Multiple sequence alignment - TraesCS5B01G106900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G106900 chr5B 100.000 4840 0 0 1 4840 145024347 145019508 0.000000e+00 8938.0
1 TraesCS5B01G106900 chr5B 92.025 163 11 2 4 165 403785398 403785237 1.360000e-55 228.0
2 TraesCS5B01G106900 chr5A 91.753 3747 180 58 603 4251 156950031 156946316 0.000000e+00 5088.0
3 TraesCS5B01G106900 chr5A 86.264 364 41 5 4440 4801 156248464 156248108 2.110000e-103 387.0
4 TraesCS5B01G106900 chr5A 90.850 153 9 2 224 375 156950276 156950128 2.950000e-47 200.0
5 TraesCS5B01G106900 chr5A 84.574 188 15 9 4249 4435 156922777 156922951 1.790000e-39 174.0
6 TraesCS5B01G106900 chr5A 87.387 111 8 3 392 499 156950141 156950034 6.580000e-24 122.0
7 TraesCS5B01G106900 chr5A 83.495 103 17 0 504 606 554063441 554063339 3.990000e-16 97.1
8 TraesCS5B01G106900 chr5D 90.980 3825 164 71 602 4360 133670949 133667240 0.000000e+00 4985.0
9 TraesCS5B01G106900 chr5D 85.641 195 18 7 187 375 133671242 133671052 3.820000e-46 196.0
10 TraesCS5B01G106900 chr5D 92.857 126 7 1 4358 4481 133666923 133666798 1.070000e-41 182.0
11 TraesCS5B01G106900 chr5D 85.586 111 9 3 398 501 133671059 133670949 5.120000e-20 110.0
12 TraesCS5B01G106900 chr6B 94.444 162 8 1 4 165 617034927 617034767 1.040000e-61 248.0
13 TraesCS5B01G106900 chr6B 84.466 103 16 0 504 606 239359074 239359176 8.570000e-18 102.0
14 TraesCS5B01G106900 chr1B 92.638 163 11 1 4 165 566366743 566366581 2.910000e-57 233.0
15 TraesCS5B01G106900 chr1B 91.617 167 13 1 4 169 17888597 17888431 3.770000e-56 230.0
16 TraesCS5B01G106900 chr1B 90.000 170 16 1 1 169 492869168 492869337 8.160000e-53 219.0
17 TraesCS5B01G106900 chr1B 90.000 170 16 1 1 169 677584737 677584906 8.160000e-53 219.0
18 TraesCS5B01G106900 chr2B 91.667 168 11 3 4 169 571524349 571524183 3.770000e-56 230.0
19 TraesCS5B01G106900 chr2B 84.348 115 18 0 504 618 751587882 751587768 3.960000e-21 113.0
20 TraesCS5B01G106900 chr2B 86.139 101 14 0 504 604 448287929 448287829 5.120000e-20 110.0
21 TraesCS5B01G106900 chr7B 91.515 165 14 0 1 165 162266733 162266897 1.360000e-55 228.0
22 TraesCS5B01G106900 chr7B 79.245 106 17 4 4133 4235 532665148 532665251 8.690000e-08 69.4
23 TraesCS5B01G106900 chr3B 89.560 182 13 5 1 178 618028868 618029047 4.870000e-55 226.0
24 TraesCS5B01G106900 chr3B 86.735 98 13 0 504 601 217574992 217575089 5.120000e-20 110.0
25 TraesCS5B01G106900 chr3B 85.149 101 15 0 504 604 820344963 820344863 2.380000e-18 104.0
26 TraesCS5B01G106900 chr3B 83.810 105 16 1 504 607 61882596 61882700 1.110000e-16 99.0
27 TraesCS5B01G106900 chr3B 83.654 104 17 0 504 607 778457715 778457612 1.110000e-16 99.0
28 TraesCS5B01G106900 chr2A 85.294 102 15 0 504 605 675853408 675853509 6.630000e-19 106.0
29 TraesCS5B01G106900 chr2A 84.762 105 13 2 504 606 773403676 773403779 8.570000e-18 102.0
30 TraesCS5B01G106900 chr1A 87.778 90 11 0 504 593 517377127 517377038 6.630000e-19 106.0
31 TraesCS5B01G106900 chr3A 82.524 103 16 2 504 605 44716763 44716864 6.670000e-14 89.8
32 TraesCS5B01G106900 chr7A 81.731 104 16 3 504 605 403360856 403360754 3.100000e-12 84.2
33 TraesCS5B01G106900 chr7A 80.769 104 19 1 4133 4235 572491401 572491504 4.020000e-11 80.5
34 TraesCS5B01G106900 chr6A 97.297 37 1 0 4199 4235 485699287 485699323 4.040000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G106900 chr5B 145019508 145024347 4839 True 8938.000000 8938 100.000000 1 4840 1 chr5B.!!$R1 4839
1 TraesCS5B01G106900 chr5A 156946316 156950276 3960 True 1803.333333 5088 89.996667 224 4251 3 chr5A.!!$R3 4027
2 TraesCS5B01G106900 chr5D 133666798 133671242 4444 True 1368.250000 4985 88.766000 187 4481 4 chr5D.!!$R1 4294

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 448 0.108089 TCCACGCGCTTATTGGCTAA 60.108 50.0 5.73 0.0 0.0 3.09 F
2249 2395 0.469331 ATGCGGGAGGGATCGAACTA 60.469 55.0 0.00 0.0 0.0 2.24 F
2580 2764 0.813184 CGTCTAGCTCCCGTTACCAA 59.187 55.0 0.00 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2438 2589 0.179073 ATCCAGGCATTCGTCGGAAG 60.179 55.0 0.0 0.0 35.19 3.46 R
3826 4018 0.042448 TATCGATCACTGCGTCGTCG 60.042 55.0 0.0 0.0 38.85 5.12 R
4567 5082 0.392863 TGTTCGATACGTCTCCCCGA 60.393 55.0 0.0 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.887290 CGTAAAGCCGACCCGTAA 57.113 55.556 0.00 0.00 0.00 3.18
18 19 3.120627 CGTAAAGCCGACCCGTAAA 57.879 52.632 0.00 0.00 0.00 2.01
19 20 1.427435 CGTAAAGCCGACCCGTAAAA 58.573 50.000 0.00 0.00 0.00 1.52
20 21 1.797635 CGTAAAGCCGACCCGTAAAAA 59.202 47.619 0.00 0.00 0.00 1.94
84 85 2.677524 GCATCTGTGCCAGCCCAA 60.678 61.111 0.00 0.00 45.76 4.12
85 86 2.707849 GCATCTGTGCCAGCCCAAG 61.708 63.158 0.00 0.00 45.76 3.61
86 87 2.362120 ATCTGTGCCAGCCCAAGC 60.362 61.111 0.00 0.00 40.32 4.01
103 104 3.981308 CGGACCCGCAAAATCTGT 58.019 55.556 0.00 0.00 0.00 3.41
104 105 2.253513 CGGACCCGCAAAATCTGTT 58.746 52.632 0.00 0.00 0.00 3.16
105 106 0.596082 CGGACCCGCAAAATCTGTTT 59.404 50.000 0.00 0.00 0.00 2.83
106 107 1.000717 CGGACCCGCAAAATCTGTTTT 60.001 47.619 0.00 0.00 38.03 2.43
114 115 3.407588 CAAAATCTGTTTTGCGCGAAG 57.592 42.857 12.10 0.00 45.27 3.79
115 116 2.774439 AAATCTGTTTTGCGCGAAGT 57.226 40.000 12.10 0.00 0.00 3.01
116 117 2.036556 AATCTGTTTTGCGCGAAGTG 57.963 45.000 12.10 5.22 43.41 3.16
126 127 2.173382 GCGAAGTGCAAACGCGAT 59.827 55.556 15.93 0.00 45.45 4.58
127 128 1.440353 GCGAAGTGCAAACGCGATT 60.440 52.632 15.93 3.59 45.45 3.34
128 129 0.996727 GCGAAGTGCAAACGCGATTT 60.997 50.000 15.93 7.01 45.45 2.17
155 156 3.790437 CAGGATGCGGGGTCTGCT 61.790 66.667 0.30 0.00 0.00 4.24
156 157 2.041922 AGGATGCGGGGTCTGCTA 60.042 61.111 0.30 0.00 0.00 3.49
157 158 2.136878 AGGATGCGGGGTCTGCTAG 61.137 63.158 0.30 0.00 0.00 3.42
158 159 2.134287 GGATGCGGGGTCTGCTAGA 61.134 63.158 0.00 0.00 0.00 2.43
159 160 1.365633 GATGCGGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 0.00 2.43
160 161 1.381872 ATGCGGGGTCTGCTAGAGT 60.382 57.895 0.00 0.00 0.00 3.24
161 162 0.978146 ATGCGGGGTCTGCTAGAGTT 60.978 55.000 0.00 0.00 0.00 3.01
162 163 1.153549 GCGGGGTCTGCTAGAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
163 164 1.153549 CGGGGTCTGCTAGAGTTGC 60.154 63.158 0.00 0.00 0.00 4.17
164 165 1.608717 CGGGGTCTGCTAGAGTTGCT 61.609 60.000 0.00 0.00 0.00 3.91
165 166 0.615850 GGGGTCTGCTAGAGTTGCTT 59.384 55.000 0.00 0.00 0.00 3.91
166 167 1.003696 GGGGTCTGCTAGAGTTGCTTT 59.996 52.381 0.00 0.00 0.00 3.51
167 168 2.553247 GGGGTCTGCTAGAGTTGCTTTT 60.553 50.000 0.00 0.00 0.00 2.27
168 169 3.307480 GGGGTCTGCTAGAGTTGCTTTTA 60.307 47.826 0.00 0.00 0.00 1.52
169 170 3.685272 GGGTCTGCTAGAGTTGCTTTTAC 59.315 47.826 0.00 0.00 0.00 2.01
170 171 4.315803 GGTCTGCTAGAGTTGCTTTTACA 58.684 43.478 0.00 0.00 0.00 2.41
171 172 4.152580 GGTCTGCTAGAGTTGCTTTTACAC 59.847 45.833 0.00 0.00 0.00 2.90
172 173 4.750098 GTCTGCTAGAGTTGCTTTTACACA 59.250 41.667 0.00 0.00 0.00 3.72
173 174 4.750098 TCTGCTAGAGTTGCTTTTACACAC 59.250 41.667 0.00 0.00 0.00 3.82
174 175 3.813166 TGCTAGAGTTGCTTTTACACACC 59.187 43.478 0.00 0.00 0.00 4.16
175 176 4.065789 GCTAGAGTTGCTTTTACACACCT 58.934 43.478 0.00 0.00 0.00 4.00
176 177 5.221561 TGCTAGAGTTGCTTTTACACACCTA 60.222 40.000 0.00 0.00 0.00 3.08
177 178 5.348997 GCTAGAGTTGCTTTTACACACCTAG 59.651 44.000 0.00 0.00 0.00 3.02
178 179 5.546621 AGAGTTGCTTTTACACACCTAGA 57.453 39.130 0.00 0.00 0.00 2.43
179 180 5.298347 AGAGTTGCTTTTACACACCTAGAC 58.702 41.667 0.00 0.00 0.00 2.59
180 181 4.056050 AGTTGCTTTTACACACCTAGACG 58.944 43.478 0.00 0.00 0.00 4.18
181 182 3.034721 TGCTTTTACACACCTAGACGG 57.965 47.619 0.00 0.00 39.35 4.79
182 183 2.629137 TGCTTTTACACACCTAGACGGA 59.371 45.455 0.00 0.00 36.31 4.69
183 184 3.251571 GCTTTTACACACCTAGACGGAG 58.748 50.000 0.00 0.00 36.31 4.63
184 185 3.846360 CTTTTACACACCTAGACGGAGG 58.154 50.000 0.00 0.00 42.89 4.30
185 186 1.843368 TTACACACCTAGACGGAGGG 58.157 55.000 5.42 0.00 41.36 4.30
193 194 1.540797 CCTAGACGGAGGGAGTACTCG 60.541 61.905 16.56 8.02 38.39 4.18
221 222 6.454981 CCGTTCACAAATTTTGAGGTGTTTTC 60.455 38.462 15.81 0.00 33.17 2.29
223 224 5.955488 TCACAAATTTTGAGGTGTTTTCGA 58.045 33.333 15.81 0.00 33.17 3.71
225 226 7.708051 TCACAAATTTTGAGGTGTTTTCGATA 58.292 30.769 15.81 0.00 33.17 2.92
226 227 8.356657 TCACAAATTTTGAGGTGTTTTCGATAT 58.643 29.630 15.81 0.00 33.17 1.63
327 334 2.946329 ACAAATCGCACGGGCAATTATA 59.054 40.909 11.77 0.00 41.24 0.98
328 335 3.568007 ACAAATCGCACGGGCAATTATAT 59.432 39.130 11.77 0.00 41.24 0.86
329 336 4.757657 ACAAATCGCACGGGCAATTATATA 59.242 37.500 11.77 0.00 41.24 0.86
330 337 5.414454 ACAAATCGCACGGGCAATTATATAT 59.586 36.000 11.77 0.00 41.24 0.86
375 382 1.040339 AAGCCAAGGGTGCGAACAAA 61.040 50.000 0.00 0.00 0.00 2.83
376 383 0.827507 AGCCAAGGGTGCGAACAAAT 60.828 50.000 0.00 0.00 0.00 2.32
378 385 1.540146 GCCAAGGGTGCGAACAAATTT 60.540 47.619 0.00 0.00 0.00 1.82
379 386 2.832563 CCAAGGGTGCGAACAAATTTT 58.167 42.857 0.00 0.00 0.00 1.82
380 387 3.202097 CCAAGGGTGCGAACAAATTTTT 58.798 40.909 0.00 0.00 0.00 1.94
399 406 1.652012 TTTTTGCGAGAAGGGTGCG 59.348 52.632 0.00 0.00 0.00 5.34
400 407 0.816018 TTTTTGCGAGAAGGGTGCGA 60.816 50.000 0.00 0.00 0.00 5.10
401 408 0.816018 TTTTGCGAGAAGGGTGCGAA 60.816 50.000 0.00 0.00 0.00 4.70
402 409 1.503818 TTTGCGAGAAGGGTGCGAAC 61.504 55.000 0.00 0.00 0.00 3.95
403 410 2.357034 GCGAGAAGGGTGCGAACA 60.357 61.111 0.00 0.00 0.00 3.18
404 411 1.959226 GCGAGAAGGGTGCGAACAA 60.959 57.895 0.00 0.00 0.00 2.83
405 412 1.298859 GCGAGAAGGGTGCGAACAAT 61.299 55.000 0.00 0.00 0.00 2.71
406 413 2.004583 CGAGAAGGGTGCGAACAATA 57.995 50.000 0.00 0.00 0.00 1.90
407 414 2.550978 CGAGAAGGGTGCGAACAATAT 58.449 47.619 0.00 0.00 0.00 1.28
436 443 1.577468 TACCATCCACGCGCTTATTG 58.423 50.000 5.73 0.00 0.00 1.90
441 448 0.108089 TCCACGCGCTTATTGGCTAA 60.108 50.000 5.73 0.00 0.00 3.09
456 467 3.417101 TGGCTAAAAGAAGAATGGCGAA 58.583 40.909 0.00 0.00 0.00 4.70
470 481 0.654683 GGCGAACTTAGCTGCATCTG 59.345 55.000 1.02 0.00 34.52 2.90
477 490 3.030291 ACTTAGCTGCATCTGAGCTACT 58.970 45.455 9.08 0.00 46.37 2.57
485 498 5.107143 GCTGCATCTGAGCTACTTTATAAGC 60.107 44.000 0.00 0.00 39.08 3.09
489 502 5.830000 TCTGAGCTACTTTATAAGCGTGA 57.170 39.130 0.00 0.00 43.63 4.35
490 503 6.392625 TCTGAGCTACTTTATAAGCGTGAT 57.607 37.500 0.00 0.00 43.63 3.06
503 516 3.062323 AGCGTGATAGCTTACGTACAC 57.938 47.619 15.89 0.00 46.80 2.90
504 517 2.681848 AGCGTGATAGCTTACGTACACT 59.318 45.455 15.89 0.00 46.80 3.55
505 518 3.034562 GCGTGATAGCTTACGTACACTC 58.965 50.000 15.89 0.00 41.98 3.51
506 519 3.615614 CGTGATAGCTTACGTACACTCC 58.384 50.000 0.00 0.00 35.70 3.85
507 520 3.064408 CGTGATAGCTTACGTACACTCCA 59.936 47.826 0.00 0.00 35.70 3.86
508 521 4.261072 CGTGATAGCTTACGTACACTCCAT 60.261 45.833 0.00 0.00 35.70 3.41
509 522 5.589192 GTGATAGCTTACGTACACTCCATT 58.411 41.667 0.00 0.00 0.00 3.16
510 523 5.686397 GTGATAGCTTACGTACACTCCATTC 59.314 44.000 0.00 0.00 0.00 2.67
511 524 3.521947 AGCTTACGTACACTCCATTCC 57.478 47.619 0.00 0.00 0.00 3.01
512 525 2.829720 AGCTTACGTACACTCCATTCCA 59.170 45.455 0.00 0.00 0.00 3.53
513 526 3.259876 AGCTTACGTACACTCCATTCCAA 59.740 43.478 0.00 0.00 0.00 3.53
514 527 3.998341 GCTTACGTACACTCCATTCCAAA 59.002 43.478 0.00 0.00 0.00 3.28
515 528 4.634443 GCTTACGTACACTCCATTCCAAAT 59.366 41.667 0.00 0.00 0.00 2.32
516 529 5.123344 GCTTACGTACACTCCATTCCAAATT 59.877 40.000 0.00 0.00 0.00 1.82
517 530 6.314400 GCTTACGTACACTCCATTCCAAATTA 59.686 38.462 0.00 0.00 0.00 1.40
518 531 7.599630 TTACGTACACTCCATTCCAAATTAC 57.400 36.000 0.00 0.00 0.00 1.89
519 532 5.801380 ACGTACACTCCATTCCAAATTACT 58.199 37.500 0.00 0.00 0.00 2.24
520 533 6.235664 ACGTACACTCCATTCCAAATTACTT 58.764 36.000 0.00 0.00 0.00 2.24
521 534 6.148811 ACGTACACTCCATTCCAAATTACTTG 59.851 38.462 0.00 0.00 34.52 3.16
522 535 6.148811 CGTACACTCCATTCCAAATTACTTGT 59.851 38.462 0.00 0.00 32.65 3.16
523 536 6.976934 ACACTCCATTCCAAATTACTTGTT 57.023 33.333 0.00 0.00 32.65 2.83
524 537 6.748132 ACACTCCATTCCAAATTACTTGTTG 58.252 36.000 0.00 0.00 32.65 3.33
525 538 5.634859 CACTCCATTCCAAATTACTTGTTGC 59.365 40.000 0.00 0.00 32.65 4.17
526 539 5.304101 ACTCCATTCCAAATTACTTGTTGCA 59.696 36.000 0.00 0.00 32.65 4.08
527 540 5.537188 TCCATTCCAAATTACTTGTTGCAC 58.463 37.500 0.00 0.00 32.65 4.57
528 541 5.069648 TCCATTCCAAATTACTTGTTGCACA 59.930 36.000 0.00 0.00 32.65 4.57
529 542 5.933463 CCATTCCAAATTACTTGTTGCACAT 59.067 36.000 0.00 0.00 32.65 3.21
530 543 7.039434 TCCATTCCAAATTACTTGTTGCACATA 60.039 33.333 0.00 0.00 32.65 2.29
531 544 7.765360 CCATTCCAAATTACTTGTTGCACATAT 59.235 33.333 0.00 0.00 32.65 1.78
532 545 8.597227 CATTCCAAATTACTTGTTGCACATATG 58.403 33.333 0.00 0.00 32.65 1.78
533 546 7.459795 TCCAAATTACTTGTTGCACATATGA 57.540 32.000 10.38 0.00 32.65 2.15
534 547 7.890515 TCCAAATTACTTGTTGCACATATGAA 58.109 30.769 10.38 0.00 32.65 2.57
535 548 8.530311 TCCAAATTACTTGTTGCACATATGAAT 58.470 29.630 10.38 0.00 32.65 2.57
536 549 8.597227 CCAAATTACTTGTTGCACATATGAATG 58.403 33.333 10.38 0.00 34.73 2.67
541 554 7.870509 ACTTGTTGCACATATGAATGTATCT 57.129 32.000 10.38 0.00 44.70 1.98
542 555 8.962884 ACTTGTTGCACATATGAATGTATCTA 57.037 30.769 10.38 0.00 44.70 1.98
543 556 9.049523 ACTTGTTGCACATATGAATGTATCTAG 57.950 33.333 10.38 6.16 44.70 2.43
544 557 9.264719 CTTGTTGCACATATGAATGTATCTAGA 57.735 33.333 10.38 0.00 44.70 2.43
545 558 9.783081 TTGTTGCACATATGAATGTATCTAGAT 57.217 29.630 10.38 10.73 44.70 1.98
546 559 9.211485 TGTTGCACATATGAATGTATCTAGATG 57.789 33.333 15.79 0.00 44.70 2.90
547 560 9.212641 GTTGCACATATGAATGTATCTAGATGT 57.787 33.333 15.79 0.00 44.70 3.06
599 612 8.970859 AGTGATGAGTAATTTGAAATAGAGGG 57.029 34.615 0.00 0.00 0.00 4.30
600 613 8.772250 AGTGATGAGTAATTTGAAATAGAGGGA 58.228 33.333 0.00 0.00 0.00 4.20
601 614 9.396022 GTGATGAGTAATTTGAAATAGAGGGAA 57.604 33.333 0.00 0.00 0.00 3.97
642 655 7.326454 AGCGGATCTTAGTACTATATCACGTA 58.674 38.462 19.63 0.00 0.00 3.57
645 658 8.593842 CGGATCTTAGTACTATATCACGTACTG 58.406 40.741 19.63 6.71 44.28 2.74
656 669 3.503827 TCACGTACTGCCAGATAACAG 57.496 47.619 0.00 0.00 39.86 3.16
658 671 2.923655 CACGTACTGCCAGATAACAGTG 59.076 50.000 0.00 3.63 46.31 3.66
665 678 2.290197 TGCCAGATAACAGTGATGCACA 60.290 45.455 0.00 0.00 36.74 4.57
694 707 2.223665 GCCAGCCAAATATCTTGCACTC 60.224 50.000 0.00 0.00 0.00 3.51
696 709 2.032550 CAGCCAAATATCTTGCACTCGG 59.967 50.000 0.00 0.00 0.00 4.63
698 711 2.032178 GCCAAATATCTTGCACTCGGAC 59.968 50.000 0.00 0.00 0.00 4.79
786 803 2.177580 CCGGTGCTCGTTTGTGTGT 61.178 57.895 0.00 0.00 37.11 3.72
926 962 8.929746 CATTTCTCCTCCAAAAATAAAAGAAGC 58.070 33.333 0.00 0.00 0.00 3.86
931 967 7.466804 TCCTCCAAAAATAAAAGAAGCTCCTA 58.533 34.615 0.00 0.00 0.00 2.94
1161 1199 0.537371 ACAGTAAGCAACCCTGTGCC 60.537 55.000 0.00 0.00 46.14 5.01
1191 1229 3.181478 TGCAGATGATCTAGCTGTGTCTG 60.181 47.826 14.65 2.93 44.58 3.51
1192 1230 3.181477 GCAGATGATCTAGCTGTGTCTGT 60.181 47.826 0.00 0.00 44.58 3.41
1193 1231 4.609947 CAGATGATCTAGCTGTGTCTGTC 58.390 47.826 0.00 0.00 38.01 3.51
1194 1232 4.338964 CAGATGATCTAGCTGTGTCTGTCT 59.661 45.833 0.00 0.00 38.01 3.41
1195 1233 4.955450 AGATGATCTAGCTGTGTCTGTCTT 59.045 41.667 0.00 0.00 0.00 3.01
1196 1234 4.446994 TGATCTAGCTGTGTCTGTCTTG 57.553 45.455 0.00 0.00 0.00 3.02
1197 1235 3.829026 TGATCTAGCTGTGTCTGTCTTGT 59.171 43.478 0.00 0.00 0.00 3.16
1309 1366 2.034507 GCAATTCATCGCGTCAGTAGAC 60.035 50.000 5.77 0.00 41.46 2.59
1409 1479 1.199327 CGTACGTGATGCCGGATCTAT 59.801 52.381 5.05 0.00 31.55 1.98
1622 1692 2.125106 ATGTTCTTCGCCGGCTCC 60.125 61.111 26.68 5.91 0.00 4.70
1819 1889 7.115663 GTCTTCATCTAATTGATCTTACGGCTC 59.884 40.741 0.00 0.00 32.05 4.70
1825 1895 9.950496 ATCTAATTGATCTTACGGCTCAATTAT 57.050 29.630 14.10 3.73 44.52 1.28
2049 2158 2.125952 GTACGTACGTGGGGTGGC 60.126 66.667 30.25 8.02 0.00 5.01
2098 2221 7.698506 TTCAAAGATGATTGCTGAGAAAGAT 57.301 32.000 0.00 0.00 34.96 2.40
2107 2230 6.985059 TGATTGCTGAGAAAGATAGAGTGATG 59.015 38.462 0.00 0.00 0.00 3.07
2109 2232 6.535963 TGCTGAGAAAGATAGAGTGATGAA 57.464 37.500 0.00 0.00 0.00 2.57
2166 2306 4.482386 TCATTGAGACGACTTTAGTTCGG 58.518 43.478 0.00 0.00 0.00 4.30
2249 2395 0.469331 ATGCGGGAGGGATCGAACTA 60.469 55.000 0.00 0.00 0.00 2.24
2250 2396 0.469331 TGCGGGAGGGATCGAACTAT 60.469 55.000 0.00 0.00 0.00 2.12
2276 2422 6.856426 TCTGATGTAACGCAGAGTTATTATCG 59.144 38.462 0.00 5.44 45.90 2.92
2277 2423 6.500910 TGATGTAACGCAGAGTTATTATCGT 58.499 36.000 0.00 0.00 45.90 3.73
2345 2491 2.953020 TGCACCGCAAATTATTGTTCC 58.047 42.857 0.00 0.00 38.85 3.62
2421 2572 9.836864 AAGCAAATGTACAATCTATCTATCACA 57.163 29.630 0.00 0.00 0.00 3.58
2438 2589 8.072321 TCTATCACAATCTATCTATCCCTTGC 57.928 38.462 0.00 0.00 0.00 4.01
2439 2590 6.949117 ATCACAATCTATCTATCCCTTGCT 57.051 37.500 0.00 0.00 0.00 3.91
2440 2591 6.753913 TCACAATCTATCTATCCCTTGCTT 57.246 37.500 0.00 0.00 0.00 3.91
2441 2592 6.763355 TCACAATCTATCTATCCCTTGCTTC 58.237 40.000 0.00 0.00 0.00 3.86
2442 2593 5.936956 CACAATCTATCTATCCCTTGCTTCC 59.063 44.000 0.00 0.00 0.00 3.46
2443 2594 5.174395 CAATCTATCTATCCCTTGCTTCCG 58.826 45.833 0.00 0.00 0.00 4.30
2444 2595 4.114015 TCTATCTATCCCTTGCTTCCGA 57.886 45.455 0.00 0.00 0.00 4.55
2445 2596 3.827302 TCTATCTATCCCTTGCTTCCGAC 59.173 47.826 0.00 0.00 0.00 4.79
2465 2645 1.017387 GAATGCCTGGATGGTTCGAC 58.983 55.000 0.00 0.00 38.35 4.20
2520 2700 2.407428 GCTTTCCCGGTTAGCAGGC 61.407 63.158 13.07 0.00 35.05 4.85
2573 2757 3.955101 CTCGCCGTCTAGCTCCCG 61.955 72.222 0.00 0.00 0.00 5.14
2578 2762 1.732308 CCGTCTAGCTCCCGTTACC 59.268 63.158 0.00 0.00 0.00 2.85
2580 2764 0.813184 CGTCTAGCTCCCGTTACCAA 59.187 55.000 0.00 0.00 0.00 3.67
2619 2803 3.770666 TCATCGAGATCGTGAGGAAAAC 58.229 45.455 1.70 0.00 40.80 2.43
2621 2805 2.942710 TCGAGATCGTGAGGAAAACAC 58.057 47.619 1.70 0.00 40.80 3.32
2623 2807 2.408704 CGAGATCGTGAGGAAAACACAC 59.591 50.000 0.00 0.00 38.04 3.82
2627 2811 2.821546 TCGTGAGGAAAACACACTGAG 58.178 47.619 0.00 0.00 38.36 3.35
2764 2956 7.054124 AGTAATTTCGATGGGTCAATACATGT 58.946 34.615 2.69 2.69 0.00 3.21
2774 2966 8.593945 ATGGGTCAATACATGTTGTCTTATTT 57.406 30.769 2.30 0.00 0.00 1.40
3314 3506 2.990479 GGTGCCACGATCCTCCTT 59.010 61.111 0.00 0.00 0.00 3.36
3434 3626 2.017782 TCTCTACTCGTGCTAGGCTTG 58.982 52.381 0.00 0.00 0.00 4.01
3659 3851 4.796495 GCCGTGGTGGGGATGACC 62.796 72.222 0.00 0.00 38.63 4.02
3794 3986 1.152567 CCTCGAGGAGATGGAGGCT 60.153 63.158 28.21 0.00 45.65 4.58
3915 4107 6.657836 ATTCTTACCGGTAAAGAATTGTCG 57.342 37.500 28.07 16.84 0.00 4.35
3981 4173 0.179073 CCGGCATCCCTAGTGACAAG 60.179 60.000 0.00 0.00 0.00 3.16
4039 4231 6.457528 GCACTGTCCAACTAAGATTGCTATTC 60.458 42.308 0.00 0.00 0.00 1.75
4050 4242 8.589338 ACTAAGATTGCTATTCACCCTATACAG 58.411 37.037 0.00 0.00 0.00 2.74
4055 4247 6.346477 TGCTATTCACCCTATACAGTGATC 57.654 41.667 0.00 0.00 42.32 2.92
4134 4326 8.197439 TGCAGTATCGGTGATATTATCAATAGG 58.803 37.037 7.93 0.00 41.69 2.57
4154 4346 5.422214 AGGGAGTGAAATTCGTCATTAGT 57.578 39.130 0.00 0.00 0.00 2.24
4212 4406 9.092876 AGAAAGCTTAAGAAGTGATCGATTTAG 57.907 33.333 6.67 0.00 0.00 1.85
4230 4424 7.170320 TCGATTTAGGCCATAAACTCGTTTATC 59.830 37.037 18.15 3.36 42.11 1.75
4264 4458 4.253685 CAGCCTAAACTGATTTCGAAGGA 58.746 43.478 0.00 0.00 40.25 3.36
4265 4459 4.695455 CAGCCTAAACTGATTTCGAAGGAA 59.305 41.667 0.00 0.00 40.25 3.36
4304 4498 3.495670 TGACAACCAAAACTTTGACCG 57.504 42.857 3.72 0.00 40.55 4.79
4307 4501 2.232696 ACAACCAAAACTTTGACCGCTT 59.767 40.909 3.72 0.00 40.55 4.68
4316 4510 0.821711 TTTGACCGCTTGGGAACTGG 60.822 55.000 0.00 0.00 39.97 4.00
4320 4514 2.335712 CCGCTTGGGAACTGGCTTC 61.336 63.158 0.00 0.00 38.47 3.86
4327 4521 3.586470 TGGGAACTGGCTTCTTTTACA 57.414 42.857 0.00 0.00 0.00 2.41
4328 4522 3.486383 TGGGAACTGGCTTCTTTTACAG 58.514 45.455 0.00 0.00 37.01 2.74
4331 4525 4.505039 GGGAACTGGCTTCTTTTACAGAGA 60.505 45.833 0.00 0.00 35.08 3.10
4333 4527 5.511545 GGAACTGGCTTCTTTTACAGAGAGA 60.512 44.000 0.00 0.00 35.08 3.10
4338 4532 7.503902 ACTGGCTTCTTTTACAGAGAGATTTTT 59.496 33.333 0.00 0.00 35.08 1.94
4384 4897 6.375455 ACAAGCTAAACTAATGTCATTGGAGG 59.625 38.462 15.18 2.85 0.00 4.30
4428 4941 0.324943 CTCGATCCCACACCTTTGGT 59.675 55.000 0.00 0.00 34.44 3.67
4435 4948 1.507141 CCACACCTTTGGTCGTGAGC 61.507 60.000 15.57 0.00 37.10 4.26
4436 4949 1.227853 ACACCTTTGGTCGTGAGCC 60.228 57.895 0.00 0.00 31.02 4.70
4437 4950 2.030562 ACCTTTGGTCGTGAGCCG 59.969 61.111 0.00 0.00 38.13 5.52
4451 4966 2.232298 GAGCCGGCTTGCTAGACACT 62.232 60.000 33.34 2.41 42.95 3.55
4456 4971 1.746220 CGGCTTGCTAGACACTAGAGT 59.254 52.381 0.96 0.00 0.00 3.24
4468 4983 6.377245 AGACACTAGAGTAGTAAGTGGTCT 57.623 41.667 14.12 11.51 43.91 3.85
4481 4996 2.443416 AGTGGTCTGCGTACATACTGA 58.557 47.619 0.00 0.00 0.00 3.41
4482 4997 3.024547 AGTGGTCTGCGTACATACTGAT 58.975 45.455 0.00 0.00 0.00 2.90
4483 4998 4.204799 AGTGGTCTGCGTACATACTGATA 58.795 43.478 0.00 0.00 0.00 2.15
4484 4999 4.036498 AGTGGTCTGCGTACATACTGATAC 59.964 45.833 0.00 0.00 0.00 2.24
4485 5000 4.036498 GTGGTCTGCGTACATACTGATACT 59.964 45.833 0.00 0.00 0.00 2.12
4486 5001 4.036380 TGGTCTGCGTACATACTGATACTG 59.964 45.833 0.00 0.00 0.00 2.74
4487 5002 4.036498 GGTCTGCGTACATACTGATACTGT 59.964 45.833 0.00 0.00 0.00 3.55
4488 5003 5.206299 GTCTGCGTACATACTGATACTGTC 58.794 45.833 0.00 0.00 0.00 3.51
4489 5004 4.879545 TCTGCGTACATACTGATACTGTCA 59.120 41.667 0.00 0.00 35.05 3.58
4490 5005 4.916870 TGCGTACATACTGATACTGTCAC 58.083 43.478 0.00 0.00 32.22 3.67
4491 5006 3.966844 GCGTACATACTGATACTGTCACG 59.033 47.826 0.00 0.00 32.22 4.35
4492 5007 3.966844 CGTACATACTGATACTGTCACGC 59.033 47.826 0.00 0.00 32.22 5.34
4493 5008 4.260661 CGTACATACTGATACTGTCACGCT 60.261 45.833 0.00 0.00 32.22 5.07
4494 5009 5.050567 CGTACATACTGATACTGTCACGCTA 60.051 44.000 0.00 0.00 32.22 4.26
4495 5010 5.830000 ACATACTGATACTGTCACGCTAA 57.170 39.130 0.00 0.00 32.22 3.09
4496 5011 6.392625 ACATACTGATACTGTCACGCTAAT 57.607 37.500 0.00 0.00 32.22 1.73
4497 5012 6.806751 ACATACTGATACTGTCACGCTAATT 58.193 36.000 0.00 0.00 32.22 1.40
4498 5013 7.265673 ACATACTGATACTGTCACGCTAATTT 58.734 34.615 0.00 0.00 32.22 1.82
4499 5014 8.410912 ACATACTGATACTGTCACGCTAATTTA 58.589 33.333 0.00 0.00 32.22 1.40
4500 5015 8.691727 CATACTGATACTGTCACGCTAATTTAC 58.308 37.037 0.00 0.00 32.22 2.01
4501 5016 6.627243 ACTGATACTGTCACGCTAATTTACA 58.373 36.000 0.00 0.00 32.22 2.41
4502 5017 7.265673 ACTGATACTGTCACGCTAATTTACAT 58.734 34.615 0.00 0.00 32.22 2.29
4503 5018 7.764443 ACTGATACTGTCACGCTAATTTACATT 59.236 33.333 0.00 0.00 32.22 2.71
4504 5019 8.487313 TGATACTGTCACGCTAATTTACATTT 57.513 30.769 0.00 0.00 0.00 2.32
4505 5020 8.387354 TGATACTGTCACGCTAATTTACATTTG 58.613 33.333 0.00 0.00 0.00 2.32
4506 5021 6.554334 ACTGTCACGCTAATTTACATTTGT 57.446 33.333 0.00 0.00 0.00 2.83
4507 5022 6.370593 ACTGTCACGCTAATTTACATTTGTG 58.629 36.000 0.00 0.00 33.40 3.33
4508 5023 6.017440 ACTGTCACGCTAATTTACATTTGTGT 60.017 34.615 0.00 0.00 38.78 3.72
4513 5028 7.139896 ACGCTAATTTACATTTGTGTGATGA 57.860 32.000 2.20 0.00 37.43 2.92
4514 5029 7.589395 ACGCTAATTTACATTTGTGTGATGAA 58.411 30.769 2.20 0.00 37.43 2.57
4515 5030 8.243426 ACGCTAATTTACATTTGTGTGATGAAT 58.757 29.630 2.20 0.00 37.43 2.57
4516 5031 8.736742 CGCTAATTTACATTTGTGTGATGAATC 58.263 33.333 0.00 0.00 0.00 2.52
4517 5032 9.571810 GCTAATTTACATTTGTGTGATGAATCA 57.428 29.630 0.00 0.00 0.00 2.57
4521 5036 9.932207 ATTTACATTTGTGTGATGAATCAATGT 57.068 25.926 10.70 10.70 38.75 2.71
4525 5040 9.361315 ACATTTGTGTGATGAATCAATGTAATG 57.639 29.630 5.98 9.92 38.75 1.90
4526 5041 9.575783 CATTTGTGTGATGAATCAATGTAATGA 57.424 29.630 0.00 0.00 38.75 2.57
4528 5043 8.969121 TTGTGTGATGAATCAATGTAATGAAC 57.031 30.769 0.00 0.00 38.75 3.18
4529 5044 8.108551 TGTGTGATGAATCAATGTAATGAACA 57.891 30.769 0.00 0.00 43.86 3.18
4530 5045 8.574737 TGTGTGATGAATCAATGTAATGAACAA 58.425 29.630 0.00 0.00 42.70 2.83
4531 5046 9.577110 GTGTGATGAATCAATGTAATGAACAAT 57.423 29.630 0.00 0.00 42.70 2.71
4545 5060 9.979578 TGTAATGAACAATAAACTGATTGCTTT 57.020 25.926 0.00 0.00 39.94 3.51
4557 5072 8.593945 AAACTGATTGCTTTATTGATAAGGGA 57.406 30.769 0.00 0.00 0.00 4.20
4558 5073 8.773033 AACTGATTGCTTTATTGATAAGGGAT 57.227 30.769 0.00 0.00 0.00 3.85
4559 5074 8.773033 ACTGATTGCTTTATTGATAAGGGATT 57.227 30.769 0.00 0.00 0.00 3.01
4560 5075 9.866655 ACTGATTGCTTTATTGATAAGGGATTA 57.133 29.630 0.00 0.00 0.00 1.75
4562 5077 9.639563 TGATTGCTTTATTGATAAGGGATTACA 57.360 29.630 0.00 0.00 0.00 2.41
4565 5080 8.995027 TGCTTTATTGATAAGGGATTACATGT 57.005 30.769 2.69 2.69 0.00 3.21
4570 5085 9.884636 TTATTGATAAGGGATTACATGTATCGG 57.115 33.333 6.36 0.00 0.00 4.18
4571 5086 6.294361 TGATAAGGGATTACATGTATCGGG 57.706 41.667 6.36 0.00 0.00 5.14
4572 5087 5.188948 TGATAAGGGATTACATGTATCGGGG 59.811 44.000 6.36 0.00 0.00 5.73
4573 5088 3.269592 AGGGATTACATGTATCGGGGA 57.730 47.619 6.36 0.00 0.00 4.81
4574 5089 3.173965 AGGGATTACATGTATCGGGGAG 58.826 50.000 6.36 0.00 0.00 4.30
4575 5090 3.170717 GGGATTACATGTATCGGGGAGA 58.829 50.000 6.36 0.00 0.00 3.71
4576 5091 3.056035 GGGATTACATGTATCGGGGAGAC 60.056 52.174 6.36 0.00 0.00 3.36
4577 5092 3.367087 GGATTACATGTATCGGGGAGACG 60.367 52.174 6.36 0.00 0.00 4.18
4578 5093 2.353357 TACATGTATCGGGGAGACGT 57.647 50.000 0.08 0.00 34.94 4.34
4579 5094 2.353357 ACATGTATCGGGGAGACGTA 57.647 50.000 0.00 0.00 34.94 3.57
4580 5095 2.872732 ACATGTATCGGGGAGACGTAT 58.127 47.619 0.00 0.00 34.94 3.06
4581 5096 2.818432 ACATGTATCGGGGAGACGTATC 59.182 50.000 0.37 0.37 34.94 2.24
4582 5097 1.516161 TGTATCGGGGAGACGTATCG 58.484 55.000 3.77 0.00 34.94 2.92
4583 5098 1.070601 TGTATCGGGGAGACGTATCGA 59.929 52.381 3.77 0.00 34.94 3.59
4584 5099 2.146342 GTATCGGGGAGACGTATCGAA 58.854 52.381 3.77 0.00 33.53 3.71
4585 5100 0.950116 ATCGGGGAGACGTATCGAAC 59.050 55.000 3.77 0.00 33.53 3.95
4586 5101 0.392863 TCGGGGAGACGTATCGAACA 60.393 55.000 3.77 0.00 34.94 3.18
4587 5102 0.452987 CGGGGAGACGTATCGAACAA 59.547 55.000 3.77 0.00 0.00 2.83
4588 5103 1.533338 CGGGGAGACGTATCGAACAAG 60.533 57.143 3.77 0.00 0.00 3.16
4589 5104 1.747355 GGGGAGACGTATCGAACAAGA 59.253 52.381 3.77 0.00 0.00 3.02
4590 5105 2.165030 GGGGAGACGTATCGAACAAGAA 59.835 50.000 3.77 0.00 0.00 2.52
4591 5106 3.177487 GGGAGACGTATCGAACAAGAAC 58.823 50.000 3.77 0.00 0.00 3.01
4592 5107 2.844804 GGAGACGTATCGAACAAGAACG 59.155 50.000 3.77 0.00 39.37 3.95
4595 5110 3.272439 ACGTATCGAACAAGAACGTCA 57.728 42.857 0.00 0.00 42.62 4.35
4596 5111 3.631144 ACGTATCGAACAAGAACGTCAA 58.369 40.909 0.00 0.00 42.62 3.18
4597 5112 4.232221 ACGTATCGAACAAGAACGTCAAT 58.768 39.130 0.00 0.00 42.62 2.57
4598 5113 4.682860 ACGTATCGAACAAGAACGTCAATT 59.317 37.500 0.00 0.00 42.62 2.32
4599 5114 5.007039 CGTATCGAACAAGAACGTCAATTG 58.993 41.667 0.00 0.00 0.00 2.32
4600 5115 3.247563 TCGAACAAGAACGTCAATTGC 57.752 42.857 0.00 0.00 0.00 3.56
4601 5116 2.032377 TCGAACAAGAACGTCAATTGCC 60.032 45.455 0.00 0.00 0.00 4.52
4602 5117 2.307049 GAACAAGAACGTCAATTGCCG 58.693 47.619 7.43 7.43 0.00 5.69
4603 5118 1.588674 ACAAGAACGTCAATTGCCGA 58.411 45.000 16.71 0.00 0.00 5.54
4604 5119 1.944024 ACAAGAACGTCAATTGCCGAA 59.056 42.857 16.71 0.00 0.00 4.30
4605 5120 2.356382 ACAAGAACGTCAATTGCCGAAA 59.644 40.909 16.71 0.00 0.00 3.46
4606 5121 2.969443 AGAACGTCAATTGCCGAAAG 57.031 45.000 16.71 0.00 0.00 2.62
4607 5122 2.489971 AGAACGTCAATTGCCGAAAGA 58.510 42.857 16.71 0.00 0.00 2.52
4608 5123 2.875933 AGAACGTCAATTGCCGAAAGAA 59.124 40.909 16.71 0.00 0.00 2.52
4609 5124 3.502211 AGAACGTCAATTGCCGAAAGAAT 59.498 39.130 16.71 0.00 0.00 2.40
4610 5125 4.693566 AGAACGTCAATTGCCGAAAGAATA 59.306 37.500 16.71 0.00 0.00 1.75
4611 5126 4.600012 ACGTCAATTGCCGAAAGAATAG 57.400 40.909 16.71 0.00 0.00 1.73
4612 5127 4.000988 ACGTCAATTGCCGAAAGAATAGT 58.999 39.130 16.71 0.00 0.00 2.12
4613 5128 5.172934 ACGTCAATTGCCGAAAGAATAGTA 58.827 37.500 16.71 0.00 0.00 1.82
4614 5129 5.291128 ACGTCAATTGCCGAAAGAATAGTAG 59.709 40.000 16.71 0.00 0.00 2.57
4615 5130 5.276868 CGTCAATTGCCGAAAGAATAGTAGG 60.277 44.000 1.99 0.00 0.00 3.18
4616 5131 5.007724 GTCAATTGCCGAAAGAATAGTAGGG 59.992 44.000 0.00 0.00 0.00 3.53
4617 5132 3.553828 TTGCCGAAAGAATAGTAGGGG 57.446 47.619 0.00 0.00 0.00 4.79
4618 5133 2.754465 TGCCGAAAGAATAGTAGGGGA 58.246 47.619 0.00 0.00 0.00 4.81
4619 5134 3.314693 TGCCGAAAGAATAGTAGGGGAT 58.685 45.455 0.00 0.00 0.00 3.85
4620 5135 3.071023 TGCCGAAAGAATAGTAGGGGATG 59.929 47.826 0.00 0.00 0.00 3.51
4621 5136 3.071167 GCCGAAAGAATAGTAGGGGATGT 59.929 47.826 0.00 0.00 0.00 3.06
4622 5137 4.632153 CCGAAAGAATAGTAGGGGATGTG 58.368 47.826 0.00 0.00 0.00 3.21
4623 5138 4.101119 CCGAAAGAATAGTAGGGGATGTGT 59.899 45.833 0.00 0.00 0.00 3.72
4624 5139 5.303589 CCGAAAGAATAGTAGGGGATGTGTA 59.696 44.000 0.00 0.00 0.00 2.90
4625 5140 6.214399 CGAAAGAATAGTAGGGGATGTGTAC 58.786 44.000 0.00 0.00 0.00 2.90
4626 5141 6.183360 CGAAAGAATAGTAGGGGATGTGTACA 60.183 42.308 0.00 0.00 0.00 2.90
4627 5142 6.732896 AAGAATAGTAGGGGATGTGTACAG 57.267 41.667 0.00 0.00 0.00 2.74
4628 5143 5.148502 AGAATAGTAGGGGATGTGTACAGG 58.851 45.833 0.00 0.00 0.00 4.00
4629 5144 4.827036 ATAGTAGGGGATGTGTACAGGA 57.173 45.455 0.00 0.00 0.00 3.86
4630 5145 3.484953 AGTAGGGGATGTGTACAGGAA 57.515 47.619 0.00 0.00 0.00 3.36
4631 5146 3.105283 AGTAGGGGATGTGTACAGGAAC 58.895 50.000 0.00 0.00 0.00 3.62
4632 5147 2.038863 AGGGGATGTGTACAGGAACA 57.961 50.000 0.00 0.00 0.00 3.18
4633 5148 2.344592 AGGGGATGTGTACAGGAACAA 58.655 47.619 0.00 0.00 0.00 2.83
4634 5149 2.039879 AGGGGATGTGTACAGGAACAAC 59.960 50.000 0.00 0.00 0.00 3.32
4635 5150 2.224670 GGGGATGTGTACAGGAACAACA 60.225 50.000 0.00 0.00 0.00 3.33
4636 5151 2.812011 GGGATGTGTACAGGAACAACAC 59.188 50.000 0.00 0.00 43.00 3.32
4637 5152 2.478894 GGATGTGTACAGGAACAACACG 59.521 50.000 0.00 0.00 45.09 4.49
4638 5153 2.676632 TGTGTACAGGAACAACACGT 57.323 45.000 0.00 0.00 45.09 4.49
4639 5154 2.542597 TGTGTACAGGAACAACACGTC 58.457 47.619 0.00 0.00 45.09 4.34
4640 5155 1.519758 GTGTACAGGAACAACACGTCG 59.480 52.381 0.00 0.00 34.72 5.12
4641 5156 1.134226 GTACAGGAACAACACGTCGG 58.866 55.000 0.00 0.00 0.00 4.79
4642 5157 0.746063 TACAGGAACAACACGTCGGT 59.254 50.000 0.00 0.00 0.00 4.69
4643 5158 0.108041 ACAGGAACAACACGTCGGTT 60.108 50.000 0.00 0.00 0.00 4.44
4644 5159 1.136695 ACAGGAACAACACGTCGGTTA 59.863 47.619 0.00 0.00 0.00 2.85
4645 5160 1.523934 CAGGAACAACACGTCGGTTAC 59.476 52.381 0.00 0.00 0.00 2.50
4646 5161 1.136695 AGGAACAACACGTCGGTTACA 59.863 47.619 8.07 0.00 0.00 2.41
4647 5162 1.932511 GGAACAACACGTCGGTTACAA 59.067 47.619 0.00 0.00 0.00 2.41
4648 5163 2.033492 GGAACAACACGTCGGTTACAAG 60.033 50.000 0.00 0.00 0.00 3.16
4649 5164 2.298411 ACAACACGTCGGTTACAAGT 57.702 45.000 0.00 0.00 0.00 3.16
4650 5165 1.928503 ACAACACGTCGGTTACAAGTG 59.071 47.619 0.00 0.00 38.63 3.16
4651 5166 1.928503 CAACACGTCGGTTACAAGTGT 59.071 47.619 0.00 0.00 46.46 3.55
4652 5167 3.114809 CAACACGTCGGTTACAAGTGTA 58.885 45.455 0.00 0.00 44.13 2.90
4653 5168 3.004024 ACACGTCGGTTACAAGTGTAG 57.996 47.619 0.00 0.00 43.24 2.74
4654 5169 2.618241 ACACGTCGGTTACAAGTGTAGA 59.382 45.455 0.00 0.00 43.24 2.59
4655 5170 3.254166 ACACGTCGGTTACAAGTGTAGAT 59.746 43.478 0.00 0.00 43.24 1.98
4656 5171 4.232221 CACGTCGGTTACAAGTGTAGATT 58.768 43.478 0.00 0.00 0.00 2.40
4657 5172 4.682860 CACGTCGGTTACAAGTGTAGATTT 59.317 41.667 0.00 0.00 0.00 2.17
4658 5173 4.919754 ACGTCGGTTACAAGTGTAGATTTC 59.080 41.667 0.00 0.00 0.00 2.17
4659 5174 4.325472 CGTCGGTTACAAGTGTAGATTTCC 59.675 45.833 0.00 0.00 0.00 3.13
4660 5175 5.476614 GTCGGTTACAAGTGTAGATTTCCT 58.523 41.667 0.00 0.00 0.00 3.36
4661 5176 5.930569 GTCGGTTACAAGTGTAGATTTCCTT 59.069 40.000 0.00 0.00 0.00 3.36
4662 5177 7.092716 GTCGGTTACAAGTGTAGATTTCCTTA 58.907 38.462 0.00 0.00 0.00 2.69
4663 5178 7.599998 GTCGGTTACAAGTGTAGATTTCCTTAA 59.400 37.037 0.00 0.00 0.00 1.85
4664 5179 8.316214 TCGGTTACAAGTGTAGATTTCCTTAAT 58.684 33.333 0.00 0.00 0.00 1.40
4665 5180 8.943002 CGGTTACAAGTGTAGATTTCCTTAATT 58.057 33.333 0.00 0.00 0.00 1.40
4705 5220 9.783256 AAATATCAACACTTTCCTAATTTACGC 57.217 29.630 0.00 0.00 0.00 4.42
4706 5221 5.616488 TCAACACTTTCCTAATTTACGCC 57.384 39.130 0.00 0.00 0.00 5.68
4707 5222 5.310451 TCAACACTTTCCTAATTTACGCCT 58.690 37.500 0.00 0.00 0.00 5.52
4708 5223 5.180492 TCAACACTTTCCTAATTTACGCCTG 59.820 40.000 0.00 0.00 0.00 4.85
4709 5224 4.648651 ACACTTTCCTAATTTACGCCTGT 58.351 39.130 0.00 0.00 0.00 4.00
4710 5225 4.694037 ACACTTTCCTAATTTACGCCTGTC 59.306 41.667 0.00 0.00 0.00 3.51
4711 5226 4.094442 CACTTTCCTAATTTACGCCTGTCC 59.906 45.833 0.00 0.00 0.00 4.02
4712 5227 3.985019 TTCCTAATTTACGCCTGTCCA 57.015 42.857 0.00 0.00 0.00 4.02
4713 5228 4.497291 TTCCTAATTTACGCCTGTCCAT 57.503 40.909 0.00 0.00 0.00 3.41
4714 5229 3.804036 TCCTAATTTACGCCTGTCCATG 58.196 45.455 0.00 0.00 0.00 3.66
4715 5230 3.199071 TCCTAATTTACGCCTGTCCATGT 59.801 43.478 0.00 0.00 0.00 3.21
4716 5231 4.406326 TCCTAATTTACGCCTGTCCATGTA 59.594 41.667 0.00 0.00 0.00 2.29
4717 5232 5.104859 TCCTAATTTACGCCTGTCCATGTAA 60.105 40.000 0.00 0.00 0.00 2.41
4718 5233 4.957759 AATTTACGCCTGTCCATGTAAC 57.042 40.909 0.00 0.00 0.00 2.50
4719 5234 3.688694 TTTACGCCTGTCCATGTAACT 57.311 42.857 0.00 0.00 0.00 2.24
4720 5235 3.688694 TTACGCCTGTCCATGTAACTT 57.311 42.857 0.00 0.00 0.00 2.66
4721 5236 2.094762 ACGCCTGTCCATGTAACTTC 57.905 50.000 0.00 0.00 0.00 3.01
4722 5237 1.346395 ACGCCTGTCCATGTAACTTCA 59.654 47.619 0.00 0.00 0.00 3.02
4723 5238 2.027192 ACGCCTGTCCATGTAACTTCAT 60.027 45.455 0.00 0.00 0.00 2.57
4724 5239 2.609459 CGCCTGTCCATGTAACTTCATC 59.391 50.000 0.00 0.00 0.00 2.92
4725 5240 2.945668 GCCTGTCCATGTAACTTCATCC 59.054 50.000 0.00 0.00 0.00 3.51
4726 5241 3.370953 GCCTGTCCATGTAACTTCATCCT 60.371 47.826 0.00 0.00 0.00 3.24
4727 5242 4.848357 CCTGTCCATGTAACTTCATCCTT 58.152 43.478 0.00 0.00 0.00 3.36
4728 5243 4.878397 CCTGTCCATGTAACTTCATCCTTC 59.122 45.833 0.00 0.00 0.00 3.46
4729 5244 5.338708 CCTGTCCATGTAACTTCATCCTTCT 60.339 44.000 0.00 0.00 0.00 2.85
4730 5245 6.126863 TGTCCATGTAACTTCATCCTTCTT 57.873 37.500 0.00 0.00 0.00 2.52
4731 5246 6.542821 TGTCCATGTAACTTCATCCTTCTTT 58.457 36.000 0.00 0.00 0.00 2.52
4732 5247 7.685481 TGTCCATGTAACTTCATCCTTCTTTA 58.315 34.615 0.00 0.00 0.00 1.85
4733 5248 8.160765 TGTCCATGTAACTTCATCCTTCTTTAA 58.839 33.333 0.00 0.00 0.00 1.52
4734 5249 9.010029 GTCCATGTAACTTCATCCTTCTTTAAA 57.990 33.333 0.00 0.00 0.00 1.52
4735 5250 9.581289 TCCATGTAACTTCATCCTTCTTTAAAA 57.419 29.630 0.00 0.00 0.00 1.52
4736 5251 9.846248 CCATGTAACTTCATCCTTCTTTAAAAG 57.154 33.333 0.00 0.00 0.00 2.27
4759 5274 8.990163 AAGTATTTCTCCAAAAACCTTGTAGA 57.010 30.769 0.00 0.00 0.00 2.59
4760 5275 8.990163 AGTATTTCTCCAAAAACCTTGTAGAA 57.010 30.769 0.00 0.00 0.00 2.10
4761 5276 9.416284 AGTATTTCTCCAAAAACCTTGTAGAAA 57.584 29.630 7.43 7.43 36.32 2.52
4787 5302 9.517868 AAAAATGAGGAAATATGCCATGAAAAA 57.482 25.926 0.00 0.00 0.00 1.94
4809 5324 8.716646 AAAAATCATTTCAGAAAGGAAAACGT 57.283 26.923 13.96 0.00 39.94 3.99
4810 5325 8.716646 AAAATCATTTCAGAAAGGAAAACGTT 57.283 26.923 13.96 0.00 39.94 3.99
4811 5326 8.716646 AAATCATTTCAGAAAGGAAAACGTTT 57.283 26.923 13.96 7.96 39.94 3.60
4812 5327 7.698836 ATCATTTCAGAAAGGAAAACGTTTG 57.301 32.000 15.46 0.00 39.94 2.93
4813 5328 6.626302 TCATTTCAGAAAGGAAAACGTTTGT 58.374 32.000 15.46 4.87 39.94 2.83
4814 5329 6.750039 TCATTTCAGAAAGGAAAACGTTTGTC 59.250 34.615 15.46 13.35 39.94 3.18
4815 5330 4.267357 TCAGAAAGGAAAACGTTTGTCG 57.733 40.909 15.46 4.90 46.00 4.35
4816 5331 2.781646 CAGAAAGGAAAACGTTTGTCGC 59.218 45.455 15.46 4.72 44.19 5.19
4817 5332 2.114056 GAAAGGAAAACGTTTGTCGCC 58.886 47.619 15.46 13.36 44.19 5.54
4818 5333 0.028374 AAGGAAAACGTTTGTCGCCG 59.972 50.000 15.46 0.00 44.19 6.46
4819 5334 1.369568 GGAAAACGTTTGTCGCCGG 60.370 57.895 15.46 0.00 44.19 6.13
4820 5335 1.642753 GAAAACGTTTGTCGCCGGA 59.357 52.632 15.46 0.00 44.19 5.14
4821 5336 0.655337 GAAAACGTTTGTCGCCGGAC 60.655 55.000 15.46 0.00 44.19 4.79
4822 5337 2.364103 AAAACGTTTGTCGCCGGACG 62.364 55.000 15.46 7.77 46.49 4.79
4835 5350 2.342648 GGACGACCGGCTGAAACT 59.657 61.111 0.00 0.00 0.00 2.66
4836 5351 1.737008 GGACGACCGGCTGAAACTC 60.737 63.158 0.00 0.00 0.00 3.01
4837 5352 1.006571 GACGACCGGCTGAAACTCA 60.007 57.895 0.00 0.00 0.00 3.41
4838 5353 1.006102 ACGACCGGCTGAAACTCAG 60.006 57.895 0.00 0.00 46.90 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.427435 TTTTACGGGTCGGCTTTACG 58.573 50.000 0.00 0.00 0.00 3.18
86 87 0.596082 AAACAGATTTTGCGGGTCCG 59.404 50.000 4.85 4.85 43.09 4.79
87 88 2.403259 CAAAACAGATTTTGCGGGTCC 58.597 47.619 0.00 0.00 46.05 4.46
95 96 2.788786 CACTTCGCGCAAAACAGATTTT 59.211 40.909 8.75 0.00 38.61 1.82
96 97 2.384382 CACTTCGCGCAAAACAGATTT 58.616 42.857 8.75 0.00 0.00 2.17
97 98 1.925946 GCACTTCGCGCAAAACAGATT 60.926 47.619 8.75 0.00 0.00 2.40
98 99 0.385974 GCACTTCGCGCAAAACAGAT 60.386 50.000 8.75 0.00 0.00 2.90
99 100 1.010125 GCACTTCGCGCAAAACAGA 60.010 52.632 8.75 0.00 0.00 3.41
100 101 0.865218 TTGCACTTCGCGCAAAACAG 60.865 50.000 8.75 0.00 45.91 3.16
101 102 1.137614 TTGCACTTCGCGCAAAACA 59.862 47.368 8.75 0.00 45.91 2.83
102 103 3.990141 TTGCACTTCGCGCAAAAC 58.010 50.000 8.75 0.00 45.91 2.43
106 107 4.954680 GCGTTTGCACTTCGCGCA 62.955 61.111 8.75 0.00 46.97 6.09
109 110 0.996727 AAATCGCGTTTGCACTTCGC 60.997 50.000 5.77 16.01 45.28 4.70
110 111 0.697010 CAAATCGCGTTTGCACTTCG 59.303 50.000 16.97 0.00 40.62 3.79
136 137 4.864334 CAGACCCCGCATCCTGCC 62.864 72.222 0.00 0.00 41.12 4.85
138 139 2.374830 CTAGCAGACCCCGCATCCTG 62.375 65.000 0.00 0.00 0.00 3.86
139 140 2.041922 TAGCAGACCCCGCATCCT 60.042 61.111 0.00 0.00 0.00 3.24
140 141 2.093537 CTCTAGCAGACCCCGCATCC 62.094 65.000 0.00 0.00 0.00 3.51
141 142 1.365633 CTCTAGCAGACCCCGCATC 59.634 63.158 0.00 0.00 0.00 3.91
142 143 0.978146 AACTCTAGCAGACCCCGCAT 60.978 55.000 0.00 0.00 0.00 4.73
143 144 1.609501 AACTCTAGCAGACCCCGCA 60.610 57.895 0.00 0.00 0.00 5.69
144 145 1.153549 CAACTCTAGCAGACCCCGC 60.154 63.158 0.00 0.00 0.00 6.13
145 146 1.153549 GCAACTCTAGCAGACCCCG 60.154 63.158 0.00 0.00 0.00 5.73
146 147 0.615850 AAGCAACTCTAGCAGACCCC 59.384 55.000 0.00 0.00 0.00 4.95
147 148 2.481289 AAAGCAACTCTAGCAGACCC 57.519 50.000 0.00 0.00 0.00 4.46
148 149 4.152580 GTGTAAAAGCAACTCTAGCAGACC 59.847 45.833 0.00 0.00 0.00 3.85
149 150 4.750098 TGTGTAAAAGCAACTCTAGCAGAC 59.250 41.667 0.00 0.00 0.00 3.51
150 151 4.750098 GTGTGTAAAAGCAACTCTAGCAGA 59.250 41.667 0.00 0.00 0.00 4.26
151 152 4.083802 GGTGTGTAAAAGCAACTCTAGCAG 60.084 45.833 0.00 0.00 0.00 4.24
152 153 3.813166 GGTGTGTAAAAGCAACTCTAGCA 59.187 43.478 0.00 0.00 0.00 3.49
153 154 4.065789 AGGTGTGTAAAAGCAACTCTAGC 58.934 43.478 0.00 0.00 0.00 3.42
154 155 6.586844 GTCTAGGTGTGTAAAAGCAACTCTAG 59.413 42.308 0.00 0.00 34.17 2.43
155 156 6.453092 GTCTAGGTGTGTAAAAGCAACTCTA 58.547 40.000 0.00 0.00 34.17 2.43
156 157 5.298347 GTCTAGGTGTGTAAAAGCAACTCT 58.702 41.667 0.00 0.00 34.17 3.24
157 158 4.150098 CGTCTAGGTGTGTAAAAGCAACTC 59.850 45.833 0.00 0.00 34.17 3.01
158 159 4.056050 CGTCTAGGTGTGTAAAAGCAACT 58.944 43.478 0.00 0.00 36.51 3.16
159 160 3.185797 CCGTCTAGGTGTGTAAAAGCAAC 59.814 47.826 0.00 0.00 34.51 4.17
160 161 3.069872 TCCGTCTAGGTGTGTAAAAGCAA 59.930 43.478 0.00 0.00 41.99 3.91
161 162 2.629137 TCCGTCTAGGTGTGTAAAAGCA 59.371 45.455 0.00 0.00 41.99 3.91
162 163 3.251571 CTCCGTCTAGGTGTGTAAAAGC 58.748 50.000 0.00 0.00 41.99 3.51
163 164 3.368116 CCCTCCGTCTAGGTGTGTAAAAG 60.368 52.174 0.00 0.00 41.99 2.27
164 165 2.564062 CCCTCCGTCTAGGTGTGTAAAA 59.436 50.000 0.00 0.00 41.99 1.52
165 166 2.173519 CCCTCCGTCTAGGTGTGTAAA 58.826 52.381 0.00 0.00 41.99 2.01
166 167 1.355381 TCCCTCCGTCTAGGTGTGTAA 59.645 52.381 0.00 0.00 41.99 2.41
167 168 0.994247 TCCCTCCGTCTAGGTGTGTA 59.006 55.000 0.00 0.00 41.99 2.90
168 169 0.323542 CTCCCTCCGTCTAGGTGTGT 60.324 60.000 0.00 0.00 41.99 3.72
169 170 0.323542 ACTCCCTCCGTCTAGGTGTG 60.324 60.000 0.00 0.00 41.99 3.82
170 171 1.064832 GTACTCCCTCCGTCTAGGTGT 60.065 57.143 0.00 0.00 41.99 4.16
171 172 1.212441 AGTACTCCCTCCGTCTAGGTG 59.788 57.143 0.00 0.00 41.99 4.00
172 173 1.490069 GAGTACTCCCTCCGTCTAGGT 59.510 57.143 12.13 0.00 41.99 3.08
173 174 1.540797 CGAGTACTCCCTCCGTCTAGG 60.541 61.905 17.23 0.00 42.97 3.02
174 175 1.868469 CGAGTACTCCCTCCGTCTAG 58.132 60.000 17.23 0.00 0.00 2.43
175 176 0.179062 GCGAGTACTCCCTCCGTCTA 60.179 60.000 17.23 0.00 0.00 2.59
176 177 1.451747 GCGAGTACTCCCTCCGTCT 60.452 63.158 17.23 0.00 0.00 4.18
177 178 1.438562 GAGCGAGTACTCCCTCCGTC 61.439 65.000 22.05 3.11 30.38 4.79
178 179 1.451747 GAGCGAGTACTCCCTCCGT 60.452 63.158 22.05 0.00 30.38 4.69
179 180 3.423179 GAGCGAGTACTCCCTCCG 58.577 66.667 22.05 10.76 30.38 4.63
185 186 0.520404 TGTGAACGGAGCGAGTACTC 59.480 55.000 13.18 13.18 35.86 2.59
193 194 3.243401 ACCTCAAAATTTGTGAACGGAGC 60.243 43.478 9.10 0.00 0.00 4.70
263 267 8.960064 TCTGCTCCCCTCATATATAGATGTATA 58.040 37.037 7.21 0.00 0.00 1.47
327 334 3.587951 TCGCTCCCCTGTAGACTAGATAT 59.412 47.826 0.00 0.00 0.00 1.63
328 335 2.977580 TCGCTCCCCTGTAGACTAGATA 59.022 50.000 0.00 0.00 0.00 1.98
329 336 1.775459 TCGCTCCCCTGTAGACTAGAT 59.225 52.381 0.00 0.00 0.00 1.98
330 337 1.210538 TCGCTCCCCTGTAGACTAGA 58.789 55.000 0.00 0.00 0.00 2.43
381 388 0.816018 TCGCACCCTTCTCGCAAAAA 60.816 50.000 0.00 0.00 0.00 1.94
382 389 0.816018 TTCGCACCCTTCTCGCAAAA 60.816 50.000 0.00 0.00 0.00 2.44
383 390 1.227704 TTCGCACCCTTCTCGCAAA 60.228 52.632 0.00 0.00 0.00 3.68
384 391 1.959226 GTTCGCACCCTTCTCGCAA 60.959 57.895 0.00 0.00 0.00 4.85
385 392 2.357034 GTTCGCACCCTTCTCGCA 60.357 61.111 0.00 0.00 0.00 5.10
386 393 1.298859 ATTGTTCGCACCCTTCTCGC 61.299 55.000 0.00 0.00 0.00 5.03
387 394 2.004583 TATTGTTCGCACCCTTCTCG 57.995 50.000 0.00 0.00 0.00 4.04
388 395 3.063997 CACATATTGTTCGCACCCTTCTC 59.936 47.826 0.00 0.00 0.00 2.87
389 396 3.009723 CACATATTGTTCGCACCCTTCT 58.990 45.455 0.00 0.00 0.00 2.85
390 397 2.097466 CCACATATTGTTCGCACCCTTC 59.903 50.000 0.00 0.00 0.00 3.46
391 398 2.091541 CCACATATTGTTCGCACCCTT 58.908 47.619 0.00 0.00 0.00 3.95
392 399 1.750193 CCACATATTGTTCGCACCCT 58.250 50.000 0.00 0.00 0.00 4.34
393 400 0.100503 GCCACATATTGTTCGCACCC 59.899 55.000 0.00 0.00 0.00 4.61
394 401 0.100503 GGCCACATATTGTTCGCACC 59.899 55.000 0.00 0.00 0.00 5.01
395 402 0.100503 GGGCCACATATTGTTCGCAC 59.899 55.000 4.39 0.00 0.00 5.34
396 403 0.322906 TGGGCCACATATTGTTCGCA 60.323 50.000 0.00 0.00 0.00 5.10
397 404 1.032014 ATGGGCCACATATTGTTCGC 58.968 50.000 9.28 0.00 38.26 4.70
398 405 3.004315 GGTAATGGGCCACATATTGTTCG 59.996 47.826 9.28 0.00 39.40 3.95
399 406 3.957497 TGGTAATGGGCCACATATTGTTC 59.043 43.478 9.28 0.00 39.40 3.18
400 407 3.987745 TGGTAATGGGCCACATATTGTT 58.012 40.909 9.28 0.00 39.40 2.83
401 408 3.678965 TGGTAATGGGCCACATATTGT 57.321 42.857 9.28 0.00 39.40 2.71
402 409 3.511146 GGATGGTAATGGGCCACATATTG 59.489 47.826 9.28 0.00 39.40 1.90
403 410 3.141838 TGGATGGTAATGGGCCACATATT 59.858 43.478 9.28 0.76 39.40 1.28
404 411 2.721355 TGGATGGTAATGGGCCACATAT 59.279 45.455 9.28 0.00 39.40 1.78
405 412 2.139382 TGGATGGTAATGGGCCACATA 58.861 47.619 9.28 1.79 39.40 2.29
406 413 0.932955 TGGATGGTAATGGGCCACAT 59.067 50.000 9.28 7.90 43.07 3.21
407 414 0.033601 GTGGATGGTAATGGGCCACA 60.034 55.000 9.28 1.67 46.27 4.17
436 443 3.440522 AGTTCGCCATTCTTCTTTTAGCC 59.559 43.478 0.00 0.00 0.00 3.93
441 448 4.154918 CAGCTAAGTTCGCCATTCTTCTTT 59.845 41.667 0.00 0.00 0.00 2.52
470 481 6.383415 AGCTATCACGCTTATAAAGTAGCTC 58.617 40.000 0.00 0.00 39.34 4.09
485 498 3.064408 TGGAGTGTACGTAAGCTATCACG 59.936 47.826 12.35 12.35 43.63 4.35
489 502 4.647853 TGGAATGGAGTGTACGTAAGCTAT 59.352 41.667 0.00 0.00 45.62 2.97
490 503 4.018490 TGGAATGGAGTGTACGTAAGCTA 58.982 43.478 0.00 0.00 45.62 3.32
501 514 5.634859 GCAACAAGTAATTTGGAATGGAGTG 59.365 40.000 0.00 0.00 41.25 3.51
502 515 5.304101 TGCAACAAGTAATTTGGAATGGAGT 59.696 36.000 0.00 0.00 41.25 3.85
503 516 5.634859 GTGCAACAAGTAATTTGGAATGGAG 59.365 40.000 0.00 0.00 41.25 3.86
504 517 5.537188 GTGCAACAAGTAATTTGGAATGGA 58.463 37.500 0.00 0.00 41.25 3.41
505 518 5.844301 GTGCAACAAGTAATTTGGAATGG 57.156 39.130 0.00 0.00 41.25 3.16
521 534 9.212641 ACATCTAGATACATTCATATGTGCAAC 57.787 33.333 4.54 0.00 44.56 4.17
574 587 8.772250 TCCCTCTATTTCAAATTACTCATCACT 58.228 33.333 0.00 0.00 0.00 3.41
575 588 8.964476 TCCCTCTATTTCAAATTACTCATCAC 57.036 34.615 0.00 0.00 0.00 3.06
599 612 8.406297 AGATCCGCTTTTATTTGGAAACTATTC 58.594 33.333 0.00 0.00 33.48 1.75
600 613 8.293699 AGATCCGCTTTTATTTGGAAACTATT 57.706 30.769 0.00 0.00 33.48 1.73
601 614 7.881775 AGATCCGCTTTTATTTGGAAACTAT 57.118 32.000 0.00 0.00 33.48 2.12
635 648 3.447586 ACTGTTATCTGGCAGTACGTGAT 59.552 43.478 15.27 2.00 43.30 3.06
642 655 2.026915 TGCATCACTGTTATCTGGCAGT 60.027 45.455 15.27 4.62 45.69 4.40
645 658 2.358957 TGTGCATCACTGTTATCTGGC 58.641 47.619 0.00 0.00 35.11 4.85
656 669 2.574999 CACGCGCATGTGCATCAC 60.575 61.111 29.19 1.40 42.21 3.06
694 707 1.337817 CTTCGAGTCAGCAACGTCCG 61.338 60.000 0.00 0.00 0.00 4.79
696 709 1.618640 GCCTTCGAGTCAGCAACGTC 61.619 60.000 0.00 0.00 0.00 4.34
698 711 2.383527 GGCCTTCGAGTCAGCAACG 61.384 63.158 0.00 0.00 0.00 4.10
931 967 3.532155 GACCGCTGCTCCTCCGAT 61.532 66.667 0.00 0.00 0.00 4.18
996 1034 3.411446 CTGTTGCTCCTTGTCCATTACA 58.589 45.455 0.00 0.00 35.88 2.41
1161 1199 3.305950 GCTAGATCATCTGCAGGTAGGTG 60.306 52.174 15.13 5.82 0.00 4.00
1795 1865 6.925718 TGAGCCGTAAGATCAATTAGATGAAG 59.074 38.462 0.00 0.00 37.00 3.02
2051 2160 3.606687 AGTAGTATTTGTTTCCGCCAGG 58.393 45.455 0.00 0.00 39.46 4.45
2052 2161 6.537301 TGAATAGTAGTATTTGTTTCCGCCAG 59.463 38.462 4.31 0.00 0.00 4.85
2109 2232 9.308000 TCTCTCTCTCTCTCAAGTATTCTTTTT 57.692 33.333 0.00 0.00 0.00 1.94
2114 2242 7.500992 TCTCTCTCTCTCTCTCTCAAGTATTC 58.499 42.308 0.00 0.00 0.00 1.75
2118 2246 5.965033 ATCTCTCTCTCTCTCTCTCAAGT 57.035 43.478 0.00 0.00 0.00 3.16
2196 2337 6.823678 AGTTCGATTCGTATTCGCTTTATT 57.176 33.333 5.89 0.00 36.56 1.40
2249 2395 9.197694 GATAATAACTCTGCGTTACATCAGAAT 57.802 33.333 5.96 0.00 40.67 2.40
2250 2396 7.378728 CGATAATAACTCTGCGTTACATCAGAA 59.621 37.037 11.42 0.00 40.67 3.02
2276 2422 3.262420 AGTGCCAACGAATCATGACTAC 58.738 45.455 0.00 0.00 0.00 2.73
2277 2423 3.610040 AGTGCCAACGAATCATGACTA 57.390 42.857 0.00 0.00 0.00 2.59
2345 2491 4.720649 TCCTTTCATCTACTCCTTGACG 57.279 45.455 0.00 0.00 0.00 4.35
2421 2572 5.046950 GTCGGAAGCAAGGGATAGATAGATT 60.047 44.000 0.00 0.00 0.00 2.40
2426 2577 1.341531 CGTCGGAAGCAAGGGATAGAT 59.658 52.381 0.00 0.00 0.00 1.98
2428 2579 0.744874 TCGTCGGAAGCAAGGGATAG 59.255 55.000 0.00 0.00 0.00 2.08
2429 2580 1.187974 TTCGTCGGAAGCAAGGGATA 58.812 50.000 0.00 0.00 0.00 2.59
2430 2581 0.541863 ATTCGTCGGAAGCAAGGGAT 59.458 50.000 0.00 0.00 35.19 3.85
2431 2582 0.391130 CATTCGTCGGAAGCAAGGGA 60.391 55.000 0.00 0.00 35.19 4.20
2432 2583 1.982073 GCATTCGTCGGAAGCAAGGG 61.982 60.000 0.00 0.00 35.19 3.95
2433 2584 1.425428 GCATTCGTCGGAAGCAAGG 59.575 57.895 0.00 0.00 35.19 3.61
2434 2585 1.021390 AGGCATTCGTCGGAAGCAAG 61.021 55.000 2.77 0.00 35.19 4.01
2435 2586 1.003839 AGGCATTCGTCGGAAGCAA 60.004 52.632 2.77 0.00 35.19 3.91
2436 2587 1.741401 CAGGCATTCGTCGGAAGCA 60.741 57.895 2.77 0.00 35.19 3.91
2437 2588 2.464459 CCAGGCATTCGTCGGAAGC 61.464 63.158 0.00 0.00 35.19 3.86
2438 2589 0.179073 ATCCAGGCATTCGTCGGAAG 60.179 55.000 0.00 0.00 35.19 3.46
2439 2590 0.461870 CATCCAGGCATTCGTCGGAA 60.462 55.000 0.00 0.00 36.41 4.30
2440 2591 1.143838 CATCCAGGCATTCGTCGGA 59.856 57.895 0.00 0.00 0.00 4.55
2441 2592 1.889105 CCATCCAGGCATTCGTCGG 60.889 63.158 0.00 0.00 0.00 4.79
2442 2593 0.744414 AACCATCCAGGCATTCGTCG 60.744 55.000 0.00 0.00 43.14 5.12
2443 2594 1.017387 GAACCATCCAGGCATTCGTC 58.983 55.000 0.00 0.00 43.14 4.20
2444 2595 0.744414 CGAACCATCCAGGCATTCGT 60.744 55.000 0.00 0.00 39.64 3.85
2445 2596 0.461870 TCGAACCATCCAGGCATTCG 60.462 55.000 7.52 7.52 43.49 3.34
2478 2658 0.674581 CTTGAGCGGATGACAAGGCA 60.675 55.000 0.00 0.00 37.80 4.75
2520 2700 2.813754 CCCCAGTTGGATGTATAATGCG 59.186 50.000 0.00 0.00 37.39 4.73
2573 2757 9.827411 GAGAACATGAGAGTAAAAATTGGTAAC 57.173 33.333 0.00 0.00 0.00 2.50
2578 2762 8.659491 TCGATGAGAACATGAGAGTAAAAATTG 58.341 33.333 0.00 0.00 36.82 2.32
2580 2764 8.253810 TCTCGATGAGAACATGAGAGTAAAAAT 58.746 33.333 0.00 0.00 35.59 1.82
2623 2807 7.332182 GGAGTAGGTAATTTGTCACTTTCTCAG 59.668 40.741 0.00 0.00 0.00 3.35
2627 2811 7.390718 ACATGGAGTAGGTAATTTGTCACTTTC 59.609 37.037 0.00 0.00 0.00 2.62
2633 2817 9.444600 TCTTTTACATGGAGTAGGTAATTTGTC 57.555 33.333 0.00 0.00 35.68 3.18
2774 2966 4.041691 GGCAGGCATATAAAAGAGAGGGTA 59.958 45.833 0.00 0.00 0.00 3.69
2907 3099 1.661821 CGAGAAATAGCGGCGGGAG 60.662 63.158 9.78 0.00 0.00 4.30
3419 3611 0.528470 GAGACAAGCCTAGCACGAGT 59.472 55.000 0.00 0.00 0.00 4.18
3794 3986 1.310216 TGGCGGAATCGTCGAAGAGA 61.310 55.000 7.24 0.00 45.11 3.10
3826 4018 0.042448 TATCGATCACTGCGTCGTCG 60.042 55.000 0.00 0.00 38.85 5.12
3915 4107 3.977244 CGGGCCAACACCAACAGC 61.977 66.667 4.39 0.00 0.00 4.40
3981 4173 6.135290 TCAGCATCACATTGTATTTTAGGC 57.865 37.500 0.00 0.00 0.00 3.93
4039 4231 7.709149 TGATATCAGATCACTGTATAGGGTG 57.291 40.000 0.00 0.00 43.81 4.61
4189 4381 6.258947 GCCTAAATCGATCACTTCTTAAGCTT 59.741 38.462 3.48 3.48 0.00 3.74
4212 4406 7.907214 ATATCAGATAAACGAGTTTATGGCC 57.093 36.000 21.56 10.48 43.52 5.36
4265 4459 5.426504 TGTCATGGTCAGTTTGCAATTTTT 58.573 33.333 0.00 0.00 0.00 1.94
4304 4498 1.332195 AAAGAAGCCAGTTCCCAAGC 58.668 50.000 0.00 0.00 35.51 4.01
4307 4501 3.137544 TCTGTAAAAGAAGCCAGTTCCCA 59.862 43.478 0.00 0.00 35.51 4.37
4338 4532 5.004448 TGTGACGGTCAATTTGCCTATAAA 58.996 37.500 13.23 0.00 0.00 1.40
4339 4533 4.580868 TGTGACGGTCAATTTGCCTATAA 58.419 39.130 13.23 0.00 0.00 0.98
4340 4534 4.209307 TGTGACGGTCAATTTGCCTATA 57.791 40.909 13.23 0.00 0.00 1.31
4341 4535 3.066291 TGTGACGGTCAATTTGCCTAT 57.934 42.857 13.23 0.00 0.00 2.57
4342 4536 2.552599 TGTGACGGTCAATTTGCCTA 57.447 45.000 13.23 0.00 0.00 3.93
4343 4537 1.608590 CTTGTGACGGTCAATTTGCCT 59.391 47.619 13.23 0.00 0.00 4.75
4350 4544 3.188159 AGTTTAGCTTGTGACGGTCAA 57.812 42.857 13.23 0.00 0.00 3.18
4384 4897 3.304928 CCATGCCAAGTGACTGTTTTCTC 60.305 47.826 0.00 0.00 0.00 2.87
4435 4948 1.066303 CTCTAGTGTCTAGCAAGCCGG 59.934 57.143 0.00 0.00 0.00 6.13
4436 4949 1.746220 ACTCTAGTGTCTAGCAAGCCG 59.254 52.381 0.00 0.00 0.00 5.52
4437 4950 3.949113 ACTACTCTAGTGTCTAGCAAGCC 59.051 47.826 0.00 0.00 37.69 4.35
4444 4959 7.329499 CAGACCACTTACTACTCTAGTGTCTA 58.671 42.308 0.00 0.00 39.81 2.59
4451 4966 3.947868 ACGCAGACCACTTACTACTCTA 58.052 45.455 0.00 0.00 0.00 2.43
4456 4971 5.065602 CAGTATGTACGCAGACCACTTACTA 59.934 44.000 0.00 0.00 37.53 1.82
4468 4983 4.495184 CGTGACAGTATCAGTATGTACGCA 60.495 45.833 0.00 0.00 38.28 5.24
4481 4996 8.175069 CACAAATGTAAATTAGCGTGACAGTAT 58.825 33.333 0.00 0.00 0.00 2.12
4482 4997 7.171848 ACACAAATGTAAATTAGCGTGACAGTA 59.828 33.333 8.86 0.00 37.26 2.74
4483 4998 6.017440 ACACAAATGTAAATTAGCGTGACAGT 60.017 34.615 8.86 0.00 37.26 3.55
4484 4999 6.303022 CACACAAATGTAAATTAGCGTGACAG 59.697 38.462 8.86 0.00 36.72 3.51
4485 5000 6.017852 TCACACAAATGTAAATTAGCGTGACA 60.018 34.615 8.86 0.00 36.72 3.58
4486 5001 6.367421 TCACACAAATGTAAATTAGCGTGAC 58.633 36.000 8.86 0.00 36.72 3.67
4487 5002 6.546972 TCACACAAATGTAAATTAGCGTGA 57.453 33.333 8.86 5.30 36.72 4.35
4488 5003 7.020602 TCATCACACAAATGTAAATTAGCGTG 58.979 34.615 0.00 0.00 36.72 5.34
4489 5004 7.139896 TCATCACACAAATGTAAATTAGCGT 57.860 32.000 0.00 0.00 36.72 5.07
4490 5005 8.619146 ATTCATCACACAAATGTAAATTAGCG 57.381 30.769 0.00 0.00 36.72 4.26
4491 5006 9.571810 TGATTCATCACACAAATGTAAATTAGC 57.428 29.630 0.00 0.00 36.72 3.09
4495 5010 9.932207 ACATTGATTCATCACACAAATGTAAAT 57.068 25.926 3.29 0.00 36.72 1.40
4499 5014 9.361315 CATTACATTGATTCATCACACAAATGT 57.639 29.630 8.43 8.43 40.80 2.71
4500 5015 9.575783 TCATTACATTGATTCATCACACAAATG 57.424 29.630 0.00 0.00 36.36 2.32
4502 5017 9.409312 GTTCATTACATTGATTCATCACACAAA 57.591 29.630 0.00 0.00 36.36 2.83
4503 5018 8.574737 TGTTCATTACATTGATTCATCACACAA 58.425 29.630 0.00 0.00 36.36 3.33
4504 5019 8.108551 TGTTCATTACATTGATTCATCACACA 57.891 30.769 0.00 0.00 36.36 3.72
4505 5020 8.969121 TTGTTCATTACATTGATTCATCACAC 57.031 30.769 0.00 0.00 36.44 3.82
4519 5034 9.979578 AAAGCAATCAGTTTATTGTTCATTACA 57.020 25.926 0.00 0.00 38.78 2.41
4531 5046 9.693739 TCCCTTATCAATAAAGCAATCAGTTTA 57.306 29.630 0.00 0.00 0.00 2.01
4532 5047 8.593945 TCCCTTATCAATAAAGCAATCAGTTT 57.406 30.769 0.00 0.00 0.00 2.66
4533 5048 8.773033 ATCCCTTATCAATAAAGCAATCAGTT 57.227 30.769 0.00 0.00 0.00 3.16
4534 5049 8.773033 AATCCCTTATCAATAAAGCAATCAGT 57.227 30.769 0.00 0.00 0.00 3.41
4536 5051 9.639563 TGTAATCCCTTATCAATAAAGCAATCA 57.360 29.630 0.00 0.00 0.00 2.57
4539 5054 9.420118 ACATGTAATCCCTTATCAATAAAGCAA 57.580 29.630 0.00 0.00 0.00 3.91
4540 5055 8.995027 ACATGTAATCCCTTATCAATAAAGCA 57.005 30.769 0.00 0.00 0.00 3.91
4544 5059 9.884636 CCGATACATGTAATCCCTTATCAATAA 57.115 33.333 10.14 0.00 0.00 1.40
4545 5060 8.482943 CCCGATACATGTAATCCCTTATCAATA 58.517 37.037 10.14 0.00 0.00 1.90
4546 5061 7.338710 CCCGATACATGTAATCCCTTATCAAT 58.661 38.462 10.14 0.00 0.00 2.57
4547 5062 6.296202 CCCCGATACATGTAATCCCTTATCAA 60.296 42.308 10.14 0.00 0.00 2.57
4548 5063 5.188948 CCCCGATACATGTAATCCCTTATCA 59.811 44.000 10.14 0.00 0.00 2.15
4549 5064 5.424252 TCCCCGATACATGTAATCCCTTATC 59.576 44.000 10.14 0.25 0.00 1.75
4550 5065 5.347124 TCCCCGATACATGTAATCCCTTAT 58.653 41.667 10.14 0.00 0.00 1.73
4551 5066 4.754311 TCCCCGATACATGTAATCCCTTA 58.246 43.478 10.14 0.00 0.00 2.69
4552 5067 3.583086 CTCCCCGATACATGTAATCCCTT 59.417 47.826 10.14 0.00 0.00 3.95
4553 5068 3.173965 CTCCCCGATACATGTAATCCCT 58.826 50.000 10.14 0.00 0.00 4.20
4554 5069 3.056035 GTCTCCCCGATACATGTAATCCC 60.056 52.174 10.14 0.00 0.00 3.85
4555 5070 3.367087 CGTCTCCCCGATACATGTAATCC 60.367 52.174 10.14 1.71 0.00 3.01
4556 5071 3.255149 ACGTCTCCCCGATACATGTAATC 59.745 47.826 10.14 7.34 0.00 1.75
4557 5072 3.228453 ACGTCTCCCCGATACATGTAAT 58.772 45.455 10.14 0.00 0.00 1.89
4558 5073 2.658285 ACGTCTCCCCGATACATGTAA 58.342 47.619 10.14 0.00 0.00 2.41
4559 5074 2.353357 ACGTCTCCCCGATACATGTA 57.647 50.000 8.27 8.27 0.00 2.29
4560 5075 2.353357 TACGTCTCCCCGATACATGT 57.647 50.000 2.69 2.69 0.00 3.21
4561 5076 2.159558 CGATACGTCTCCCCGATACATG 60.160 54.545 0.00 0.00 0.00 3.21
4562 5077 2.082231 CGATACGTCTCCCCGATACAT 58.918 52.381 0.00 0.00 0.00 2.29
4563 5078 1.070601 TCGATACGTCTCCCCGATACA 59.929 52.381 0.00 0.00 0.00 2.29
4564 5079 1.800805 TCGATACGTCTCCCCGATAC 58.199 55.000 0.00 0.00 0.00 2.24
4565 5080 2.146342 GTTCGATACGTCTCCCCGATA 58.854 52.381 0.00 0.00 0.00 2.92
4566 5081 0.950116 GTTCGATACGTCTCCCCGAT 59.050 55.000 0.00 0.00 0.00 4.18
4567 5082 0.392863 TGTTCGATACGTCTCCCCGA 60.393 55.000 0.00 0.00 0.00 5.14
4568 5083 0.452987 TTGTTCGATACGTCTCCCCG 59.547 55.000 0.00 0.00 0.00 5.73
4569 5084 1.747355 TCTTGTTCGATACGTCTCCCC 59.253 52.381 0.00 0.00 0.00 4.81
4570 5085 3.177487 GTTCTTGTTCGATACGTCTCCC 58.823 50.000 0.00 0.00 0.00 4.30
4571 5086 2.844804 CGTTCTTGTTCGATACGTCTCC 59.155 50.000 0.00 0.00 0.00 3.71
4572 5087 3.486584 ACGTTCTTGTTCGATACGTCTC 58.513 45.455 0.00 0.00 41.04 3.36
4573 5088 3.549299 ACGTTCTTGTTCGATACGTCT 57.451 42.857 0.00 0.00 41.04 4.18
4575 5090 3.272439 TGACGTTCTTGTTCGATACGT 57.728 42.857 0.00 0.00 46.73 3.57
4576 5091 4.817987 ATTGACGTTCTTGTTCGATACG 57.182 40.909 0.00 0.00 38.14 3.06
4577 5092 4.781528 GCAATTGACGTTCTTGTTCGATAC 59.218 41.667 10.34 0.00 0.00 2.24
4578 5093 4.142988 GGCAATTGACGTTCTTGTTCGATA 60.143 41.667 10.34 0.00 0.00 2.92
4579 5094 3.364964 GGCAATTGACGTTCTTGTTCGAT 60.365 43.478 10.34 0.00 0.00 3.59
4580 5095 2.032377 GGCAATTGACGTTCTTGTTCGA 60.032 45.455 10.34 0.00 0.00 3.71
4581 5096 2.307049 GGCAATTGACGTTCTTGTTCG 58.693 47.619 10.34 0.00 0.00 3.95
4582 5097 2.307049 CGGCAATTGACGTTCTTGTTC 58.693 47.619 25.67 0.00 42.66 3.18
4583 5098 2.399396 CGGCAATTGACGTTCTTGTT 57.601 45.000 25.67 0.00 42.66 2.83
4592 5107 5.007724 CCCTACTATTCTTTCGGCAATTGAC 59.992 44.000 10.34 5.09 0.00 3.18
4593 5108 5.123227 CCCTACTATTCTTTCGGCAATTGA 58.877 41.667 10.34 0.00 0.00 2.57
4594 5109 4.275936 CCCCTACTATTCTTTCGGCAATTG 59.724 45.833 0.00 0.00 0.00 2.32
4595 5110 4.165372 TCCCCTACTATTCTTTCGGCAATT 59.835 41.667 0.00 0.00 0.00 2.32
4596 5111 3.714798 TCCCCTACTATTCTTTCGGCAAT 59.285 43.478 0.00 0.00 0.00 3.56
4597 5112 3.109151 TCCCCTACTATTCTTTCGGCAA 58.891 45.455 0.00 0.00 0.00 4.52
4598 5113 2.754465 TCCCCTACTATTCTTTCGGCA 58.246 47.619 0.00 0.00 0.00 5.69
4599 5114 3.071167 ACATCCCCTACTATTCTTTCGGC 59.929 47.826 0.00 0.00 0.00 5.54
4600 5115 4.101119 ACACATCCCCTACTATTCTTTCGG 59.899 45.833 0.00 0.00 0.00 4.30
4601 5116 5.277857 ACACATCCCCTACTATTCTTTCG 57.722 43.478 0.00 0.00 0.00 3.46
4602 5117 7.120923 TGTACACATCCCCTACTATTCTTTC 57.879 40.000 0.00 0.00 0.00 2.62
4603 5118 6.099845 CCTGTACACATCCCCTACTATTCTTT 59.900 42.308 0.00 0.00 0.00 2.52
4604 5119 5.602978 CCTGTACACATCCCCTACTATTCTT 59.397 44.000 0.00 0.00 0.00 2.52
4605 5120 5.103215 TCCTGTACACATCCCCTACTATTCT 60.103 44.000 0.00 0.00 0.00 2.40
4606 5121 5.145564 TCCTGTACACATCCCCTACTATTC 58.854 45.833 0.00 0.00 0.00 1.75
4607 5122 5.152306 TCCTGTACACATCCCCTACTATT 57.848 43.478 0.00 0.00 0.00 1.73
4608 5123 4.827036 TCCTGTACACATCCCCTACTAT 57.173 45.455 0.00 0.00 0.00 2.12
4609 5124 4.264487 TGTTCCTGTACACATCCCCTACTA 60.264 45.833 0.00 0.00 0.00 1.82
4610 5125 3.105283 GTTCCTGTACACATCCCCTACT 58.895 50.000 0.00 0.00 0.00 2.57
4611 5126 2.835764 TGTTCCTGTACACATCCCCTAC 59.164 50.000 0.00 0.00 0.00 3.18
4612 5127 3.193395 TGTTCCTGTACACATCCCCTA 57.807 47.619 0.00 0.00 0.00 3.53
4613 5128 2.038863 TGTTCCTGTACACATCCCCT 57.961 50.000 0.00 0.00 0.00 4.79
4614 5129 2.224670 TGTTGTTCCTGTACACATCCCC 60.225 50.000 0.00 0.00 0.00 4.81
4615 5130 2.812011 GTGTTGTTCCTGTACACATCCC 59.188 50.000 0.00 0.00 41.30 3.85
4616 5131 2.478894 CGTGTTGTTCCTGTACACATCC 59.521 50.000 0.00 0.00 41.64 3.51
4617 5132 3.128349 ACGTGTTGTTCCTGTACACATC 58.872 45.455 0.00 0.00 41.64 3.06
4618 5133 3.128349 GACGTGTTGTTCCTGTACACAT 58.872 45.455 0.00 0.00 41.64 3.21
4619 5134 2.542597 GACGTGTTGTTCCTGTACACA 58.457 47.619 0.00 0.00 41.64 3.72
4620 5135 1.519758 CGACGTGTTGTTCCTGTACAC 59.480 52.381 0.00 0.00 38.96 2.90
4621 5136 1.536496 CCGACGTGTTGTTCCTGTACA 60.536 52.381 0.00 0.00 0.00 2.90
4622 5137 1.134226 CCGACGTGTTGTTCCTGTAC 58.866 55.000 0.00 0.00 0.00 2.90
4623 5138 0.746063 ACCGACGTGTTGTTCCTGTA 59.254 50.000 0.00 0.00 0.00 2.74
4624 5139 0.108041 AACCGACGTGTTGTTCCTGT 60.108 50.000 0.00 0.00 0.00 4.00
4625 5140 1.523934 GTAACCGACGTGTTGTTCCTG 59.476 52.381 0.00 0.00 0.00 3.86
4626 5141 1.136695 TGTAACCGACGTGTTGTTCCT 59.863 47.619 0.00 0.00 0.00 3.36
4627 5142 1.569708 TGTAACCGACGTGTTGTTCC 58.430 50.000 0.00 0.00 0.00 3.62
4628 5143 2.604462 ACTTGTAACCGACGTGTTGTTC 59.396 45.455 0.00 4.16 0.00 3.18
4629 5144 2.349275 CACTTGTAACCGACGTGTTGTT 59.651 45.455 0.00 0.00 0.00 2.83
4630 5145 1.928503 CACTTGTAACCGACGTGTTGT 59.071 47.619 0.00 0.00 0.00 3.32
4631 5146 1.928503 ACACTTGTAACCGACGTGTTG 59.071 47.619 0.00 0.00 35.48 3.33
4632 5147 2.298411 ACACTTGTAACCGACGTGTT 57.702 45.000 0.00 0.00 35.48 3.32
4633 5148 2.618241 TCTACACTTGTAACCGACGTGT 59.382 45.455 0.00 0.00 41.26 4.49
4634 5149 3.272439 TCTACACTTGTAACCGACGTG 57.728 47.619 0.00 0.00 0.00 4.49
4635 5150 4.510038 AATCTACACTTGTAACCGACGT 57.490 40.909 0.00 0.00 0.00 4.34
4636 5151 4.325472 GGAAATCTACACTTGTAACCGACG 59.675 45.833 0.00 0.00 0.00 5.12
4637 5152 5.476614 AGGAAATCTACACTTGTAACCGAC 58.523 41.667 0.00 0.00 0.00 4.79
4638 5153 5.733620 AGGAAATCTACACTTGTAACCGA 57.266 39.130 0.00 0.00 0.00 4.69
4639 5154 7.894376 TTAAGGAAATCTACACTTGTAACCG 57.106 36.000 0.00 0.00 0.00 4.44
4679 5194 9.783256 GCGTAAATTAGGAAAGTGTTGATATTT 57.217 29.630 0.00 0.00 0.00 1.40
4680 5195 8.403236 GGCGTAAATTAGGAAAGTGTTGATATT 58.597 33.333 0.00 0.00 0.00 1.28
4681 5196 7.773690 AGGCGTAAATTAGGAAAGTGTTGATAT 59.226 33.333 0.00 0.00 0.00 1.63
4682 5197 7.065324 CAGGCGTAAATTAGGAAAGTGTTGATA 59.935 37.037 0.00 0.00 0.00 2.15
4683 5198 5.944007 AGGCGTAAATTAGGAAAGTGTTGAT 59.056 36.000 0.00 0.00 0.00 2.57
4684 5199 5.180492 CAGGCGTAAATTAGGAAAGTGTTGA 59.820 40.000 0.00 0.00 0.00 3.18
4685 5200 5.048991 ACAGGCGTAAATTAGGAAAGTGTTG 60.049 40.000 0.00 0.00 0.00 3.33
4686 5201 5.067954 ACAGGCGTAAATTAGGAAAGTGTT 58.932 37.500 0.00 0.00 0.00 3.32
4687 5202 4.648651 ACAGGCGTAAATTAGGAAAGTGT 58.351 39.130 0.00 0.00 0.00 3.55
4688 5203 4.094442 GGACAGGCGTAAATTAGGAAAGTG 59.906 45.833 0.00 0.00 0.00 3.16
4689 5204 4.259356 GGACAGGCGTAAATTAGGAAAGT 58.741 43.478 0.00 0.00 0.00 2.66
4690 5205 4.258543 TGGACAGGCGTAAATTAGGAAAG 58.741 43.478 0.00 0.00 0.00 2.62
4691 5206 4.289238 TGGACAGGCGTAAATTAGGAAA 57.711 40.909 0.00 0.00 0.00 3.13
4692 5207 3.985019 TGGACAGGCGTAAATTAGGAA 57.015 42.857 0.00 0.00 0.00 3.36
4693 5208 3.199071 ACATGGACAGGCGTAAATTAGGA 59.801 43.478 0.00 0.00 0.00 2.94
4694 5209 3.541632 ACATGGACAGGCGTAAATTAGG 58.458 45.455 0.00 0.00 0.00 2.69
4695 5210 5.815740 AGTTACATGGACAGGCGTAAATTAG 59.184 40.000 0.00 0.00 0.00 1.73
4696 5211 5.736813 AGTTACATGGACAGGCGTAAATTA 58.263 37.500 0.00 0.00 0.00 1.40
4697 5212 4.585879 AGTTACATGGACAGGCGTAAATT 58.414 39.130 0.00 0.00 0.00 1.82
4698 5213 4.216411 AGTTACATGGACAGGCGTAAAT 57.784 40.909 0.00 0.00 0.00 1.40
4699 5214 3.688694 AGTTACATGGACAGGCGTAAA 57.311 42.857 0.00 0.00 0.00 2.01
4700 5215 3.007074 TGAAGTTACATGGACAGGCGTAA 59.993 43.478 0.00 0.00 0.00 3.18
4701 5216 2.563620 TGAAGTTACATGGACAGGCGTA 59.436 45.455 0.00 0.00 0.00 4.42
4702 5217 1.346395 TGAAGTTACATGGACAGGCGT 59.654 47.619 0.00 0.00 0.00 5.68
4703 5218 2.093306 TGAAGTTACATGGACAGGCG 57.907 50.000 0.00 0.00 0.00 5.52
4704 5219 2.945668 GGATGAAGTTACATGGACAGGC 59.054 50.000 0.00 0.00 0.00 4.85
4705 5220 4.494091 AGGATGAAGTTACATGGACAGG 57.506 45.455 0.00 0.00 0.00 4.00
4706 5221 5.738909 AGAAGGATGAAGTTACATGGACAG 58.261 41.667 0.00 0.00 0.00 3.51
4707 5222 5.762179 AGAAGGATGAAGTTACATGGACA 57.238 39.130 0.00 0.00 0.00 4.02
4708 5223 8.561738 TTAAAGAAGGATGAAGTTACATGGAC 57.438 34.615 0.00 0.00 0.00 4.02
4709 5224 9.581289 TTTTAAAGAAGGATGAAGTTACATGGA 57.419 29.630 0.00 0.00 0.00 3.41
4710 5225 9.846248 CTTTTAAAGAAGGATGAAGTTACATGG 57.154 33.333 0.00 0.00 0.00 3.66
4733 5248 9.416284 TCTACAAGGTTTTTGGAGAAATACTTT 57.584 29.630 0.00 0.00 36.50 2.66
4734 5249 8.990163 TCTACAAGGTTTTTGGAGAAATACTT 57.010 30.769 0.00 0.00 36.50 2.24
4735 5250 8.990163 TTCTACAAGGTTTTTGGAGAAATACT 57.010 30.769 11.15 0.00 44.04 2.12
4761 5276 9.517868 TTTTTCATGGCATATTTCCTCATTTTT 57.482 25.926 0.00 0.00 0.00 1.94
4784 5299 8.716646 ACGTTTTCCTTTCTGAAATGATTTTT 57.283 26.923 8.59 0.00 34.41 1.94
4785 5300 8.716646 AACGTTTTCCTTTCTGAAATGATTTT 57.283 26.923 8.59 0.00 34.41 1.82
4786 5301 8.603181 CAAACGTTTTCCTTTCTGAAATGATTT 58.397 29.630 11.66 0.00 34.41 2.17
4787 5302 7.763985 ACAAACGTTTTCCTTTCTGAAATGATT 59.236 29.630 11.66 0.00 34.41 2.57
4788 5303 7.264947 ACAAACGTTTTCCTTTCTGAAATGAT 58.735 30.769 11.66 0.00 34.41 2.45
4789 5304 6.626302 ACAAACGTTTTCCTTTCTGAAATGA 58.374 32.000 11.66 3.68 34.41 2.57
4790 5305 6.291060 CGACAAACGTTTTCCTTTCTGAAATG 60.291 38.462 11.66 1.11 34.41 2.32
4791 5306 5.741982 CGACAAACGTTTTCCTTTCTGAAAT 59.258 36.000 11.66 0.00 34.41 2.17
4792 5307 5.090083 CGACAAACGTTTTCCTTTCTGAAA 58.910 37.500 11.66 2.44 37.22 2.69
4793 5308 4.654015 CGACAAACGTTTTCCTTTCTGAA 58.346 39.130 11.66 0.00 37.22 3.02
4794 5309 3.486209 GCGACAAACGTTTTCCTTTCTGA 60.486 43.478 11.66 0.00 44.60 3.27
4795 5310 2.781646 GCGACAAACGTTTTCCTTTCTG 59.218 45.455 11.66 0.34 44.60 3.02
4796 5311 2.223409 GGCGACAAACGTTTTCCTTTCT 60.223 45.455 11.66 0.00 44.60 2.52
4797 5312 2.114056 GGCGACAAACGTTTTCCTTTC 58.886 47.619 11.66 2.43 44.60 2.62
4798 5313 1.532298 CGGCGACAAACGTTTTCCTTT 60.532 47.619 11.66 0.00 44.60 3.11
4799 5314 0.028374 CGGCGACAAACGTTTTCCTT 59.972 50.000 11.66 0.00 44.60 3.36
4800 5315 1.644913 CGGCGACAAACGTTTTCCT 59.355 52.632 11.66 0.00 44.60 3.36
4801 5316 1.369568 CCGGCGACAAACGTTTTCC 60.370 57.895 11.66 9.23 44.60 3.13
4802 5317 0.655337 GTCCGGCGACAAACGTTTTC 60.655 55.000 11.66 11.26 44.60 2.29
4803 5318 1.352753 GTCCGGCGACAAACGTTTT 59.647 52.632 11.66 3.05 44.60 2.43
4804 5319 2.873604 CGTCCGGCGACAAACGTTT 61.874 57.895 9.30 7.96 44.77 3.60
4805 5320 3.332409 CGTCCGGCGACAAACGTT 61.332 61.111 9.30 0.00 44.77 3.99
4806 5321 4.268939 TCGTCCGGCGACAAACGT 62.269 61.111 9.30 0.00 45.68 3.99
4818 5333 1.737008 GAGTTTCAGCCGGTCGTCC 60.737 63.158 1.90 0.00 0.00 4.79
4819 5334 1.006571 TGAGTTTCAGCCGGTCGTC 60.007 57.895 1.90 0.00 0.00 4.20
4820 5335 1.006102 CTGAGTTTCAGCCGGTCGT 60.006 57.895 1.90 0.00 37.72 4.34
4821 5336 3.862124 CTGAGTTTCAGCCGGTCG 58.138 61.111 1.90 0.00 37.72 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.