Multiple sequence alignment - TraesCS5B01G110400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G110400 chr5B 100.000 6375 0 0 1 6375 159711033 159717407 0.000000e+00 11773.0
1 TraesCS5B01G110400 chr5B 97.736 265 5 1 3690 3954 536476161 536475898 7.530000e-124 455.0
2 TraesCS5B01G110400 chr5B 97.348 264 7 0 3689 3952 269497577 269497840 3.510000e-122 449.0
3 TraesCS5B01G110400 chr5B 97.348 264 7 0 3689 3952 687199258 687198995 3.510000e-122 449.0
4 TraesCS5B01G110400 chr5B 97.004 267 8 0 3690 3956 704984253 704984519 3.510000e-122 449.0
5 TraesCS5B01G110400 chr5B 83.846 130 19 2 6005 6133 538291228 538291356 8.680000e-24 122.0
6 TraesCS5B01G110400 chr5A 98.830 2223 23 2 412 2634 207659207 207656988 0.000000e+00 3958.0
7 TraesCS5B01G110400 chr5A 92.817 2311 84 32 4128 6375 207656995 207654704 0.000000e+00 3273.0
8 TraesCS5B01G110400 chr5A 97.727 264 6 0 3690 3953 463746468 463746731 7.530000e-124 455.0
9 TraesCS5B01G110400 chr5A 76.835 695 98 24 5710 6375 139688446 139687786 3.680000e-87 333.0
10 TraesCS5B01G110400 chr5D 98.650 2223 27 2 412 2634 158169920 158167701 0.000000e+00 3936.0
11 TraesCS5B01G110400 chr5D 97.794 1405 24 2 4128 5526 158167708 158166305 0.000000e+00 2416.0
12 TraesCS5B01G110400 chr5D 90.186 377 20 5 5525 5886 158166221 158165847 5.780000e-130 475.0
13 TraesCS5B01G110400 chr5D 88.854 314 24 4 6072 6375 158165510 158165198 6.030000e-100 375.0
14 TraesCS5B01G110400 chr5D 75.034 729 97 40 5710 6375 262843108 262843814 6.340000e-65 259.0
15 TraesCS5B01G110400 chr5D 78.035 173 24 10 5725 5885 493830909 493830739 5.260000e-16 97.1
16 TraesCS5B01G110400 chr2A 88.374 1101 70 23 2636 3692 723619024 723620110 0.000000e+00 1271.0
17 TraesCS5B01G110400 chr2A 88.283 1101 71 23 2636 3692 723653189 723654275 0.000000e+00 1266.0
18 TraesCS5B01G110400 chr2A 94.375 160 8 1 3969 4127 723620119 723620278 1.780000e-60 244.0
19 TraesCS5B01G110400 chr2A 93.252 163 8 3 3969 4129 723654284 723654445 2.970000e-58 237.0
20 TraesCS5B01G110400 chr3B 88.022 1102 74 20 2635 3692 160758827 160759914 0.000000e+00 1251.0
21 TraesCS5B01G110400 chr3B 78.390 671 86 29 5710 6375 445251477 445252093 1.300000e-101 381.0
22 TraesCS5B01G110400 chr3B 74.856 871 171 36 2706 3557 166532219 166531378 1.020000e-92 351.0
23 TraesCS5B01G110400 chr3B 82.812 128 21 1 5710 5837 659994320 659994446 5.220000e-21 113.0
24 TraesCS5B01G110400 chr3B 92.453 53 4 0 4075 4127 23152011 23152063 6.850000e-10 76.8
25 TraesCS5B01G110400 chr3A 87.851 1103 76 21 2634 3692 14809443 14808355 0.000000e+00 1242.0
26 TraesCS5B01G110400 chr3A 78.230 712 95 19 5710 6375 27036452 27035755 9.960000e-108 401.0
27 TraesCS5B01G110400 chr3A 81.548 504 63 12 5884 6375 25538365 25537880 7.750000e-104 388.0
28 TraesCS5B01G110400 chr3A 93.082 159 11 0 3969 4127 14808346 14808188 3.840000e-57 233.0
29 TraesCS5B01G110400 chr3A 85.833 120 12 4 5711 5828 51755776 51755660 8.680000e-24 122.0
30 TraesCS5B01G110400 chr3A 76.796 181 30 6 5710 5879 444499677 444499856 2.450000e-14 91.6
31 TraesCS5B01G110400 chr3A 97.959 49 1 0 2634 2682 12155264 12155312 1.140000e-12 86.1
32 TraesCS5B01G110400 chr3A 97.917 48 1 0 2635 2682 709896850 709896803 4.100000e-12 84.2
33 TraesCS5B01G110400 chr3A 97.917 48 1 0 2635 2682 709924846 709924799 4.100000e-12 84.2
34 TraesCS5B01G110400 chr7B 98.106 264 5 0 3689 3952 102756358 102756095 1.620000e-125 460.0
35 TraesCS5B01G110400 chr4A 97.736 265 6 0 3689 3953 666841474 666841738 2.090000e-124 457.0
36 TraesCS5B01G110400 chr4A 97.736 265 6 0 3689 3953 666844967 666845231 2.090000e-124 457.0
37 TraesCS5B01G110400 chr1B 97.719 263 5 1 3690 3952 608367220 608366959 9.750000e-123 451.0
38 TraesCS5B01G110400 chr1B 100.000 33 0 0 2509 2541 606845918 606845886 1.920000e-05 62.1
39 TraesCS5B01G110400 chr6A 77.110 699 89 28 5710 6375 258466 257806 7.920000e-89 339.0
40 TraesCS5B01G110400 chr2D 76.596 705 92 35 5710 6375 517893749 517893079 2.870000e-83 320.0
41 TraesCS5B01G110400 chr2D 85.083 181 22 5 3954 4132 579974021 579974198 5.080000e-41 180.0
42 TraesCS5B01G110400 chr2D 84.916 179 22 5 3954 4130 298934329 298934504 6.570000e-40 176.0
43 TraesCS5B01G110400 chr2D 81.325 166 26 3 5725 5885 220660047 220659882 5.190000e-26 130.0
44 TraesCS5B01G110400 chr2D 94.872 39 2 0 251 289 592088134 592088096 1.920000e-05 62.1
45 TraesCS5B01G110400 chr3D 79.592 490 63 17 5890 6366 488276981 488276516 3.710000e-82 316.0
46 TraesCS5B01G110400 chr3D 84.298 121 13 5 5710 5828 31443890 31444006 5.220000e-21 113.0
47 TraesCS5B01G110400 chr4D 78.068 497 76 21 5885 6375 331627117 331626648 3.760000e-72 283.0
48 TraesCS5B01G110400 chr4B 76.707 498 80 20 5885 6375 409773029 409773497 1.780000e-60 244.0
49 TraesCS5B01G110400 chr4B 74.363 706 112 40 5710 6375 412180494 412179818 2.970000e-58 237.0
50 TraesCS5B01G110400 chr7A 78.218 303 53 6 6086 6375 245464898 245465200 1.410000e-41 182.0
51 TraesCS5B01G110400 chr7A 84.659 176 23 4 3954 4127 696575291 696575464 8.500000e-39 172.0
52 TraesCS5B01G110400 chr7A 80.233 172 22 7 5725 5885 685450100 685449930 1.120000e-22 119.0
53 TraesCS5B01G110400 chr6B 81.143 175 21 8 5710 5873 485289836 485289663 5.190000e-26 130.0
54 TraesCS5B01G110400 chr6B 92.453 53 4 0 4075 4127 155208829 155208881 6.850000e-10 76.8
55 TraesCS5B01G110400 chr6B 100.000 28 0 0 2516 2543 601875536 601875563 1.200000e-02 52.8
56 TraesCS5B01G110400 chr6D 97.917 48 1 0 2635 2682 278934496 278934449 4.100000e-12 84.2
57 TraesCS5B01G110400 chr6D 100.000 28 0 0 2516 2543 401302533 401302560 1.200000e-02 52.8
58 TraesCS5B01G110400 chr2B 93.878 49 3 0 4075 4123 453724980 453724932 2.470000e-09 75.0
59 TraesCS5B01G110400 chr2B 97.674 43 1 0 2640 2682 586771180 586771222 2.470000e-09 75.0
60 TraesCS5B01G110400 chr1A 100.000 33 0 0 2509 2541 541387887 541387855 1.920000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G110400 chr5B 159711033 159717407 6374 False 11773.0 11773 100.0000 1 6375 1 chr5B.!!$F1 6374
1 TraesCS5B01G110400 chr5A 207654704 207659207 4503 True 3615.5 3958 95.8235 412 6375 2 chr5A.!!$R2 5963
2 TraesCS5B01G110400 chr5A 139687786 139688446 660 True 333.0 333 76.8350 5710 6375 1 chr5A.!!$R1 665
3 TraesCS5B01G110400 chr5D 158165198 158169920 4722 True 1800.5 3936 93.8710 412 6375 4 chr5D.!!$R2 5963
4 TraesCS5B01G110400 chr5D 262843108 262843814 706 False 259.0 259 75.0340 5710 6375 1 chr5D.!!$F1 665
5 TraesCS5B01G110400 chr2A 723619024 723620278 1254 False 757.5 1271 91.3745 2636 4127 2 chr2A.!!$F1 1491
6 TraesCS5B01G110400 chr2A 723653189 723654445 1256 False 751.5 1266 90.7675 2636 4129 2 chr2A.!!$F2 1493
7 TraesCS5B01G110400 chr3B 160758827 160759914 1087 False 1251.0 1251 88.0220 2635 3692 1 chr3B.!!$F2 1057
8 TraesCS5B01G110400 chr3B 445251477 445252093 616 False 381.0 381 78.3900 5710 6375 1 chr3B.!!$F3 665
9 TraesCS5B01G110400 chr3B 166531378 166532219 841 True 351.0 351 74.8560 2706 3557 1 chr3B.!!$R1 851
10 TraesCS5B01G110400 chr3A 14808188 14809443 1255 True 737.5 1242 90.4665 2634 4127 2 chr3A.!!$R6 1493
11 TraesCS5B01G110400 chr3A 27035755 27036452 697 True 401.0 401 78.2300 5710 6375 1 chr3A.!!$R2 665
12 TraesCS5B01G110400 chr4A 666841474 666845231 3757 False 457.0 457 97.7360 3689 3953 2 chr4A.!!$F1 264
13 TraesCS5B01G110400 chr6A 257806 258466 660 True 339.0 339 77.1100 5710 6375 1 chr6A.!!$R1 665
14 TraesCS5B01G110400 chr2D 517893079 517893749 670 True 320.0 320 76.5960 5710 6375 1 chr2D.!!$R2 665
15 TraesCS5B01G110400 chr4B 412179818 412180494 676 True 237.0 237 74.3630 5710 6375 1 chr4B.!!$R1 665

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.032952 CCCGTTGAGTTTCACCGAGA 59.967 55.000 0.00 0.00 34.02 4.04 F
233 234 0.038166 GAACCCCAGCTTGGTCATCA 59.962 55.000 5.17 0.00 35.17 3.07 F
369 370 0.038435 TCGCGGACATTGTCGGTTAA 60.038 50.000 21.10 8.21 35.71 2.01 F
388 389 0.250597 AAAGTCTACCCGGCACCAAC 60.251 55.000 0.00 0.00 0.00 3.77 F
399 400 0.317519 GGCACCAACGCACTTTACAC 60.318 55.000 0.00 0.00 0.00 2.90 F
410 411 0.796312 ACTTTACACCAAGCATCGCG 59.204 50.000 0.00 0.00 0.00 5.87 F
693 694 1.619654 TGAGGTCCAATTTGGCACTG 58.380 50.000 10.76 0.00 37.47 3.66 F
2915 2925 2.877786 TCATCTTGCTGAAACGCTGAAA 59.122 40.909 0.00 0.00 0.00 2.69 F
3117 3137 1.003580 TCTTCAATGACCCTCTGTGCC 59.996 52.381 0.00 0.00 0.00 5.01 F
4026 5292 1.104577 TGGGTTCAGCCACGGTTTTC 61.105 55.000 0.00 0.00 39.65 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 1841 4.498241 CTGTCAATCAAGAGGTTCGATCA 58.502 43.478 0.00 0.0 0.00 2.92 R
2340 2343 5.515106 AGCAAGGAGTCTATGAGAACTACT 58.485 41.667 0.00 0.0 0.00 2.57 R
2704 2707 9.813080 GATTGTGTGAAATTAGACTTTACACTC 57.187 33.333 10.64 0.0 38.15 3.51 R
2737 2740 8.454106 TCTTGCTTTTGAGTGCTATAATCTTTC 58.546 33.333 0.00 0.0 0.00 2.62 R
2836 2845 9.649316 GGTCCTGGACTAGCTATAATATCTAAT 57.351 37.037 25.01 0.0 32.47 1.73 R
2892 2901 1.802960 CAGCGTTTCAGCAAGATGAGT 59.197 47.619 0.00 0.0 40.15 3.41 R
3017 3027 5.048013 GCATAAGACCTTTTGTTTAGGCTGT 60.048 40.000 0.00 0.0 36.17 4.40 R
4368 6071 0.604578 ATGGTGATGTTGGCAAGTGC 59.395 50.000 0.00 0.0 41.14 4.40 R
5233 6945 1.836166 CTCCTGAGCTTCCTTCCATGA 59.164 52.381 0.00 0.0 0.00 3.07 R
5953 7892 0.469144 AAAAGGCCAACCACCGTCAT 60.469 50.000 5.01 0.0 39.06 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.730550 CAAAAGCCACACCCTGAATC 57.269 50.000 0.00 0.00 0.00 2.52
20 21 2.242043 CAAAAGCCACACCCTGAATCT 58.758 47.619 0.00 0.00 0.00 2.40
21 22 2.206576 AAAGCCACACCCTGAATCTC 57.793 50.000 0.00 0.00 0.00 2.75
22 23 0.329596 AAGCCACACCCTGAATCTCC 59.670 55.000 0.00 0.00 0.00 3.71
23 24 0.548682 AGCCACACCCTGAATCTCCT 60.549 55.000 0.00 0.00 0.00 3.69
24 25 0.329596 GCCACACCCTGAATCTCCTT 59.670 55.000 0.00 0.00 0.00 3.36
25 26 1.680249 GCCACACCCTGAATCTCCTTC 60.680 57.143 0.00 0.00 0.00 3.46
26 27 1.912043 CCACACCCTGAATCTCCTTCT 59.088 52.381 0.00 0.00 34.75 2.85
27 28 2.093235 CCACACCCTGAATCTCCTTCTC 60.093 54.545 0.00 0.00 34.75 2.87
28 29 2.093235 CACACCCTGAATCTCCTTCTCC 60.093 54.545 0.00 0.00 34.75 3.71
29 30 1.488393 CACCCTGAATCTCCTTCTCCC 59.512 57.143 0.00 0.00 34.75 4.30
30 31 0.755686 CCCTGAATCTCCTTCTCCCG 59.244 60.000 0.00 0.00 34.75 5.14
31 32 0.105778 CCTGAATCTCCTTCTCCCGC 59.894 60.000 0.00 0.00 34.75 6.13
32 33 1.118838 CTGAATCTCCTTCTCCCGCT 58.881 55.000 0.00 0.00 34.75 5.52
33 34 0.826715 TGAATCTCCTTCTCCCGCTG 59.173 55.000 0.00 0.00 34.75 5.18
34 35 0.105778 GAATCTCCTTCTCCCGCTGG 59.894 60.000 0.00 0.00 0.00 4.85
35 36 1.341156 AATCTCCTTCTCCCGCTGGG 61.341 60.000 7.24 7.24 46.11 4.45
36 37 4.168291 CTCCTTCTCCCGCTGGGC 62.168 72.222 8.57 0.00 43.94 5.36
39 40 4.479993 CTTCTCCCGCTGGGCCTG 62.480 72.222 4.53 5.32 43.94 4.85
42 43 4.351054 CTCCCGCTGGGCCTGTTT 62.351 66.667 12.33 0.00 43.94 2.83
43 44 4.344865 TCCCGCTGGGCCTGTTTC 62.345 66.667 12.33 0.00 43.94 2.78
44 45 4.659172 CCCGCTGGGCCTGTTTCA 62.659 66.667 12.33 0.00 35.35 2.69
45 46 2.597217 CCGCTGGGCCTGTTTCAA 60.597 61.111 12.33 0.00 0.00 2.69
46 47 2.199652 CCGCTGGGCCTGTTTCAAA 61.200 57.895 12.33 0.00 0.00 2.69
47 48 1.739049 CGCTGGGCCTGTTTCAAAA 59.261 52.632 12.33 0.00 0.00 2.44
48 49 0.318955 CGCTGGGCCTGTTTCAAAAG 60.319 55.000 12.33 0.00 0.00 2.27
49 50 0.033920 GCTGGGCCTGTTTCAAAAGG 59.966 55.000 12.33 0.00 36.58 3.11
50 51 0.681175 CTGGGCCTGTTTCAAAAGGG 59.319 55.000 4.53 0.00 33.87 3.95
53 54 1.006220 GCCTGTTTCAAAAGGGCCG 60.006 57.895 0.00 0.00 34.15 6.13
54 55 1.460273 GCCTGTTTCAAAAGGGCCGA 61.460 55.000 0.00 0.00 34.15 5.54
55 56 0.598065 CCTGTTTCAAAAGGGCCGAG 59.402 55.000 0.00 0.00 0.00 4.63
56 57 1.604604 CTGTTTCAAAAGGGCCGAGA 58.395 50.000 0.00 0.00 0.00 4.04
57 58 1.953686 CTGTTTCAAAAGGGCCGAGAA 59.046 47.619 0.00 0.00 0.00 2.87
58 59 2.360801 CTGTTTCAAAAGGGCCGAGAAA 59.639 45.455 0.00 4.79 0.00 2.52
59 60 2.100087 TGTTTCAAAAGGGCCGAGAAAC 59.900 45.455 25.29 25.29 44.92 2.78
60 61 1.324383 TTCAAAAGGGCCGAGAAACC 58.676 50.000 0.00 0.00 0.00 3.27
70 71 4.285851 GAGAAACCCTCGCCACAG 57.714 61.111 0.00 0.00 31.32 3.66
71 72 1.671742 GAGAAACCCTCGCCACAGA 59.328 57.895 0.00 0.00 31.32 3.41
72 73 0.034896 GAGAAACCCTCGCCACAGAA 59.965 55.000 0.00 0.00 31.32 3.02
73 74 0.693049 AGAAACCCTCGCCACAGAAT 59.307 50.000 0.00 0.00 0.00 2.40
74 75 1.906574 AGAAACCCTCGCCACAGAATA 59.093 47.619 0.00 0.00 0.00 1.75
75 76 2.304761 AGAAACCCTCGCCACAGAATAA 59.695 45.455 0.00 0.00 0.00 1.40
76 77 2.403252 AACCCTCGCCACAGAATAAG 57.597 50.000 0.00 0.00 0.00 1.73
77 78 1.568504 ACCCTCGCCACAGAATAAGA 58.431 50.000 0.00 0.00 0.00 2.10
78 79 1.906574 ACCCTCGCCACAGAATAAGAA 59.093 47.619 0.00 0.00 0.00 2.52
79 80 2.093447 ACCCTCGCCACAGAATAAGAAG 60.093 50.000 0.00 0.00 0.00 2.85
80 81 2.168521 CCCTCGCCACAGAATAAGAAGA 59.831 50.000 0.00 0.00 0.00 2.87
81 82 3.452474 CCTCGCCACAGAATAAGAAGAG 58.548 50.000 0.00 0.00 0.00 2.85
82 83 3.452474 CTCGCCACAGAATAAGAAGAGG 58.548 50.000 0.00 0.00 0.00 3.69
83 84 2.832129 TCGCCACAGAATAAGAAGAGGT 59.168 45.455 0.00 0.00 0.00 3.85
84 85 4.021229 TCGCCACAGAATAAGAAGAGGTA 58.979 43.478 0.00 0.00 0.00 3.08
85 86 4.464951 TCGCCACAGAATAAGAAGAGGTAA 59.535 41.667 0.00 0.00 0.00 2.85
86 87 4.806247 CGCCACAGAATAAGAAGAGGTAAG 59.194 45.833 0.00 0.00 0.00 2.34
87 88 5.119694 GCCACAGAATAAGAAGAGGTAAGG 58.880 45.833 0.00 0.00 0.00 2.69
88 89 5.104900 GCCACAGAATAAGAAGAGGTAAGGA 60.105 44.000 0.00 0.00 0.00 3.36
89 90 6.578023 CCACAGAATAAGAAGAGGTAAGGAG 58.422 44.000 0.00 0.00 0.00 3.69
90 91 6.381420 CCACAGAATAAGAAGAGGTAAGGAGA 59.619 42.308 0.00 0.00 0.00 3.71
91 92 7.093289 CCACAGAATAAGAAGAGGTAAGGAGAA 60.093 40.741 0.00 0.00 0.00 2.87
92 93 8.314751 CACAGAATAAGAAGAGGTAAGGAGAAA 58.685 37.037 0.00 0.00 0.00 2.52
93 94 9.052365 ACAGAATAAGAAGAGGTAAGGAGAAAT 57.948 33.333 0.00 0.00 0.00 2.17
96 97 9.990360 GAATAAGAAGAGGTAAGGAGAAATAGG 57.010 37.037 0.00 0.00 0.00 2.57
97 98 9.731001 AATAAGAAGAGGTAAGGAGAAATAGGA 57.269 33.333 0.00 0.00 0.00 2.94
98 99 9.906274 ATAAGAAGAGGTAAGGAGAAATAGGAT 57.094 33.333 0.00 0.00 0.00 3.24
99 100 7.849322 AGAAGAGGTAAGGAGAAATAGGATC 57.151 40.000 0.00 0.00 0.00 3.36
100 101 7.601017 AGAAGAGGTAAGGAGAAATAGGATCT 58.399 38.462 0.00 0.00 0.00 2.75
101 102 7.728532 AGAAGAGGTAAGGAGAAATAGGATCTC 59.271 40.741 0.00 0.00 42.09 2.75
108 109 3.658709 GAGAAATAGGATCTCCTTGGCG 58.341 50.000 3.64 0.00 46.09 5.69
109 110 3.041946 AGAAATAGGATCTCCTTGGCGT 58.958 45.455 3.64 0.00 46.09 5.68
110 111 4.223953 AGAAATAGGATCTCCTTGGCGTA 58.776 43.478 3.64 0.00 46.09 4.42
111 112 4.654262 AGAAATAGGATCTCCTTGGCGTAA 59.346 41.667 3.64 0.00 46.09 3.18
112 113 5.130477 AGAAATAGGATCTCCTTGGCGTAAA 59.870 40.000 3.64 0.00 46.09 2.01
113 114 2.693267 AGGATCTCCTTGGCGTAAAC 57.307 50.000 0.00 0.00 46.09 2.01
114 115 1.209747 AGGATCTCCTTGGCGTAAACC 59.790 52.381 0.00 0.00 46.09 3.27
115 116 1.209747 GGATCTCCTTGGCGTAAACCT 59.790 52.381 0.00 0.00 0.00 3.50
116 117 2.552031 GATCTCCTTGGCGTAAACCTC 58.448 52.381 0.00 0.00 0.00 3.85
117 118 0.245539 TCTCCTTGGCGTAAACCTCG 59.754 55.000 0.00 0.00 0.00 4.63
118 119 0.739813 CTCCTTGGCGTAAACCTCGG 60.740 60.000 0.00 0.00 0.00 4.63
119 120 1.743995 CCTTGGCGTAAACCTCGGG 60.744 63.158 0.00 0.00 0.00 5.14
120 121 1.294138 CTTGGCGTAAACCTCGGGA 59.706 57.895 0.00 0.00 0.00 5.14
121 122 0.739813 CTTGGCGTAAACCTCGGGAG 60.740 60.000 0.00 0.00 0.00 4.30
132 133 1.501582 CCTCGGGAGGGAAGAAATCT 58.498 55.000 6.84 0.00 44.87 2.40
133 134 1.139853 CCTCGGGAGGGAAGAAATCTG 59.860 57.143 6.84 0.00 44.87 2.90
134 135 1.834263 CTCGGGAGGGAAGAAATCTGT 59.166 52.381 0.00 0.00 0.00 3.41
135 136 2.237392 CTCGGGAGGGAAGAAATCTGTT 59.763 50.000 0.00 0.00 0.00 3.16
136 137 2.642807 TCGGGAGGGAAGAAATCTGTTT 59.357 45.455 0.00 0.00 0.00 2.83
137 138 2.749621 CGGGAGGGAAGAAATCTGTTTG 59.250 50.000 0.00 0.00 0.00 2.93
138 139 3.559171 CGGGAGGGAAGAAATCTGTTTGA 60.559 47.826 0.00 0.00 0.00 2.69
139 140 4.013050 GGGAGGGAAGAAATCTGTTTGAG 58.987 47.826 0.00 0.00 0.00 3.02
140 141 4.263506 GGGAGGGAAGAAATCTGTTTGAGA 60.264 45.833 0.00 0.00 34.25 3.27
141 142 5.316987 GGAGGGAAGAAATCTGTTTGAGAA 58.683 41.667 0.00 0.00 33.12 2.87
142 143 5.414144 GGAGGGAAGAAATCTGTTTGAGAAG 59.586 44.000 0.00 0.00 33.12 2.85
143 144 5.946486 AGGGAAGAAATCTGTTTGAGAAGT 58.054 37.500 0.00 0.00 33.12 3.01
144 145 6.000840 AGGGAAGAAATCTGTTTGAGAAGTC 58.999 40.000 0.00 0.00 33.12 3.01
145 146 5.182190 GGGAAGAAATCTGTTTGAGAAGTCC 59.818 44.000 0.00 0.00 33.12 3.85
146 147 5.182190 GGAAGAAATCTGTTTGAGAAGTCCC 59.818 44.000 0.00 0.00 33.12 4.46
147 148 4.657013 AGAAATCTGTTTGAGAAGTCCCC 58.343 43.478 0.00 0.00 33.12 4.81
148 149 2.770164 ATCTGTTTGAGAAGTCCCCG 57.230 50.000 0.00 0.00 33.12 5.73
149 150 1.420430 TCTGTTTGAGAAGTCCCCGT 58.580 50.000 0.00 0.00 0.00 5.28
150 151 1.766496 TCTGTTTGAGAAGTCCCCGTT 59.234 47.619 0.00 0.00 0.00 4.44
151 152 1.873591 CTGTTTGAGAAGTCCCCGTTG 59.126 52.381 0.00 0.00 0.00 4.10
152 153 1.487142 TGTTTGAGAAGTCCCCGTTGA 59.513 47.619 0.00 0.00 0.00 3.18
153 154 2.143925 GTTTGAGAAGTCCCCGTTGAG 58.856 52.381 0.00 0.00 0.00 3.02
154 155 1.420430 TTGAGAAGTCCCCGTTGAGT 58.580 50.000 0.00 0.00 0.00 3.41
155 156 1.420430 TGAGAAGTCCCCGTTGAGTT 58.580 50.000 0.00 0.00 0.00 3.01
156 157 1.766496 TGAGAAGTCCCCGTTGAGTTT 59.234 47.619 0.00 0.00 0.00 2.66
157 158 2.224209 TGAGAAGTCCCCGTTGAGTTTC 60.224 50.000 0.00 0.00 0.00 2.78
158 159 1.766496 AGAAGTCCCCGTTGAGTTTCA 59.234 47.619 0.00 0.00 0.00 2.69
159 160 1.871676 GAAGTCCCCGTTGAGTTTCAC 59.128 52.381 0.00 0.00 0.00 3.18
160 161 0.108019 AGTCCCCGTTGAGTTTCACC 59.892 55.000 0.00 0.00 0.00 4.02
161 162 1.070105 TCCCCGTTGAGTTTCACCG 59.930 57.895 0.00 0.00 31.85 4.94
162 163 1.070105 CCCCGTTGAGTTTCACCGA 59.930 57.895 0.00 0.00 34.02 4.69
163 164 0.949105 CCCCGTTGAGTTTCACCGAG 60.949 60.000 0.00 0.00 34.02 4.63
164 165 0.032952 CCCGTTGAGTTTCACCGAGA 59.967 55.000 0.00 0.00 34.02 4.04
165 166 1.539496 CCCGTTGAGTTTCACCGAGAA 60.539 52.381 0.00 0.00 34.02 2.87
166 167 2.413837 CCGTTGAGTTTCACCGAGAAT 58.586 47.619 0.00 0.00 34.02 2.40
167 168 2.412089 CCGTTGAGTTTCACCGAGAATC 59.588 50.000 0.00 0.00 34.02 2.52
168 169 3.318017 CGTTGAGTTTCACCGAGAATCT 58.682 45.455 0.00 0.00 34.02 2.40
169 170 4.482386 CGTTGAGTTTCACCGAGAATCTA 58.518 43.478 0.00 0.00 34.02 1.98
170 171 4.559251 CGTTGAGTTTCACCGAGAATCTAG 59.441 45.833 0.00 0.00 34.02 2.43
171 172 4.111375 TGAGTTTCACCGAGAATCTAGC 57.889 45.455 0.00 0.00 36.62 3.42
172 173 3.764434 TGAGTTTCACCGAGAATCTAGCT 59.236 43.478 0.00 0.00 36.62 3.32
173 174 4.109050 GAGTTTCACCGAGAATCTAGCTG 58.891 47.826 0.00 0.00 36.62 4.24
174 175 3.764434 AGTTTCACCGAGAATCTAGCTGA 59.236 43.478 0.00 0.00 35.13 4.26
175 176 4.220821 AGTTTCACCGAGAATCTAGCTGAA 59.779 41.667 0.00 0.00 35.13 3.02
176 177 4.377839 TTCACCGAGAATCTAGCTGAAG 57.622 45.455 0.00 0.00 0.00 3.02
177 178 3.621558 TCACCGAGAATCTAGCTGAAGA 58.378 45.455 0.00 0.00 0.00 2.87
178 179 4.211125 TCACCGAGAATCTAGCTGAAGAT 58.789 43.478 0.00 0.00 37.84 2.40
179 180 5.377478 TCACCGAGAATCTAGCTGAAGATA 58.623 41.667 0.00 0.00 35.10 1.98
180 181 5.239744 TCACCGAGAATCTAGCTGAAGATAC 59.760 44.000 0.00 0.00 35.10 2.24
181 182 5.009110 CACCGAGAATCTAGCTGAAGATACA 59.991 44.000 0.00 0.00 35.10 2.29
182 183 5.009210 ACCGAGAATCTAGCTGAAGATACAC 59.991 44.000 0.00 0.00 35.10 2.90
183 184 5.009110 CCGAGAATCTAGCTGAAGATACACA 59.991 44.000 0.00 0.00 35.10 3.72
184 185 5.912396 CGAGAATCTAGCTGAAGATACACAC 59.088 44.000 0.00 0.00 35.10 3.82
185 186 6.155475 AGAATCTAGCTGAAGATACACACC 57.845 41.667 0.00 0.00 35.10 4.16
186 187 5.896678 AGAATCTAGCTGAAGATACACACCT 59.103 40.000 0.00 0.00 35.10 4.00
187 188 5.782893 ATCTAGCTGAAGATACACACCTC 57.217 43.478 0.00 0.00 34.40 3.85
188 189 4.600062 TCTAGCTGAAGATACACACCTCA 58.400 43.478 0.00 0.00 0.00 3.86
189 190 5.204292 TCTAGCTGAAGATACACACCTCAT 58.796 41.667 0.00 0.00 0.00 2.90
190 191 6.365520 TCTAGCTGAAGATACACACCTCATA 58.634 40.000 0.00 0.00 0.00 2.15
191 192 5.939764 AGCTGAAGATACACACCTCATAA 57.060 39.130 0.00 0.00 0.00 1.90
192 193 5.665459 AGCTGAAGATACACACCTCATAAC 58.335 41.667 0.00 0.00 0.00 1.89
193 194 4.811557 GCTGAAGATACACACCTCATAACC 59.188 45.833 0.00 0.00 0.00 2.85
194 195 5.626809 GCTGAAGATACACACCTCATAACCA 60.627 44.000 0.00 0.00 0.00 3.67
195 196 6.560003 TGAAGATACACACCTCATAACCAT 57.440 37.500 0.00 0.00 0.00 3.55
196 197 6.348498 TGAAGATACACACCTCATAACCATG 58.652 40.000 0.00 0.00 0.00 3.66
197 198 5.296151 AGATACACACCTCATAACCATGG 57.704 43.478 11.19 11.19 32.61 3.66
198 199 2.128771 ACACACCTCATAACCATGGC 57.871 50.000 13.04 0.00 32.61 4.40
199 200 1.340991 ACACACCTCATAACCATGGCC 60.341 52.381 13.04 0.00 32.61 5.36
200 201 0.107214 ACACCTCATAACCATGGCCG 60.107 55.000 13.04 0.00 32.61 6.13
201 202 0.107214 CACCTCATAACCATGGCCGT 60.107 55.000 13.04 0.00 32.61 5.68
202 203 0.180406 ACCTCATAACCATGGCCGTC 59.820 55.000 13.04 0.00 32.61 4.79
203 204 0.535102 CCTCATAACCATGGCCGTCC 60.535 60.000 13.04 0.00 32.61 4.79
212 213 4.961637 TGGCCGTCCATGAATGAG 57.038 55.556 0.00 0.00 37.47 2.90
213 214 1.224315 TGGCCGTCCATGAATGAGG 59.776 57.895 0.00 0.00 37.47 3.86
214 215 1.526917 GGCCGTCCATGAATGAGGG 60.527 63.158 0.00 0.00 0.00 4.30
215 216 1.526887 GCCGTCCATGAATGAGGGA 59.473 57.895 11.85 0.00 29.76 4.20
216 217 0.107214 GCCGTCCATGAATGAGGGAA 60.107 55.000 11.85 0.00 35.90 3.97
217 218 1.668419 CCGTCCATGAATGAGGGAAC 58.332 55.000 0.00 0.00 35.90 3.62
230 231 2.843545 GGAACCCCAGCTTGGTCA 59.156 61.111 5.17 0.00 35.17 4.02
231 232 1.384191 GGAACCCCAGCTTGGTCAT 59.616 57.895 5.17 0.00 35.17 3.06
232 233 0.681243 GGAACCCCAGCTTGGTCATC 60.681 60.000 5.17 1.04 35.17 2.92
233 234 0.038166 GAACCCCAGCTTGGTCATCA 59.962 55.000 5.17 0.00 35.17 3.07
234 235 0.706433 AACCCCAGCTTGGTCATCAT 59.294 50.000 5.17 0.00 35.17 2.45
235 236 1.595311 ACCCCAGCTTGGTCATCATA 58.405 50.000 2.68 0.00 35.17 2.15
236 237 2.138542 ACCCCAGCTTGGTCATCATAT 58.861 47.619 2.68 0.00 35.17 1.78
237 238 2.158564 ACCCCAGCTTGGTCATCATATG 60.159 50.000 2.68 0.00 35.17 1.78
238 239 1.884579 CCCAGCTTGGTCATCATATGC 59.115 52.381 0.00 0.00 35.17 3.14
239 240 2.488528 CCCAGCTTGGTCATCATATGCT 60.489 50.000 0.00 0.00 35.17 3.79
240 241 2.812591 CCAGCTTGGTCATCATATGCTC 59.187 50.000 0.00 0.00 31.35 4.26
241 242 2.812591 CAGCTTGGTCATCATATGCTCC 59.187 50.000 0.00 0.00 0.00 4.70
242 243 2.440627 AGCTTGGTCATCATATGCTCCA 59.559 45.455 0.00 1.29 34.22 3.86
243 244 3.117776 AGCTTGGTCATCATATGCTCCAA 60.118 43.478 14.81 14.81 39.59 3.53
245 246 4.776435 TTGGTCATCATATGCTCCAAGA 57.224 40.909 12.91 0.00 38.24 3.02
246 247 4.776435 TGGTCATCATATGCTCCAAGAA 57.224 40.909 0.00 0.00 33.54 2.52
247 248 5.114764 TGGTCATCATATGCTCCAAGAAA 57.885 39.130 0.00 0.00 33.54 2.52
248 249 5.128205 TGGTCATCATATGCTCCAAGAAAG 58.872 41.667 0.00 0.00 33.54 2.62
249 250 5.104402 TGGTCATCATATGCTCCAAGAAAGA 60.104 40.000 0.00 0.00 33.54 2.52
250 251 5.238214 GGTCATCATATGCTCCAAGAAAGAC 59.762 44.000 0.00 0.00 0.00 3.01
251 252 5.238214 GTCATCATATGCTCCAAGAAAGACC 59.762 44.000 0.00 0.00 0.00 3.85
252 253 4.842531 TCATATGCTCCAAGAAAGACCA 57.157 40.909 0.00 0.00 0.00 4.02
253 254 4.517285 TCATATGCTCCAAGAAAGACCAC 58.483 43.478 0.00 0.00 0.00 4.16
254 255 4.225942 TCATATGCTCCAAGAAAGACCACT 59.774 41.667 0.00 0.00 0.00 4.00
255 256 2.550830 TGCTCCAAGAAAGACCACTC 57.449 50.000 0.00 0.00 0.00 3.51
256 257 1.072331 TGCTCCAAGAAAGACCACTCC 59.928 52.381 0.00 0.00 0.00 3.85
257 258 1.072331 GCTCCAAGAAAGACCACTCCA 59.928 52.381 0.00 0.00 0.00 3.86
258 259 2.772287 CTCCAAGAAAGACCACTCCAC 58.228 52.381 0.00 0.00 0.00 4.02
259 260 2.370189 CTCCAAGAAAGACCACTCCACT 59.630 50.000 0.00 0.00 0.00 4.00
260 261 2.368875 TCCAAGAAAGACCACTCCACTC 59.631 50.000 0.00 0.00 0.00 3.51
261 262 2.370189 CCAAGAAAGACCACTCCACTCT 59.630 50.000 0.00 0.00 0.00 3.24
262 263 3.397482 CAAGAAAGACCACTCCACTCTG 58.603 50.000 0.00 0.00 0.00 3.35
263 264 2.683768 AGAAAGACCACTCCACTCTGT 58.316 47.619 0.00 0.00 0.00 3.41
264 265 2.630580 AGAAAGACCACTCCACTCTGTC 59.369 50.000 0.00 0.00 0.00 3.51
265 266 2.088104 AAGACCACTCCACTCTGTCA 57.912 50.000 0.00 0.00 0.00 3.58
266 267 2.317371 AGACCACTCCACTCTGTCAT 57.683 50.000 0.00 0.00 0.00 3.06
267 268 3.458044 AGACCACTCCACTCTGTCATA 57.542 47.619 0.00 0.00 0.00 2.15
268 269 3.093057 AGACCACTCCACTCTGTCATAC 58.907 50.000 0.00 0.00 0.00 2.39
269 270 2.826128 GACCACTCCACTCTGTCATACA 59.174 50.000 0.00 0.00 0.00 2.29
270 271 2.563179 ACCACTCCACTCTGTCATACAC 59.437 50.000 0.00 0.00 0.00 2.90
271 272 2.093973 CCACTCCACTCTGTCATACACC 60.094 54.545 0.00 0.00 0.00 4.16
272 273 2.828520 CACTCCACTCTGTCATACACCT 59.171 50.000 0.00 0.00 0.00 4.00
273 274 3.259374 CACTCCACTCTGTCATACACCTT 59.741 47.826 0.00 0.00 0.00 3.50
274 275 3.511934 ACTCCACTCTGTCATACACCTTC 59.488 47.826 0.00 0.00 0.00 3.46
275 276 3.506398 TCCACTCTGTCATACACCTTCA 58.494 45.455 0.00 0.00 0.00 3.02
276 277 4.096681 TCCACTCTGTCATACACCTTCAT 58.903 43.478 0.00 0.00 0.00 2.57
277 278 4.160439 TCCACTCTGTCATACACCTTCATC 59.840 45.833 0.00 0.00 0.00 2.92
278 279 4.081476 CCACTCTGTCATACACCTTCATCA 60.081 45.833 0.00 0.00 0.00 3.07
279 280 5.396101 CCACTCTGTCATACACCTTCATCAT 60.396 44.000 0.00 0.00 0.00 2.45
280 281 6.183360 CCACTCTGTCATACACCTTCATCATA 60.183 42.308 0.00 0.00 0.00 2.15
281 282 7.440198 CACTCTGTCATACACCTTCATCATAT 58.560 38.462 0.00 0.00 0.00 1.78
282 283 7.598118 CACTCTGTCATACACCTTCATCATATC 59.402 40.741 0.00 0.00 0.00 1.63
283 284 7.508636 ACTCTGTCATACACCTTCATCATATCT 59.491 37.037 0.00 0.00 0.00 1.98
284 285 8.940397 TCTGTCATACACCTTCATCATATCTA 57.060 34.615 0.00 0.00 0.00 1.98
285 286 9.367160 TCTGTCATACACCTTCATCATATCTAA 57.633 33.333 0.00 0.00 0.00 2.10
286 287 9.416794 CTGTCATACACCTTCATCATATCTAAC 57.583 37.037 0.00 0.00 0.00 2.34
287 288 9.147732 TGTCATACACCTTCATCATATCTAACT 57.852 33.333 0.00 0.00 0.00 2.24
288 289 9.988815 GTCATACACCTTCATCATATCTAACTT 57.011 33.333 0.00 0.00 0.00 2.66
293 294 9.823647 ACACCTTCATCATATCTAACTTAACTG 57.176 33.333 0.00 0.00 0.00 3.16
294 295 8.768955 CACCTTCATCATATCTAACTTAACTGC 58.231 37.037 0.00 0.00 0.00 4.40
295 296 7.653713 ACCTTCATCATATCTAACTTAACTGCG 59.346 37.037 0.00 0.00 0.00 5.18
296 297 7.359598 CCTTCATCATATCTAACTTAACTGCGC 60.360 40.741 0.00 0.00 0.00 6.09
297 298 6.512297 TCATCATATCTAACTTAACTGCGCA 58.488 36.000 10.98 10.98 0.00 6.09
298 299 7.154656 TCATCATATCTAACTTAACTGCGCAT 58.845 34.615 12.24 0.00 0.00 4.73
299 300 8.303876 TCATCATATCTAACTTAACTGCGCATA 58.696 33.333 12.24 0.00 0.00 3.14
300 301 8.925700 CATCATATCTAACTTAACTGCGCATAA 58.074 33.333 12.24 6.95 0.00 1.90
301 302 9.658799 ATCATATCTAACTTAACTGCGCATAAT 57.341 29.630 12.24 2.23 0.00 1.28
302 303 8.925700 TCATATCTAACTTAACTGCGCATAATG 58.074 33.333 12.24 0.40 0.00 1.90
303 304 5.984233 TCTAACTTAACTGCGCATAATGG 57.016 39.130 12.24 0.00 0.00 3.16
304 305 5.424757 TCTAACTTAACTGCGCATAATGGT 58.575 37.500 12.24 0.75 0.00 3.55
305 306 5.878116 TCTAACTTAACTGCGCATAATGGTT 59.122 36.000 12.24 14.09 0.00 3.67
306 307 5.385509 AACTTAACTGCGCATAATGGTTT 57.614 34.783 12.24 0.00 0.00 3.27
307 308 4.981794 ACTTAACTGCGCATAATGGTTTC 58.018 39.130 12.24 0.00 0.00 2.78
308 309 4.700213 ACTTAACTGCGCATAATGGTTTCT 59.300 37.500 12.24 0.00 0.00 2.52
309 310 5.183140 ACTTAACTGCGCATAATGGTTTCTT 59.817 36.000 12.24 0.00 0.00 2.52
310 311 3.764885 ACTGCGCATAATGGTTTCTTC 57.235 42.857 12.24 0.00 0.00 2.87
311 312 2.423538 ACTGCGCATAATGGTTTCTTCC 59.576 45.455 12.24 0.00 0.00 3.46
312 313 1.400142 TGCGCATAATGGTTTCTTCCG 59.600 47.619 5.66 0.00 0.00 4.30
313 314 1.859998 GCGCATAATGGTTTCTTCCGC 60.860 52.381 0.30 0.00 0.00 5.54
314 315 1.670811 CGCATAATGGTTTCTTCCGCT 59.329 47.619 0.00 0.00 0.00 5.52
315 316 2.097466 CGCATAATGGTTTCTTCCGCTT 59.903 45.455 0.00 0.00 0.00 4.68
316 317 3.695816 GCATAATGGTTTCTTCCGCTTC 58.304 45.455 0.00 0.00 0.00 3.86
317 318 3.489229 GCATAATGGTTTCTTCCGCTTCC 60.489 47.826 0.00 0.00 0.00 3.46
318 319 2.586648 AATGGTTTCTTCCGCTTCCT 57.413 45.000 0.00 0.00 0.00 3.36
319 320 2.586648 ATGGTTTCTTCCGCTTCCTT 57.413 45.000 0.00 0.00 0.00 3.36
320 321 1.604604 TGGTTTCTTCCGCTTCCTTG 58.395 50.000 0.00 0.00 0.00 3.61
321 322 1.133915 TGGTTTCTTCCGCTTCCTTGT 60.134 47.619 0.00 0.00 0.00 3.16
322 323 1.954382 GGTTTCTTCCGCTTCCTTGTT 59.046 47.619 0.00 0.00 0.00 2.83
323 324 2.031069 GGTTTCTTCCGCTTCCTTGTTC 60.031 50.000 0.00 0.00 0.00 3.18
324 325 1.892209 TTCTTCCGCTTCCTTGTTCC 58.108 50.000 0.00 0.00 0.00 3.62
325 326 0.762418 TCTTCCGCTTCCTTGTTCCA 59.238 50.000 0.00 0.00 0.00 3.53
326 327 1.142060 TCTTCCGCTTCCTTGTTCCAA 59.858 47.619 0.00 0.00 0.00 3.53
327 328 2.162681 CTTCCGCTTCCTTGTTCCAAT 58.837 47.619 0.00 0.00 0.00 3.16
328 329 3.008594 TCTTCCGCTTCCTTGTTCCAATA 59.991 43.478 0.00 0.00 0.00 1.90
329 330 2.985896 TCCGCTTCCTTGTTCCAATAG 58.014 47.619 0.00 0.00 0.00 1.73
330 331 1.401905 CCGCTTCCTTGTTCCAATAGC 59.598 52.381 0.00 0.00 0.00 2.97
331 332 2.083774 CGCTTCCTTGTTCCAATAGCA 58.916 47.619 0.00 0.00 0.00 3.49
332 333 2.684881 CGCTTCCTTGTTCCAATAGCAT 59.315 45.455 0.00 0.00 0.00 3.79
333 334 3.488047 CGCTTCCTTGTTCCAATAGCATG 60.488 47.826 0.00 0.00 0.00 4.06
334 335 3.696051 GCTTCCTTGTTCCAATAGCATGA 59.304 43.478 0.00 0.00 0.00 3.07
335 336 4.158394 GCTTCCTTGTTCCAATAGCATGAA 59.842 41.667 0.00 0.00 0.00 2.57
336 337 5.643379 TTCCTTGTTCCAATAGCATGAAC 57.357 39.130 0.00 0.00 39.02 3.18
337 338 3.689161 TCCTTGTTCCAATAGCATGAACG 59.311 43.478 0.00 0.00 40.92 3.95
338 339 3.429085 CTTGTTCCAATAGCATGAACGC 58.571 45.455 0.00 0.00 40.92 4.84
339 340 2.431454 TGTTCCAATAGCATGAACGCA 58.569 42.857 0.00 0.00 40.92 5.24
340 341 2.161410 TGTTCCAATAGCATGAACGCAC 59.839 45.455 0.00 0.00 40.92 5.34
341 342 2.401583 TCCAATAGCATGAACGCACT 57.598 45.000 0.00 0.00 0.00 4.40
342 343 2.279741 TCCAATAGCATGAACGCACTC 58.720 47.619 0.00 0.00 0.00 3.51
343 344 2.009051 CCAATAGCATGAACGCACTCA 58.991 47.619 0.00 0.00 0.00 3.41
344 345 2.615447 CCAATAGCATGAACGCACTCAT 59.385 45.455 0.00 0.00 36.45 2.90
345 346 3.809279 CCAATAGCATGAACGCACTCATA 59.191 43.478 0.00 0.00 34.20 2.15
346 347 4.273235 CCAATAGCATGAACGCACTCATAA 59.727 41.667 0.00 0.00 34.20 1.90
347 348 5.438117 CAATAGCATGAACGCACTCATAAG 58.562 41.667 0.00 0.00 34.20 1.73
348 349 1.667724 AGCATGAACGCACTCATAAGC 59.332 47.619 0.00 0.00 34.20 3.09
349 350 1.398041 GCATGAACGCACTCATAAGCA 59.602 47.619 0.00 0.00 34.20 3.91
350 351 2.032550 GCATGAACGCACTCATAAGCAT 59.967 45.455 0.00 0.00 34.20 3.79
351 352 3.847467 GCATGAACGCACTCATAAGCATC 60.847 47.826 0.00 0.00 34.20 3.91
352 353 1.926510 TGAACGCACTCATAAGCATCG 59.073 47.619 0.00 0.00 0.00 3.84
353 354 0.652592 AACGCACTCATAAGCATCGC 59.347 50.000 0.00 0.00 0.00 4.58
354 355 1.200103 CGCACTCATAAGCATCGCG 59.800 57.895 0.00 0.00 34.89 5.87
355 356 1.566563 GCACTCATAAGCATCGCGG 59.433 57.895 6.13 0.00 0.00 6.46
356 357 0.875908 GCACTCATAAGCATCGCGGA 60.876 55.000 6.13 0.00 0.00 5.54
357 358 0.855349 CACTCATAAGCATCGCGGAC 59.145 55.000 6.13 0.00 0.00 4.79
358 359 0.459899 ACTCATAAGCATCGCGGACA 59.540 50.000 6.13 0.00 0.00 4.02
359 360 1.069204 ACTCATAAGCATCGCGGACAT 59.931 47.619 6.13 0.00 0.00 3.06
360 361 2.138320 CTCATAAGCATCGCGGACATT 58.862 47.619 6.13 0.00 0.00 2.71
361 362 1.866601 TCATAAGCATCGCGGACATTG 59.133 47.619 6.13 0.00 0.00 2.82
362 363 1.599071 CATAAGCATCGCGGACATTGT 59.401 47.619 6.13 0.00 0.00 2.71
363 364 1.286501 TAAGCATCGCGGACATTGTC 58.713 50.000 6.13 8.34 0.00 3.18
364 365 1.695893 AAGCATCGCGGACATTGTCG 61.696 55.000 6.13 7.36 32.65 4.35
365 366 3.005898 CATCGCGGACATTGTCGG 58.994 61.111 17.38 17.38 36.25 4.79
366 367 1.809619 CATCGCGGACATTGTCGGT 60.810 57.895 21.10 1.79 35.71 4.69
367 368 1.079405 ATCGCGGACATTGTCGGTT 60.079 52.632 21.10 8.00 35.71 4.44
368 369 0.173935 ATCGCGGACATTGTCGGTTA 59.826 50.000 21.10 12.46 35.71 2.85
369 370 0.038435 TCGCGGACATTGTCGGTTAA 60.038 50.000 21.10 8.21 35.71 2.01
370 371 0.791422 CGCGGACATTGTCGGTTAAA 59.209 50.000 21.10 0.00 35.71 1.52
371 372 1.194997 CGCGGACATTGTCGGTTAAAA 59.805 47.619 21.10 0.00 35.71 1.52
372 373 2.723618 CGCGGACATTGTCGGTTAAAAG 60.724 50.000 21.10 6.85 35.71 2.27
373 374 2.224784 GCGGACATTGTCGGTTAAAAGT 59.775 45.455 21.10 0.00 35.71 2.66
374 375 3.666111 GCGGACATTGTCGGTTAAAAGTC 60.666 47.826 21.10 3.37 35.71 3.01
375 376 3.744426 CGGACATTGTCGGTTAAAAGTCT 59.256 43.478 14.37 0.00 32.65 3.24
376 377 4.925054 CGGACATTGTCGGTTAAAAGTCTA 59.075 41.667 14.37 0.00 32.65 2.59
377 378 5.164022 CGGACATTGTCGGTTAAAAGTCTAC 60.164 44.000 14.37 0.00 32.65 2.59
378 379 5.121298 GGACATTGTCGGTTAAAAGTCTACC 59.879 44.000 10.56 0.00 32.65 3.18
379 380 4.999311 ACATTGTCGGTTAAAAGTCTACCC 59.001 41.667 0.00 0.00 0.00 3.69
380 381 3.302365 TGTCGGTTAAAAGTCTACCCG 57.698 47.619 0.00 0.00 36.83 5.28
381 382 2.029110 TGTCGGTTAAAAGTCTACCCGG 60.029 50.000 0.00 0.00 36.19 5.73
382 383 1.066929 TCGGTTAAAAGTCTACCCGGC 60.067 52.381 0.00 0.00 36.19 6.13
383 384 1.338011 CGGTTAAAAGTCTACCCGGCA 60.338 52.381 0.00 0.00 0.00 5.69
384 385 2.079158 GGTTAAAAGTCTACCCGGCAC 58.921 52.381 0.00 0.00 0.00 5.01
385 386 2.079158 GTTAAAAGTCTACCCGGCACC 58.921 52.381 0.00 0.00 0.00 5.01
386 387 1.350071 TAAAAGTCTACCCGGCACCA 58.650 50.000 0.00 0.00 0.00 4.17
387 388 0.475044 AAAAGTCTACCCGGCACCAA 59.525 50.000 0.00 0.00 0.00 3.67
388 389 0.250597 AAAGTCTACCCGGCACCAAC 60.251 55.000 0.00 0.00 0.00 3.77
389 390 2.433664 GTCTACCCGGCACCAACG 60.434 66.667 0.00 0.00 0.00 4.10
390 391 4.382320 TCTACCCGGCACCAACGC 62.382 66.667 0.00 0.00 0.00 4.84
391 392 4.690719 CTACCCGGCACCAACGCA 62.691 66.667 0.00 0.00 0.00 5.24
392 393 4.992511 TACCCGGCACCAACGCAC 62.993 66.667 0.00 0.00 0.00 5.34
395 396 3.591835 CCGGCACCAACGCACTTT 61.592 61.111 0.00 0.00 0.00 2.66
396 397 2.255172 CCGGCACCAACGCACTTTA 61.255 57.895 0.00 0.00 0.00 1.85
397 398 1.082366 CGGCACCAACGCACTTTAC 60.082 57.895 0.00 0.00 0.00 2.01
398 399 1.777030 CGGCACCAACGCACTTTACA 61.777 55.000 0.00 0.00 0.00 2.41
399 400 0.317519 GGCACCAACGCACTTTACAC 60.318 55.000 0.00 0.00 0.00 2.90
400 401 0.317519 GCACCAACGCACTTTACACC 60.318 55.000 0.00 0.00 0.00 4.16
401 402 1.018148 CACCAACGCACTTTACACCA 58.982 50.000 0.00 0.00 0.00 4.17
402 403 1.402259 CACCAACGCACTTTACACCAA 59.598 47.619 0.00 0.00 0.00 3.67
403 404 1.673920 ACCAACGCACTTTACACCAAG 59.326 47.619 0.00 0.00 0.00 3.61
404 405 1.599419 CCAACGCACTTTACACCAAGC 60.599 52.381 0.00 0.00 0.00 4.01
405 406 1.064803 CAACGCACTTTACACCAAGCA 59.935 47.619 0.00 0.00 0.00 3.91
406 407 1.604604 ACGCACTTTACACCAAGCAT 58.395 45.000 0.00 0.00 0.00 3.79
407 408 1.535462 ACGCACTTTACACCAAGCATC 59.465 47.619 0.00 0.00 0.00 3.91
408 409 1.464023 CGCACTTTACACCAAGCATCG 60.464 52.381 0.00 0.00 0.00 3.84
409 410 1.729149 GCACTTTACACCAAGCATCGC 60.729 52.381 0.00 0.00 0.00 4.58
410 411 0.796312 ACTTTACACCAAGCATCGCG 59.204 50.000 0.00 0.00 0.00 5.87
535 536 5.358160 CCTTCCAAAGGTCAGAATTGTATCC 59.642 44.000 0.00 0.00 43.95 2.59
567 568 7.356540 TGTGTTTCGTGTTCCATATTTACTTG 58.643 34.615 0.00 0.00 0.00 3.16
577 578 7.836685 TGTTCCATATTTACTTGCCTGGATTTA 59.163 33.333 0.00 0.00 33.10 1.40
693 694 1.619654 TGAGGTCCAATTTGGCACTG 58.380 50.000 10.76 0.00 37.47 3.66
864 865 8.695456 AGTCTTTCAATCATTGTTTGGTTAAGT 58.305 29.630 0.00 0.00 0.00 2.24
1840 1841 4.511527 AGTTCTGCATCGAGACATCAAAT 58.488 39.130 0.00 0.00 0.00 2.32
2161 2164 8.579850 TTTATGCTGGTTGAAGTCTTATGATT 57.420 30.769 0.00 0.00 0.00 2.57
2162 2165 8.579850 TTATGCTGGTTGAAGTCTTATGATTT 57.420 30.769 0.00 0.00 0.00 2.17
2340 2343 5.060427 TCAAAGATTTTCCTCCTTCCACA 57.940 39.130 0.00 0.00 0.00 4.17
2681 2684 6.013466 AGCCATTGGGTTCATTTATTGACTTT 60.013 34.615 0.36 0.00 36.17 2.66
2689 2692 9.358872 GGGTTCATTTATTGACTTTTGAAGATC 57.641 33.333 0.00 0.00 32.84 2.75
2691 2694 9.825972 GTTCATTTATTGACTTTTGAAGATCGA 57.174 29.630 0.00 0.00 32.84 3.59
2737 2740 8.092521 AGTCTAATTTCACACAATCTCACAAG 57.907 34.615 0.00 0.00 0.00 3.16
2768 2772 6.674694 ATAGCACTCAAAAGCAAGATACAG 57.325 37.500 0.00 0.00 0.00 2.74
2769 2773 3.190118 AGCACTCAAAAGCAAGATACAGC 59.810 43.478 0.00 0.00 0.00 4.40
2789 2794 6.849502 ACAGCTGAAAATATGACATCACTTG 58.150 36.000 23.35 0.00 0.00 3.16
2910 2920 3.726190 GCTTACTCATCTTGCTGAAACGC 60.726 47.826 0.00 0.00 0.00 4.84
2915 2925 2.877786 TCATCTTGCTGAAACGCTGAAA 59.122 40.909 0.00 0.00 0.00 2.69
2944 2954 8.019656 ACGATAAGTTAGTTTGACCCATCTAT 57.980 34.615 0.00 0.00 0.00 1.98
2945 2955 8.142551 ACGATAAGTTAGTTTGACCCATCTATC 58.857 37.037 0.00 0.00 0.00 2.08
3012 3022 9.813826 CTTGTCCCTTATTATTATCCCTGAAAT 57.186 33.333 0.00 0.00 0.00 2.17
3022 3032 5.659440 TTATCCCTGAAATGAAAACAGCC 57.341 39.130 0.00 0.00 0.00 4.85
3024 3034 4.380843 TCCCTGAAATGAAAACAGCCTA 57.619 40.909 0.00 0.00 0.00 3.93
3043 3053 5.048013 AGCCTAAACAAAAGGTCTTATGCAC 60.048 40.000 0.00 0.00 36.43 4.57
3116 3136 2.479566 TCTTCAATGACCCTCTGTGC 57.520 50.000 0.00 0.00 0.00 4.57
3117 3137 1.003580 TCTTCAATGACCCTCTGTGCC 59.996 52.381 0.00 0.00 0.00 5.01
3193 3214 9.823647 CCTAATCACATCTAGCTTCTTAGAAAA 57.176 33.333 0.00 0.00 33.64 2.29
3306 3327 7.361127 CCTTGAAATGTCTGCATCATTATCTC 58.639 38.462 14.63 10.69 34.92 2.75
3314 3335 4.525874 TCTGCATCATTATCTCGATCTGGT 59.474 41.667 0.00 0.00 0.00 4.00
3316 3337 3.931468 GCATCATTATCTCGATCTGGTGG 59.069 47.826 0.00 0.00 0.00 4.61
3320 3341 5.359756 TCATTATCTCGATCTGGTGGTTTG 58.640 41.667 0.00 0.00 0.00 2.93
3321 3342 2.029838 ATCTCGATCTGGTGGTTTGC 57.970 50.000 0.00 0.00 0.00 3.68
3382 3424 7.732222 AATCAAAATACAGGGGATAAGCAAA 57.268 32.000 0.00 0.00 0.00 3.68
3434 3487 6.462500 TGGGTCGTAGTAGACTAGATATGAC 58.538 44.000 13.81 13.81 40.76 3.06
3494 3547 3.666274 TGTATTAGTGGTTGGGTTGTCG 58.334 45.455 0.00 0.00 0.00 4.35
3549 3602 1.974236 AGAACACCCAACAGGAGAGAG 59.026 52.381 0.00 0.00 39.89 3.20
3557 3610 2.419851 CCAACAGGAGAGAGGAGATTGC 60.420 54.545 0.00 0.00 0.00 3.56
3587 3642 3.770666 TCTTAGGAAGCGATTCAACGAG 58.229 45.455 16.24 7.28 35.09 4.18
3588 3643 3.442625 TCTTAGGAAGCGATTCAACGAGA 59.557 43.478 16.24 9.43 35.09 4.04
3595 3650 1.816370 CGATTCAACGAGACGAGAGG 58.184 55.000 0.00 0.00 35.09 3.69
3596 3651 1.551145 GATTCAACGAGACGAGAGGC 58.449 55.000 0.00 0.00 42.06 4.70
3728 3787 8.853345 CGCGAATAAGTGTACTTCTAACTTTTA 58.147 33.333 0.00 0.00 37.40 1.52
3963 4022 1.409427 GAGGGAGTACGTGGGATCTTG 59.591 57.143 0.00 0.00 0.00 3.02
4000 5266 4.360951 TTTTTCTGTACGTGGGATCCTT 57.639 40.909 12.58 0.00 0.00 3.36
4026 5292 1.104577 TGGGTTCAGCCACGGTTTTC 61.105 55.000 0.00 0.00 39.65 2.29
4132 5398 2.581354 GCTCCGCCACTGATCAGT 59.419 61.111 22.89 22.89 43.61 3.41
4368 6071 1.206849 GCAAGAGGAAGAGAGGAGGTG 59.793 57.143 0.00 0.00 0.00 4.00
4615 6320 7.999679 TGCTTGAGTTCCCAATTAATAGATTG 58.000 34.615 0.00 0.00 36.89 2.67
4618 6323 9.793252 CTTGAGTTCCCAATTAATAGATTGTTG 57.207 33.333 0.00 0.00 35.68 3.33
5102 6814 3.324713 GCCACCTGATAGGCCTGT 58.675 61.111 17.99 9.34 45.18 4.00
5481 7193 0.317020 GTTTCACGTTGCTGCAGGTC 60.317 55.000 17.12 0.00 0.00 3.85
5526 7238 6.074302 GCATGTAACCGTGTGTTCTCATATAG 60.074 42.308 0.00 0.00 38.42 1.31
5527 7239 5.898174 TGTAACCGTGTGTTCTCATATAGG 58.102 41.667 0.00 0.00 38.42 2.57
5528 7240 5.653330 TGTAACCGTGTGTTCTCATATAGGA 59.347 40.000 0.00 0.00 38.42 2.94
5529 7241 5.871396 AACCGTGTGTTCTCATATAGGAT 57.129 39.130 0.00 0.00 28.45 3.24
5530 7242 6.971726 AACCGTGTGTTCTCATATAGGATA 57.028 37.500 0.00 0.00 28.45 2.59
5532 7244 7.540474 ACCGTGTGTTCTCATATAGGATATT 57.460 36.000 0.00 0.00 0.00 1.28
5533 7245 7.378966 ACCGTGTGTTCTCATATAGGATATTG 58.621 38.462 0.00 0.00 0.00 1.90
5550 7346 8.159229 AGGATATTGGGGGTGTTTATATACTC 57.841 38.462 0.00 0.00 0.00 2.59
5596 7407 7.094463 GGGCATGACTGAATTTATAGATCCTTG 60.094 40.741 0.00 0.00 0.00 3.61
5745 7612 1.140161 CATTTCGTCCTCCGCCGTA 59.860 57.895 0.00 0.00 36.19 4.02
5809 7687 1.677820 CCCATTCCTAAAACGCGTCCT 60.678 52.381 14.44 5.04 0.00 3.85
5810 7688 2.081462 CCATTCCTAAAACGCGTCCTT 58.919 47.619 14.44 12.19 0.00 3.36
5926 7865 4.688879 CCGCGGTCAGCTTTATTAATGATA 59.311 41.667 19.50 0.00 45.59 2.15
5995 7934 3.337889 CCGAGTGTGCGGTGTGTG 61.338 66.667 0.00 0.00 46.07 3.82
5996 7935 2.584970 CGAGTGTGCGGTGTGTGT 60.585 61.111 0.00 0.00 0.00 3.72
5997 7936 2.870341 CGAGTGTGCGGTGTGTGTG 61.870 63.158 0.00 0.00 0.00 3.82
5998 7937 1.813753 GAGTGTGCGGTGTGTGTGT 60.814 57.895 0.00 0.00 0.00 3.72
5999 7938 2.035617 GAGTGTGCGGTGTGTGTGTG 62.036 60.000 0.00 0.00 0.00 3.82
6000 7939 2.046796 TGTGCGGTGTGTGTGTGT 60.047 55.556 0.00 0.00 0.00 3.72
6001 7940 2.394563 TGTGCGGTGTGTGTGTGTG 61.395 57.895 0.00 0.00 0.00 3.82
6002 7941 2.821810 TGCGGTGTGTGTGTGTGG 60.822 61.111 0.00 0.00 0.00 4.17
6026 7965 3.703127 GGGGTCCTCGTCCGCTTT 61.703 66.667 0.00 0.00 35.46 3.51
6041 7982 2.356553 TTTCAGACGCCCCGTTCG 60.357 61.111 0.00 0.00 41.37 3.95
6055 7996 0.460109 CGTTCGCATCTCATCACCCA 60.460 55.000 0.00 0.00 0.00 4.51
6145 8236 4.699522 AGGGCAAGGCGACCGTTC 62.700 66.667 0.00 0.00 0.00 3.95
6150 8241 4.675029 AAGGCGACCGTTCCCGTG 62.675 66.667 0.00 0.00 0.00 4.94
6237 8425 1.001641 GAAGTGGCACTGGGAGCAT 60.002 57.895 22.83 2.62 0.00 3.79
6312 8502 1.758514 GAGAGGATCCCAGTGCCGA 60.759 63.158 8.55 0.00 33.66 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.229784 GAGATTCAGGGTGTGGCTTTTG 59.770 50.000 0.00 0.00 0.00 2.44
1 2 2.519013 GAGATTCAGGGTGTGGCTTTT 58.481 47.619 0.00 0.00 0.00 2.27
2 3 1.272147 GGAGATTCAGGGTGTGGCTTT 60.272 52.381 0.00 0.00 0.00 3.51
3 4 0.329596 GGAGATTCAGGGTGTGGCTT 59.670 55.000 0.00 0.00 0.00 4.35
4 5 0.548682 AGGAGATTCAGGGTGTGGCT 60.549 55.000 0.00 0.00 0.00 4.75
5 6 0.329596 AAGGAGATTCAGGGTGTGGC 59.670 55.000 0.00 0.00 0.00 5.01
6 7 1.912043 AGAAGGAGATTCAGGGTGTGG 59.088 52.381 0.00 0.00 40.67 4.17
7 8 2.093235 GGAGAAGGAGATTCAGGGTGTG 60.093 54.545 0.00 0.00 40.67 3.82
8 9 2.192263 GGAGAAGGAGATTCAGGGTGT 58.808 52.381 0.00 0.00 40.67 4.16
9 10 1.488393 GGGAGAAGGAGATTCAGGGTG 59.512 57.143 0.00 0.00 40.67 4.61
10 11 1.886422 GGGAGAAGGAGATTCAGGGT 58.114 55.000 0.00 0.00 40.67 4.34
11 12 0.755686 CGGGAGAAGGAGATTCAGGG 59.244 60.000 0.00 0.00 40.67 4.45
12 13 0.105778 GCGGGAGAAGGAGATTCAGG 59.894 60.000 0.00 0.00 40.67 3.86
13 14 1.118838 AGCGGGAGAAGGAGATTCAG 58.881 55.000 0.00 0.00 40.67 3.02
14 15 0.826715 CAGCGGGAGAAGGAGATTCA 59.173 55.000 0.00 0.00 40.67 2.57
15 16 0.105778 CCAGCGGGAGAAGGAGATTC 59.894 60.000 0.00 0.00 38.28 2.52
16 17 2.216148 CCAGCGGGAGAAGGAGATT 58.784 57.895 0.00 0.00 35.59 2.40
17 18 3.962557 CCAGCGGGAGAAGGAGAT 58.037 61.111 0.00 0.00 35.59 2.75
28 29 1.743321 TTTTGAAACAGGCCCAGCGG 61.743 55.000 0.00 0.00 0.00 5.52
29 30 0.318955 CTTTTGAAACAGGCCCAGCG 60.319 55.000 0.00 0.00 0.00 5.18
30 31 0.033920 CCTTTTGAAACAGGCCCAGC 59.966 55.000 0.00 0.00 0.00 4.85
31 32 0.681175 CCCTTTTGAAACAGGCCCAG 59.319 55.000 0.00 0.00 0.00 4.45
32 33 1.406860 GCCCTTTTGAAACAGGCCCA 61.407 55.000 0.00 0.00 37.66 5.36
33 34 1.371183 GCCCTTTTGAAACAGGCCC 59.629 57.895 0.00 0.00 37.66 5.80
35 36 1.006220 CGGCCCTTTTGAAACAGGC 60.006 57.895 8.50 8.50 43.09 4.85
36 37 0.598065 CTCGGCCCTTTTGAAACAGG 59.402 55.000 0.00 0.91 0.00 4.00
37 38 1.604604 TCTCGGCCCTTTTGAAACAG 58.395 50.000 0.00 0.00 0.00 3.16
38 39 2.060050 TTCTCGGCCCTTTTGAAACA 57.940 45.000 0.00 0.00 0.00 2.83
39 40 2.545113 GGTTTCTCGGCCCTTTTGAAAC 60.545 50.000 17.73 17.73 43.06 2.78
40 41 1.684450 GGTTTCTCGGCCCTTTTGAAA 59.316 47.619 0.00 0.00 0.00 2.69
41 42 1.324383 GGTTTCTCGGCCCTTTTGAA 58.676 50.000 0.00 0.00 0.00 2.69
42 43 0.538746 GGGTTTCTCGGCCCTTTTGA 60.539 55.000 0.00 0.00 41.63 2.69
43 44 1.964448 GGGTTTCTCGGCCCTTTTG 59.036 57.895 0.00 0.00 41.63 2.44
44 45 4.513777 GGGTTTCTCGGCCCTTTT 57.486 55.556 0.00 0.00 41.63 2.27
53 54 0.034896 TTCTGTGGCGAGGGTTTCTC 59.965 55.000 0.00 0.00 39.10 2.87
54 55 0.693049 ATTCTGTGGCGAGGGTTTCT 59.307 50.000 0.00 0.00 0.00 2.52
55 56 2.396590 TATTCTGTGGCGAGGGTTTC 57.603 50.000 0.00 0.00 0.00 2.78
56 57 2.304761 TCTTATTCTGTGGCGAGGGTTT 59.695 45.455 0.00 0.00 0.00 3.27
57 58 1.906574 TCTTATTCTGTGGCGAGGGTT 59.093 47.619 0.00 0.00 0.00 4.11
58 59 1.568504 TCTTATTCTGTGGCGAGGGT 58.431 50.000 0.00 0.00 0.00 4.34
59 60 2.168521 TCTTCTTATTCTGTGGCGAGGG 59.831 50.000 0.00 0.00 0.00 4.30
60 61 3.452474 CTCTTCTTATTCTGTGGCGAGG 58.548 50.000 0.00 0.00 0.00 4.63
61 62 3.118956 ACCTCTTCTTATTCTGTGGCGAG 60.119 47.826 0.00 0.00 0.00 5.03
62 63 2.832129 ACCTCTTCTTATTCTGTGGCGA 59.168 45.455 0.00 0.00 0.00 5.54
63 64 3.252974 ACCTCTTCTTATTCTGTGGCG 57.747 47.619 0.00 0.00 0.00 5.69
64 65 5.104900 TCCTTACCTCTTCTTATTCTGTGGC 60.105 44.000 0.00 0.00 0.00 5.01
65 66 6.381420 TCTCCTTACCTCTTCTTATTCTGTGG 59.619 42.308 0.00 0.00 0.00 4.17
66 67 7.411486 TCTCCTTACCTCTTCTTATTCTGTG 57.589 40.000 0.00 0.00 0.00 3.66
67 68 8.437274 TTTCTCCTTACCTCTTCTTATTCTGT 57.563 34.615 0.00 0.00 0.00 3.41
70 71 9.990360 CCTATTTCTCCTTACCTCTTCTTATTC 57.010 37.037 0.00 0.00 0.00 1.75
71 72 9.731001 TCCTATTTCTCCTTACCTCTTCTTATT 57.269 33.333 0.00 0.00 0.00 1.40
72 73 9.906274 ATCCTATTTCTCCTTACCTCTTCTTAT 57.094 33.333 0.00 0.00 0.00 1.73
73 74 9.369672 GATCCTATTTCTCCTTACCTCTTCTTA 57.630 37.037 0.00 0.00 0.00 2.10
74 75 8.071229 AGATCCTATTTCTCCTTACCTCTTCTT 58.929 37.037 0.00 0.00 0.00 2.52
75 76 7.601017 AGATCCTATTTCTCCTTACCTCTTCT 58.399 38.462 0.00 0.00 0.00 2.85
76 77 7.849322 AGATCCTATTTCTCCTTACCTCTTC 57.151 40.000 0.00 0.00 0.00 2.87
77 78 7.849322 GAGATCCTATTTCTCCTTACCTCTT 57.151 40.000 0.00 0.00 34.75 2.85
95 96 1.209747 AGGTTTACGCCAAGGAGATCC 59.790 52.381 0.00 0.00 0.00 3.36
96 97 2.552031 GAGGTTTACGCCAAGGAGATC 58.448 52.381 0.00 0.00 0.00 2.75
97 98 1.134788 CGAGGTTTACGCCAAGGAGAT 60.135 52.381 0.00 0.00 0.00 2.75
98 99 0.245539 CGAGGTTTACGCCAAGGAGA 59.754 55.000 0.00 0.00 0.00 3.71
99 100 0.739813 CCGAGGTTTACGCCAAGGAG 60.740 60.000 0.00 0.00 31.77 3.69
100 101 1.294138 CCGAGGTTTACGCCAAGGA 59.706 57.895 0.00 0.00 31.77 3.36
101 102 1.743995 CCCGAGGTTTACGCCAAGG 60.744 63.158 0.00 0.00 0.00 3.61
102 103 0.739813 CTCCCGAGGTTTACGCCAAG 60.740 60.000 0.00 0.00 0.00 3.61
103 104 1.294138 CTCCCGAGGTTTACGCCAA 59.706 57.895 0.00 0.00 0.00 4.52
104 105 2.652095 CCTCCCGAGGTTTACGCCA 61.652 63.158 2.31 0.00 43.61 5.69
105 106 2.186125 CCTCCCGAGGTTTACGCC 59.814 66.667 2.31 0.00 43.61 5.68
114 115 1.834263 ACAGATTTCTTCCCTCCCGAG 59.166 52.381 0.00 0.00 0.00 4.63
115 116 1.952621 ACAGATTTCTTCCCTCCCGA 58.047 50.000 0.00 0.00 0.00 5.14
116 117 2.749621 CAAACAGATTTCTTCCCTCCCG 59.250 50.000 0.00 0.00 0.00 5.14
117 118 4.013050 CTCAAACAGATTTCTTCCCTCCC 58.987 47.826 0.00 0.00 0.00 4.30
118 119 4.911390 TCTCAAACAGATTTCTTCCCTCC 58.089 43.478 0.00 0.00 0.00 4.30
119 120 6.000840 ACTTCTCAAACAGATTTCTTCCCTC 58.999 40.000 0.00 0.00 0.00 4.30
120 121 5.946486 ACTTCTCAAACAGATTTCTTCCCT 58.054 37.500 0.00 0.00 0.00 4.20
121 122 5.182190 GGACTTCTCAAACAGATTTCTTCCC 59.818 44.000 0.00 0.00 0.00 3.97
122 123 5.182190 GGGACTTCTCAAACAGATTTCTTCC 59.818 44.000 0.00 0.00 0.00 3.46
123 124 5.182190 GGGGACTTCTCAAACAGATTTCTTC 59.818 44.000 0.00 0.00 0.00 2.87
124 125 5.073428 GGGGACTTCTCAAACAGATTTCTT 58.927 41.667 0.00 0.00 0.00 2.52
125 126 4.657013 GGGGACTTCTCAAACAGATTTCT 58.343 43.478 0.00 0.00 0.00 2.52
126 127 3.437049 CGGGGACTTCTCAAACAGATTTC 59.563 47.826 0.00 0.00 0.00 2.17
127 128 3.181443 ACGGGGACTTCTCAAACAGATTT 60.181 43.478 0.00 0.00 0.00 2.17
128 129 2.372172 ACGGGGACTTCTCAAACAGATT 59.628 45.455 0.00 0.00 0.00 2.40
129 130 1.978580 ACGGGGACTTCTCAAACAGAT 59.021 47.619 0.00 0.00 0.00 2.90
130 131 1.420430 ACGGGGACTTCTCAAACAGA 58.580 50.000 0.00 0.00 0.00 3.41
131 132 1.873591 CAACGGGGACTTCTCAAACAG 59.126 52.381 0.00 0.00 0.00 3.16
132 133 1.487142 TCAACGGGGACTTCTCAAACA 59.513 47.619 0.00 0.00 0.00 2.83
133 134 2.143925 CTCAACGGGGACTTCTCAAAC 58.856 52.381 0.00 0.00 0.00 2.93
134 135 1.766496 ACTCAACGGGGACTTCTCAAA 59.234 47.619 0.00 0.00 0.00 2.69
135 136 1.420430 ACTCAACGGGGACTTCTCAA 58.580 50.000 0.00 0.00 0.00 3.02
136 137 1.420430 AACTCAACGGGGACTTCTCA 58.580 50.000 0.00 0.00 0.00 3.27
137 138 2.224209 TGAAACTCAACGGGGACTTCTC 60.224 50.000 0.00 0.00 0.00 2.87
138 139 1.766496 TGAAACTCAACGGGGACTTCT 59.234 47.619 0.00 0.00 0.00 2.85
139 140 1.871676 GTGAAACTCAACGGGGACTTC 59.128 52.381 0.00 0.00 0.00 3.01
140 141 1.476291 GGTGAAACTCAACGGGGACTT 60.476 52.381 0.00 0.00 36.74 3.01
141 142 0.108019 GGTGAAACTCAACGGGGACT 59.892 55.000 0.00 0.00 36.74 3.85
142 143 2.625375 GGTGAAACTCAACGGGGAC 58.375 57.895 0.00 0.00 36.74 4.46
148 149 4.327627 GCTAGATTCTCGGTGAAACTCAAC 59.672 45.833 5.95 0.00 38.49 3.18
149 150 4.220821 AGCTAGATTCTCGGTGAAACTCAA 59.779 41.667 5.95 0.00 38.49 3.02
150 151 3.764434 AGCTAGATTCTCGGTGAAACTCA 59.236 43.478 5.95 0.00 38.49 3.41
151 152 4.109050 CAGCTAGATTCTCGGTGAAACTC 58.891 47.826 10.90 0.00 38.49 3.01
152 153 3.764434 TCAGCTAGATTCTCGGTGAAACT 59.236 43.478 15.33 7.55 40.27 2.66
153 154 4.111375 TCAGCTAGATTCTCGGTGAAAC 57.889 45.455 15.33 0.00 38.29 2.78
154 155 4.462834 TCTTCAGCTAGATTCTCGGTGAAA 59.537 41.667 24.27 16.25 40.94 2.69
155 156 4.017126 TCTTCAGCTAGATTCTCGGTGAA 58.983 43.478 23.33 23.33 39.87 3.18
156 157 3.621558 TCTTCAGCTAGATTCTCGGTGA 58.378 45.455 14.09 14.09 33.16 4.02
157 158 4.582701 ATCTTCAGCTAGATTCTCGGTG 57.417 45.455 10.28 10.28 30.76 4.94
158 159 5.009210 GTGTATCTTCAGCTAGATTCTCGGT 59.991 44.000 4.34 0.00 36.34 4.69
159 160 5.009110 TGTGTATCTTCAGCTAGATTCTCGG 59.991 44.000 4.34 0.00 36.34 4.63
160 161 5.912396 GTGTGTATCTTCAGCTAGATTCTCG 59.088 44.000 4.34 0.00 36.34 4.04
161 162 6.040391 AGGTGTGTATCTTCAGCTAGATTCTC 59.960 42.308 4.34 2.20 39.98 2.87
162 163 5.896678 AGGTGTGTATCTTCAGCTAGATTCT 59.103 40.000 4.34 0.00 39.98 2.40
163 164 6.155475 AGGTGTGTATCTTCAGCTAGATTC 57.845 41.667 4.34 0.85 39.98 2.52
164 165 5.658634 TGAGGTGTGTATCTTCAGCTAGATT 59.341 40.000 4.34 0.00 41.47 2.40
165 166 5.204292 TGAGGTGTGTATCTTCAGCTAGAT 58.796 41.667 4.45 4.45 41.47 1.98
166 167 4.600062 TGAGGTGTGTATCTTCAGCTAGA 58.400 43.478 0.00 0.00 41.47 2.43
167 168 4.991153 TGAGGTGTGTATCTTCAGCTAG 57.009 45.455 0.00 0.00 41.47 3.42
168 169 6.183360 GGTTATGAGGTGTGTATCTTCAGCTA 60.183 42.308 0.00 0.00 41.47 3.32
169 170 5.395768 GGTTATGAGGTGTGTATCTTCAGCT 60.396 44.000 0.00 0.00 43.56 4.24
170 171 4.811557 GGTTATGAGGTGTGTATCTTCAGC 59.188 45.833 0.00 0.00 0.00 4.26
171 172 5.977635 TGGTTATGAGGTGTGTATCTTCAG 58.022 41.667 0.00 0.00 0.00 3.02
172 173 6.348498 CATGGTTATGAGGTGTGTATCTTCA 58.652 40.000 0.00 0.00 36.36 3.02
173 174 5.760253 CCATGGTTATGAGGTGTGTATCTTC 59.240 44.000 2.57 0.00 36.36 2.87
174 175 5.684704 CCATGGTTATGAGGTGTGTATCTT 58.315 41.667 2.57 0.00 36.36 2.40
175 176 4.444876 GCCATGGTTATGAGGTGTGTATCT 60.445 45.833 14.67 0.00 36.36 1.98
176 177 3.815401 GCCATGGTTATGAGGTGTGTATC 59.185 47.826 14.67 0.00 36.36 2.24
177 178 3.435026 GGCCATGGTTATGAGGTGTGTAT 60.435 47.826 14.67 0.00 36.36 2.29
178 179 2.092646 GGCCATGGTTATGAGGTGTGTA 60.093 50.000 14.67 0.00 36.36 2.90
179 180 1.340991 GGCCATGGTTATGAGGTGTGT 60.341 52.381 14.67 0.00 36.36 3.72
180 181 1.392589 GGCCATGGTTATGAGGTGTG 58.607 55.000 14.67 0.00 36.36 3.82
181 182 0.107214 CGGCCATGGTTATGAGGTGT 60.107 55.000 14.67 0.00 36.36 4.16
182 183 0.107214 ACGGCCATGGTTATGAGGTG 60.107 55.000 14.67 0.00 36.36 4.00
183 184 0.180406 GACGGCCATGGTTATGAGGT 59.820 55.000 14.67 1.02 36.36 3.85
184 185 0.535102 GGACGGCCATGGTTATGAGG 60.535 60.000 14.67 0.00 36.36 3.86
185 186 0.180171 TGGACGGCCATGGTTATGAG 59.820 55.000 5.41 1.39 39.92 2.90
186 187 2.302019 TGGACGGCCATGGTTATGA 58.698 52.632 5.41 0.00 39.92 2.15
187 188 4.975132 TGGACGGCCATGGTTATG 57.025 55.556 5.41 3.37 39.92 1.90
196 197 1.526917 CCCTCATTCATGGACGGCC 60.527 63.158 0.00 0.00 0.00 6.13
197 198 0.107214 TTCCCTCATTCATGGACGGC 60.107 55.000 0.00 0.00 0.00 5.68
198 199 1.668419 GTTCCCTCATTCATGGACGG 58.332 55.000 0.00 0.00 0.00 4.79
199 200 1.668419 GGTTCCCTCATTCATGGACG 58.332 55.000 0.00 0.00 0.00 4.79
200 201 1.410224 GGGGTTCCCTCATTCATGGAC 60.410 57.143 7.87 0.00 41.34 4.02
201 202 0.926293 GGGGTTCCCTCATTCATGGA 59.074 55.000 7.87 0.00 41.34 3.41
202 203 0.630673 TGGGGTTCCCTCATTCATGG 59.369 55.000 7.87 0.00 45.70 3.66
203 204 2.025863 GCTGGGGTTCCCTCATTCATG 61.026 57.143 7.87 0.00 45.70 3.07
204 205 0.259938 GCTGGGGTTCCCTCATTCAT 59.740 55.000 7.87 0.00 45.70 2.57
205 206 0.846427 AGCTGGGGTTCCCTCATTCA 60.846 55.000 7.87 0.00 45.70 2.57
206 207 0.332972 AAGCTGGGGTTCCCTCATTC 59.667 55.000 7.87 0.88 45.70 2.67
207 208 0.040204 CAAGCTGGGGTTCCCTCATT 59.960 55.000 7.87 0.00 45.70 2.57
208 209 1.693640 CAAGCTGGGGTTCCCTCAT 59.306 57.895 7.87 0.00 45.70 2.90
209 210 2.538141 CCAAGCTGGGGTTCCCTCA 61.538 63.158 0.00 3.74 45.70 3.86
210 211 2.356667 CCAAGCTGGGGTTCCCTC 59.643 66.667 0.00 0.00 45.70 4.30
211 212 2.452491 ACCAAGCTGGGGTTCCCT 60.452 61.111 13.11 0.00 45.70 4.20
212 213 2.035783 GACCAAGCTGGGGTTCCC 59.964 66.667 13.11 0.00 43.37 3.97
213 214 0.681243 GATGACCAAGCTGGGGTTCC 60.681 60.000 13.11 0.99 43.37 3.62
214 215 0.038166 TGATGACCAAGCTGGGGTTC 59.962 55.000 13.11 7.26 43.37 3.62
215 216 0.706433 ATGATGACCAAGCTGGGGTT 59.294 50.000 13.11 0.00 43.37 4.11
216 217 1.595311 TATGATGACCAAGCTGGGGT 58.405 50.000 13.11 11.38 43.37 4.95
217 218 2.511659 CATATGATGACCAAGCTGGGG 58.488 52.381 13.11 7.69 43.37 4.96
218 219 1.884579 GCATATGATGACCAAGCTGGG 59.115 52.381 5.25 5.25 43.37 4.45
219 220 2.812591 GAGCATATGATGACCAAGCTGG 59.187 50.000 6.97 0.00 45.02 4.85
220 221 2.812591 GGAGCATATGATGACCAAGCTG 59.187 50.000 6.97 0.00 33.57 4.24
221 222 2.440627 TGGAGCATATGATGACCAAGCT 59.559 45.455 6.97 0.00 36.11 3.74
222 223 2.854963 TGGAGCATATGATGACCAAGC 58.145 47.619 6.97 0.00 36.11 4.01
224 225 4.776435 TCTTGGAGCATATGATGACCAA 57.224 40.909 6.97 10.21 41.85 3.67
225 226 4.776435 TTCTTGGAGCATATGATGACCA 57.224 40.909 6.97 1.65 36.82 4.02
226 227 5.238214 GTCTTTCTTGGAGCATATGATGACC 59.762 44.000 6.97 0.00 0.00 4.02
227 228 5.238214 GGTCTTTCTTGGAGCATATGATGAC 59.762 44.000 6.97 1.12 0.00 3.06
228 229 5.104402 TGGTCTTTCTTGGAGCATATGATGA 60.104 40.000 6.97 0.00 36.48 2.92
229 230 5.008415 GTGGTCTTTCTTGGAGCATATGATG 59.992 44.000 6.97 0.00 41.99 3.07
230 231 5.104193 AGTGGTCTTTCTTGGAGCATATGAT 60.104 40.000 6.97 0.00 41.99 2.45
231 232 4.225942 AGTGGTCTTTCTTGGAGCATATGA 59.774 41.667 6.97 0.00 41.99 2.15
232 233 4.521146 AGTGGTCTTTCTTGGAGCATATG 58.479 43.478 0.00 0.00 41.99 1.78
233 234 4.384647 GGAGTGGTCTTTCTTGGAGCATAT 60.385 45.833 0.00 0.00 41.99 1.78
234 235 3.055094 GGAGTGGTCTTTCTTGGAGCATA 60.055 47.826 0.00 0.00 41.99 3.14
235 236 2.290577 GGAGTGGTCTTTCTTGGAGCAT 60.291 50.000 0.00 0.00 41.99 3.79
236 237 1.072331 GGAGTGGTCTTTCTTGGAGCA 59.928 52.381 0.00 0.00 38.60 4.26
237 238 1.072331 TGGAGTGGTCTTTCTTGGAGC 59.928 52.381 0.00 0.00 0.00 4.70
238 239 2.370189 AGTGGAGTGGTCTTTCTTGGAG 59.630 50.000 0.00 0.00 0.00 3.86
239 240 2.368875 GAGTGGAGTGGTCTTTCTTGGA 59.631 50.000 0.00 0.00 0.00 3.53
240 241 2.370189 AGAGTGGAGTGGTCTTTCTTGG 59.630 50.000 0.00 0.00 0.00 3.61
241 242 3.181461 ACAGAGTGGAGTGGTCTTTCTTG 60.181 47.826 0.00 0.00 0.00 3.02
242 243 3.041946 ACAGAGTGGAGTGGTCTTTCTT 58.958 45.455 0.00 0.00 0.00 2.52
243 244 2.630580 GACAGAGTGGAGTGGTCTTTCT 59.369 50.000 0.00 0.00 0.00 2.52
244 245 2.365617 TGACAGAGTGGAGTGGTCTTTC 59.634 50.000 0.00 0.00 0.00 2.62
245 246 2.398588 TGACAGAGTGGAGTGGTCTTT 58.601 47.619 0.00 0.00 0.00 2.52
246 247 2.088104 TGACAGAGTGGAGTGGTCTT 57.912 50.000 0.00 0.00 0.00 3.01
247 248 2.317371 ATGACAGAGTGGAGTGGTCT 57.683 50.000 0.00 0.00 0.00 3.85
248 249 2.826128 TGTATGACAGAGTGGAGTGGTC 59.174 50.000 0.00 0.00 0.00 4.02
249 250 2.563179 GTGTATGACAGAGTGGAGTGGT 59.437 50.000 0.00 0.00 0.00 4.16
250 251 2.093973 GGTGTATGACAGAGTGGAGTGG 60.094 54.545 0.00 0.00 0.00 4.00
251 252 2.828520 AGGTGTATGACAGAGTGGAGTG 59.171 50.000 0.00 0.00 0.00 3.51
252 253 3.176924 AGGTGTATGACAGAGTGGAGT 57.823 47.619 0.00 0.00 0.00 3.85
253 254 3.511540 TGAAGGTGTATGACAGAGTGGAG 59.488 47.826 0.00 0.00 0.00 3.86
254 255 3.506398 TGAAGGTGTATGACAGAGTGGA 58.494 45.455 0.00 0.00 0.00 4.02
255 256 3.961480 TGAAGGTGTATGACAGAGTGG 57.039 47.619 0.00 0.00 0.00 4.00
256 257 5.077134 TGATGAAGGTGTATGACAGAGTG 57.923 43.478 0.00 0.00 0.00 3.51
257 258 5.946942 ATGATGAAGGTGTATGACAGAGT 57.053 39.130 0.00 0.00 0.00 3.24
258 259 7.894708 AGATATGATGAAGGTGTATGACAGAG 58.105 38.462 0.00 0.00 0.00 3.35
259 260 7.846101 AGATATGATGAAGGTGTATGACAGA 57.154 36.000 0.00 0.00 0.00 3.41
260 261 9.416794 GTTAGATATGATGAAGGTGTATGACAG 57.583 37.037 0.00 0.00 0.00 3.51
261 262 9.147732 AGTTAGATATGATGAAGGTGTATGACA 57.852 33.333 0.00 0.00 0.00 3.58
262 263 9.988815 AAGTTAGATATGATGAAGGTGTATGAC 57.011 33.333 0.00 0.00 0.00 3.06
267 268 9.823647 CAGTTAAGTTAGATATGATGAAGGTGT 57.176 33.333 0.00 0.00 0.00 4.16
268 269 8.768955 GCAGTTAAGTTAGATATGATGAAGGTG 58.231 37.037 0.00 0.00 0.00 4.00
269 270 7.653713 CGCAGTTAAGTTAGATATGATGAAGGT 59.346 37.037 0.00 0.00 0.00 3.50
270 271 7.359598 GCGCAGTTAAGTTAGATATGATGAAGG 60.360 40.741 0.30 0.00 0.00 3.46
271 272 7.169813 TGCGCAGTTAAGTTAGATATGATGAAG 59.830 37.037 5.66 0.00 0.00 3.02
272 273 6.983890 TGCGCAGTTAAGTTAGATATGATGAA 59.016 34.615 5.66 0.00 0.00 2.57
273 274 6.512297 TGCGCAGTTAAGTTAGATATGATGA 58.488 36.000 5.66 0.00 0.00 2.92
274 275 6.769608 TGCGCAGTTAAGTTAGATATGATG 57.230 37.500 5.66 0.00 0.00 3.07
275 276 9.658799 ATTATGCGCAGTTAAGTTAGATATGAT 57.341 29.630 18.32 0.00 0.00 2.45
276 277 8.925700 CATTATGCGCAGTTAAGTTAGATATGA 58.074 33.333 18.32 0.00 0.00 2.15
277 278 8.171196 CCATTATGCGCAGTTAAGTTAGATATG 58.829 37.037 18.32 3.29 0.00 1.78
278 279 7.878127 ACCATTATGCGCAGTTAAGTTAGATAT 59.122 33.333 18.32 0.00 0.00 1.63
279 280 7.214381 ACCATTATGCGCAGTTAAGTTAGATA 58.786 34.615 18.32 0.00 0.00 1.98
280 281 6.055588 ACCATTATGCGCAGTTAAGTTAGAT 58.944 36.000 18.32 0.00 0.00 1.98
281 282 5.424757 ACCATTATGCGCAGTTAAGTTAGA 58.575 37.500 18.32 0.00 0.00 2.10
282 283 5.734855 ACCATTATGCGCAGTTAAGTTAG 57.265 39.130 18.32 3.78 0.00 2.34
283 284 6.373216 AGAAACCATTATGCGCAGTTAAGTTA 59.627 34.615 18.32 0.00 0.00 2.24
284 285 5.183140 AGAAACCATTATGCGCAGTTAAGTT 59.817 36.000 18.32 13.80 0.00 2.66
285 286 4.700213 AGAAACCATTATGCGCAGTTAAGT 59.300 37.500 18.32 7.85 0.00 2.24
286 287 5.235305 AGAAACCATTATGCGCAGTTAAG 57.765 39.130 18.32 7.13 0.00 1.85
287 288 5.392595 GGAAGAAACCATTATGCGCAGTTAA 60.393 40.000 18.32 11.36 0.00 2.01
288 289 4.095782 GGAAGAAACCATTATGCGCAGTTA 59.904 41.667 18.32 0.23 0.00 2.24
289 290 3.119495 GGAAGAAACCATTATGCGCAGTT 60.119 43.478 18.32 11.44 0.00 3.16
290 291 2.423538 GGAAGAAACCATTATGCGCAGT 59.576 45.455 18.32 4.51 0.00 4.40
291 292 2.539547 CGGAAGAAACCATTATGCGCAG 60.540 50.000 18.32 3.73 0.00 5.18
292 293 1.400142 CGGAAGAAACCATTATGCGCA 59.600 47.619 14.96 14.96 0.00 6.09
293 294 1.859998 GCGGAAGAAACCATTATGCGC 60.860 52.381 0.00 0.00 43.10 6.09
294 295 1.670811 AGCGGAAGAAACCATTATGCG 59.329 47.619 0.00 0.00 0.00 4.73
295 296 3.489229 GGAAGCGGAAGAAACCATTATGC 60.489 47.826 0.00 0.00 0.00 3.14
296 297 3.947834 AGGAAGCGGAAGAAACCATTATG 59.052 43.478 0.00 0.00 0.00 1.90
297 298 4.236527 AGGAAGCGGAAGAAACCATTAT 57.763 40.909 0.00 0.00 0.00 1.28
298 299 3.713826 AGGAAGCGGAAGAAACCATTA 57.286 42.857 0.00 0.00 0.00 1.90
299 300 2.558359 CAAGGAAGCGGAAGAAACCATT 59.442 45.455 0.00 0.00 0.00 3.16
300 301 2.162681 CAAGGAAGCGGAAGAAACCAT 58.837 47.619 0.00 0.00 0.00 3.55
301 302 1.133915 ACAAGGAAGCGGAAGAAACCA 60.134 47.619 0.00 0.00 0.00 3.67
302 303 1.605753 ACAAGGAAGCGGAAGAAACC 58.394 50.000 0.00 0.00 0.00 3.27
303 304 2.031069 GGAACAAGGAAGCGGAAGAAAC 60.031 50.000 0.00 0.00 0.00 2.78
304 305 2.227194 GGAACAAGGAAGCGGAAGAAA 58.773 47.619 0.00 0.00 0.00 2.52
305 306 1.142060 TGGAACAAGGAAGCGGAAGAA 59.858 47.619 0.00 0.00 31.92 2.52
306 307 0.762418 TGGAACAAGGAAGCGGAAGA 59.238 50.000 0.00 0.00 31.92 2.87
307 308 3.322514 TGGAACAAGGAAGCGGAAG 57.677 52.632 0.00 0.00 31.92 3.46
316 317 6.160749 TGCGTTCATGCTATTGGAACAAGG 62.161 45.833 0.00 0.00 40.62 3.61
317 318 3.119884 TGCGTTCATGCTATTGGAACAAG 60.120 43.478 0.00 0.00 40.62 3.16
318 319 2.816672 TGCGTTCATGCTATTGGAACAA 59.183 40.909 0.00 0.00 40.62 2.83
319 320 2.161410 GTGCGTTCATGCTATTGGAACA 59.839 45.455 0.00 0.00 40.62 3.18
320 321 2.420022 AGTGCGTTCATGCTATTGGAAC 59.580 45.455 0.00 0.00 38.00 3.62
321 322 2.677836 GAGTGCGTTCATGCTATTGGAA 59.322 45.455 0.00 0.00 35.36 3.53
322 323 2.279741 GAGTGCGTTCATGCTATTGGA 58.720 47.619 0.00 0.00 35.36 3.53
323 324 2.009051 TGAGTGCGTTCATGCTATTGG 58.991 47.619 0.00 0.00 35.36 3.16
324 325 3.957671 ATGAGTGCGTTCATGCTATTG 57.042 42.857 2.30 0.00 36.48 1.90
325 326 4.024556 GCTTATGAGTGCGTTCATGCTATT 60.025 41.667 11.74 0.00 38.25 1.73
326 327 3.496130 GCTTATGAGTGCGTTCATGCTAT 59.504 43.478 11.74 0.00 38.25 2.97
327 328 2.866156 GCTTATGAGTGCGTTCATGCTA 59.134 45.455 11.74 0.00 38.25 3.49
328 329 1.667724 GCTTATGAGTGCGTTCATGCT 59.332 47.619 11.74 0.00 38.25 3.79
329 330 1.398041 TGCTTATGAGTGCGTTCATGC 59.602 47.619 11.74 8.61 38.25 4.06
330 331 3.603173 CGATGCTTATGAGTGCGTTCATG 60.603 47.826 11.74 0.00 38.25 3.07
331 332 2.541346 CGATGCTTATGAGTGCGTTCAT 59.459 45.455 7.74 7.74 40.70 2.57
332 333 1.926510 CGATGCTTATGAGTGCGTTCA 59.073 47.619 0.00 0.00 0.00 3.18
333 334 1.332377 GCGATGCTTATGAGTGCGTTC 60.332 52.381 0.00 0.00 0.00 3.95
334 335 0.652592 GCGATGCTTATGAGTGCGTT 59.347 50.000 0.00 0.00 0.00 4.84
335 336 1.482621 CGCGATGCTTATGAGTGCGT 61.483 55.000 0.00 0.00 39.31 5.24
336 337 1.200103 CGCGATGCTTATGAGTGCG 59.800 57.895 0.00 0.00 38.04 5.34
337 338 0.875908 TCCGCGATGCTTATGAGTGC 60.876 55.000 8.23 0.00 0.00 4.40
338 339 0.855349 GTCCGCGATGCTTATGAGTG 59.145 55.000 8.23 0.00 0.00 3.51
339 340 0.459899 TGTCCGCGATGCTTATGAGT 59.540 50.000 8.23 0.00 0.00 3.41
340 341 1.788258 ATGTCCGCGATGCTTATGAG 58.212 50.000 8.23 0.00 0.00 2.90
341 342 1.866601 CAATGTCCGCGATGCTTATGA 59.133 47.619 8.23 0.00 0.00 2.15
342 343 1.599071 ACAATGTCCGCGATGCTTATG 59.401 47.619 8.23 0.00 0.00 1.90
343 344 1.867233 GACAATGTCCGCGATGCTTAT 59.133 47.619 8.23 0.00 0.00 1.73
344 345 1.286501 GACAATGTCCGCGATGCTTA 58.713 50.000 8.23 0.00 0.00 3.09
345 346 1.695893 CGACAATGTCCGCGATGCTT 61.696 55.000 8.23 0.00 0.00 3.91
346 347 2.167219 CGACAATGTCCGCGATGCT 61.167 57.895 8.23 0.00 0.00 3.79
347 348 2.321060 CGACAATGTCCGCGATGC 59.679 61.111 8.23 0.00 0.00 3.91
348 349 1.358725 AACCGACAATGTCCGCGATG 61.359 55.000 8.23 0.56 0.00 3.84
349 350 0.173935 TAACCGACAATGTCCGCGAT 59.826 50.000 8.23 0.00 0.00 4.58
350 351 0.038435 TTAACCGACAATGTCCGCGA 60.038 50.000 8.23 0.00 0.00 5.87
351 352 0.791422 TTTAACCGACAATGTCCGCG 59.209 50.000 7.91 0.00 0.00 6.46
352 353 2.224784 ACTTTTAACCGACAATGTCCGC 59.775 45.455 7.91 0.00 0.00 5.54
353 354 3.744426 AGACTTTTAACCGACAATGTCCG 59.256 43.478 7.91 3.92 30.80 4.79
354 355 5.121298 GGTAGACTTTTAACCGACAATGTCC 59.879 44.000 7.91 0.00 30.80 4.02
355 356 5.121298 GGGTAGACTTTTAACCGACAATGTC 59.879 44.000 2.75 2.75 33.89 3.06
356 357 4.999311 GGGTAGACTTTTAACCGACAATGT 59.001 41.667 0.00 0.00 33.89 2.71
357 358 5.541098 GGGTAGACTTTTAACCGACAATG 57.459 43.478 0.00 0.00 33.89 2.82
364 365 2.079158 GTGCCGGGTAGACTTTTAACC 58.921 52.381 2.18 0.00 0.00 2.85
365 366 2.079158 GGTGCCGGGTAGACTTTTAAC 58.921 52.381 2.18 0.00 0.00 2.01
366 367 1.698532 TGGTGCCGGGTAGACTTTTAA 59.301 47.619 2.18 0.00 0.00 1.52
367 368 1.350071 TGGTGCCGGGTAGACTTTTA 58.650 50.000 2.18 0.00 0.00 1.52
368 369 0.475044 TTGGTGCCGGGTAGACTTTT 59.525 50.000 2.18 0.00 0.00 2.27
369 370 0.250597 GTTGGTGCCGGGTAGACTTT 60.251 55.000 2.18 0.00 0.00 2.66
370 371 1.373812 GTTGGTGCCGGGTAGACTT 59.626 57.895 2.18 0.00 0.00 3.01
371 372 2.939261 CGTTGGTGCCGGGTAGACT 61.939 63.158 2.18 0.00 0.00 3.24
372 373 2.433664 CGTTGGTGCCGGGTAGAC 60.434 66.667 2.18 0.00 0.00 2.59
373 374 4.382320 GCGTTGGTGCCGGGTAGA 62.382 66.667 2.18 0.00 0.00 2.59
374 375 4.690719 TGCGTTGGTGCCGGGTAG 62.691 66.667 2.18 0.00 0.00 3.18
375 376 4.992511 GTGCGTTGGTGCCGGGTA 62.993 66.667 2.18 0.00 0.00 3.69
378 379 2.255172 TAAAGTGCGTTGGTGCCGG 61.255 57.895 0.00 0.00 0.00 6.13
379 380 1.082366 GTAAAGTGCGTTGGTGCCG 60.082 57.895 0.00 0.00 0.00 5.69
380 381 0.317519 GTGTAAAGTGCGTTGGTGCC 60.318 55.000 0.00 0.00 0.00 5.01
381 382 0.317519 GGTGTAAAGTGCGTTGGTGC 60.318 55.000 0.00 0.00 0.00 5.01
382 383 1.018148 TGGTGTAAAGTGCGTTGGTG 58.982 50.000 0.00 0.00 0.00 4.17
383 384 1.673920 CTTGGTGTAAAGTGCGTTGGT 59.326 47.619 0.00 0.00 0.00 3.67
384 385 1.599419 GCTTGGTGTAAAGTGCGTTGG 60.599 52.381 0.00 0.00 0.00 3.77
385 386 1.064803 TGCTTGGTGTAAAGTGCGTTG 59.935 47.619 0.00 0.00 0.00 4.10
386 387 1.384525 TGCTTGGTGTAAAGTGCGTT 58.615 45.000 0.00 0.00 0.00 4.84
387 388 1.535462 GATGCTTGGTGTAAAGTGCGT 59.465 47.619 0.00 0.00 0.00 5.24
388 389 1.464023 CGATGCTTGGTGTAAAGTGCG 60.464 52.381 0.00 0.00 0.00 5.34
389 390 1.729149 GCGATGCTTGGTGTAAAGTGC 60.729 52.381 0.00 0.00 0.00 4.40
390 391 1.464023 CGCGATGCTTGGTGTAAAGTG 60.464 52.381 0.00 0.00 0.00 3.16
391 392 0.796312 CGCGATGCTTGGTGTAAAGT 59.204 50.000 0.00 0.00 0.00 2.66
392 393 0.096976 CCGCGATGCTTGGTGTAAAG 59.903 55.000 8.23 0.00 0.00 1.85
393 394 0.320858 TCCGCGATGCTTGGTGTAAA 60.321 50.000 8.23 0.00 0.00 2.01
394 395 0.107897 ATCCGCGATGCTTGGTGTAA 60.108 50.000 8.23 0.00 0.00 2.41
395 396 0.809636 CATCCGCGATGCTTGGTGTA 60.810 55.000 8.23 0.00 33.17 2.90
396 397 2.108514 CATCCGCGATGCTTGGTGT 61.109 57.895 8.23 0.00 33.17 4.16
397 398 1.647545 AACATCCGCGATGCTTGGTG 61.648 55.000 8.23 0.00 43.15 4.17
398 399 0.960364 AAACATCCGCGATGCTTGGT 60.960 50.000 8.23 0.00 43.15 3.67
399 400 0.171007 AAAACATCCGCGATGCTTGG 59.829 50.000 8.23 0.00 43.15 3.61
400 401 1.131126 AGAAAACATCCGCGATGCTTG 59.869 47.619 8.23 0.00 43.15 4.01
401 402 1.453155 AGAAAACATCCGCGATGCTT 58.547 45.000 8.23 4.51 43.15 3.91
402 403 1.131126 CAAGAAAACATCCGCGATGCT 59.869 47.619 8.23 0.00 43.15 3.79
403 404 1.538276 CAAGAAAACATCCGCGATGC 58.462 50.000 8.23 0.00 43.15 3.91
404 405 1.131126 AGCAAGAAAACATCCGCGATG 59.869 47.619 8.23 12.33 44.71 3.84
405 406 1.453155 AGCAAGAAAACATCCGCGAT 58.547 45.000 8.23 0.00 33.34 4.58
406 407 1.999735 CTAGCAAGAAAACATCCGCGA 59.000 47.619 8.23 0.00 33.34 5.87
407 408 1.062587 CCTAGCAAGAAAACATCCGCG 59.937 52.381 0.00 0.00 33.34 6.46
408 409 1.401905 CCCTAGCAAGAAAACATCCGC 59.598 52.381 0.00 0.00 0.00 5.54
409 410 2.985896 TCCCTAGCAAGAAAACATCCG 58.014 47.619 0.00 0.00 0.00 4.18
410 411 5.722021 TTTTCCCTAGCAAGAAAACATCC 57.278 39.130 8.60 0.00 37.13 3.51
535 536 4.605968 TGGAACACGAAACACAATTCATG 58.394 39.130 0.00 0.00 0.00 3.07
567 568 7.308529 CCCACAAAAATTCTTTTAAATCCAGGC 60.309 37.037 0.00 0.00 32.85 4.85
693 694 5.909610 CGACAGAAACTGAATCCTTGAAAAC 59.090 40.000 5.76 0.00 35.18 2.43
868 869 8.615878 TCTAAATCTTGCTACAAGCTTGTTTA 57.384 30.769 35.20 22.29 42.97 2.01
1840 1841 4.498241 CTGTCAATCAAGAGGTTCGATCA 58.502 43.478 0.00 0.00 0.00 2.92
2340 2343 5.515106 AGCAAGGAGTCTATGAGAACTACT 58.485 41.667 0.00 0.00 0.00 2.57
2704 2707 9.813080 GATTGTGTGAAATTAGACTTTACACTC 57.187 33.333 10.64 0.00 38.15 3.51
2737 2740 8.454106 TCTTGCTTTTGAGTGCTATAATCTTTC 58.546 33.333 0.00 0.00 0.00 2.62
2836 2845 9.649316 GGTCCTGGACTAGCTATAATATCTAAT 57.351 37.037 25.01 0.00 32.47 1.73
2892 2901 1.802960 CAGCGTTTCAGCAAGATGAGT 59.197 47.619 0.00 0.00 40.15 3.41
2915 2925 7.571080 TGGGTCAAACTAACTTATCGTTTTT 57.429 32.000 0.00 0.00 37.05 1.94
2968 2978 9.227777 AGGGACAAGTTAAAAGTGATACAATAC 57.772 33.333 0.00 0.00 0.00 1.89
2971 2981 9.802039 ATAAGGGACAAGTTAAAAGTGATACAA 57.198 29.630 0.00 0.00 0.00 2.41
2999 3009 5.960202 AGGCTGTTTTCATTTCAGGGATAAT 59.040 36.000 0.00 0.00 0.00 1.28
3012 3022 5.420739 AGACCTTTTGTTTAGGCTGTTTTCA 59.579 36.000 0.00 0.00 36.17 2.69
3017 3027 5.048013 GCATAAGACCTTTTGTTTAGGCTGT 60.048 40.000 0.00 0.00 36.17 4.40
3022 3032 7.867403 ACAATGTGCATAAGACCTTTTGTTTAG 59.133 33.333 0.00 0.00 0.00 1.85
3024 3034 6.581712 ACAATGTGCATAAGACCTTTTGTTT 58.418 32.000 0.00 0.00 0.00 2.83
3117 3137 9.675464 TTATGGGTAACACCTAACTTTGATTAG 57.325 33.333 0.00 0.00 38.64 1.73
3263 3284 4.972568 TCAAGGCCAACTATTATACCCAGA 59.027 41.667 5.01 0.00 0.00 3.86
3269 3290 7.013274 GCAGACATTTCAAGGCCAACTATTATA 59.987 37.037 5.01 0.00 0.00 0.98
3306 3327 3.369546 AAAAAGCAAACCACCAGATCG 57.630 42.857 0.00 0.00 0.00 3.69
3356 3397 7.817418 TGCTTATCCCCTGTATTTTGATTAC 57.183 36.000 0.00 0.00 0.00 1.89
3382 3424 5.041951 TGATTTTTGCGCGAGTTTTCTAT 57.958 34.783 12.10 0.00 0.00 1.98
3434 3487 1.218763 CAATCTGCGCATCTCCTCTG 58.781 55.000 12.24 0.00 0.00 3.35
3494 3547 4.098722 AGAGGCCAGCTGCTGAGC 62.099 66.667 30.10 27.27 46.64 4.26
3529 3582 1.974236 CTCTCTCCTGTTGGGTGTTCT 59.026 52.381 0.00 0.00 36.25 3.01
3530 3583 1.002544 CCTCTCTCCTGTTGGGTGTTC 59.997 57.143 0.00 0.00 36.25 3.18
3549 3602 5.940470 TCCTAAGAAAACTCAAGCAATCTCC 59.060 40.000 0.00 0.00 0.00 3.71
3557 3610 6.147821 TGAATCGCTTCCTAAGAAAACTCAAG 59.852 38.462 0.00 0.00 0.00 3.02
3630 3685 0.602638 TGCCTAGGTTTGTGCGTCAG 60.603 55.000 11.31 0.00 0.00 3.51
3631 3686 0.882927 GTGCCTAGGTTTGTGCGTCA 60.883 55.000 11.31 0.00 0.00 4.35
3979 5245 4.360951 AAGGATCCCACGTACAGAAAAA 57.639 40.909 8.55 0.00 0.00 1.94
4000 5266 2.364632 CGTGGCTGAACCCATCAAATA 58.635 47.619 0.00 0.00 37.67 1.40
4026 5292 2.906691 TTTTGGCATGAACCCAACAG 57.093 45.000 0.00 0.00 41.77 3.16
4060 5326 2.218759 CGATTTTTCCGTCGCTCCATAG 59.781 50.000 0.00 0.00 0.00 2.23
4061 5327 2.198406 CGATTTTTCCGTCGCTCCATA 58.802 47.619 0.00 0.00 0.00 2.74
4062 5328 1.006832 CGATTTTTCCGTCGCTCCAT 58.993 50.000 0.00 0.00 0.00 3.41
4101 5367 2.049063 GAGCCAGCGTTGAGTCGT 60.049 61.111 0.00 0.00 0.00 4.34
4129 5395 5.479124 ACTAAGGTTACCACTTACCACTG 57.521 43.478 3.51 0.00 36.87 3.66
4130 5396 5.744007 GCAACTAAGGTTACCACTTACCACT 60.744 44.000 3.51 0.00 36.87 4.00
4131 5397 4.453478 GCAACTAAGGTTACCACTTACCAC 59.547 45.833 3.51 0.00 36.87 4.16
4132 5398 4.348754 AGCAACTAAGGTTACCACTTACCA 59.651 41.667 3.51 0.00 36.87 3.25
4133 5399 4.694037 CAGCAACTAAGGTTACCACTTACC 59.306 45.833 3.51 0.00 33.88 2.85
4134 5400 4.153655 GCAGCAACTAAGGTTACCACTTAC 59.846 45.833 3.51 0.00 33.88 2.34
4368 6071 0.604578 ATGGTGATGTTGGCAAGTGC 59.395 50.000 0.00 0.00 41.14 4.40
5102 6814 4.324254 GGGGGTTCTTGTTGTGAGATGATA 60.324 45.833 0.00 0.00 0.00 2.15
5233 6945 1.836166 CTCCTGAGCTTCCTTCCATGA 59.164 52.381 0.00 0.00 0.00 3.07
5526 7238 8.159229 AGAGTATATAAACACCCCCAATATCC 57.841 38.462 0.00 0.00 0.00 2.59
5532 7244 9.678981 AGTTTATAGAGTATATAAACACCCCCA 57.321 33.333 28.93 1.67 45.61 4.96
5533 7245 9.939802 CAGTTTATAGAGTATATAAACACCCCC 57.060 37.037 28.93 11.69 45.61 5.40
5550 7346 4.662145 CCCTGCGCTTTTTCAGTTTATAG 58.338 43.478 9.73 0.00 0.00 1.31
5745 7612 2.740826 CCGCGACGACCCAAACAT 60.741 61.111 8.23 0.00 0.00 2.71
5809 7687 1.653094 GCCGCAAATGGATCCACGAA 61.653 55.000 18.99 0.00 0.00 3.85
5810 7688 2.112198 GCCGCAAATGGATCCACGA 61.112 57.895 18.99 0.00 0.00 4.35
5953 7892 0.469144 AAAAGGCCAACCACCGTCAT 60.469 50.000 5.01 0.00 39.06 3.06
5954 7893 0.684805 AAAAAGGCCAACCACCGTCA 60.685 50.000 5.01 0.00 39.06 4.35
5983 7922 2.046796 ACACACACACACCGCACA 60.047 55.556 0.00 0.00 0.00 4.57
6041 7982 3.641234 GAGCACATGGGTGATGAGATGC 61.641 54.545 0.00 0.00 45.14 3.91
6055 7996 4.195334 GCCGATGGGGGAGCACAT 62.195 66.667 0.00 0.00 35.78 3.21
6216 8387 1.669115 CTCCCAGTGCCACTTCACG 60.669 63.158 0.00 0.00 41.61 4.35
6237 8425 1.153086 GTAGGGGAGTAGGACGCGA 60.153 63.158 15.93 0.00 0.00 5.87
6245 8433 2.308722 ACGTCGGGGTAGGGGAGTA 61.309 63.158 0.00 0.00 0.00 2.59
6246 8434 3.665971 ACGTCGGGGTAGGGGAGT 61.666 66.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.