Multiple sequence alignment - TraesCS5B01G107200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G107200 chr5B 100.000 3295 0 0 1 3295 145928094 145924800 0.000000e+00 6085.0
1 TraesCS5B01G107200 chr5B 100.000 2956 0 0 3498 6453 145924597 145921642 0.000000e+00 5459.0
2 TraesCS5B01G107200 chr5B 95.556 45 1 1 3747 3790 145924317 145924273 3.230000e-08 71.3
3 TraesCS5B01G107200 chr5B 95.556 45 1 1 3778 3822 145924348 145924305 3.230000e-08 71.3
4 TraesCS5B01G107200 chr5D 93.263 2182 99 29 536 2711 134484132 134481993 0.000000e+00 3171.0
5 TraesCS5B01G107200 chr5D 92.888 1392 53 18 4618 6000 134479422 134478068 0.000000e+00 1980.0
6 TraesCS5B01G107200 chr5D 75.851 969 147 45 3498 4441 134480367 134479461 4.660000e-111 412.0
7 TraesCS5B01G107200 chr5D 90.850 153 12 2 4436 4588 274578142 274577992 3.050000e-48 204.0
8 TraesCS5B01G107200 chr5A 93.969 1542 66 9 536 2056 158658995 158657460 0.000000e+00 2307.0
9 TraesCS5B01G107200 chr5A 93.401 1379 72 12 4735 6104 158653348 158651980 0.000000e+00 2025.0
10 TraesCS5B01G107200 chr5A 87.092 612 44 14 2707 3288 158655208 158654602 0.000000e+00 660.0
11 TraesCS5B01G107200 chr5A 82.578 706 67 11 3778 4446 158654322 158653636 7.260000e-159 571.0
12 TraesCS5B01G107200 chr5A 90.137 365 20 12 2060 2422 158657174 158656824 1.640000e-125 460.0
13 TraesCS5B01G107200 chr5A 93.981 216 11 2 2412 2627 158656739 158656526 6.240000e-85 326.0
14 TraesCS5B01G107200 chr5A 94.767 172 6 3 4563 4732 158653632 158653462 1.380000e-66 265.0
15 TraesCS5B01G107200 chr5A 90.374 187 17 1 6253 6438 158650190 158650004 1.800000e-60 244.0
16 TraesCS5B01G107200 chr5A 94.203 138 7 1 4436 4573 290391731 290391867 6.560000e-50 209.0
17 TraesCS5B01G107200 chr5A 87.143 70 2 5 175 244 513631490 513631428 8.970000e-09 73.1
18 TraesCS5B01G107200 chr4B 90.706 538 32 7 1 536 505416908 505416387 0.000000e+00 701.0
19 TraesCS5B01G107200 chr4B 77.599 558 103 20 4856 5402 529356521 529355975 1.040000e-82 318.0
20 TraesCS5B01G107200 chr4B 96.296 135 4 1 4438 4572 565737048 565737181 3.030000e-53 220.0
21 TraesCS5B01G107200 chr4B 84.112 107 11 3 1117 1220 494227744 494227641 1.480000e-16 99.0
22 TraesCS5B01G107200 chr1B 96.420 419 11 2 1 418 683367719 683367304 0.000000e+00 688.0
23 TraesCS5B01G107200 chr1B 95.745 47 2 0 493 539 490000665 490000619 6.940000e-10 76.8
24 TraesCS5B01G107200 chr3A 93.363 452 23 4 1 452 627979041 627979485 0.000000e+00 662.0
25 TraesCS5B01G107200 chr3A 100.000 43 0 0 493 535 538019476 538019434 5.360000e-11 80.5
26 TraesCS5B01G107200 chr3B 96.730 367 6 2 1 367 819876692 819876332 1.990000e-169 606.0
27 TraesCS5B01G107200 chr3B 95.489 133 6 0 4436 4568 655849455 655849587 5.070000e-51 213.0
28 TraesCS5B01G107200 chr3B 95.522 67 3 0 356 422 819876221 819876155 2.460000e-19 108.0
29 TraesCS5B01G107200 chr3B 88.095 84 8 2 6071 6152 405228774 405228857 1.480000e-16 99.0
30 TraesCS5B01G107200 chr3B 83.721 86 13 1 6069 6153 621148619 621148534 5.360000e-11 80.5
31 TraesCS5B01G107200 chr3B 97.674 43 1 0 493 535 29354239 29354281 2.500000e-09 75.0
32 TraesCS5B01G107200 chr3B 100.000 39 0 0 497 535 819875992 819875954 8.970000e-09 73.1
33 TraesCS5B01G107200 chr4A 90.110 455 30 10 1 452 688405226 688405668 1.560000e-160 577.0
34 TraesCS5B01G107200 chr4A 77.639 559 103 20 4856 5403 32592875 32592328 2.900000e-83 320.0
35 TraesCS5B01G107200 chr4A 83.962 106 11 3 1118 1220 58115441 58115339 5.330000e-16 97.1
36 TraesCS5B01G107200 chr4D 77.281 559 103 22 4856 5402 430878387 430877841 2.260000e-79 307.0
37 TraesCS5B01G107200 chr4D 84.112 107 11 3 1117 1220 399962537 399962434 1.480000e-16 99.0
38 TraesCS5B01G107200 chr7A 88.703 239 21 6 217 452 720787912 720788147 2.940000e-73 287.0
39 TraesCS5B01G107200 chr7A 87.059 85 10 1 6069 6152 225617350 225617434 1.920000e-15 95.3
40 TraesCS5B01G107200 chr2B 74.153 561 135 9 4848 5403 3738765 3738210 2.340000e-54 224.0
41 TraesCS5B01G107200 chr2B 73.975 561 136 9 4848 5403 4117650 4117095 1.090000e-52 219.0
42 TraesCS5B01G107200 chr2B 93.571 140 8 1 4436 4574 39787851 39787712 2.360000e-49 207.0
43 TraesCS5B01G107200 chr2B 95.833 48 2 0 490 537 647740157 647740204 1.930000e-10 78.7
44 TraesCS5B01G107200 chr2D 74.147 557 128 13 4855 5403 7667417 7666869 3.920000e-52 217.0
45 TraesCS5B01G107200 chr2D 82.474 97 15 2 6057 6153 592184433 592184527 4.150000e-12 84.2
46 TraesCS5B01G107200 chr2D 97.727 44 1 0 493 536 622017666 622017623 6.940000e-10 76.8
47 TraesCS5B01G107200 chr2D 97.674 43 1 0 493 535 5394127 5394169 2.500000e-09 75.0
48 TraesCS5B01G107200 chr6B 92.361 144 9 2 4435 4577 423196018 423195876 3.050000e-48 204.0
49 TraesCS5B01G107200 chr6B 90.728 151 11 3 4428 4578 192090301 192090154 1.420000e-46 198.0
50 TraesCS5B01G107200 chr6B 88.571 70 1 5 175 244 89054533 89054595 1.930000e-10 78.7
51 TraesCS5B01G107200 chr6B 95.745 47 2 0 490 536 165073696 165073742 6.940000e-10 76.8
52 TraesCS5B01G107200 chr7D 92.806 139 10 0 4436 4574 123147705 123147843 1.100000e-47 202.0
53 TraesCS5B01G107200 chr7D 87.013 77 5 5 170 244 82352670 82352743 1.490000e-11 82.4
54 TraesCS5B01G107200 chr3D 91.667 144 12 0 4436 4579 7607524 7607381 3.950000e-47 200.0
55 TraesCS5B01G107200 chr6A 91.026 78 5 2 6065 6141 478928035 478928111 3.180000e-18 104.0
56 TraesCS5B01G107200 chr6A 86.747 83 10 1 6069 6151 66388162 66388081 2.480000e-14 91.6
57 TraesCS5B01G107200 chrUn 93.651 63 3 1 6089 6150 48429979 48429917 6.890000e-15 93.5
58 TraesCS5B01G107200 chr1A 92.424 66 4 1 6086 6150 570140577 570140512 6.890000e-15 93.5
59 TraesCS5B01G107200 chr1A 83.146 89 13 1 6069 6155 490312202 490312114 5.360000e-11 80.5
60 TraesCS5B01G107200 chr7B 83.750 80 9 4 166 243 643476766 643476843 8.970000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G107200 chr5B 145921642 145928094 6452 True 2921.650000 6085 97.778000 1 6453 4 chr5B.!!$R1 6452
1 TraesCS5B01G107200 chr5D 134478068 134484132 6064 True 1854.333333 3171 87.334000 536 6000 3 chr5D.!!$R2 5464
2 TraesCS5B01G107200 chr5A 158650004 158658995 8991 True 857.250000 2307 90.787375 536 6438 8 chr5A.!!$R2 5902
3 TraesCS5B01G107200 chr4B 505416387 505416908 521 True 701.000000 701 90.706000 1 536 1 chr4B.!!$R2 535
4 TraesCS5B01G107200 chr4B 529355975 529356521 546 True 318.000000 318 77.599000 4856 5402 1 chr4B.!!$R3 546
5 TraesCS5B01G107200 chr3B 819875954 819876692 738 True 262.366667 606 97.417333 1 535 3 chr3B.!!$R2 534
6 TraesCS5B01G107200 chr4A 32592328 32592875 547 True 320.000000 320 77.639000 4856 5403 1 chr4A.!!$R1 547
7 TraesCS5B01G107200 chr4D 430877841 430878387 546 True 307.000000 307 77.281000 4856 5402 1 chr4D.!!$R2 546
8 TraesCS5B01G107200 chr2B 3738210 3738765 555 True 224.000000 224 74.153000 4848 5403 1 chr2B.!!$R1 555
9 TraesCS5B01G107200 chr2B 4117095 4117650 555 True 219.000000 219 73.975000 4848 5403 1 chr2B.!!$R2 555
10 TraesCS5B01G107200 chr2D 7666869 7667417 548 True 217.000000 217 74.147000 4855 5403 1 chr2D.!!$R1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 581 0.250295 TAGTTGGCTATGCGCATCCC 60.250 55.0 29.11 26.71 41.67 3.85 F
895 1116 0.524862 CTCTCCACCATTGCACAAGC 59.475 55.0 0.00 0.00 42.57 4.01 F
1593 1837 0.036732 TCTCTCACCACCATGTTGCC 59.963 55.0 0.00 0.00 0.00 4.52 F
1594 1838 0.037303 CTCTCACCACCATGTTGCCT 59.963 55.0 0.00 0.00 0.00 4.75 F
3066 6004 0.395724 TGCCTGCCACTCTCTATCGA 60.396 55.0 0.00 0.00 0.00 3.59 F
3695 6642 0.178873 TGGTTAGCTCCTGGTCCCTT 60.179 55.0 0.00 0.00 0.00 3.95 F
4002 6950 0.108186 GTCGCACCATCATCCTCACA 60.108 55.0 0.00 0.00 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1574 1818 0.036732 GGCAACATGGTGGTGAGAGA 59.963 55.0 13.78 0.00 37.20 3.10 R
1883 2134 0.382158 CCTGCATGCATCAAGCTCAG 59.618 55.0 22.97 5.79 45.94 3.35 R
3254 6199 0.179032 TGCGAACCCATGTTGACACT 60.179 50.0 0.00 0.00 33.97 3.55 R
3521 6466 1.669999 GGCCACAGGGATGTGCATTC 61.670 60.0 0.00 0.00 38.40 2.67 R
3984 6932 0.176449 CTGTGAGGATGATGGTGCGA 59.824 55.0 0.00 0.00 0.00 5.10 R
4714 7704 0.249238 GGATAGCACACTCGCTGGAG 60.249 60.0 0.00 0.00 43.68 3.86 R
5526 8637 0.548031 GCCAGATCCCACCATCTTCA 59.452 55.0 0.00 0.00 30.07 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 6.104094 AGGGCCTAATTTTGATTATCCACCTA 59.896 38.462 2.82 0.00 0.00 3.08
94 95 6.208797 GGGCCTAATTTTGATTATCCACCTAC 59.791 42.308 0.84 0.00 0.00 3.18
95 96 7.004691 GGCCTAATTTTGATTATCCACCTACT 58.995 38.462 0.00 0.00 0.00 2.57
163 164 9.539825 ACTATCACTTAGAATGATGATGTGTTC 57.460 33.333 0.00 0.00 37.38 3.18
342 343 7.713764 TCGAATGGTGATATGATTGTAACAG 57.286 36.000 0.00 0.00 0.00 3.16
343 344 7.272244 TCGAATGGTGATATGATTGTAACAGT 58.728 34.615 0.00 0.00 0.00 3.55
344 345 7.768582 TCGAATGGTGATATGATTGTAACAGTT 59.231 33.333 0.00 0.00 0.00 3.16
345 346 9.040939 CGAATGGTGATATGATTGTAACAGTTA 57.959 33.333 0.00 0.00 0.00 2.24
431 559 8.926710 CGTACTAATGAACAGATATCAAATCCC 58.073 37.037 5.32 0.00 0.00 3.85
433 561 8.915057 ACTAATGAACAGATATCAAATCCCTG 57.085 34.615 5.32 0.00 0.00 4.45
434 562 8.497745 ACTAATGAACAGATATCAAATCCCTGT 58.502 33.333 5.32 0.00 39.49 4.00
436 564 8.915057 AATGAACAGATATCAAATCCCTGTAG 57.085 34.615 5.32 0.00 37.12 2.74
437 565 7.437713 TGAACAGATATCAAATCCCTGTAGT 57.562 36.000 5.32 0.00 37.12 2.73
438 566 7.861629 TGAACAGATATCAAATCCCTGTAGTT 58.138 34.615 5.32 0.00 37.12 2.24
442 570 5.370880 AGATATCAAATCCCTGTAGTTGGCT 59.629 40.000 5.32 0.00 0.00 4.75
446 574 2.938956 ATCCCTGTAGTTGGCTATGC 57.061 50.000 0.00 0.00 0.00 3.14
448 576 1.160329 CCCTGTAGTTGGCTATGCGC 61.160 60.000 0.00 0.00 38.13 6.09
449 577 0.461870 CCTGTAGTTGGCTATGCGCA 60.462 55.000 14.96 14.96 41.67 6.09
450 578 1.586422 CTGTAGTTGGCTATGCGCAT 58.414 50.000 28.23 28.23 41.67 4.73
451 579 1.528586 CTGTAGTTGGCTATGCGCATC 59.471 52.381 29.11 13.81 41.67 3.91
452 580 0.868406 GTAGTTGGCTATGCGCATCC 59.132 55.000 29.11 23.08 41.67 3.51
453 581 0.250295 TAGTTGGCTATGCGCATCCC 60.250 55.000 29.11 26.71 41.67 3.85
454 582 2.203337 TTGGCTATGCGCATCCCC 60.203 61.111 29.11 26.35 41.67 4.81
491 619 2.202295 TTTTTGTTCTCACGGCAAGC 57.798 45.000 0.00 0.00 0.00 4.01
556 772 4.081917 TGCATACACTTCTACAATGGACGA 60.082 41.667 0.00 0.00 0.00 4.20
666 886 5.249622 TCCACAAGGACCACAACTAATATGA 59.750 40.000 0.00 0.00 39.61 2.15
819 1039 3.161067 CACAAGAGGAGAGACCAGAGAA 58.839 50.000 0.00 0.00 42.04 2.87
895 1116 0.524862 CTCTCCACCATTGCACAAGC 59.475 55.000 0.00 0.00 42.57 4.01
944 1169 2.997315 TCCCGTGGAGCTGGACAG 60.997 66.667 0.00 0.00 0.00 3.51
957 1182 0.976641 TGGACAGGTCAAGGCTGTAG 59.023 55.000 1.41 0.00 0.00 2.74
1036 1262 1.743252 GCCTCTTCCACTTCCTGCG 60.743 63.158 0.00 0.00 0.00 5.18
1061 1287 1.001706 CTCTGACCACGACGACAAGAA 60.002 52.381 0.00 0.00 0.00 2.52
1074 1300 2.286418 CGACAAGAACAAGAAGCACCAC 60.286 50.000 0.00 0.00 0.00 4.16
1294 1526 1.474478 TCATCTCGACTCTGTTGCTCC 59.526 52.381 0.00 0.00 0.00 4.70
1574 1818 1.599047 CCAACACATCCTCCTCGCT 59.401 57.895 0.00 0.00 0.00 4.93
1593 1837 0.036732 TCTCTCACCACCATGTTGCC 59.963 55.000 0.00 0.00 0.00 4.52
1594 1838 0.037303 CTCTCACCACCATGTTGCCT 59.963 55.000 0.00 0.00 0.00 4.75
1621 1865 8.177456 TGATCCAGGTACCACTATACTAATCAT 58.823 37.037 15.94 0.00 0.00 2.45
1716 1964 4.422057 TCTGGTTAACTGGACCTGTCATA 58.578 43.478 5.42 0.00 38.04 2.15
1848 2099 5.254339 CATTTATGCTTGGGAGTCCTTTC 57.746 43.478 9.58 0.00 0.00 2.62
1935 2186 7.535139 TGTTGGTTTACTTTTTCTTCAGAGTG 58.465 34.615 0.00 0.00 0.00 3.51
1936 2187 6.131544 TGGTTTACTTTTTCTTCAGAGTGC 57.868 37.500 0.00 0.00 0.00 4.40
1937 2188 5.885912 TGGTTTACTTTTTCTTCAGAGTGCT 59.114 36.000 0.00 0.00 0.00 4.40
1938 2189 7.051623 TGGTTTACTTTTTCTTCAGAGTGCTA 58.948 34.615 0.00 0.00 0.00 3.49
1939 2190 7.226720 TGGTTTACTTTTTCTTCAGAGTGCTAG 59.773 37.037 0.00 0.00 0.00 3.42
1940 2191 7.308049 GGTTTACTTTTTCTTCAGAGTGCTAGG 60.308 40.741 0.00 0.00 0.00 3.02
1949 2200 4.425180 TCAGAGTGCTAGGAGTAGTAGG 57.575 50.000 0.00 0.00 0.00 3.18
2033 2284 3.465871 CCAACCACAATGTTTCCCAAAG 58.534 45.455 0.00 0.00 0.00 2.77
2072 2605 3.942130 ATTAAGGTTCTTGCCAACAGC 57.058 42.857 0.00 0.00 44.14 4.40
2093 2626 1.704641 TGACTAGTGCCAGTGTGTCT 58.295 50.000 0.00 0.00 0.00 3.41
2286 2823 8.137437 ACAAGTTTACTCATGAACAAGGAAATG 58.863 33.333 0.00 0.00 28.49 2.32
2287 2824 7.219484 AGTTTACTCATGAACAAGGAAATGG 57.781 36.000 0.00 0.00 28.49 3.16
2288 2825 7.004086 AGTTTACTCATGAACAAGGAAATGGA 58.996 34.615 0.00 0.00 28.49 3.41
2289 2826 7.175641 AGTTTACTCATGAACAAGGAAATGGAG 59.824 37.037 0.00 0.00 28.49 3.86
2290 2827 4.990526 ACTCATGAACAAGGAAATGGAGT 58.009 39.130 0.00 0.00 0.00 3.85
2291 2828 6.126863 ACTCATGAACAAGGAAATGGAGTA 57.873 37.500 0.00 0.00 0.00 2.59
2294 2831 8.497745 ACTCATGAACAAGGAAATGGAGTATAT 58.502 33.333 0.00 0.00 0.00 0.86
2391 2928 9.956640 TTATTTTCATGCAAGGGAACATATTTT 57.043 25.926 0.00 0.00 0.00 1.82
2450 3083 6.531594 CCCGCAAAGAAAATCCTTTAAGATTC 59.468 38.462 0.00 0.00 35.40 2.52
2482 3115 3.662290 GGTGGAGGTAATGCAACCA 57.338 52.632 10.18 1.82 42.40 3.67
2582 3215 3.113322 TCGAATCACGTTAGCTGTATGC 58.887 45.455 0.00 0.00 43.13 3.14
2605 3238 2.094390 GCAGTTCCACATGCATTGACAT 60.094 45.455 0.00 0.00 42.11 3.06
2661 3336 6.469782 AAAGATTGACCTTTGCTTTGAGAA 57.530 33.333 0.00 0.00 35.26 2.87
2689 3364 0.512518 TTTCTCTTCGTGCATGTGCG 59.487 50.000 5.68 0.00 45.83 5.34
2746 5641 3.128068 TCGTAAGAGAGCTTTCGTGCATA 59.872 43.478 8.66 0.00 45.01 3.14
2747 5642 3.483922 CGTAAGAGAGCTTTCGTGCATAG 59.516 47.826 8.66 0.00 39.24 2.23
2748 5643 3.601443 AAGAGAGCTTTCGTGCATAGT 57.399 42.857 0.00 0.00 34.99 2.12
2765 5660 7.998767 CGTGCATAGTAAAATCTTTCATAGACG 59.001 37.037 0.00 0.00 35.19 4.18
2818 5713 8.625786 ATTTTACAACCGTTAAGATTACACCT 57.374 30.769 0.00 0.00 0.00 4.00
2823 5718 6.870439 ACAACCGTTAAGATTACACCTACTTC 59.130 38.462 0.00 0.00 0.00 3.01
2894 5789 6.068010 TGCCCTTTTCTCTTCATTAGTTTGA 58.932 36.000 0.00 0.00 0.00 2.69
2896 5791 6.207614 GCCCTTTTCTCTTCATTAGTTTGAGT 59.792 38.462 0.00 0.00 0.00 3.41
2914 5809 6.847956 TTGAGTTTTTGGATGAATTTGCTG 57.152 33.333 0.00 0.00 0.00 4.41
2915 5810 6.159299 TGAGTTTTTGGATGAATTTGCTGA 57.841 33.333 0.00 0.00 0.00 4.26
2948 5844 9.866655 ATTTAATATGGTATCAAAGCCAAGAGA 57.133 29.630 0.00 0.00 38.38 3.10
2952 5848 6.705863 ATGGTATCAAAGCCAAGAGATTTC 57.294 37.500 0.00 0.00 38.38 2.17
2956 5852 6.375455 GGTATCAAAGCCAAGAGATTTCTGAA 59.625 38.462 0.00 0.00 32.79 3.02
2957 5853 6.906157 ATCAAAGCCAAGAGATTTCTGAAA 57.094 33.333 5.15 5.15 32.79 2.69
3027 5965 7.554959 AAAGGAGTCTAAATCTGTAGGTGAA 57.445 36.000 0.00 0.00 0.00 3.18
3050 5988 5.126067 AGTGGAGTGTTGACATATATTGCC 58.874 41.667 0.00 0.00 0.00 4.52
3066 6004 0.395724 TGCCTGCCACTCTCTATCGA 60.396 55.000 0.00 0.00 0.00 3.59
3086 6024 9.586150 CTATCGATTCTGATTTTTGGATAAACG 57.414 33.333 1.71 0.00 0.00 3.60
3105 6044 1.879380 CGGTCTGGTGCTTGAATTCAA 59.121 47.619 19.45 19.45 0.00 2.69
3115 6054 7.312154 TGGTGCTTGAATTCAATATTGTACAC 58.688 34.615 20.76 17.18 35.02 2.90
3226 6169 4.889780 AGGACAGAAGTTCCATATCTCCT 58.110 43.478 0.00 0.00 0.00 3.69
3235 6178 4.535294 AGTTCCATATCTCCTGGATCCATG 59.465 45.833 16.63 13.30 42.26 3.66
3236 6179 4.151943 TCCATATCTCCTGGATCCATGT 57.848 45.455 16.63 0.00 37.87 3.21
3259 6204 8.418597 TGTAGGGATCCATATAACTAAGTGTC 57.581 38.462 15.23 0.00 0.00 3.67
3262 6207 7.736893 AGGGATCCATATAACTAAGTGTCAAC 58.263 38.462 15.23 0.00 0.00 3.18
3270 6215 8.612619 CATATAACTAAGTGTCAACATGGGTTC 58.387 37.037 0.00 0.00 34.21 3.62
3292 6237 4.616181 GCATAAGAGTTAAATGCGTGGT 57.384 40.909 0.00 0.00 36.94 4.16
3293 6238 4.588278 GCATAAGAGTTAAATGCGTGGTC 58.412 43.478 0.00 0.00 36.94 4.02
3294 6239 4.495844 GCATAAGAGTTAAATGCGTGGTCC 60.496 45.833 0.00 0.00 36.94 4.46
3521 6466 5.343593 GTGTCAAGAGTTCTAGTTCGATGTG 59.656 44.000 0.00 0.00 0.00 3.21
3547 6492 1.081833 ATCCCTGTGGCCAGAGAGT 59.918 57.895 30.63 13.03 41.50 3.24
3556 6501 1.985159 TGGCCAGAGAGTTGGTATTGT 59.015 47.619 0.00 0.00 40.49 2.71
3633 6579 1.064017 GGTGGACCCTATTGCCATCAA 60.064 52.381 0.00 0.00 33.01 2.57
3695 6642 0.178873 TGGTTAGCTCCTGGTCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
3713 6660 4.722535 TGCCCTCCTCCCGCTTCT 62.723 66.667 0.00 0.00 0.00 2.85
3779 6726 4.532126 CCATACAGTGAATATAGGGCTCCA 59.468 45.833 0.00 0.00 0.00 3.86
3782 6729 2.628178 CAGTGAATATAGGGCTCCACGA 59.372 50.000 0.00 0.00 0.00 4.35
3783 6730 2.628657 AGTGAATATAGGGCTCCACGAC 59.371 50.000 0.00 0.00 0.00 4.34
3784 6731 2.364324 GTGAATATAGGGCTCCACGACA 59.636 50.000 0.00 0.00 0.00 4.35
3785 6732 2.364324 TGAATATAGGGCTCCACGACAC 59.636 50.000 0.00 0.00 0.00 3.67
3786 6733 1.339097 ATATAGGGCTCCACGACACC 58.661 55.000 0.00 0.00 0.00 4.16
3787 6734 0.260816 TATAGGGCTCCACGACACCT 59.739 55.000 0.00 0.00 35.37 4.00
3788 6735 1.043673 ATAGGGCTCCACGACACCTC 61.044 60.000 0.00 0.00 32.87 3.85
3789 6736 4.083862 GGGCTCCACGACACCTCC 62.084 72.222 0.00 0.00 0.00 4.30
3790 6737 3.311110 GGCTCCACGACACCTCCA 61.311 66.667 0.00 0.00 0.00 3.86
3791 6738 2.660064 GGCTCCACGACACCTCCAT 61.660 63.158 0.00 0.00 0.00 3.41
3792 6739 1.327690 GGCTCCACGACACCTCCATA 61.328 60.000 0.00 0.00 0.00 2.74
3793 6740 0.179108 GCTCCACGACACCTCCATAC 60.179 60.000 0.00 0.00 0.00 2.39
3794 6741 1.182667 CTCCACGACACCTCCATACA 58.817 55.000 0.00 0.00 0.00 2.29
3795 6742 1.135139 CTCCACGACACCTCCATACAG 59.865 57.143 0.00 0.00 0.00 2.74
3796 6743 0.895530 CCACGACACCTCCATACAGT 59.104 55.000 0.00 0.00 0.00 3.55
3797 6744 1.404181 CCACGACACCTCCATACAGTG 60.404 57.143 0.00 0.00 37.53 3.66
3798 6745 1.544246 CACGACACCTCCATACAGTGA 59.456 52.381 0.00 0.00 35.47 3.41
3799 6746 2.029380 CACGACACCTCCATACAGTGAA 60.029 50.000 0.00 0.00 35.47 3.18
3800 6747 2.832129 ACGACACCTCCATACAGTGAAT 59.168 45.455 0.00 0.00 35.47 2.57
3801 6748 4.021229 ACGACACCTCCATACAGTGAATA 58.979 43.478 0.00 0.00 35.47 1.75
3802 6749 4.649674 ACGACACCTCCATACAGTGAATAT 59.350 41.667 0.00 0.00 35.47 1.28
3803 6750 5.831525 ACGACACCTCCATACAGTGAATATA 59.168 40.000 0.00 0.00 35.47 0.86
3804 6751 6.016192 ACGACACCTCCATACAGTGAATATAG 60.016 42.308 0.00 0.00 35.47 1.31
3805 6752 6.570571 CGACACCTCCATACAGTGAATATAGG 60.571 46.154 0.00 0.53 35.47 2.57
3806 6753 5.544176 ACACCTCCATACAGTGAATATAGGG 59.456 44.000 0.00 0.00 35.47 3.53
3807 6754 4.532521 ACCTCCATACAGTGAATATAGGGC 59.467 45.833 0.00 0.00 0.00 5.19
3808 6755 4.780021 CCTCCATACAGTGAATATAGGGCT 59.220 45.833 0.00 0.00 0.00 5.19
3809 6756 5.105146 CCTCCATACAGTGAATATAGGGCTC 60.105 48.000 0.00 0.00 0.00 4.70
3810 6757 4.777896 TCCATACAGTGAATATAGGGCTCC 59.222 45.833 0.00 0.00 0.00 4.70
3811 6758 4.532126 CCATACAGTGAATATAGGGCTCCA 59.468 45.833 0.00 0.00 0.00 3.86
3812 6759 5.482908 CATACAGTGAATATAGGGCTCCAC 58.517 45.833 0.00 0.00 0.00 4.02
3813 6760 2.365617 ACAGTGAATATAGGGCTCCACG 59.634 50.000 0.00 0.00 0.00 4.94
3814 6761 2.628178 CAGTGAATATAGGGCTCCACGA 59.372 50.000 0.00 0.00 0.00 4.35
3824 6771 3.007973 GCTCCACGACACCTCCTCC 62.008 68.421 0.00 0.00 0.00 4.30
3833 6780 1.908793 CACCTCCTCCAGACACGGT 60.909 63.158 0.00 0.00 0.00 4.83
3846 6793 2.029290 AGACACGGTACAACCTTAGCTG 60.029 50.000 0.00 0.00 35.66 4.24
3854 6801 1.985895 ACAACCTTAGCTGGCTAACCT 59.014 47.619 10.53 0.00 35.06 3.50
3879 6826 1.670949 CGCTAAGCTCTCCTCTGCCA 61.671 60.000 0.00 0.00 0.00 4.92
3886 6833 1.193323 CTCTCCTCTGCCACTCACAT 58.807 55.000 0.00 0.00 0.00 3.21
3941 6889 1.029408 TGTCGTGCAAGCAACCAAGT 61.029 50.000 0.00 0.00 0.00 3.16
3948 6896 2.223782 TGCAAGCAACCAAGTCATGTTC 60.224 45.455 0.00 0.00 0.00 3.18
3951 6899 3.120321 AGCAACCAAGTCATGTTCGTA 57.880 42.857 0.00 0.00 0.00 3.43
3968 6916 3.154710 TCGTAGTCTCAACCTGACACAT 58.845 45.455 0.00 0.00 36.94 3.21
3974 6922 4.588951 AGTCTCAACCTGACACATGAACTA 59.411 41.667 0.00 0.00 36.94 2.24
3976 6924 3.664107 TCAACCTGACACATGAACTAGC 58.336 45.455 0.00 0.00 0.00 3.42
3991 6939 0.108662 CTAGCAGATGTGTCGCACCA 60.109 55.000 7.38 0.00 32.73 4.17
4002 6950 0.108186 GTCGCACCATCATCCTCACA 60.108 55.000 0.00 0.00 0.00 3.58
4048 6996 3.304726 GGACTATGATCATCGCGTCTTGA 60.305 47.826 12.53 8.81 0.00 3.02
4049 6997 3.633235 ACTATGATCATCGCGTCTTGAC 58.367 45.455 12.53 4.48 0.00 3.18
4052 7000 1.209275 GATCATCGCGTCTTGACGGG 61.209 60.000 26.68 26.68 45.50 5.28
4057 7005 4.070552 GCGTCTTGACGGGCCTCT 62.071 66.667 22.04 0.00 0.00 3.69
4059 7007 1.888018 CGTCTTGACGGGCCTCTAA 59.112 57.895 14.53 0.00 0.00 2.10
4062 7010 0.178068 TCTTGACGGGCCTCTAATGC 59.822 55.000 0.84 0.00 0.00 3.56
4068 7016 3.148084 GGCCTCTAATGCCGCCTA 58.852 61.111 0.00 0.00 39.48 3.93
4073 7045 1.827969 CCTCTAATGCCGCCTATAGCT 59.172 52.381 0.00 0.00 40.39 3.32
4085 7057 2.610727 GCCTATAGCTTCCGATTCGCTT 60.611 50.000 0.00 0.00 38.99 4.68
4163 7148 1.651987 CACATCCCGCATTTACGACT 58.348 50.000 0.00 0.00 34.06 4.18
4170 7155 1.800681 GCATTTACGACTGGTGGGC 59.199 57.895 0.00 0.00 0.00 5.36
4174 7159 0.544833 TTTACGACTGGTGGGCCCTA 60.545 55.000 25.70 6.58 0.00 3.53
4227 7212 1.271926 GGCCAGTCAATGTGGGTTAGT 60.272 52.381 0.00 0.00 35.39 2.24
4234 7219 3.886505 GTCAATGTGGGTTAGTGGTCAAA 59.113 43.478 0.00 0.00 0.00 2.69
4243 7228 1.742308 TAGTGGTCAAAAGGGCCTCT 58.258 50.000 6.46 0.00 0.00 3.69
4244 7229 0.853530 AGTGGTCAAAAGGGCCTCTT 59.146 50.000 6.46 0.00 37.28 2.85
4317 7303 4.952957 TGGGACTGACTTGACATTTTGAAA 59.047 37.500 0.00 0.00 0.00 2.69
4367 7355 4.551671 ACTCTGCATAACTAGATGTCCCT 58.448 43.478 0.00 0.00 0.00 4.20
4386 7374 2.023673 CTTGGTTTGTGCCTGTCTTGA 58.976 47.619 0.00 0.00 0.00 3.02
4415 7403 1.786441 TCCCTGTCCATTTGAACCCTT 59.214 47.619 0.00 0.00 0.00 3.95
4442 7430 9.964253 GTTCATCAATATTGTAAGCAGATATCG 57.036 33.333 14.97 0.00 0.00 2.92
4451 7439 8.749841 ATTGTAAGCAGATATCGATAAGTGAC 57.250 34.615 9.61 5.29 0.00 3.67
4452 7440 7.511959 TGTAAGCAGATATCGATAAGTGACT 57.488 36.000 9.61 8.37 0.00 3.41
4453 7441 8.617290 TGTAAGCAGATATCGATAAGTGACTA 57.383 34.615 9.61 2.87 0.00 2.59
4454 7442 8.504815 TGTAAGCAGATATCGATAAGTGACTAC 58.495 37.037 9.61 13.08 0.00 2.73
4455 7443 7.511959 AAGCAGATATCGATAAGTGACTACA 57.488 36.000 9.61 0.00 0.00 2.74
4456 7444 7.695480 AGCAGATATCGATAAGTGACTACAT 57.305 36.000 9.61 0.00 0.00 2.29
4457 7445 8.794335 AGCAGATATCGATAAGTGACTACATA 57.206 34.615 9.61 0.00 0.00 2.29
4458 7446 8.670135 AGCAGATATCGATAAGTGACTACATAC 58.330 37.037 9.61 0.00 0.00 2.39
4459 7447 7.636745 GCAGATATCGATAAGTGACTACATACG 59.363 40.741 9.61 0.00 0.00 3.06
4460 7448 8.117370 CAGATATCGATAAGTGACTACATACGG 58.883 40.741 9.61 0.00 0.00 4.02
4461 7449 8.039538 AGATATCGATAAGTGACTACATACGGA 58.960 37.037 9.61 0.00 0.00 4.69
4462 7450 5.919272 TCGATAAGTGACTACATACGGAG 57.081 43.478 0.00 0.00 0.00 4.63
4463 7451 4.212847 TCGATAAGTGACTACATACGGAGC 59.787 45.833 0.00 0.00 0.00 4.70
4464 7452 4.024302 CGATAAGTGACTACATACGGAGCA 60.024 45.833 0.00 0.00 0.00 4.26
4465 7453 5.505159 CGATAAGTGACTACATACGGAGCAA 60.505 44.000 0.00 0.00 0.00 3.91
4466 7454 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
4467 7455 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4468 7456 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4469 7457 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
4470 7458 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
4471 7459 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
4472 7460 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4473 7461 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4474 7462 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4475 7463 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4476 7464 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4477 7465 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4478 7466 2.749621 ACGGAGCAAAATGAGTGAATCC 59.250 45.455 0.00 0.00 0.00 3.01
4479 7467 2.749076 CGGAGCAAAATGAGTGAATCCA 59.251 45.455 0.00 0.00 0.00 3.41
4480 7468 3.426695 CGGAGCAAAATGAGTGAATCCAC 60.427 47.826 0.00 0.00 43.50 4.02
4481 7469 3.507233 GGAGCAAAATGAGTGAATCCACA 59.493 43.478 0.00 0.00 45.54 4.17
4482 7470 4.479619 GAGCAAAATGAGTGAATCCACAC 58.520 43.478 0.00 0.00 45.54 3.82
4495 7483 8.723942 AGTGAATCCACACTCTAAAATATGTC 57.276 34.615 0.00 0.00 46.36 3.06
4496 7484 8.543774 AGTGAATCCACACTCTAAAATATGTCT 58.456 33.333 0.00 0.00 46.36 3.41
4497 7485 9.817809 GTGAATCCACACTCTAAAATATGTCTA 57.182 33.333 0.00 0.00 42.72 2.59
4513 7501 9.678941 AAATATGTCTATATACATCCGTATGCG 57.321 33.333 7.00 0.00 40.52 4.73
4526 7514 2.816689 CGTATGCGGTAGTCCATTTGA 58.183 47.619 0.00 0.00 0.00 2.69
4527 7515 3.191669 CGTATGCGGTAGTCCATTTGAA 58.808 45.455 0.00 0.00 0.00 2.69
4528 7516 3.245284 CGTATGCGGTAGTCCATTTGAAG 59.755 47.826 0.00 0.00 0.00 3.02
4529 7517 2.851263 TGCGGTAGTCCATTTGAAGT 57.149 45.000 0.00 0.00 0.00 3.01
4530 7518 2.695359 TGCGGTAGTCCATTTGAAGTC 58.305 47.619 0.00 0.00 0.00 3.01
4531 7519 2.301870 TGCGGTAGTCCATTTGAAGTCT 59.698 45.455 0.00 0.00 0.00 3.24
4532 7520 2.930682 GCGGTAGTCCATTTGAAGTCTC 59.069 50.000 0.00 0.00 0.00 3.36
4533 7521 3.368531 GCGGTAGTCCATTTGAAGTCTCT 60.369 47.826 0.00 0.00 0.00 3.10
4534 7522 4.142227 GCGGTAGTCCATTTGAAGTCTCTA 60.142 45.833 0.00 0.00 0.00 2.43
4535 7523 5.623824 GCGGTAGTCCATTTGAAGTCTCTAA 60.624 44.000 0.00 0.00 0.00 2.10
4536 7524 6.395629 CGGTAGTCCATTTGAAGTCTCTAAA 58.604 40.000 0.00 0.00 0.00 1.85
4537 7525 6.872020 CGGTAGTCCATTTGAAGTCTCTAAAA 59.128 38.462 0.00 0.00 0.00 1.52
4538 7526 7.386848 CGGTAGTCCATTTGAAGTCTCTAAAAA 59.613 37.037 0.00 0.00 0.00 1.94
4539 7527 8.722394 GGTAGTCCATTTGAAGTCTCTAAAAAG 58.278 37.037 0.00 0.00 0.00 2.27
4540 7528 9.490379 GTAGTCCATTTGAAGTCTCTAAAAAGA 57.510 33.333 0.00 0.00 0.00 2.52
4541 7529 8.384607 AGTCCATTTGAAGTCTCTAAAAAGAC 57.615 34.615 0.00 0.00 44.96 3.01
4542 7530 7.993183 AGTCCATTTGAAGTCTCTAAAAAGACA 59.007 33.333 6.79 0.00 46.65 3.41
4543 7531 8.621286 GTCCATTTGAAGTCTCTAAAAAGACAA 58.379 33.333 6.79 0.00 46.65 3.18
4544 7532 9.184523 TCCATTTGAAGTCTCTAAAAAGACAAA 57.815 29.630 6.79 0.00 46.65 2.83
4545 7533 9.971922 CCATTTGAAGTCTCTAAAAAGACAAAT 57.028 29.630 6.79 0.00 46.65 2.32
4560 7548 9.908152 AAAAAGACAAATATTTAGAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
4561 7549 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
4702 7692 2.732412 TTCGAGAGCACCAAAGAGAG 57.268 50.000 0.00 0.00 0.00 3.20
4714 7704 6.147328 AGCACCAAAGAGAGTTCGTAATTAAC 59.853 38.462 0.00 0.00 0.00 2.01
4732 7722 3.264666 CTCCAGCGAGTGTGCTATC 57.735 57.895 0.00 0.00 45.23 2.08
4733 7723 0.249238 CTCCAGCGAGTGTGCTATCC 60.249 60.000 0.00 0.00 45.23 2.59
4766 7868 8.565416 ACAAATTAAGCTTCAGTTTGTACTACC 58.435 33.333 23.84 0.00 40.16 3.18
4783 7885 4.892198 ACTACCTCTTCCCCTGCTAAATA 58.108 43.478 0.00 0.00 0.00 1.40
4787 7889 2.434702 CTCTTCCCCTGCTAAATACCGT 59.565 50.000 0.00 0.00 0.00 4.83
4975 8086 2.442272 ACGCTCCGGCTGGACTAT 60.442 61.111 11.27 0.00 40.17 2.12
5041 8152 2.559381 ACTACTCCTTCCTCTGCCAT 57.441 50.000 0.00 0.00 0.00 4.40
5371 8482 0.253044 GCCACCAGCTGTTCCATCTA 59.747 55.000 13.81 0.00 38.99 1.98
5503 8614 4.746361 CAGCTACATCTCCGGCTG 57.254 61.111 0.00 0.00 44.45 4.85
5504 8615 4.686695 AGCTACATCTCCGGCTGA 57.313 55.556 0.00 0.00 33.50 4.26
5505 8616 2.901975 AGCTACATCTCCGGCTGAA 58.098 52.632 0.00 0.00 33.50 3.02
5506 8617 0.749649 AGCTACATCTCCGGCTGAAG 59.250 55.000 0.00 0.00 33.50 3.02
5507 8618 0.249657 GCTACATCTCCGGCTGAAGG 60.250 60.000 0.00 0.00 0.00 3.46
5508 8619 1.115467 CTACATCTCCGGCTGAAGGT 58.885 55.000 0.00 3.63 0.00 3.50
5509 8620 0.824109 TACATCTCCGGCTGAAGGTG 59.176 55.000 0.00 0.00 0.00 4.00
5510 8621 1.817099 CATCTCCGGCTGAAGGTGC 60.817 63.158 0.00 0.00 0.00 5.01
5511 8622 1.992277 ATCTCCGGCTGAAGGTGCT 60.992 57.895 0.00 0.00 0.00 4.40
5512 8623 1.557269 ATCTCCGGCTGAAGGTGCTT 61.557 55.000 0.00 0.00 0.00 3.91
5513 8624 1.743252 CTCCGGCTGAAGGTGCTTC 60.743 63.158 0.00 0.00 40.54 3.86
5514 8625 2.747855 CCGGCTGAAGGTGCTTCC 60.748 66.667 0.00 0.00 39.51 3.46
5515 8626 2.032528 CGGCTGAAGGTGCTTCCA 59.967 61.111 0.00 0.00 39.51 3.53
5516 8627 1.377725 CGGCTGAAGGTGCTTCCAT 60.378 57.895 0.00 0.00 39.51 3.41
5517 8628 0.962356 CGGCTGAAGGTGCTTCCATT 60.962 55.000 0.00 0.00 39.51 3.16
5518 8629 1.678728 CGGCTGAAGGTGCTTCCATTA 60.679 52.381 0.00 0.00 39.51 1.90
5519 8630 2.446435 GGCTGAAGGTGCTTCCATTAA 58.554 47.619 0.00 0.00 39.51 1.40
5520 8631 3.026694 GGCTGAAGGTGCTTCCATTAAT 58.973 45.455 0.00 0.00 39.51 1.40
5521 8632 3.067320 GGCTGAAGGTGCTTCCATTAATC 59.933 47.826 0.00 0.00 39.51 1.75
5522 8633 3.067320 GCTGAAGGTGCTTCCATTAATCC 59.933 47.826 0.00 0.00 39.51 3.01
5523 8634 4.272489 CTGAAGGTGCTTCCATTAATCCA 58.728 43.478 0.00 0.00 39.51 3.41
5524 8635 4.671831 TGAAGGTGCTTCCATTAATCCAA 58.328 39.130 0.00 0.00 39.51 3.53
5525 8636 4.462483 TGAAGGTGCTTCCATTAATCCAAC 59.538 41.667 0.00 0.00 39.51 3.77
5526 8637 4.322057 AGGTGCTTCCATTAATCCAACT 57.678 40.909 1.79 0.00 39.02 3.16
5593 8731 8.596781 AGTGAAAGAGTACTGAGGTATACATT 57.403 34.615 0.00 0.00 0.00 2.71
5640 8778 1.742831 TGGATGTGAGGCGTAATTTGC 59.257 47.619 0.00 0.00 0.00 3.68
5708 8846 8.106462 TCTTGTGTATAATTGATTGGAACCTCA 58.894 33.333 0.00 0.00 0.00 3.86
5831 8969 3.088532 AGGATCTCACTCATATCGCTCC 58.911 50.000 0.00 0.00 0.00 4.70
5843 8981 4.507756 TCATATCGCTCCGTTTGATGAAAG 59.492 41.667 0.00 0.00 0.00 2.62
5851 8989 2.350772 CCGTTTGATGAAAGTGTCAGGC 60.351 50.000 0.00 0.00 40.43 4.85
5856 8994 3.141398 TGATGAAAGTGTCAGGCTGTTC 58.859 45.455 15.27 10.83 40.43 3.18
5890 9028 2.811431 TGCATCAACTTCGTCGGATTTT 59.189 40.909 0.00 0.00 0.00 1.82
5928 9066 1.421382 TTTTAGAACGAAGACGCCGG 58.579 50.000 0.00 0.00 43.96 6.13
5931 9072 0.957395 TAGAACGAAGACGCCGGAGT 60.957 55.000 11.88 11.88 43.96 3.85
5937 9078 2.156051 GAAGACGCCGGAGTTGTCCT 62.156 60.000 13.57 1.24 41.34 3.85
5982 9123 4.085733 AGCTCACAGACAGACAGAGTAAT 58.914 43.478 0.00 0.00 0.00 1.89
5984 9125 5.890985 AGCTCACAGACAGACAGAGTAATAT 59.109 40.000 0.00 0.00 0.00 1.28
6001 9142 8.594550 AGAGTAATATAGGTTCACACAACAACT 58.405 33.333 0.00 0.00 0.00 3.16
6009 9150 7.080353 AGGTTCACACAACAACTAAACTAAC 57.920 36.000 0.00 0.00 0.00 2.34
6017 9158 9.439500 ACACAACAACTAAACTAACTTAAGTCA 57.561 29.630 8.95 0.00 0.00 3.41
6025 9166 9.310716 ACTAAACTAACTTAAGTCAACACTCAC 57.689 33.333 8.95 0.00 29.93 3.51
6028 9169 5.753921 ACTAACTTAAGTCAACACTCACAGC 59.246 40.000 8.95 0.00 29.93 4.40
6029 9170 4.408182 ACTTAAGTCAACACTCACAGCT 57.592 40.909 1.12 0.00 29.93 4.24
6030 9171 4.770795 ACTTAAGTCAACACTCACAGCTT 58.229 39.130 1.12 0.00 29.93 3.74
6035 9177 1.893808 AACACTCACAGCTTGCCCG 60.894 57.895 0.00 0.00 0.00 6.13
6055 9197 4.457496 CACGCAGGCTCACCGGAT 62.457 66.667 9.46 0.00 42.76 4.18
6074 9216 6.126854 ACCGGATAGCAAAATAAACTACTCCT 60.127 38.462 9.46 0.00 0.00 3.69
6078 9220 8.831550 GGATAGCAAAATAAACTACTCCTTCAG 58.168 37.037 0.00 0.00 0.00 3.02
6111 10928 9.959749 AATATAAAACGTTTTTGTCACTGTCAT 57.040 25.926 29.42 15.52 0.00 3.06
6157 10974 5.541953 AAGTTACGGATGGAGTATTACCC 57.458 43.478 0.00 0.00 0.00 3.69
6158 10975 4.812653 AGTTACGGATGGAGTATTACCCT 58.187 43.478 0.00 0.00 0.00 4.34
6159 10976 5.957132 AGTTACGGATGGAGTATTACCCTA 58.043 41.667 0.00 0.00 0.00 3.53
6160 10977 6.376248 AGTTACGGATGGAGTATTACCCTAA 58.624 40.000 0.00 0.00 0.00 2.69
6161 10978 6.492772 AGTTACGGATGGAGTATTACCCTAAG 59.507 42.308 0.00 0.00 0.00 2.18
6162 10979 4.812653 ACGGATGGAGTATTACCCTAAGT 58.187 43.478 0.00 0.00 0.00 2.24
6163 10980 5.957132 ACGGATGGAGTATTACCCTAAGTA 58.043 41.667 0.00 0.00 0.00 2.24
6164 10981 6.008960 ACGGATGGAGTATTACCCTAAGTAG 58.991 44.000 0.00 0.00 30.92 2.57
6165 10982 5.105837 CGGATGGAGTATTACCCTAAGTAGC 60.106 48.000 0.00 0.00 30.92 3.58
6166 10983 5.778750 GGATGGAGTATTACCCTAAGTAGCA 59.221 44.000 0.00 0.00 30.92 3.49
6167 10984 6.440965 GGATGGAGTATTACCCTAAGTAGCAT 59.559 42.308 0.00 0.00 30.92 3.79
6168 10985 6.912951 TGGAGTATTACCCTAAGTAGCATC 57.087 41.667 0.00 0.00 30.92 3.91
6169 10986 5.778750 TGGAGTATTACCCTAAGTAGCATCC 59.221 44.000 0.00 0.00 30.92 3.51
6170 10987 5.778750 GGAGTATTACCCTAAGTAGCATCCA 59.221 44.000 0.00 0.00 30.92 3.41
6171 10988 6.295180 GGAGTATTACCCTAAGTAGCATCCAC 60.295 46.154 0.00 0.00 30.92 4.02
6172 10989 6.141083 AGTATTACCCTAAGTAGCATCCACA 58.859 40.000 0.00 0.00 30.92 4.17
6173 10990 5.552870 ATTACCCTAAGTAGCATCCACAG 57.447 43.478 0.00 0.00 30.92 3.66
6174 10991 2.119495 ACCCTAAGTAGCATCCACAGG 58.881 52.381 0.00 0.00 0.00 4.00
6175 10992 2.292918 ACCCTAAGTAGCATCCACAGGA 60.293 50.000 0.00 0.00 35.55 3.86
6176 10993 2.366916 CCCTAAGTAGCATCCACAGGAG 59.633 54.545 0.00 0.00 34.05 3.69
6177 10994 2.224161 CCTAAGTAGCATCCACAGGAGC 60.224 54.545 0.00 0.00 34.05 4.70
6178 10995 1.577736 AAGTAGCATCCACAGGAGCT 58.422 50.000 12.37 12.37 38.78 4.09
6186 11003 1.214062 CCACAGGAGCTCTCGTGAC 59.786 63.158 27.20 7.34 45.37 3.67
6189 11006 2.673341 AGGAGCTCTCGTGACGCA 60.673 61.111 14.64 0.00 0.00 5.24
6193 11010 1.469251 GGAGCTCTCGTGACGCAATTA 60.469 52.381 14.64 0.00 0.00 1.40
6197 11014 2.348666 GCTCTCGTGACGCAATTAATGT 59.651 45.455 0.00 0.00 0.00 2.71
6211 11028 6.085458 CGCAATTAATGTGTCGATATCTTTGC 59.915 38.462 0.34 0.00 34.75 3.68
6215 11032 5.878332 AATGTGTCGATATCTTTGCAACA 57.122 34.783 0.00 0.00 0.00 3.33
6217 11034 3.435327 TGTGTCGATATCTTTGCAACACC 59.565 43.478 0.00 0.00 35.77 4.16
6224 11041 2.136298 TCTTTGCAACACCAGTTCCA 57.864 45.000 0.00 0.00 35.28 3.53
6225 11042 2.451490 TCTTTGCAACACCAGTTCCAA 58.549 42.857 0.00 0.00 33.73 3.53
6228 11045 1.846007 TGCAACACCAGTTCCAAGTT 58.154 45.000 0.00 0.00 35.28 2.66
6237 11054 3.508402 ACCAGTTCCAAGTTTTCAACGTT 59.492 39.130 0.00 0.00 36.23 3.99
6239 11056 4.102649 CAGTTCCAAGTTTTCAACGTTCC 58.897 43.478 0.00 0.00 36.23 3.62
6240 11057 3.759618 AGTTCCAAGTTTTCAACGTTCCA 59.240 39.130 0.00 0.00 36.23 3.53
6241 11058 4.102649 GTTCCAAGTTTTCAACGTTCCAG 58.897 43.478 0.00 0.00 36.23 3.86
6242 11059 3.349022 TCCAAGTTTTCAACGTTCCAGT 58.651 40.909 0.00 0.00 36.23 4.00
6243 11060 3.759618 TCCAAGTTTTCAACGTTCCAGTT 59.240 39.130 0.00 0.00 36.23 3.16
6245 11062 3.668596 AGTTTTCAACGTTCCAGTTCG 57.331 42.857 0.00 0.00 36.23 3.95
6246 11063 2.353579 AGTTTTCAACGTTCCAGTTCGG 59.646 45.455 0.00 0.00 36.23 4.30
6248 11065 0.462225 TTCAACGTTCCAGTTCGGCA 60.462 50.000 0.00 0.00 30.96 5.69
6249 11066 0.250124 TCAACGTTCCAGTTCGGCAT 60.250 50.000 0.00 0.00 30.96 4.40
6250 11067 0.110238 CAACGTTCCAGTTCGGCATG 60.110 55.000 0.00 0.00 30.96 4.06
6251 11068 1.234615 AACGTTCCAGTTCGGCATGG 61.235 55.000 0.00 0.00 37.97 3.66
6260 11085 3.359515 TTCGGCATGGCATTGCTGC 62.360 57.895 20.37 12.98 46.46 5.25
6282 11107 7.367159 TGCAGAAAAATTATGCATTTGAAGG 57.633 32.000 3.54 0.00 44.56 3.46
6292 11117 7.701539 TTATGCATTTGAAGGTACAATCAGT 57.298 32.000 3.54 0.00 0.00 3.41
6293 11118 5.627499 TGCATTTGAAGGTACAATCAGTC 57.373 39.130 0.00 0.00 0.00 3.51
6340 11165 8.966069 TCGATGGTTGTTTTATTGTGGATATA 57.034 30.769 0.00 0.00 0.00 0.86
6370 11195 1.479389 CCAAAGAAGAGCCCCAACACT 60.479 52.381 0.00 0.00 0.00 3.55
6373 11198 1.062488 AGAAGAGCCCCAACACTGGT 61.062 55.000 0.00 0.00 41.72 4.00
6377 11202 2.597510 GCCCCAACACTGGTCCAC 60.598 66.667 0.00 0.00 41.72 4.02
6391 11216 6.156949 ACACTGGTCCACATAATTCTCATAGT 59.843 38.462 0.00 0.00 0.00 2.12
6392 11217 6.481313 CACTGGTCCACATAATTCTCATAGTG 59.519 42.308 0.00 0.00 0.00 2.74
6395 11220 6.326323 TGGTCCACATAATTCTCATAGTGCTA 59.674 38.462 0.00 0.00 0.00 3.49
6401 11226 8.535335 CACATAATTCTCATAGTGCTACCCTAT 58.465 37.037 0.00 0.00 0.00 2.57
6432 11257 1.342819 GGCAAGCTAGGAGATCGACAT 59.657 52.381 0.00 0.00 0.00 3.06
6434 11259 3.366883 GGCAAGCTAGGAGATCGACATAG 60.367 52.174 9.20 9.20 0.00 2.23
6435 11260 3.504134 GCAAGCTAGGAGATCGACATAGA 59.496 47.826 15.04 0.00 0.00 1.98
6436 11261 4.614993 GCAAGCTAGGAGATCGACATAGAC 60.615 50.000 15.04 8.69 0.00 2.59
6437 11262 4.634012 AGCTAGGAGATCGACATAGACT 57.366 45.455 15.04 10.17 0.00 3.24
6438 11263 5.748670 AGCTAGGAGATCGACATAGACTA 57.251 43.478 15.04 0.00 0.00 2.59
6439 11264 5.484715 AGCTAGGAGATCGACATAGACTAC 58.515 45.833 15.04 0.00 0.00 2.73
6440 11265 5.247564 AGCTAGGAGATCGACATAGACTACT 59.752 44.000 15.04 0.00 0.00 2.57
6441 11266 5.935789 GCTAGGAGATCGACATAGACTACTT 59.064 44.000 15.04 0.00 0.00 2.24
6442 11267 6.128391 GCTAGGAGATCGACATAGACTACTTG 60.128 46.154 15.04 0.00 0.00 3.16
6443 11268 5.686753 AGGAGATCGACATAGACTACTTGT 58.313 41.667 0.00 0.00 0.00 3.16
6444 11269 6.123651 AGGAGATCGACATAGACTACTTGTT 58.876 40.000 0.00 0.00 0.00 2.83
6445 11270 6.038825 AGGAGATCGACATAGACTACTTGTTG 59.961 42.308 0.00 0.00 0.00 3.33
6446 11271 6.137794 AGATCGACATAGACTACTTGTTGG 57.862 41.667 0.00 0.00 0.00 3.77
6447 11272 5.886474 AGATCGACATAGACTACTTGTTGGA 59.114 40.000 0.00 0.80 0.00 3.53
6448 11273 5.970317 TCGACATAGACTACTTGTTGGAA 57.030 39.130 4.37 0.00 0.00 3.53
6449 11274 5.706916 TCGACATAGACTACTTGTTGGAAC 58.293 41.667 4.37 0.00 0.00 3.62
6450 11275 4.863131 CGACATAGACTACTTGTTGGAACC 59.137 45.833 0.00 0.00 0.00 3.62
6451 11276 5.336531 CGACATAGACTACTTGTTGGAACCT 60.337 44.000 0.00 0.00 0.00 3.50
6452 11277 6.435292 ACATAGACTACTTGTTGGAACCTT 57.565 37.500 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 7.607991 CACTGAAAATTAGACAATGACCCTAGT 59.392 37.037 0.00 0.00 0.00 2.57
94 95 7.607991 ACACTGAAAATTAGACAATGACCCTAG 59.392 37.037 0.00 0.00 0.00 3.02
95 96 7.390440 CACACTGAAAATTAGACAATGACCCTA 59.610 37.037 0.00 0.00 0.00 3.53
148 149 7.801547 AAAAACATCGAACACATCATCATTC 57.198 32.000 0.00 0.00 0.00 2.67
342 343 9.331282 ACTCAGAGGCAACATAAAGAATATAAC 57.669 33.333 1.53 0.00 41.41 1.89
343 344 9.330063 CACTCAGAGGCAACATAAAGAATATAA 57.670 33.333 1.53 0.00 41.41 0.98
344 345 7.442364 GCACTCAGAGGCAACATAAAGAATATA 59.558 37.037 1.53 0.00 41.41 0.86
345 346 6.261826 GCACTCAGAGGCAACATAAAGAATAT 59.738 38.462 1.53 0.00 41.41 1.28
346 347 5.586243 GCACTCAGAGGCAACATAAAGAATA 59.414 40.000 1.53 0.00 41.41 1.75
473 601 0.383949 GGCTTGCCGTGAGAACAAAA 59.616 50.000 0.00 0.00 0.00 2.44
474 602 0.749818 TGGCTTGCCGTGAGAACAAA 60.750 50.000 7.18 0.00 0.00 2.83
475 603 0.749818 TTGGCTTGCCGTGAGAACAA 60.750 50.000 7.18 0.00 0.00 2.83
476 604 0.537143 ATTGGCTTGCCGTGAGAACA 60.537 50.000 7.18 0.00 0.00 3.18
477 605 0.109597 CATTGGCTTGCCGTGAGAAC 60.110 55.000 7.18 0.00 0.00 3.01
478 606 0.250684 TCATTGGCTTGCCGTGAGAA 60.251 50.000 13.16 0.66 0.00 2.87
484 612 1.632422 GTTCATTCATTGGCTTGCCG 58.368 50.000 7.18 0.00 0.00 5.69
491 619 1.067516 GCCGATGGGTTCATTCATTGG 59.932 52.381 0.00 0.00 44.13 3.16
573 789 3.180584 CGAACGGCTCAAGAGATTATTCG 59.819 47.826 0.32 6.55 0.00 3.34
582 798 1.805539 CATCGCGAACGGCTCAAGA 60.806 57.895 15.24 0.00 40.44 3.02
666 886 2.223829 CGAAGATTCCTATGGCTCGTGT 60.224 50.000 0.00 0.00 0.00 4.49
819 1039 7.343316 GGACAACTCTGCCTCTATATATGGTAT 59.657 40.741 0.00 0.00 0.00 2.73
895 1116 1.712401 CCAAATGCCGATGTTGGTTG 58.288 50.000 0.00 0.00 37.59 3.77
944 1169 3.010420 CCTTTTAGCTACAGCCTTGACC 58.990 50.000 0.00 0.00 43.38 4.02
951 1176 3.440522 CAGGAAACCCTTTTAGCTACAGC 59.559 47.826 0.00 0.00 42.49 4.40
957 1182 3.244078 CCAAACCAGGAAACCCTTTTAGC 60.244 47.826 0.00 0.00 0.00 3.09
1036 1262 1.444553 CGTCGTGGTCAGAGCCTTC 60.445 63.158 0.00 0.00 0.00 3.46
1074 1300 1.659954 GTAGCCGATCAGCTCGCAG 60.660 63.158 6.73 0.00 46.25 5.18
1294 1526 2.801996 CAAATGCCTGCGCGTGTG 60.802 61.111 8.43 0.00 38.08 3.82
1380 1624 2.322081 AAATGTGTTCCCGTCGCCG 61.322 57.895 0.00 0.00 0.00 6.46
1381 1625 1.209127 CAAATGTGTTCCCGTCGCC 59.791 57.895 0.00 0.00 0.00 5.54
1382 1626 0.110373 GTCAAATGTGTTCCCGTCGC 60.110 55.000 0.00 0.00 0.00 5.19
1383 1627 0.162933 CGTCAAATGTGTTCCCGTCG 59.837 55.000 0.00 0.00 0.00 5.12
1384 1628 1.193874 GTCGTCAAATGTGTTCCCGTC 59.806 52.381 0.00 0.00 0.00 4.79
1385 1629 1.223187 GTCGTCAAATGTGTTCCCGT 58.777 50.000 0.00 0.00 0.00 5.28
1519 1763 2.371510 GGATCTCCTCCTCATTTCCAGG 59.628 54.545 0.00 0.00 41.29 4.45
1527 1771 0.335019 TGTTCGGGATCTCCTCCTCA 59.665 55.000 0.00 0.00 44.28 3.86
1574 1818 0.036732 GGCAACATGGTGGTGAGAGA 59.963 55.000 13.78 0.00 37.20 3.10
1593 1837 7.834881 TTAGTATAGTGGTACCTGGATCAAG 57.165 40.000 14.36 0.00 0.00 3.02
1594 1838 8.008332 TGATTAGTATAGTGGTACCTGGATCAA 58.992 37.037 14.36 0.00 0.00 2.57
1621 1865 5.714047 CAGAGTTAGTAGTGCAATCAGTGA 58.286 41.667 0.00 0.00 0.00 3.41
1630 1874 6.969828 ATAAACAAGCAGAGTTAGTAGTGC 57.030 37.500 0.00 0.00 36.10 4.40
1638 1882 7.816031 CCATCAATTGAATAAACAAGCAGAGTT 59.184 33.333 13.09 0.00 33.22 3.01
1716 1964 5.596763 TCTACCTACCAACCTACCTTCAAT 58.403 41.667 0.00 0.00 0.00 2.57
1848 2099 1.228675 AGCACAGGAAAGCAAGGGG 60.229 57.895 0.00 0.00 0.00 4.79
1883 2134 0.382158 CCTGCATGCATCAAGCTCAG 59.618 55.000 22.97 5.79 45.94 3.35
1935 2186 5.493809 CTGTATCCTCCTACTACTCCTAGC 58.506 50.000 0.00 0.00 0.00 3.42
1936 2187 5.786457 TCCTGTATCCTCCTACTACTCCTAG 59.214 48.000 0.00 0.00 0.00 3.02
1937 2188 5.735157 TCCTGTATCCTCCTACTACTCCTA 58.265 45.833 0.00 0.00 0.00 2.94
1938 2189 4.579162 TCCTGTATCCTCCTACTACTCCT 58.421 47.826 0.00 0.00 0.00 3.69
1939 2190 4.263594 CCTCCTGTATCCTCCTACTACTCC 60.264 54.167 0.00 0.00 0.00 3.85
1940 2191 4.351704 ACCTCCTGTATCCTCCTACTACTC 59.648 50.000 0.00 0.00 0.00 2.59
2033 2284 6.761242 CCTTAATAATAAAAGGTGCCTTTGGC 59.239 38.462 16.02 1.01 44.50 4.52
2072 2605 2.036475 AGACACACTGGCACTAGTCAAG 59.964 50.000 0.00 0.00 0.00 3.02
2093 2626 2.136298 TGACAAAACCCAGCAGTTGA 57.864 45.000 0.00 0.00 0.00 3.18
2151 2686 9.627123 ATTCCGGACTTTTTCAATCTATATCAA 57.373 29.630 1.83 0.00 0.00 2.57
2372 2909 8.945481 TTTATGAAAATATGTTCCCTTGCATG 57.055 30.769 3.10 0.00 0.00 4.06
2391 2928 9.474920 GTTTCATTTTGACCATCAGTTTTATGA 57.525 29.630 0.00 0.00 0.00 2.15
2467 3100 2.789409 AGAGTGGTTGCATTACCTCC 57.211 50.000 8.97 0.29 39.04 4.30
2481 3114 7.414873 CCATCACATTCATGGAAAAGTAGAGTG 60.415 40.741 0.00 0.00 43.32 3.51
2482 3115 6.600822 CCATCACATTCATGGAAAAGTAGAGT 59.399 38.462 0.00 0.00 43.32 3.24
2628 3303 5.612725 AAGGTCAATCTTTTCCAGCAAAA 57.387 34.783 0.00 0.00 32.77 2.44
2632 3307 3.006217 AGCAAAGGTCAATCTTTTCCAGC 59.994 43.478 0.00 0.00 35.04 4.85
2633 3308 4.861102 AGCAAAGGTCAATCTTTTCCAG 57.139 40.909 0.00 0.00 35.04 3.86
2661 3336 2.159653 GCACGAAGAGAAAATGCACGAT 60.160 45.455 0.00 0.00 36.30 3.73
2692 3367 3.031964 CTTAGCACAGCTGCACGGC 62.032 63.158 15.27 12.73 46.97 5.68
2783 5678 9.153721 CTTAACGGTTGTAAAATATGGTGTCTA 57.846 33.333 3.07 0.00 0.00 2.59
2794 5689 8.987890 GTAGGTGTAATCTTAACGGTTGTAAAA 58.012 33.333 3.07 0.00 0.00 1.52
2803 5698 8.488651 AATTGGAAGTAGGTGTAATCTTAACG 57.511 34.615 0.00 0.00 0.00 3.18
2818 5713 8.528044 AAAGAACTACAACCAAATTGGAAGTA 57.472 30.769 20.25 17.56 40.96 2.24
2823 5718 5.757808 CCCAAAAGAACTACAACCAAATTGG 59.242 40.000 11.02 11.02 43.20 3.16
2894 5789 6.822676 TGTTTCAGCAAATTCATCCAAAAACT 59.177 30.769 0.00 0.00 0.00 2.66
2896 5791 7.804843 ATGTTTCAGCAAATTCATCCAAAAA 57.195 28.000 0.00 0.00 0.00 1.94
3027 5965 5.104360 AGGCAATATATGTCAACACTCCACT 60.104 40.000 0.00 0.00 35.54 4.00
3066 6004 7.362920 CCAGACCGTTTATCCAAAAATCAGAAT 60.363 37.037 0.00 0.00 0.00 2.40
3086 6024 5.841957 ATATTGAATTCAAGCACCAGACC 57.158 39.130 24.17 0.00 39.47 3.85
3155 6096 9.480053 CACATGGTCTTGAAAATTTAACTTCAT 57.520 29.630 0.00 0.00 31.85 2.57
3156 6097 7.925483 CCACATGGTCTTGAAAATTTAACTTCA 59.075 33.333 0.00 0.00 0.00 3.02
3160 6103 7.872483 ACATCCACATGGTCTTGAAAATTTAAC 59.128 33.333 0.00 0.00 33.82 2.01
3235 6178 8.418597 TGACACTTAGTTATATGGATCCCTAC 57.581 38.462 9.90 0.09 0.00 3.18
3236 6179 8.867097 GTTGACACTTAGTTATATGGATCCCTA 58.133 37.037 9.90 3.89 0.00 3.53
3254 6199 0.179032 TGCGAACCCATGTTGACACT 60.179 50.000 0.00 0.00 33.97 3.55
3259 6204 3.009723 ACTCTTATGCGAACCCATGTTG 58.990 45.455 0.00 0.00 33.97 3.33
3262 6207 5.811399 TTTAACTCTTATGCGAACCCATG 57.189 39.130 0.00 0.00 0.00 3.66
3497 6442 5.343593 CACATCGAACTAGAACTCTTGACAC 59.656 44.000 0.00 0.00 0.00 3.67
3498 6443 5.240844 TCACATCGAACTAGAACTCTTGACA 59.759 40.000 0.00 0.00 0.00 3.58
3499 6444 5.700846 TCACATCGAACTAGAACTCTTGAC 58.299 41.667 0.00 0.00 0.00 3.18
3500 6445 5.959618 TCACATCGAACTAGAACTCTTGA 57.040 39.130 0.00 0.00 0.00 3.02
3501 6446 6.454848 GCATTCACATCGAACTAGAACTCTTG 60.455 42.308 0.00 0.00 36.12 3.02
3502 6447 5.578727 GCATTCACATCGAACTAGAACTCTT 59.421 40.000 0.00 0.00 36.12 2.85
3503 6448 5.105752 GCATTCACATCGAACTAGAACTCT 58.894 41.667 0.00 0.00 36.12 3.24
3521 6466 1.669999 GGCCACAGGGATGTGCATTC 61.670 60.000 0.00 0.00 38.40 2.67
3547 6492 2.737359 GCCTCGACATCGACAATACCAA 60.737 50.000 0.00 0.00 44.22 3.67
3633 6579 0.036388 ACGACAACGGAGCATGGAAT 60.036 50.000 0.00 0.00 44.46 3.01
3680 6627 1.562672 GGCAAAGGGACCAGGAGCTA 61.563 60.000 0.00 0.00 0.00 3.32
3695 6642 3.717294 GAAGCGGGAGGAGGGCAA 61.717 66.667 0.00 0.00 0.00 4.52
3713 6660 1.218047 GTGCTACATGCCACGAGGA 59.782 57.895 1.86 0.00 42.00 3.71
3733 6680 2.434359 GGTGGTGCTAGTCGTGGC 60.434 66.667 0.00 0.00 0.00 5.01
3737 6684 0.389948 GAGGTTGGTGGTGCTAGTCG 60.390 60.000 0.00 0.00 0.00 4.18
3779 6726 1.919240 TCACTGTATGGAGGTGTCGT 58.081 50.000 0.00 0.00 33.30 4.34
3782 6729 5.544176 CCCTATATTCACTGTATGGAGGTGT 59.456 44.000 0.00 0.00 33.30 4.16
3783 6730 5.569630 GCCCTATATTCACTGTATGGAGGTG 60.570 48.000 0.00 0.00 0.00 4.00
3784 6731 4.532521 GCCCTATATTCACTGTATGGAGGT 59.467 45.833 0.00 0.00 0.00 3.85
3785 6732 4.780021 AGCCCTATATTCACTGTATGGAGG 59.220 45.833 0.00 0.00 0.00 4.30
3786 6733 5.105146 GGAGCCCTATATTCACTGTATGGAG 60.105 48.000 0.00 0.00 0.00 3.86
3787 6734 4.777896 GGAGCCCTATATTCACTGTATGGA 59.222 45.833 0.00 0.00 0.00 3.41
3788 6735 4.532126 TGGAGCCCTATATTCACTGTATGG 59.468 45.833 0.00 0.00 0.00 2.74
3789 6736 5.482908 GTGGAGCCCTATATTCACTGTATG 58.517 45.833 0.00 0.00 0.00 2.39
3790 6737 4.220821 CGTGGAGCCCTATATTCACTGTAT 59.779 45.833 0.00 0.00 0.00 2.29
3791 6738 3.572682 CGTGGAGCCCTATATTCACTGTA 59.427 47.826 0.00 0.00 0.00 2.74
3792 6739 2.365617 CGTGGAGCCCTATATTCACTGT 59.634 50.000 0.00 0.00 0.00 3.55
3793 6740 2.628178 TCGTGGAGCCCTATATTCACTG 59.372 50.000 0.00 0.00 0.00 3.66
3794 6741 2.628657 GTCGTGGAGCCCTATATTCACT 59.371 50.000 0.00 0.00 0.00 3.41
3795 6742 2.364324 TGTCGTGGAGCCCTATATTCAC 59.636 50.000 0.00 0.00 0.00 3.18
3796 6743 2.364324 GTGTCGTGGAGCCCTATATTCA 59.636 50.000 0.00 0.00 0.00 2.57
3797 6744 2.288886 GGTGTCGTGGAGCCCTATATTC 60.289 54.545 0.00 0.00 0.00 1.75
3798 6745 1.692519 GGTGTCGTGGAGCCCTATATT 59.307 52.381 0.00 0.00 0.00 1.28
3799 6746 1.133136 AGGTGTCGTGGAGCCCTATAT 60.133 52.381 0.00 0.00 0.00 0.86
3800 6747 0.260816 AGGTGTCGTGGAGCCCTATA 59.739 55.000 0.00 0.00 0.00 1.31
3801 6748 1.001760 AGGTGTCGTGGAGCCCTAT 59.998 57.895 0.00 0.00 0.00 2.57
3802 6749 1.681327 GAGGTGTCGTGGAGCCCTA 60.681 63.158 0.00 0.00 0.00 3.53
3803 6750 2.997897 GAGGTGTCGTGGAGCCCT 60.998 66.667 0.00 0.00 0.00 5.19
3804 6751 4.083862 GGAGGTGTCGTGGAGCCC 62.084 72.222 0.00 0.00 0.00 5.19
3805 6752 2.997897 AGGAGGTGTCGTGGAGCC 60.998 66.667 0.00 0.00 0.00 4.70
3806 6753 2.574399 GAGGAGGTGTCGTGGAGC 59.426 66.667 0.00 0.00 0.00 4.70
3807 6754 1.599606 CTGGAGGAGGTGTCGTGGAG 61.600 65.000 0.00 0.00 0.00 3.86
3808 6755 1.606601 CTGGAGGAGGTGTCGTGGA 60.607 63.158 0.00 0.00 0.00 4.02
3809 6756 1.606601 TCTGGAGGAGGTGTCGTGG 60.607 63.158 0.00 0.00 0.00 4.94
3810 6757 1.179174 TGTCTGGAGGAGGTGTCGTG 61.179 60.000 0.00 0.00 0.00 4.35
3811 6758 1.153061 TGTCTGGAGGAGGTGTCGT 59.847 57.895 0.00 0.00 0.00 4.34
3812 6759 1.587054 GTGTCTGGAGGAGGTGTCG 59.413 63.158 0.00 0.00 0.00 4.35
3813 6760 1.587054 CGTGTCTGGAGGAGGTGTC 59.413 63.158 0.00 0.00 0.00 3.67
3814 6761 1.908793 CCGTGTCTGGAGGAGGTGT 60.909 63.158 0.00 0.00 0.00 4.16
3824 6771 2.029290 AGCTAAGGTTGTACCGTGTCTG 60.029 50.000 0.00 0.00 44.90 3.51
3833 6780 3.178865 AGGTTAGCCAGCTAAGGTTGTA 58.821 45.455 12.26 0.00 38.95 2.41
3846 6793 2.582734 TTAGCGCGGGAAGGTTAGCC 62.583 60.000 8.83 0.00 0.00 3.93
3854 6801 2.494918 GAGAGCTTAGCGCGGGAA 59.505 61.111 8.83 0.00 45.59 3.97
3879 6826 2.365293 GGCCCACTTGAAAAATGTGAGT 59.635 45.455 0.00 0.00 36.30 3.41
3886 6833 2.851071 CGGCGGCCCACTTGAAAAA 61.851 57.895 14.55 0.00 0.00 1.94
3907 6855 1.296715 GACACAACAGGGCGAGGAT 59.703 57.895 0.00 0.00 0.00 3.24
3941 6889 3.824443 TCAGGTTGAGACTACGAACATGA 59.176 43.478 0.00 0.00 37.88 3.07
3948 6896 3.057526 TCATGTGTCAGGTTGAGACTACG 60.058 47.826 7.69 0.00 40.82 3.51
3951 6899 3.389329 AGTTCATGTGTCAGGTTGAGACT 59.611 43.478 7.69 0.00 40.82 3.24
3968 6916 1.272212 TGCGACACATCTGCTAGTTCA 59.728 47.619 0.00 0.00 0.00 3.18
3974 6922 0.742281 GATGGTGCGACACATCTGCT 60.742 55.000 11.20 0.00 35.86 4.24
3976 6924 1.596260 GATGATGGTGCGACACATCTG 59.404 52.381 11.20 0.00 35.86 2.90
3984 6932 0.176449 CTGTGAGGATGATGGTGCGA 59.824 55.000 0.00 0.00 0.00 5.10
3991 6939 1.556911 GGTGGTGTCTGTGAGGATGAT 59.443 52.381 0.00 0.00 0.00 2.45
4002 6950 3.541632 CAAGTAACTTGTGGTGGTGTCT 58.458 45.455 0.00 0.00 36.79 3.41
4052 7000 1.740718 GCTATAGGCGGCATTAGAGGC 60.741 57.143 13.08 2.11 0.00 4.70
4068 7016 2.866762 GTTCAAGCGAATCGGAAGCTAT 59.133 45.455 4.35 0.00 40.78 2.97
4073 7045 1.270625 ACCTGTTCAAGCGAATCGGAA 60.271 47.619 4.35 0.00 32.61 4.30
4085 7057 6.182627 TCCTATTCGTCTACTTACCTGTTCA 58.817 40.000 0.00 0.00 0.00 3.18
4163 7148 1.688811 GTTGACATAGGGCCCACCA 59.311 57.895 27.56 9.20 43.89 4.17
4170 7155 1.804151 CACAACCACGTTGACATAGGG 59.196 52.381 11.29 0.00 45.28 3.53
4174 7159 1.305201 GACCACAACCACGTTGACAT 58.695 50.000 11.29 0.00 45.28 3.06
4227 7212 2.647299 TCATAAGAGGCCCTTTTGACCA 59.353 45.455 17.12 3.23 37.73 4.02
4234 7219 7.790782 TGTAAAAATTTCATAAGAGGCCCTT 57.209 32.000 0.00 5.31 38.87 3.95
4270 7255 9.941664 CCAATTATATGAAAATGATATCTCGGC 57.058 33.333 3.98 0.00 0.00 5.54
4317 7303 4.898861 TGCAAAGGTGGTCCTAATTCTTTT 59.101 37.500 0.00 0.00 44.35 2.27
4367 7355 2.136298 TCAAGACAGGCACAAACCAA 57.864 45.000 0.00 0.00 0.00 3.67
4386 7374 5.085920 TCAAATGGACAGGGAATTGTGAAT 58.914 37.500 0.00 0.00 0.00 2.57
4442 7430 5.434352 TGCTCCGTATGTAGTCACTTATC 57.566 43.478 0.00 0.00 0.00 1.75
4447 7435 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
4448 7436 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
4449 7437 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4450 7438 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4451 7439 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4452 7440 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4453 7441 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4454 7442 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4455 7443 4.576463 GGATTCACTCATTTTGCTCCGTAT 59.424 41.667 0.00 0.00 0.00 3.06
4456 7444 3.938963 GGATTCACTCATTTTGCTCCGTA 59.061 43.478 0.00 0.00 0.00 4.02
4457 7445 2.749621 GGATTCACTCATTTTGCTCCGT 59.250 45.455 0.00 0.00 0.00 4.69
4458 7446 2.749076 TGGATTCACTCATTTTGCTCCG 59.251 45.455 0.00 0.00 0.00 4.63
4459 7447 3.507233 TGTGGATTCACTCATTTTGCTCC 59.493 43.478 5.55 0.00 43.94 4.70
4460 7448 4.217118 AGTGTGGATTCACTCATTTTGCTC 59.783 41.667 5.55 0.00 44.07 4.26
4461 7449 4.147321 AGTGTGGATTCACTCATTTTGCT 58.853 39.130 5.55 0.00 44.07 3.91
4462 7450 4.510038 AGTGTGGATTCACTCATTTTGC 57.490 40.909 5.55 0.00 44.07 3.68
4471 7459 8.723942 AGACATATTTTAGAGTGTGGATTCAC 57.276 34.615 0.00 0.00 43.87 3.18
4487 7475 9.678941 CGCATACGGATGTATATAGACATATTT 57.321 33.333 12.82 3.30 40.18 1.40
4506 7494 2.816689 TCAAATGGACTACCGCATACG 58.183 47.619 0.00 0.00 39.42 3.06
4507 7495 4.189231 ACTTCAAATGGACTACCGCATAC 58.811 43.478 0.00 0.00 39.42 2.39
4508 7496 4.161565 AGACTTCAAATGGACTACCGCATA 59.838 41.667 0.00 0.00 39.42 3.14
4509 7497 3.055094 AGACTTCAAATGGACTACCGCAT 60.055 43.478 0.00 0.00 39.42 4.73
4510 7498 2.301870 AGACTTCAAATGGACTACCGCA 59.698 45.455 0.00 0.00 39.42 5.69
4511 7499 2.930682 GAGACTTCAAATGGACTACCGC 59.069 50.000 0.00 0.00 39.42 5.68
4512 7500 4.457834 AGAGACTTCAAATGGACTACCG 57.542 45.455 0.00 0.00 39.42 4.02
4513 7501 8.617290 TTTTTAGAGACTTCAAATGGACTACC 57.383 34.615 0.00 0.00 0.00 3.18
4514 7502 9.490379 TCTTTTTAGAGACTTCAAATGGACTAC 57.510 33.333 0.00 0.00 0.00 2.73
4515 7503 9.490379 GTCTTTTTAGAGACTTCAAATGGACTA 57.510 33.333 0.00 0.00 42.18 2.59
4516 7504 7.993183 TGTCTTTTTAGAGACTTCAAATGGACT 59.007 33.333 6.59 0.00 44.99 3.85
4517 7505 8.154649 TGTCTTTTTAGAGACTTCAAATGGAC 57.845 34.615 6.59 0.00 44.99 4.02
4518 7506 8.746052 TTGTCTTTTTAGAGACTTCAAATGGA 57.254 30.769 6.59 0.00 44.99 3.41
4519 7507 9.971922 ATTTGTCTTTTTAGAGACTTCAAATGG 57.028 29.630 6.59 0.00 44.99 3.16
4534 7522 9.908152 CCTCCGTTTCTAAATATTTGTCTTTTT 57.092 29.630 11.05 0.00 0.00 1.94
4535 7523 8.520351 CCCTCCGTTTCTAAATATTTGTCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
4536 7524 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
4537 7525 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
4538 7526 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
4539 7527 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
4540 7528 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
4541 7529 8.202137 TCTACTCCCTCCGTTTCTAAATATTTG 58.798 37.037 11.05 1.65 0.00 2.32
4542 7530 8.315220 TCTACTCCCTCCGTTTCTAAATATTT 57.685 34.615 5.89 5.89 0.00 1.40
4543 7531 7.564292 ACTCTACTCCCTCCGTTTCTAAATATT 59.436 37.037 0.00 0.00 0.00 1.28
4544 7532 7.068061 ACTCTACTCCCTCCGTTTCTAAATAT 58.932 38.462 0.00 0.00 0.00 1.28
4545 7533 6.430007 ACTCTACTCCCTCCGTTTCTAAATA 58.570 40.000 0.00 0.00 0.00 1.40
4546 7534 5.270794 ACTCTACTCCCTCCGTTTCTAAAT 58.729 41.667 0.00 0.00 0.00 1.40
4547 7535 4.670765 ACTCTACTCCCTCCGTTTCTAAA 58.329 43.478 0.00 0.00 0.00 1.85
4548 7536 4.313020 ACTCTACTCCCTCCGTTTCTAA 57.687 45.455 0.00 0.00 0.00 2.10
4549 7537 5.643421 ATACTCTACTCCCTCCGTTTCTA 57.357 43.478 0.00 0.00 0.00 2.10
4550 7538 2.903375 ACTCTACTCCCTCCGTTTCT 57.097 50.000 0.00 0.00 0.00 2.52
4551 7539 5.619220 TCTATACTCTACTCCCTCCGTTTC 58.381 45.833 0.00 0.00 0.00 2.78
4552 7540 5.643421 TCTATACTCTACTCCCTCCGTTT 57.357 43.478 0.00 0.00 0.00 3.60
4553 7541 5.643421 TTCTATACTCTACTCCCTCCGTT 57.357 43.478 0.00 0.00 0.00 4.44
4554 7542 5.846528 ATTCTATACTCTACTCCCTCCGT 57.153 43.478 0.00 0.00 0.00 4.69
4555 7543 6.715718 TCAAATTCTATACTCTACTCCCTCCG 59.284 42.308 0.00 0.00 0.00 4.63
4556 7544 8.527810 CATCAAATTCTATACTCTACTCCCTCC 58.472 40.741 0.00 0.00 0.00 4.30
4557 7545 8.527810 CCATCAAATTCTATACTCTACTCCCTC 58.472 40.741 0.00 0.00 0.00 4.30
4558 7546 7.456269 CCCATCAAATTCTATACTCTACTCCCT 59.544 40.741 0.00 0.00 0.00 4.20
4559 7547 7.235812 ACCCATCAAATTCTATACTCTACTCCC 59.764 40.741 0.00 0.00 0.00 4.30
4560 7548 8.196378 ACCCATCAAATTCTATACTCTACTCC 57.804 38.462 0.00 0.00 0.00 3.85
4702 7692 4.756868 CTCGCTGGAGTTAATTACGAAC 57.243 45.455 0.00 0.00 35.48 3.95
4714 7704 0.249238 GGATAGCACACTCGCTGGAG 60.249 60.000 0.00 0.00 43.68 3.86
4724 7714 4.955811 ATTTGTCGGATAGGATAGCACA 57.044 40.909 0.00 0.00 0.00 4.57
4732 7722 5.817816 ACTGAAGCTTAATTTGTCGGATAGG 59.182 40.000 0.00 0.00 0.00 2.57
4733 7723 6.910536 ACTGAAGCTTAATTTGTCGGATAG 57.089 37.500 0.00 0.00 0.00 2.08
4766 7868 2.434702 ACGGTATTTAGCAGGGGAAGAG 59.565 50.000 0.00 0.00 0.00 2.85
4783 7885 1.217244 GTCCTGCGGTTCATACGGT 59.783 57.895 0.00 0.00 0.00 4.83
5050 8161 2.590007 CCCATGTAGAGCCGCTGC 60.590 66.667 0.00 0.00 37.95 5.25
5458 8569 4.619227 GCCATGCCATGCCATGCC 62.619 66.667 11.13 0.00 40.92 4.40
5459 8570 2.204461 TAGCCATGCCATGCCATGC 61.204 57.895 11.13 7.00 40.92 4.06
5460 8571 1.110518 TGTAGCCATGCCATGCCATG 61.111 55.000 9.68 9.68 41.71 3.66
5461 8572 0.826256 CTGTAGCCATGCCATGCCAT 60.826 55.000 0.00 0.00 0.00 4.40
5462 8573 1.454295 CTGTAGCCATGCCATGCCA 60.454 57.895 0.00 0.00 0.00 4.92
5503 8614 4.706962 AGTTGGATTAATGGAAGCACCTTC 59.293 41.667 0.00 0.00 39.52 3.46
5504 8615 4.463891 CAGTTGGATTAATGGAAGCACCTT 59.536 41.667 0.00 0.00 39.86 3.50
5505 8616 4.019174 CAGTTGGATTAATGGAAGCACCT 58.981 43.478 0.00 0.00 39.86 4.00
5506 8617 4.016444 TCAGTTGGATTAATGGAAGCACC 58.984 43.478 0.00 0.00 39.54 5.01
5507 8618 5.415701 TCTTCAGTTGGATTAATGGAAGCAC 59.584 40.000 0.00 0.00 34.21 4.40
5508 8619 5.569355 TCTTCAGTTGGATTAATGGAAGCA 58.431 37.500 0.00 0.00 34.21 3.91
5509 8620 6.460676 CCATCTTCAGTTGGATTAATGGAAGC 60.461 42.308 0.00 0.00 37.12 3.86
5510 8621 6.604795 ACCATCTTCAGTTGGATTAATGGAAG 59.395 38.462 10.39 0.00 38.09 3.46
5511 8622 6.377996 CACCATCTTCAGTTGGATTAATGGAA 59.622 38.462 10.39 0.00 38.09 3.53
5512 8623 5.887598 CACCATCTTCAGTTGGATTAATGGA 59.112 40.000 10.39 0.00 38.09 3.41
5513 8624 5.068198 CCACCATCTTCAGTTGGATTAATGG 59.932 44.000 10.39 4.15 38.09 3.16
5514 8625 5.068198 CCCACCATCTTCAGTTGGATTAATG 59.932 44.000 10.39 0.00 38.09 1.90
5515 8626 5.044179 TCCCACCATCTTCAGTTGGATTAAT 60.044 40.000 10.39 0.00 38.09 1.40
5516 8627 4.290985 TCCCACCATCTTCAGTTGGATTAA 59.709 41.667 10.39 0.00 38.09 1.40
5517 8628 3.849574 TCCCACCATCTTCAGTTGGATTA 59.150 43.478 10.39 0.00 38.09 1.75
5518 8629 2.649312 TCCCACCATCTTCAGTTGGATT 59.351 45.455 10.39 0.00 38.09 3.01
5519 8630 2.278245 TCCCACCATCTTCAGTTGGAT 58.722 47.619 10.39 0.00 38.09 3.41
5520 8631 1.741028 TCCCACCATCTTCAGTTGGA 58.259 50.000 10.39 0.00 38.09 3.53
5521 8632 2.240667 AGATCCCACCATCTTCAGTTGG 59.759 50.000 2.79 2.79 40.01 3.77
5522 8633 3.276857 CAGATCCCACCATCTTCAGTTG 58.723 50.000 0.00 0.00 30.07 3.16
5523 8634 2.240667 CCAGATCCCACCATCTTCAGTT 59.759 50.000 0.00 0.00 30.07 3.16
5524 8635 1.842562 CCAGATCCCACCATCTTCAGT 59.157 52.381 0.00 0.00 30.07 3.41
5525 8636 1.476471 GCCAGATCCCACCATCTTCAG 60.476 57.143 0.00 0.00 30.07 3.02
5526 8637 0.548031 GCCAGATCCCACCATCTTCA 59.452 55.000 0.00 0.00 30.07 3.02
5593 8731 6.671605 TCATCAATCAAACAATCCCCTATGA 58.328 36.000 0.00 0.00 0.00 2.15
5640 8778 6.073657 GCTAAGCAGCTCTTAATCTCTTCATG 60.074 42.308 0.00 0.00 44.93 3.07
5831 8969 2.549754 AGCCTGACACTTTCATCAAACG 59.450 45.455 0.00 0.00 32.17 3.60
5843 8981 0.947244 CAAGTGGAACAGCCTGACAC 59.053 55.000 0.00 4.81 41.80 3.67
5913 9051 1.803366 AACTCCGGCGTCTTCGTTCT 61.803 55.000 6.01 0.00 39.49 3.01
5914 9052 1.372623 AACTCCGGCGTCTTCGTTC 60.373 57.895 6.01 0.00 39.49 3.95
5917 9055 2.049433 ACAACTCCGGCGTCTTCG 60.049 61.111 6.01 0.00 40.37 3.79
5926 9064 4.701956 AATTTAATGCAGGACAACTCCG 57.298 40.909 0.00 0.00 42.22 4.63
5968 9109 7.916450 GTGTGAACCTATATTACTCTGTCTGTC 59.084 40.741 0.00 0.00 0.00 3.51
5984 9125 8.042515 AGTTAGTTTAGTTGTTGTGTGAACCTA 58.957 33.333 0.00 0.00 0.00 3.08
6001 9142 9.309516 CTGTGAGTGTTGACTTAAGTTAGTTTA 57.690 33.333 10.02 0.00 30.16 2.01
6009 9150 4.553547 GCAAGCTGTGAGTGTTGACTTAAG 60.554 45.833 0.00 0.00 30.16 1.85
6013 9154 1.303309 GCAAGCTGTGAGTGTTGACT 58.697 50.000 0.00 0.00 33.98 3.41
6017 9158 1.893808 CGGGCAAGCTGTGAGTGTT 60.894 57.895 0.00 0.00 0.00 3.32
6019 9160 2.031012 TCGGGCAAGCTGTGAGTG 59.969 61.111 0.00 0.00 0.00 3.51
6040 9182 2.028190 CTATCCGGTGAGCCTGCG 59.972 66.667 0.00 0.00 0.00 5.18
6042 9184 0.107703 TTTGCTATCCGGTGAGCCTG 60.108 55.000 22.16 1.57 37.94 4.85
6053 9195 9.384764 ACTGAAGGAGTAGTTTATTTTGCTATC 57.615 33.333 0.00 0.00 30.86 2.08
6138 10955 6.376248 ACTTAGGGTAATACTCCATCCGTAA 58.624 40.000 0.00 0.00 0.00 3.18
6139 10956 5.957132 ACTTAGGGTAATACTCCATCCGTA 58.043 41.667 0.00 0.00 0.00 4.02
6140 10957 4.812653 ACTTAGGGTAATACTCCATCCGT 58.187 43.478 0.00 0.00 0.00 4.69
6141 10958 5.105837 GCTACTTAGGGTAATACTCCATCCG 60.106 48.000 0.00 0.00 0.00 4.18
6142 10959 5.778750 TGCTACTTAGGGTAATACTCCATCC 59.221 44.000 0.00 0.00 0.00 3.51
6143 10960 6.912951 TGCTACTTAGGGTAATACTCCATC 57.087 41.667 0.00 0.00 0.00 3.51
6144 10961 6.440965 GGATGCTACTTAGGGTAATACTCCAT 59.559 42.308 0.00 0.00 0.00 3.41
6145 10962 5.778750 GGATGCTACTTAGGGTAATACTCCA 59.221 44.000 0.00 0.00 0.00 3.86
6146 10963 5.778750 TGGATGCTACTTAGGGTAATACTCC 59.221 44.000 0.00 0.00 0.00 3.85
6147 10964 6.267014 TGTGGATGCTACTTAGGGTAATACTC 59.733 42.308 0.00 0.00 0.00 2.59
6148 10965 6.141083 TGTGGATGCTACTTAGGGTAATACT 58.859 40.000 0.00 0.00 0.00 2.12
6149 10966 6.415206 TGTGGATGCTACTTAGGGTAATAC 57.585 41.667 0.00 0.00 0.00 1.89
6150 10967 5.542635 CCTGTGGATGCTACTTAGGGTAATA 59.457 44.000 0.00 0.00 0.00 0.98
6151 10968 4.348168 CCTGTGGATGCTACTTAGGGTAAT 59.652 45.833 0.00 0.00 0.00 1.89
6152 10969 3.709653 CCTGTGGATGCTACTTAGGGTAA 59.290 47.826 0.00 0.00 0.00 2.85
6153 10970 3.052414 TCCTGTGGATGCTACTTAGGGTA 60.052 47.826 0.00 0.00 0.00 3.69
6154 10971 2.119495 CCTGTGGATGCTACTTAGGGT 58.881 52.381 0.00 0.00 0.00 4.34
6155 10972 2.366916 CTCCTGTGGATGCTACTTAGGG 59.633 54.545 0.00 0.00 0.00 3.53
6156 10973 2.224161 GCTCCTGTGGATGCTACTTAGG 60.224 54.545 0.00 0.00 0.00 2.69
6157 10974 2.697751 AGCTCCTGTGGATGCTACTTAG 59.302 50.000 8.17 0.00 35.55 2.18
6158 10975 2.695666 GAGCTCCTGTGGATGCTACTTA 59.304 50.000 0.87 0.00 36.72 2.24
6159 10976 1.484240 GAGCTCCTGTGGATGCTACTT 59.516 52.381 0.87 0.00 36.72 2.24
6160 10977 1.118838 GAGCTCCTGTGGATGCTACT 58.881 55.000 0.87 0.00 36.72 2.57
6161 10978 1.068434 GAGAGCTCCTGTGGATGCTAC 59.932 57.143 10.93 5.45 36.72 3.58
6162 10979 1.407936 GAGAGCTCCTGTGGATGCTA 58.592 55.000 10.93 0.00 36.72 3.49
6163 10980 1.674764 CGAGAGCTCCTGTGGATGCT 61.675 60.000 10.93 9.23 38.31 3.79
6164 10981 1.227205 CGAGAGCTCCTGTGGATGC 60.227 63.158 10.93 0.00 0.00 3.91
6165 10982 0.179116 CACGAGAGCTCCTGTGGATG 60.179 60.000 22.14 5.06 0.00 3.51
6166 10983 0.323816 TCACGAGAGCTCCTGTGGAT 60.324 55.000 26.63 2.85 33.25 3.41
6167 10984 1.074951 TCACGAGAGCTCCTGTGGA 59.925 57.895 26.63 15.56 33.25 4.02
6168 10985 1.214062 GTCACGAGAGCTCCTGTGG 59.786 63.158 26.63 14.02 33.25 4.17
6169 10986 1.154131 CGTCACGAGAGCTCCTGTG 60.154 63.158 23.30 23.30 0.00 3.66
6170 10987 2.983930 GCGTCACGAGAGCTCCTGT 61.984 63.158 10.93 6.34 0.00 4.00
6171 10988 2.202544 GCGTCACGAGAGCTCCTG 60.203 66.667 10.93 5.60 0.00 3.86
6172 10989 1.599606 ATTGCGTCACGAGAGCTCCT 61.600 55.000 10.93 0.00 0.00 3.69
6173 10990 0.737715 AATTGCGTCACGAGAGCTCC 60.738 55.000 10.93 0.68 0.00 4.70
6174 10991 1.909376 TAATTGCGTCACGAGAGCTC 58.091 50.000 5.27 5.27 0.00 4.09
6175 10992 2.363788 TTAATTGCGTCACGAGAGCT 57.636 45.000 0.00 0.00 0.00 4.09
6176 10993 2.348666 ACATTAATTGCGTCACGAGAGC 59.651 45.455 0.00 0.00 0.00 4.09
6177 10994 3.367932 ACACATTAATTGCGTCACGAGAG 59.632 43.478 0.00 0.00 0.00 3.20
6178 10995 3.322369 ACACATTAATTGCGTCACGAGA 58.678 40.909 0.00 0.00 0.00 4.04
6186 11003 6.085458 GCAAAGATATCGACACATTAATTGCG 59.915 38.462 0.00 0.00 0.00 4.85
6189 11006 8.458052 TGTTGCAAAGATATCGACACATTAATT 58.542 29.630 0.00 0.00 0.00 1.40
6193 11010 5.391950 GGTGTTGCAAAGATATCGACACATT 60.392 40.000 0.00 0.00 43.45 2.71
6197 11014 3.669536 TGGTGTTGCAAAGATATCGACA 58.330 40.909 0.00 0.00 0.00 4.35
6200 11017 4.437390 GGAACTGGTGTTGCAAAGATATCG 60.437 45.833 0.00 0.00 42.86 2.92
6211 11028 4.448537 TGAAAACTTGGAACTGGTGTTG 57.551 40.909 0.00 0.00 36.39 3.33
6215 11032 3.086282 ACGTTGAAAACTTGGAACTGGT 58.914 40.909 0.00 0.00 46.99 4.00
6217 11034 4.102649 GGAACGTTGAAAACTTGGAACTG 58.897 43.478 5.00 0.00 46.99 3.16
6224 11041 3.181504 CCGAACTGGAACGTTGAAAACTT 60.182 43.478 5.00 0.00 42.89 2.66
6225 11042 2.353579 CCGAACTGGAACGTTGAAAACT 59.646 45.455 5.00 0.00 42.89 2.66
6228 11045 0.658897 GCCGAACTGGAACGTTGAAA 59.341 50.000 5.00 0.00 42.00 2.69
6237 11054 1.001020 AATGCCATGCCGAACTGGA 60.001 52.632 1.84 0.00 42.00 3.86
6239 11056 1.517694 GCAATGCCATGCCGAACTG 60.518 57.895 0.00 0.00 40.49 3.16
6240 11057 2.887360 GCAATGCCATGCCGAACT 59.113 55.556 0.00 0.00 40.49 3.01
6246 11063 0.390603 TTTCTGCAGCAATGCCATGC 60.391 50.000 9.47 11.83 46.78 4.06
6248 11065 2.843401 TTTTTCTGCAGCAATGCCAT 57.157 40.000 9.47 0.00 0.00 4.40
6249 11066 2.843401 ATTTTTCTGCAGCAATGCCA 57.157 40.000 9.47 0.00 0.00 4.92
6250 11067 4.495184 GCATAATTTTTCTGCAGCAATGCC 60.495 41.667 9.47 0.00 35.96 4.40
6251 11068 4.093703 TGCATAATTTTTCTGCAGCAATGC 59.906 37.500 9.47 11.52 40.75 3.56
6260 11085 9.421806 TGTACCTTCAAATGCATAATTTTTCTG 57.578 29.630 0.00 0.00 36.28 3.02
6270 11095 5.163723 CGACTGATTGTACCTTCAAATGCAT 60.164 40.000 0.00 0.00 0.00 3.96
6282 11107 2.120232 CTCGCATCCGACTGATTGTAC 58.880 52.381 0.00 0.00 38.82 2.90
6292 11117 2.043349 TCTTCCCCTCGCATCCGA 60.043 61.111 0.00 0.00 42.01 4.55
6293 11118 2.107141 GTCTTCCCCTCGCATCCG 59.893 66.667 0.00 0.00 0.00 4.18
6340 11165 3.481453 GCTCTTCTTTGGTCTCTTTGGT 58.519 45.455 0.00 0.00 0.00 3.67
6351 11176 1.610522 CAGTGTTGGGGCTCTTCTTTG 59.389 52.381 0.00 0.00 0.00 2.77
6370 11195 5.130975 AGCACTATGAGAATTATGTGGACCA 59.869 40.000 0.00 0.00 0.00 4.02
6373 11198 6.239600 GGGTAGCACTATGAGAATTATGTGGA 60.240 42.308 0.00 0.00 0.00 4.02
6391 11216 3.413327 CTCGCTTCTCTATAGGGTAGCA 58.587 50.000 25.48 14.44 0.00 3.49
6392 11217 2.750712 CCTCGCTTCTCTATAGGGTAGC 59.249 54.545 18.66 18.66 0.00 3.58
6395 11220 1.133450 TGCCTCGCTTCTCTATAGGGT 60.133 52.381 0.00 0.00 0.00 4.34
6401 11226 1.678627 CTAGCTTGCCTCGCTTCTCTA 59.321 52.381 0.00 0.00 38.86 2.43
6403 11228 0.529555 CCTAGCTTGCCTCGCTTCTC 60.530 60.000 0.00 0.00 38.86 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.