTTCCTCCCT 60.251 55.000 0.00 0.00 0.00 4.20
444 445 0.538746 TGGGTTTTTCGCTTCCTCCC 60.539 55.000 0.00 0.00 0.00 4.30
473 474 4.237207 GGGGAGGCGGATCCGTTC 62.237 72.222 33.33 28.04 40.56 3.95
503 504 0.537828 GGGAGTGGGTGGCGTTAAAA 60.538 55.000 0.00 0.00 0.00 1.52
550 551 1.153127 GGTGTGTGGGTTCGGTTCA 60.153 57.895 0.00 0.00 0.00 3.18
652 659 4.136978 GGAGAGGGTGAAGCTCCA 57.863 61.111 0.00 0.00 45.89 3.86
970 977 5.054477 CGTCTTACAAAGAAAAGTCTCCCA 58.946 41.667 0.00 0.00 39.67 4.37
1569 1742 5.951747 CCAGATCCCTAAAATCCTCAAACAA 59.048 40.000 0.00 0.00 0.00 2.83
1642 1815 2.863401 ACAGACGGAAAAACCTTTGC 57.137 45.000 0.00 0.00 36.31 3.68
1644 1817 9.304731 GTTAATTTAACAGACGGAAAAACCTTT 57.695 29.630 13.23 0.00 38.52 3.11
1725 1898 3.391506 AAAGGCAGCTTTGTTGGATTC 57.608 42.857 0.00 0.00 0.00 2.52
1890 2066 9.658799 TTCAAAAATTATCTCTGTACTCTCCTG 57.341 33.333 0.00 0.00 0.00 3.86
2096 2292 2.624838 CCCCAGCGATGCTATTTGAAAT 59.375 45.455 0.00 0.00 36.40 2.17
2098 2294 1.679139 CCCCAGCGATGCTATTTGAA 58.321 50.000 0.00 0.00 36.40 2.69
2099 2295 0.179020 CCCCCAGCGATGCTATTTGA 60.179 55.000 0.00 0.00 36.40 2.69
2125 2321 4.204799 GGTTATTCAAGATACACCCCACC 58.795 47.826 0.00 0.00 0.00 4.61
2348 2827 0.455815 GGCGCCCTTCATTTAGTTGG 59.544 55.000 18.11 0.00 0.00 3.77
2602 3081 5.862924 TTCAGCACTAAGAATACACAAGC 57.137 39.130 0.00 0.00 0.00 4.01
2611 3090 5.586243 GGTATCAGCAATTCAGCACTAAGAA 59.414 40.000 0.00 0.00 36.85 2.52
2849 3328 7.510549 AAGTAAGCTAAAGTGCAATCTGAAA 57.489 32.000 0.00 0.00 34.99 2.69
2867 3346 6.760291 ACTAGGAGGTTCTGTGAAAAGTAAG 58.240 40.000 0.00 0.00 0.00 2.34
3030 3545 6.122277 ACTTCAATGAAACTGAGGAAGTCAA 58.878 36.000 0.00 0.00 40.47 3.18
3352 3867 3.317993 TGTAGCCTTTCTCAAAAACCAGC 59.682 43.478 0.00 0.00 0.00 4.85
3365 3880 3.525199 AGATCATTCAGGGTGTAGCCTTT 59.475 43.478 0.00 0.00 37.43 3.11
3371 3886 1.490490 GGCCAGATCATTCAGGGTGTA 59.510 52.381 0.00 0.00 0.00 2.90
3630 4145 0.394192 CCAGCAGTTCCTGACTCACA 59.606 55.000 0.00 0.00 36.10 3.58
3758 4273 0.539669 TGCTTCCGACAGAGAGACCA 60.540 55.000 0.00 0.00 0.00 4.02
3765 4280 1.069090 AAAGCGTGCTTCCGACAGA 59.931 52.632 7.67 0.00 34.84 3.41
3848 4363 3.962063 AGGTGCATAAATGGCATCATCAA 59.038 39.130 0.00 0.00 44.77 2.57
3855 4370 1.473258 GGACAGGTGCATAAATGGCA 58.527 50.000 0.00 0.00 39.32 4.92
3954 4469 1.511305 GACGATGAAGACCTCGGCA 59.489 57.895 0.00 0.00 40.81 5.69
4012 4528 5.699097 TTATTAAGACCAGCAACCACAAC 57.301 39.130 0.00 0.00 0.00 3.32
4036 4552 2.092753 AGGCAGTTCGATCACATGGATT 60.093 45.455 0.00 0.00 36.00 3.01
4042 4558 0.320683 CACCAGGCAGTTCGATCACA 60.321 55.000 0.00 0.00 0.00 3.58
4082 4598 4.838423 TCCACAGGAGAGAAACAGATAACA 59.162 41.667 0.00 0.00 0.00 2.41
4160 4686 4.614535 GCCAAGCAACAGAAAGAGTACATG 60.615 45.833 0.00 0.00 0.00 3.21
4161 4687 3.503748 GCCAAGCAACAGAAAGAGTACAT 59.496 43.478 0.00 0.00 0.00 2.29
4162 4688 2.878406 GCCAAGCAACAGAAAGAGTACA 59.122 45.455 0.00 0.00 0.00 2.90
4163 4689 2.878406 TGCCAAGCAACAGAAAGAGTAC 59.122 45.455 0.00 0.00 34.76 2.73
4164 4690 2.878406 GTGCCAAGCAACAGAAAGAGTA 59.122 45.455 0.00 0.00 41.47 2.59
4165 4691 1.678101 GTGCCAAGCAACAGAAAGAGT 59.322 47.619 0.00 0.00 41.47 3.24
4166 4692 1.000938 GGTGCCAAGCAACAGAAAGAG 60.001 52.381 0.00 0.00 46.68 2.85
4167 4693 1.032014 GGTGCCAAGCAACAGAAAGA 58.968 50.000 0.00 0.00 46.68 2.52
4168 4694 3.575399 GGTGCCAAGCAACAGAAAG 57.425 52.632 0.00 0.00 46.68 2.62
4217 4743 6.660722 ACGACGATGAAACAGATACTCTATC 58.339 40.000 0.00 0.00 35.41 2.08
4219 4745 6.432607 AACGACGATGAAACAGATACTCTA 57.567 37.500 0.00 0.00 0.00 2.43
4220 4746 4.966965 ACGACGATGAAACAGATACTCT 57.033 40.909 0.00 0.00 0.00 3.24
4221 4747 5.571741 TGAAACGACGATGAAACAGATACTC 59.428 40.000 0.00 0.00 0.00 2.59
4222 4748 5.466819 TGAAACGACGATGAAACAGATACT 58.533 37.500 0.00 0.00 0.00 2.12
4223 4749 5.756950 TGAAACGACGATGAAACAGATAC 57.243 39.130 0.00 0.00 0.00 2.24
4237 4763 1.668751 TGTTGCACTCCTTGAAACGAC 59.331 47.619 0.00 0.00 46.04 4.34
4249 4775 5.470098 CCAAGTATAGACAAACTGTTGCACT 59.530 40.000 0.00 0.00 38.39 4.40
4269 4795 8.765219 GTGCTAGTGAACATATATACAACCAAG 58.235 37.037 0.00 0.00 0.00 3.61
4302 4828 3.130869 ACTTCTTCAGTTGCAATGCACAA 59.869 39.130 7.72 0.00 38.71 3.33
4303 4829 2.689471 ACTTCTTCAGTTGCAATGCACA 59.311 40.909 7.72 0.00 38.71 4.57
4308 4834 5.769662 TGTCCATTACTTCTTCAGTTGCAAT 59.230 36.000 0.59 0.00 36.88 3.56
4316 4842 4.455533 GTGTGCATGTCCATTACTTCTTCA 59.544 41.667 0.00 0.00 0.00 3.02
4317 4843 4.142600 GGTGTGCATGTCCATTACTTCTTC 60.143 45.833 0.00 0.00 0.00 2.87
4328 4854 2.818130 ACATTTTGGTGTGCATGTCC 57.182 45.000 0.00 0.00 0.00 4.02
4335 4861 8.288913 TCGCATTGATATATACATTTTGGTGTG 58.711 33.333 0.00 0.00 33.62 3.82
4349 4875 4.425520 TGTTGTCGTGTCGCATTGATATA 58.574 39.130 0.00 0.00 0.00 0.86
4350 4876 3.258228 TGTTGTCGTGTCGCATTGATAT 58.742 40.909 0.00 0.00 0.00 1.63
4388 5518 4.803426 GTCTCCCTGCTGCCGTCG 62.803 72.222 0.00 0.00 0.00 5.12
4410 5540 4.479786 AGGAGTAGATTTCAACCTCAGC 57.520 45.455 0.00 0.00 0.00 4.26
4412 5542 4.225267 GGGAAGGAGTAGATTTCAACCTCA 59.775 45.833 0.00 0.00 0.00 3.86
4413 5543 4.471747 AGGGAAGGAGTAGATTTCAACCTC 59.528 45.833 0.00 0.00 0.00 3.85
4475 5605 5.178252 CCGGAGTACATCAATCTTGCATTAG 59.822 44.000 0.00 0.00 0.00 1.73
4563 5693 2.304751 ACGGCTTTGGGAGTAATACG 57.695 50.000 0.00 0.00 0.00 3.06
4590 5720 7.851387 TTTACATGTATGGTCGCTTCAATAA 57.149 32.000 6.36 0.00 0.00 1.40
4611 5741 6.183360 GGCCCGAAATAAGATTGTTGGATTTA 60.183 38.462 0.00 0.00 0.00 1.40
4738 5876 9.308000 CCCCATTAAATTGGCTAGATATGTTAA 57.692 33.333 0.00 0.00 35.29 2.01
4739 5877 8.452868 ACCCCATTAAATTGGCTAGATATGTTA 58.547 33.333 0.00 0.00 35.29 2.41
4740 5878 7.305246 ACCCCATTAAATTGGCTAGATATGTT 58.695 34.615 0.00 0.00 35.29 2.71
4741 5879 6.863322 ACCCCATTAAATTGGCTAGATATGT 58.137 36.000 0.00 0.00 35.29 2.29
4742 5880 8.877864 TTACCCCATTAAATTGGCTAGATATG 57.122 34.615 0.00 0.00 35.29 1.78
4743 5881 9.533831 CTTTACCCCATTAAATTGGCTAGATAT 57.466 33.333 0.00 0.00 35.29 1.63
4744 5882 7.450323 GCTTTACCCCATTAAATTGGCTAGATA 59.550 37.037 0.00 0.00 35.29 1.98
4745 5883 6.267699 GCTTTACCCCATTAAATTGGCTAGAT 59.732 38.462 0.00 0.00 35.29 1.98
4746 5884 5.596772 GCTTTACCCCATTAAATTGGCTAGA 59.403 40.000 0.00 0.00 35.29 2.43
4747 5885 5.362430 TGCTTTACCCCATTAAATTGGCTAG 59.638 40.000 0.00 0.00 35.29 3.42
4748 5886 5.273208 TGCTTTACCCCATTAAATTGGCTA 58.727 37.500 0.00 0.00 35.29 3.93
4749 5887 4.100373 TGCTTTACCCCATTAAATTGGCT 58.900 39.130 0.00 0.00 35.29 4.75
4750 5888 4.479786 TGCTTTACCCCATTAAATTGGC 57.520 40.909 0.00 0.00 35.29 4.52
4754 5892 9.969001 ACGTATATATGCTTTACCCCATTAAAT 57.031 29.630 1.65 0.00 0.00 1.40
4758 5896 9.609346 GAATACGTATATATGCTTTACCCCATT 57.391 33.333 8.83 0.00 0.00 3.16
4759 5897 7.924412 CGAATACGTATATATGCTTTACCCCAT 59.076 37.037 8.83 0.00 34.56 4.00
4760 5898 7.259882 CGAATACGTATATATGCTTTACCCCA 58.740 38.462 8.83 0.00 34.56 4.96
4761 5899 6.199719 GCGAATACGTATATATGCTTTACCCC 59.800 42.308 8.83 0.00 41.98 4.95
4762 5900 6.976925 AGCGAATACGTATATATGCTTTACCC 59.023 38.462 8.83 0.00 41.98 3.69
4763 5901 7.982371 AGCGAATACGTATATATGCTTTACC 57.018 36.000 8.83 0.00 41.98 2.85
4764 5902 9.713740 AGTAGCGAATACGTATATATGCTTTAC 57.286 33.333 21.14 16.23 39.55 2.01
4765 5903 9.926751 GAGTAGCGAATACGTATATATGCTTTA 57.073 33.333 21.14 8.45 39.55 1.85
4766 5904 7.914346 GGAGTAGCGAATACGTATATATGCTTT 59.086 37.037 21.14 13.79 39.55 3.51
4767 5905 7.282675 AGGAGTAGCGAATACGTATATATGCTT 59.717 37.037 21.14 10.29 39.55 3.91
4768 5906 6.766944 AGGAGTAGCGAATACGTATATATGCT 59.233 38.462 20.31 20.31 39.55 3.79
4769 5907 6.957150 AGGAGTAGCGAATACGTATATATGC 58.043 40.000 8.83 10.31 39.55 3.14
4770 5908 9.861138 GTAAGGAGTAGCGAATACGTATATATG 57.139 37.037 8.83 0.12 39.55 1.78
4771 5909 9.829507 AGTAAGGAGTAGCGAATACGTATATAT 57.170 33.333 8.83 0.00 39.55 0.86
4772 5910 9.307121 GAGTAAGGAGTAGCGAATACGTATATA 57.693 37.037 8.83 0.00 39.55 0.86
4773 5911 7.279758 GGAGTAAGGAGTAGCGAATACGTATAT 59.720 40.741 8.83 0.00 39.55 0.86
4774 5912 6.591834 GGAGTAAGGAGTAGCGAATACGTATA 59.408 42.308 8.83 0.00 39.55 1.47
4775 5913 5.411053 GGAGTAAGGAGTAGCGAATACGTAT 59.589 44.000 1.14 1.14 39.55 3.06
4776 5914 4.752101 GGAGTAAGGAGTAGCGAATACGTA 59.248 45.833 0.00 0.00 39.55 3.57
4777 5915 3.563390 GGAGTAAGGAGTAGCGAATACGT 59.437 47.826 0.00 0.00 39.55 3.57
4778 5916 3.363772 CGGAGTAAGGAGTAGCGAATACG 60.364 52.174 0.00 0.00 39.55 3.06
4779 5917 3.608941 GCGGAGTAAGGAGTAGCGAATAC 60.609 52.174 0.00 0.00 34.30 1.89
4780 5918 2.551459 GCGGAGTAAGGAGTAGCGAATA 59.449 50.000 0.00 0.00 0.00 1.75
4781 5919 1.337387 GCGGAGTAAGGAGTAGCGAAT 59.663 52.381 0.00 0.00 0.00 3.34
4782 5920 0.737219 GCGGAGTAAGGAGTAGCGAA 59.263 55.000 0.00 0.00 0.00 4.70
4783 5921 0.393402 TGCGGAGTAAGGAGTAGCGA 60.393 55.000 0.00 0.00 0.00 4.93
4784 5922 0.029567 CTGCGGAGTAAGGAGTAGCG 59.970 60.000 0.00 0.00 0.00 4.26
4785 5923 1.390565 TCTGCGGAGTAAGGAGTAGC 58.609 55.000 3.10 0.00 0.00 3.58
4786 5924 4.451629 TTTTCTGCGGAGTAAGGAGTAG 57.548 45.455 3.10 0.00 0.00 2.57
4787 5925 4.877378 TTTTTCTGCGGAGTAAGGAGTA 57.123 40.909 3.10 0.00 0.00 2.59
4788 5926 3.764237 TTTTTCTGCGGAGTAAGGAGT 57.236 42.857 3.10 0.00 0.00 3.85
4805 5943 4.510571 GAAGGCCATCATTGCATCTTTTT 58.489 39.130 5.01 0.00 0.00 1.94
4806 5944 3.118519 GGAAGGCCATCATTGCATCTTTT 60.119 43.478 10.67 0.00 0.00 2.27
4807 5945 2.433239 GGAAGGCCATCATTGCATCTTT 59.567 45.455 10.67 0.00 0.00 2.52
4808 5946 2.037144 GGAAGGCCATCATTGCATCTT 58.963 47.619 10.67 0.00 0.00 2.40
4809 5947 1.217183 AGGAAGGCCATCATTGCATCT 59.783 47.619 10.67 0.00 36.29 2.90
4810 5948 1.700955 AGGAAGGCCATCATTGCATC 58.299 50.000 10.67 0.00 36.29 3.91
4811 5949 3.228453 CTTAGGAAGGCCATCATTGCAT 58.772 45.455 10.67 0.00 36.29 3.96
4812 5950 2.658285 CTTAGGAAGGCCATCATTGCA 58.342 47.619 10.67 0.00 36.29 4.08
4813 5951 1.959282 CCTTAGGAAGGCCATCATTGC 59.041 52.381 10.67 0.00 42.78 3.56
4824 5962 4.868734 CCGTTTACAACTAGCCTTAGGAAG 59.131 45.833 0.69 0.46 0.00 3.46
4825 5963 4.322953 CCCGTTTACAACTAGCCTTAGGAA 60.323 45.833 0.69 0.00 0.00 3.36
4826 5964 3.196254 CCCGTTTACAACTAGCCTTAGGA 59.804 47.826 0.69 0.00 0.00 2.94
4827 5965 3.196254 TCCCGTTTACAACTAGCCTTAGG 59.804 47.826 0.00 0.00 0.00 2.69
4828 5966 4.081807 ACTCCCGTTTACAACTAGCCTTAG 60.082 45.833 0.00 0.00 0.00 2.18
4829 5967 3.834231 ACTCCCGTTTACAACTAGCCTTA 59.166 43.478 0.00 0.00 0.00 2.69
4830 5968 2.636403 ACTCCCGTTTACAACTAGCCTT 59.364 45.455 0.00 0.00 0.00 4.35
4831 5969 2.254508 ACTCCCGTTTACAACTAGCCT 58.745 47.619 0.00 0.00 0.00 4.58
4832 5970 2.756840 ACTCCCGTTTACAACTAGCC 57.243 50.000 0.00 0.00 0.00 3.93
4833 5971 5.002464 TGATACTCCCGTTTACAACTAGC 57.998 43.478 0.00 0.00 0.00 3.42
4874 6012 9.835389 GGAGGTAGTATTATAGACGAGTATCAT 57.165 37.037 0.00 0.00 33.17 2.45
4875 6013 8.263640 GGGAGGTAGTATTATAGACGAGTATCA 58.736 40.741 0.00 0.00 33.17 2.15
4876 6014 8.485392 AGGGAGGTAGTATTATAGACGAGTATC 58.515 40.741 0.00 0.00 0.00 2.24
4877 6015 8.391305 AGGGAGGTAGTATTATAGACGAGTAT 57.609 38.462 0.00 0.00 0.00 2.12
4878 6016 7.805083 AGGGAGGTAGTATTATAGACGAGTA 57.195 40.000 0.00 0.00 0.00 2.59
4879 6017 6.700845 AGGGAGGTAGTATTATAGACGAGT 57.299 41.667 0.00 0.00 0.00 4.18
4880 6018 9.111613 CATTAGGGAGGTAGTATTATAGACGAG 57.888 40.741 0.00 0.00 0.00 4.18
4881 6019 7.555554 GCATTAGGGAGGTAGTATTATAGACGA 59.444 40.741 0.00 0.00 0.00 4.20
4882 6020 7.338703 TGCATTAGGGAGGTAGTATTATAGACG 59.661 40.741 0.00 0.00 0.00 4.18
4883 6021 8.591114 TGCATTAGGGAGGTAGTATTATAGAC 57.409 38.462 0.00 0.00 0.00 2.59
4889 6027 9.562226 AATACTATGCATTAGGGAGGTAGTATT 57.438 33.333 3.54 11.64 38.26 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.