Multiple sequence alignment - TraesCS5B01G102900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G102900 chr5B 100.000 4807 0 0 1 4807 136632452 136627646 0.000000e+00 8877
1 TraesCS5B01G102900 chr5B 99.415 342 2 0 1546 1887 595128813 595129154 5.280000e-174 621
2 TraesCS5B01G102900 chr5B 86.084 309 20 10 1 308 39542252 39542538 1.300000e-80 311
3 TraesCS5B01G102900 chr5B 87.732 269 19 9 127 386 595237294 595237031 7.820000e-78 302
4 TraesCS5B01G102900 chr5A 95.938 2388 79 11 1886 4263 137282110 137279731 0.000000e+00 3856
5 TraesCS5B01G102900 chr5A 91.795 1231 41 19 361 1552 137283316 137282107 0.000000e+00 1659
6 TraesCS5B01G102900 chr5A 91.771 559 15 7 4262 4807 137279569 137279029 0.000000e+00 749
7 TraesCS5B01G102900 chr5A 99.706 340 1 0 1549 1888 342567652 342567313 1.470000e-174 623
8 TraesCS5B01G102900 chr5D 95.933 2385 74 10 1886 4263 123887900 123885532 0.000000e+00 3845
9 TraesCS5B01G102900 chr5D 92.991 1170 33 14 410 1552 123889044 123887897 0.000000e+00 1661
10 TraesCS5B01G102900 chr5D 91.950 559 14 7 4262 4807 123885365 123884825 0.000000e+00 754
11 TraesCS5B01G102900 chr4B 99.706 340 1 0 1549 1888 370705924 370705585 1.470000e-174 623
12 TraesCS5B01G102900 chr4B 98.056 360 4 3 1529 1888 492204704 492204348 1.470000e-174 623
13 TraesCS5B01G102900 chr4B 100.000 335 0 0 1553 1887 128541211 128540877 1.900000e-173 619
14 TraesCS5B01G102900 chr4B 91.561 237 13 2 129 358 216964169 216964405 2.160000e-83 320
15 TraesCS5B01G102900 chr3B 100.000 336 0 0 1552 1887 736493741 736494076 5.280000e-174 621
16 TraesCS5B01G102900 chr3B 92.917 240 9 3 126 357 174456590 174456351 4.610000e-90 342
17 TraesCS5B01G102900 chr3B 88.976 254 18 5 132 376 762374014 762373762 6.040000e-79 305
18 TraesCS5B01G102900 chr2A 98.575 351 4 1 1538 1888 369214144 369213795 1.900000e-173 619
19 TraesCS5B01G102900 chr2A 88.514 148 10 6 1240 1385 29885561 29885419 6.400000e-39 172
20 TraesCS5B01G102900 chr1A 100.000 335 0 0 1553 1887 341181452 341181118 1.900000e-173 619
21 TraesCS5B01G102900 chr1A 86.538 364 25 11 1 363 8586208 8585868 3.510000e-101 379
22 TraesCS5B01G102900 chr1A 83.799 358 35 10 1 357 61669083 61668748 7.760000e-83 318
23 TraesCS5B01G102900 chr4A 96.703 364 6 5 1528 1887 635812556 635812917 6.880000e-168 601
24 TraesCS5B01G102900 chr2D 87.283 346 28 8 24 361 182808123 182808460 9.760000e-102 381
25 TraesCS5B01G102900 chr2D 89.209 139 9 5 1240 1376 27780253 27780119 8.270000e-38 169
26 TraesCS5B01G102900 chrUn 86.313 358 26 10 1 357 119391775 119391440 7.600000e-98 368
27 TraesCS5B01G102900 chr1B 86.275 357 26 10 3 358 36084700 36085034 2.730000e-97 366
28 TraesCS5B01G102900 chr1B 91.489 235 14 3 129 357 24832866 24832632 7.760000e-83 318
29 TraesCS5B01G102900 chr1B 90.833 240 14 3 126 357 593710216 593710455 1.000000e-81 315
30 TraesCS5B01G102900 chr1B 87.050 139 13 4 1249 1385 565902952 565902817 8.330000e-33 152
31 TraesCS5B01G102900 chr3A 85.754 358 28 10 1 357 747532724 747533059 1.650000e-94 357
32 TraesCS5B01G102900 chr3A 88.722 133 11 4 1246 1376 42641032 42641162 4.980000e-35 159
33 TraesCS5B01G102900 chr6A 85.515 359 29 9 1 358 3110618 3110954 2.130000e-93 353
34 TraesCS5B01G102900 chr6A 88.489 139 10 6 1240 1376 167178418 167178552 3.850000e-36 163
35 TraesCS5B01G102900 chr7A 87.857 280 22 5 90 357 106806243 106806522 7.760000e-83 318
36 TraesCS5B01G102900 chr2B 90.871 241 14 4 129 361 53946200 53945960 2.790000e-82 316
37 TraesCS5B01G102900 chr2B 88.435 147 10 6 1241 1385 43676747 43676606 2.300000e-38 171
38 TraesCS5B01G102900 chr6D 82.730 359 36 9 1 357 452189 451855 3.640000e-76 296
39 TraesCS5B01G102900 chr7B 87.681 138 14 3 1249 1385 27321918 27321783 1.790000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G102900 chr5B 136627646 136632452 4806 True 8877.000000 8877 100.000000 1 4807 1 chr5B.!!$R1 4806
1 TraesCS5B01G102900 chr5A 137279029 137283316 4287 True 2088.000000 3856 93.168000 361 4807 3 chr5A.!!$R2 4446
2 TraesCS5B01G102900 chr5D 123884825 123889044 4219 True 2086.666667 3845 93.624667 410 4807 3 chr5D.!!$R1 4397

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 208 0.032912 ACCAACCGGAACCAAAAGGT 60.033 50.0 9.46 0.45 38.88 3.50 F
1551 1603 0.039074 ACTCGGTCTTGAGCAACTCG 60.039 55.0 0.79 0.00 39.68 4.18 F
2509 2567 0.035534 TGCAATGCACCTACGATGGT 60.036 50.0 2.72 0.00 41.77 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1803 1855 0.178990 AAGTTCCAAGCACCCCTGAC 60.179 55.0 0.0 0.0 0.00 3.51 R
2677 2736 0.944386 CATTCTCCGGGTTTATGCGG 59.056 55.0 0.0 0.0 0.00 5.69 R
4105 4170 0.537143 TGGCAGACACCACCATGAAC 60.537 55.0 0.0 0.0 33.75 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.577649 GCAGTGTGCTCTACTCTTACA 57.422 47.619 0.00 0.00 40.96 2.41
21 22 3.246619 GCAGTGTGCTCTACTCTTACAC 58.753 50.000 0.00 0.00 40.96 2.90
22 23 3.305403 GCAGTGTGCTCTACTCTTACACA 60.305 47.826 0.00 0.00 42.93 3.72
23 24 4.796290 GCAGTGTGCTCTACTCTTACACAA 60.796 45.833 0.00 0.00 42.39 3.33
24 25 4.920340 CAGTGTGCTCTACTCTTACACAAG 59.080 45.833 0.00 0.00 42.39 3.16
25 26 4.021894 AGTGTGCTCTACTCTTACACAAGG 60.022 45.833 0.00 0.00 42.39 3.61
26 27 3.258372 TGTGCTCTACTCTTACACAAGGG 59.742 47.826 0.00 0.00 38.24 3.95
27 28 3.510360 GTGCTCTACTCTTACACAAGGGA 59.490 47.826 0.00 0.00 35.63 4.20
28 29 3.764434 TGCTCTACTCTTACACAAGGGAG 59.236 47.826 0.00 0.00 35.63 4.30
29 30 3.764972 GCTCTACTCTTACACAAGGGAGT 59.235 47.826 0.00 0.00 41.22 3.85
30 31 4.948621 GCTCTACTCTTACACAAGGGAGTA 59.051 45.833 0.00 0.00 39.39 2.59
31 32 5.595133 GCTCTACTCTTACACAAGGGAGTAT 59.405 44.000 0.00 0.00 39.52 2.12
32 33 6.771749 GCTCTACTCTTACACAAGGGAGTATA 59.228 42.308 0.00 0.00 39.52 1.47
33 34 7.449086 GCTCTACTCTTACACAAGGGAGTATAT 59.551 40.741 0.00 0.00 39.52 0.86
38 39 9.756571 ACTCTTACACAAGGGAGTATATATAGG 57.243 37.037 0.00 0.00 37.29 2.57
39 40 8.591114 TCTTACACAAGGGAGTATATATAGGC 57.409 38.462 0.00 0.00 32.22 3.93
40 41 8.174757 TCTTACACAAGGGAGTATATATAGGCA 58.825 37.037 0.00 0.00 32.22 4.75
41 42 6.607004 ACACAAGGGAGTATATATAGGCAC 57.393 41.667 0.00 0.00 0.00 5.01
42 43 6.082031 ACACAAGGGAGTATATATAGGCACA 58.918 40.000 0.00 0.00 0.00 4.57
43 44 6.730977 ACACAAGGGAGTATATATAGGCACAT 59.269 38.462 0.00 0.00 0.00 3.21
44 45 7.093289 ACACAAGGGAGTATATATAGGCACATC 60.093 40.741 0.00 0.00 0.00 3.06
45 46 6.959954 ACAAGGGAGTATATATAGGCACATCA 59.040 38.462 0.00 0.00 0.00 3.07
46 47 7.625280 ACAAGGGAGTATATATAGGCACATCAT 59.375 37.037 0.00 0.00 0.00 2.45
47 48 8.489489 CAAGGGAGTATATATAGGCACATCATT 58.511 37.037 0.00 0.00 0.00 2.57
48 49 8.027524 AGGGAGTATATATAGGCACATCATTG 57.972 38.462 0.00 0.00 0.00 2.82
49 50 7.071698 AGGGAGTATATATAGGCACATCATTGG 59.928 40.741 0.00 0.00 0.00 3.16
50 51 7.147479 GGGAGTATATATAGGCACATCATTGGT 60.147 40.741 0.00 0.00 0.00 3.67
51 52 7.928706 GGAGTATATATAGGCACATCATTGGTC 59.071 40.741 0.00 0.00 0.00 4.02
52 53 7.796054 AGTATATATAGGCACATCATTGGTCC 58.204 38.462 0.00 0.00 0.00 4.46
53 54 2.664402 ATAGGCACATCATTGGTCCC 57.336 50.000 0.00 0.00 0.00 4.46
54 55 0.180171 TAGGCACATCATTGGTCCCG 59.820 55.000 0.00 0.00 0.00 5.14
55 56 2.120909 GGCACATCATTGGTCCCGG 61.121 63.158 0.00 0.00 0.00 5.73
56 57 1.378514 GCACATCATTGGTCCCGGT 60.379 57.895 0.00 0.00 0.00 5.28
57 58 0.965363 GCACATCATTGGTCCCGGTT 60.965 55.000 0.00 0.00 0.00 4.44
58 59 0.810648 CACATCATTGGTCCCGGTTG 59.189 55.000 0.00 0.00 0.00 3.77
59 60 0.323360 ACATCATTGGTCCCGGTTGG 60.323 55.000 0.00 0.00 0.00 3.77
60 61 0.323360 CATCATTGGTCCCGGTTGGT 60.323 55.000 0.00 0.00 34.77 3.67
61 62 0.323360 ATCATTGGTCCCGGTTGGTG 60.323 55.000 0.00 0.00 34.77 4.17
62 63 1.976474 CATTGGTCCCGGTTGGTGG 60.976 63.158 0.00 0.00 34.77 4.61
63 64 3.879180 ATTGGTCCCGGTTGGTGGC 62.879 63.158 0.00 0.00 34.77 5.01
65 66 4.360405 GGTCCCGGTTGGTGGCAT 62.360 66.667 0.00 0.00 34.77 4.40
66 67 3.061848 GTCCCGGTTGGTGGCATG 61.062 66.667 0.00 0.00 34.77 4.06
67 68 3.253061 TCCCGGTTGGTGGCATGA 61.253 61.111 0.00 0.00 34.77 3.07
68 69 2.282816 CCCGGTTGGTGGCATGAA 60.283 61.111 0.00 0.00 0.00 2.57
69 70 2.635443 CCCGGTTGGTGGCATGAAC 61.635 63.158 0.00 0.00 0.00 3.18
70 71 2.635443 CCGGTTGGTGGCATGAACC 61.635 63.158 16.69 16.69 38.26 3.62
71 72 2.961768 GGTTGGTGGCATGAACCG 59.038 61.111 13.05 0.00 40.86 4.44
72 73 1.602323 GGTTGGTGGCATGAACCGA 60.602 57.895 13.05 8.30 40.86 4.69
73 74 1.586154 GGTTGGTGGCATGAACCGAG 61.586 60.000 13.05 0.00 40.86 4.63
74 75 0.605319 GTTGGTGGCATGAACCGAGA 60.605 55.000 11.99 0.70 40.86 4.04
75 76 0.605319 TTGGTGGCATGAACCGAGAC 60.605 55.000 11.99 0.00 40.86 3.36
76 77 1.296715 GGTGGCATGAACCGAGACT 59.703 57.895 0.00 0.00 0.00 3.24
77 78 0.535335 GGTGGCATGAACCGAGACTA 59.465 55.000 0.00 0.00 0.00 2.59
78 79 1.066430 GGTGGCATGAACCGAGACTAA 60.066 52.381 0.00 0.00 0.00 2.24
79 80 2.614481 GGTGGCATGAACCGAGACTAAA 60.614 50.000 0.00 0.00 0.00 1.85
80 81 2.673368 GTGGCATGAACCGAGACTAAAG 59.327 50.000 0.00 0.00 0.00 1.85
81 82 2.280628 GGCATGAACCGAGACTAAAGG 58.719 52.381 0.00 0.00 0.00 3.11
82 83 2.280628 GCATGAACCGAGACTAAAGGG 58.719 52.381 0.00 0.00 0.00 3.95
83 84 2.280628 CATGAACCGAGACTAAAGGGC 58.719 52.381 0.00 0.00 0.00 5.19
84 85 1.344065 TGAACCGAGACTAAAGGGCA 58.656 50.000 0.00 0.00 0.00 5.36
85 86 1.275291 TGAACCGAGACTAAAGGGCAG 59.725 52.381 0.00 0.00 0.00 4.85
86 87 0.036294 AACCGAGACTAAAGGGCAGC 60.036 55.000 0.00 0.00 0.00 5.25
87 88 1.153349 CCGAGACTAAAGGGCAGCC 60.153 63.158 1.26 1.26 0.00 4.85
88 89 1.617947 CCGAGACTAAAGGGCAGCCT 61.618 60.000 12.43 0.00 0.00 4.58
89 90 0.250513 CGAGACTAAAGGGCAGCCTT 59.749 55.000 12.43 0.00 0.00 4.35
90 91 1.339151 CGAGACTAAAGGGCAGCCTTT 60.339 52.381 12.43 7.32 41.97 3.11
91 92 2.087646 GAGACTAAAGGGCAGCCTTTG 58.912 52.381 10.08 0.47 39.87 2.77
92 93 1.177401 GACTAAAGGGCAGCCTTTGG 58.823 55.000 10.08 14.43 41.76 3.28
93 94 0.482887 ACTAAAGGGCAGCCTTTGGT 59.517 50.000 10.08 14.87 43.30 3.67
94 95 1.177401 CTAAAGGGCAGCCTTTGGTC 58.823 55.000 10.08 0.00 39.87 4.02
95 96 0.251608 TAAAGGGCAGCCTTTGGTCC 60.252 55.000 10.08 0.00 39.87 4.46
96 97 3.529835 AAGGGCAGCCTTTGGTCCC 62.530 63.158 12.43 0.00 37.24 4.46
99 100 4.660938 GCAGCCTTTGGTCCCGGT 62.661 66.667 0.00 0.00 0.00 5.28
100 101 2.115266 CAGCCTTTGGTCCCGGTT 59.885 61.111 0.00 0.00 0.00 4.44
101 102 1.971695 CAGCCTTTGGTCCCGGTTC 60.972 63.158 0.00 0.00 0.00 3.62
102 103 2.114411 GCCTTTGGTCCCGGTTCA 59.886 61.111 0.00 0.00 0.00 3.18
103 104 1.529713 GCCTTTGGTCCCGGTTCAA 60.530 57.895 0.00 0.00 0.00 2.69
104 105 1.524008 GCCTTTGGTCCCGGTTCAAG 61.524 60.000 0.00 0.00 0.00 3.02
105 106 1.524008 CCTTTGGTCCCGGTTCAAGC 61.524 60.000 0.00 0.00 0.00 4.01
106 107 1.524008 CTTTGGTCCCGGTTCAAGCC 61.524 60.000 0.00 0.00 0.00 4.35
107 108 2.285889 TTTGGTCCCGGTTCAAGCCA 62.286 55.000 0.00 0.00 0.00 4.75
108 109 2.671963 GGTCCCGGTTCAAGCCAC 60.672 66.667 0.00 0.00 0.00 5.01
109 110 2.671963 GTCCCGGTTCAAGCCACC 60.672 66.667 0.00 0.00 0.00 4.61
110 111 3.172106 TCCCGGTTCAAGCCACCA 61.172 61.111 0.00 0.00 33.36 4.17
111 112 2.203422 CCCGGTTCAAGCCACCAA 60.203 61.111 0.00 0.00 33.36 3.67
112 113 2.561037 CCCGGTTCAAGCCACCAAC 61.561 63.158 0.00 0.00 33.36 3.77
113 114 2.561037 CCGGTTCAAGCCACCAACC 61.561 63.158 0.00 0.00 36.91 3.77
114 115 3.039134 GGTTCAAGCCACCAACCG 58.961 61.111 0.00 0.00 34.04 4.44
115 116 2.561037 GGTTCAAGCCACCAACCGG 61.561 63.158 0.00 0.00 34.04 5.28
116 117 2.203422 TTCAAGCCACCAACCGGG 60.203 61.111 6.32 0.00 44.81 5.73
117 118 2.758207 TTCAAGCCACCAACCGGGA 61.758 57.895 6.32 0.00 41.15 5.14
118 119 2.969300 TTCAAGCCACCAACCGGGAC 62.969 60.000 6.32 0.00 41.15 4.46
119 120 4.280019 AAGCCACCAACCGGGACC 62.280 66.667 6.32 0.00 41.15 4.46
121 122 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
122 123 2.438795 CCACCAACCGGGACCAAT 59.561 61.111 6.32 0.00 41.15 3.16
123 124 1.976474 CCACCAACCGGGACCAATG 60.976 63.158 6.32 0.00 41.15 2.82
124 125 1.976474 CACCAACCGGGACCAATGG 60.976 63.158 6.32 0.00 41.15 3.16
125 126 2.438795 CCAACCGGGACCAATGGT 59.561 61.111 3.74 3.74 40.01 3.55
126 127 1.976474 CCAACCGGGACCAATGGTG 60.976 63.158 10.84 0.00 40.01 4.17
135 136 4.517663 CCAATGGTGGTCAAGCCA 57.482 55.556 0.00 0.00 46.95 4.75
142 143 2.203280 TGGTCAAGCCACCAACCG 60.203 61.111 0.00 0.00 43.88 4.44
143 144 2.983592 GGTCAAGCCACCAACCGG 60.984 66.667 0.00 0.00 36.32 5.28
144 145 2.112297 GTCAAGCCACCAACCGGA 59.888 61.111 9.46 0.00 35.59 5.14
145 146 1.527380 GTCAAGCCACCAACCGGAA 60.527 57.895 9.46 0.00 35.59 4.30
146 147 1.527380 TCAAGCCACCAACCGGAAC 60.527 57.895 9.46 0.00 35.59 3.62
147 148 2.203437 AAGCCACCAACCGGAACC 60.203 61.111 9.46 0.00 35.59 3.62
148 149 3.063197 AAGCCACCAACCGGAACCA 62.063 57.895 9.46 0.00 35.59 3.67
149 150 2.519780 GCCACCAACCGGAACCAA 60.520 61.111 9.46 0.00 35.59 3.67
150 151 1.906333 GCCACCAACCGGAACCAAT 60.906 57.895 9.46 0.00 35.59 3.16
151 152 1.963679 CCACCAACCGGAACCAATG 59.036 57.895 9.46 0.00 35.59 2.82
152 153 0.538516 CCACCAACCGGAACCAATGA 60.539 55.000 9.46 0.00 35.59 2.57
153 154 1.544724 CACCAACCGGAACCAATGAT 58.455 50.000 9.46 0.00 35.59 2.45
154 155 1.202114 CACCAACCGGAACCAATGATG 59.798 52.381 9.46 0.00 35.59 3.07
155 156 1.890573 ACCAACCGGAACCAATGATGG 60.891 52.381 9.46 4.56 43.90 3.51
177 178 4.247380 CCAGGAGCGAGGCCCATC 62.247 72.222 0.00 0.00 0.00 3.51
178 179 4.598894 CAGGAGCGAGGCCCATCG 62.599 72.222 9.92 9.92 45.48 3.84
184 185 4.143333 CGAGGCCCATCGGTTCGT 62.143 66.667 6.50 0.00 39.04 3.85
185 186 2.202892 GAGGCCCATCGGTTCGTC 60.203 66.667 0.00 0.00 0.00 4.20
186 187 3.735037 GAGGCCCATCGGTTCGTCC 62.735 68.421 0.00 0.00 0.00 4.79
187 188 4.851179 GGCCCATCGGTTCGTCCC 62.851 72.222 0.00 0.00 0.00 4.46
188 189 4.090588 GCCCATCGGTTCGTCCCA 62.091 66.667 0.00 0.00 0.00 4.37
189 190 2.125269 CCCATCGGTTCGTCCCAC 60.125 66.667 0.00 0.00 0.00 4.61
190 191 2.125269 CCATCGGTTCGTCCCACC 60.125 66.667 0.00 0.00 0.00 4.61
191 192 2.660206 CATCGGTTCGTCCCACCA 59.340 61.111 0.00 0.00 33.36 4.17
192 193 1.004320 CATCGGTTCGTCCCACCAA 60.004 57.895 0.00 0.00 33.36 3.67
193 194 1.004200 ATCGGTTCGTCCCACCAAC 60.004 57.895 0.00 0.00 33.36 3.77
194 195 2.459202 ATCGGTTCGTCCCACCAACC 62.459 60.000 0.00 0.00 36.91 3.77
195 196 2.667199 GGTTCGTCCCACCAACCG 60.667 66.667 0.00 0.00 34.04 4.44
196 197 2.667199 GTTCGTCCCACCAACCGG 60.667 66.667 0.00 0.00 38.77 5.28
197 198 2.843411 TTCGTCCCACCAACCGGA 60.843 61.111 9.46 0.00 35.59 5.14
198 199 2.441675 TTCGTCCCACCAACCGGAA 61.442 57.895 9.46 0.00 35.59 4.30
199 200 2.663423 TTCGTCCCACCAACCGGAAC 62.663 60.000 9.46 0.00 35.59 3.62
200 201 2.281970 GTCCCACCAACCGGAACC 60.282 66.667 9.46 0.00 35.59 3.62
201 202 2.773053 TCCCACCAACCGGAACCA 60.773 61.111 9.46 0.00 35.59 3.67
202 203 2.196229 CCCACCAACCGGAACCAA 59.804 61.111 9.46 0.00 35.59 3.67
203 204 1.455959 CCCACCAACCGGAACCAAA 60.456 57.895 9.46 0.00 35.59 3.28
204 205 1.043673 CCCACCAACCGGAACCAAAA 61.044 55.000 9.46 0.00 35.59 2.44
205 206 0.387565 CCACCAACCGGAACCAAAAG 59.612 55.000 9.46 0.00 35.59 2.27
206 207 0.387565 CACCAACCGGAACCAAAAGG 59.612 55.000 9.46 0.00 35.59 3.11
207 208 0.032912 ACCAACCGGAACCAAAAGGT 60.033 50.000 9.46 0.45 38.88 3.50
208 209 0.671796 CCAACCGGAACCAAAAGGTC 59.328 55.000 9.46 0.00 35.68 3.85
209 210 0.671796 CAACCGGAACCAAAAGGTCC 59.328 55.000 9.46 0.00 35.68 4.46
210 211 0.259356 AACCGGAACCAAAAGGTCCA 59.741 50.000 9.46 0.00 35.68 4.02
211 212 0.179001 ACCGGAACCAAAAGGTCCAG 60.179 55.000 9.46 0.00 29.76 3.86
212 213 0.109723 CCGGAACCAAAAGGTCCAGA 59.890 55.000 0.00 0.00 0.00 3.86
213 214 1.235724 CGGAACCAAAAGGTCCAGAC 58.764 55.000 0.00 0.00 0.00 3.51
214 215 1.235724 GGAACCAAAAGGTCCAGACG 58.764 55.000 0.00 0.00 0.00 4.18
215 216 1.202722 GGAACCAAAAGGTCCAGACGA 60.203 52.381 0.00 0.00 0.00 4.20
216 217 2.567985 GAACCAAAAGGTCCAGACGAA 58.432 47.619 0.00 0.00 0.00 3.85
217 218 1.963172 ACCAAAAGGTCCAGACGAAC 58.037 50.000 0.00 0.00 0.00 3.95
218 219 1.235724 CCAAAAGGTCCAGACGAACC 58.764 55.000 0.00 0.00 35.69 3.62
219 220 0.865769 CAAAAGGTCCAGACGAACCG 59.134 55.000 0.00 0.00 40.63 4.44
220 221 0.250166 AAAAGGTCCAGACGAACCGG 60.250 55.000 0.00 0.00 40.63 5.28
221 222 1.117142 AAAGGTCCAGACGAACCGGA 61.117 55.000 9.46 0.00 40.63 5.14
222 223 1.117142 AAGGTCCAGACGAACCGGAA 61.117 55.000 9.46 0.00 40.63 4.30
223 224 1.373873 GGTCCAGACGAACCGGAAC 60.374 63.158 9.46 0.00 0.00 3.62
224 225 1.373873 GTCCAGACGAACCGGAACC 60.374 63.158 9.46 0.00 0.00 3.62
225 226 1.833492 TCCAGACGAACCGGAACCA 60.833 57.895 9.46 0.00 0.00 3.67
226 227 1.070105 CCAGACGAACCGGAACCAA 59.930 57.895 9.46 0.00 0.00 3.67
227 228 0.321298 CCAGACGAACCGGAACCAAT 60.321 55.000 9.46 0.00 0.00 3.16
228 229 0.796312 CAGACGAACCGGAACCAATG 59.204 55.000 9.46 0.00 0.00 2.82
229 230 0.682852 AGACGAACCGGAACCAATGA 59.317 50.000 9.46 0.00 0.00 2.57
230 231 0.794473 GACGAACCGGAACCAATGAC 59.206 55.000 9.46 0.00 0.00 3.06
231 232 0.604511 ACGAACCGGAACCAATGACC 60.605 55.000 9.46 0.00 0.00 4.02
232 233 1.303091 CGAACCGGAACCAATGACCC 61.303 60.000 9.46 0.00 0.00 4.46
233 234 0.250989 GAACCGGAACCAATGACCCA 60.251 55.000 9.46 0.00 0.00 4.51
234 235 0.538746 AACCGGAACCAATGACCCAC 60.539 55.000 9.46 0.00 0.00 4.61
235 236 2.038269 CCGGAACCAATGACCCACG 61.038 63.158 0.00 0.00 0.00 4.94
236 237 1.302192 CGGAACCAATGACCCACGT 60.302 57.895 0.00 0.00 0.00 4.49
237 238 1.573829 CGGAACCAATGACCCACGTG 61.574 60.000 9.08 9.08 0.00 4.49
238 239 1.241315 GGAACCAATGACCCACGTGG 61.241 60.000 28.26 28.26 41.37 4.94
239 240 1.862602 GAACCAATGACCCACGTGGC 61.863 60.000 29.75 16.98 37.83 5.01
240 241 3.061848 CCAATGACCCACGTGGCC 61.062 66.667 29.75 21.71 37.83 5.36
241 242 3.061848 CAATGACCCACGTGGCCC 61.062 66.667 29.75 21.36 37.83 5.80
242 243 4.715523 AATGACCCACGTGGCCCG 62.716 66.667 29.75 18.03 44.03 6.13
271 272 4.754667 GGGCTCACGAACCGGGTC 62.755 72.222 10.31 10.31 0.00 4.46
272 273 4.754667 GGCTCACGAACCGGGTCC 62.755 72.222 15.47 0.00 0.00 4.46
273 274 3.998672 GCTCACGAACCGGGTCCA 61.999 66.667 15.47 0.00 0.00 4.02
274 275 2.738480 CTCACGAACCGGGTCCAA 59.262 61.111 15.47 0.00 0.00 3.53
275 276 1.295423 CTCACGAACCGGGTCCAAT 59.705 57.895 15.47 0.00 0.00 3.16
276 277 1.004320 TCACGAACCGGGTCCAATG 60.004 57.895 15.47 10.37 0.00 2.82
277 278 2.359478 ACGAACCGGGTCCAATGC 60.359 61.111 15.47 0.00 0.00 3.56
278 279 3.131478 CGAACCGGGTCCAATGCC 61.131 66.667 15.47 0.00 0.00 4.40
279 280 2.754254 GAACCGGGTCCAATGCCC 60.754 66.667 8.85 0.00 42.68 5.36
280 281 4.376170 AACCGGGTCCAATGCCCC 62.376 66.667 6.32 0.00 43.18 5.80
282 283 4.141876 CCGGGTCCAATGCCCCAT 62.142 66.667 0.00 0.00 43.18 4.00
283 284 2.834505 CGGGTCCAATGCCCCATG 60.835 66.667 6.95 0.00 43.18 3.66
284 285 2.444517 GGGTCCAATGCCCCATGG 60.445 66.667 4.14 4.14 40.88 3.66
285 286 2.689175 GGTCCAATGCCCCATGGA 59.311 61.111 15.22 0.00 0.00 3.41
286 287 1.233949 GGTCCAATGCCCCATGGAT 59.766 57.895 15.22 0.00 32.60 3.41
287 288 0.398948 GGTCCAATGCCCCATGGATT 60.399 55.000 15.22 1.75 32.60 3.01
288 289 1.043022 GTCCAATGCCCCATGGATTC 58.957 55.000 15.22 1.84 32.60 2.52
289 290 0.105555 TCCAATGCCCCATGGATTCC 60.106 55.000 15.22 0.00 0.00 3.01
290 291 1.466025 CCAATGCCCCATGGATTCCG 61.466 60.000 15.22 0.00 0.00 4.30
291 292 1.152483 AATGCCCCATGGATTCCGG 60.152 57.895 15.22 6.45 0.00 5.14
292 293 1.948403 AATGCCCCATGGATTCCGGT 61.948 55.000 15.22 0.00 0.00 5.28
293 294 1.948403 ATGCCCCATGGATTCCGGTT 61.948 55.000 15.22 0.00 0.00 4.44
294 295 1.828224 GCCCCATGGATTCCGGTTC 60.828 63.158 15.22 0.00 0.00 3.62
295 296 1.922821 CCCCATGGATTCCGGTTCT 59.077 57.895 15.22 0.00 0.00 3.01
296 297 0.466189 CCCCATGGATTCCGGTTCTG 60.466 60.000 15.22 0.00 0.00 3.02
297 298 0.466189 CCCATGGATTCCGGTTCTGG 60.466 60.000 15.22 5.04 0.00 3.86
298 299 0.546122 CCATGGATTCCGGTTCTGGA 59.454 55.000 5.56 0.00 35.83 3.86
299 300 1.668419 CATGGATTCCGGTTCTGGAC 58.332 55.000 0.00 0.00 37.89 4.02
300 301 1.210478 CATGGATTCCGGTTCTGGACT 59.790 52.381 0.00 0.00 37.89 3.85
301 302 0.613260 TGGATTCCGGTTCTGGACTG 59.387 55.000 0.00 0.00 37.89 3.51
302 303 0.902531 GGATTCCGGTTCTGGACTGA 59.097 55.000 0.00 0.00 37.89 3.41
303 304 1.278127 GGATTCCGGTTCTGGACTGAA 59.722 52.381 0.00 0.00 37.89 3.02
304 305 2.347731 GATTCCGGTTCTGGACTGAAC 58.652 52.381 0.00 12.04 43.88 3.18
311 312 1.420430 TTCTGGACTGAACCGGAACT 58.580 50.000 9.46 0.00 46.43 3.01
312 313 2.297698 TCTGGACTGAACCGGAACTA 57.702 50.000 9.46 0.00 41.67 2.24
313 314 2.600790 TCTGGACTGAACCGGAACTAA 58.399 47.619 9.46 0.00 41.67 2.24
314 315 3.170717 TCTGGACTGAACCGGAACTAAT 58.829 45.455 9.46 0.00 41.67 1.73
315 316 3.056107 TCTGGACTGAACCGGAACTAATG 60.056 47.826 9.46 0.00 41.67 1.90
316 317 2.901192 TGGACTGAACCGGAACTAATGA 59.099 45.455 9.46 0.00 0.00 2.57
317 318 3.056107 TGGACTGAACCGGAACTAATGAG 60.056 47.826 9.46 0.00 0.00 2.90
318 319 2.930682 GACTGAACCGGAACTAATGAGC 59.069 50.000 9.46 0.00 0.00 4.26
319 320 2.567615 ACTGAACCGGAACTAATGAGCT 59.432 45.455 9.46 0.00 0.00 4.09
320 321 2.932614 CTGAACCGGAACTAATGAGCTG 59.067 50.000 9.46 0.00 0.00 4.24
321 322 2.565391 TGAACCGGAACTAATGAGCTGA 59.435 45.455 9.46 0.00 0.00 4.26
322 323 2.674796 ACCGGAACTAATGAGCTGAC 57.325 50.000 9.46 0.00 0.00 3.51
323 324 1.207329 ACCGGAACTAATGAGCTGACC 59.793 52.381 9.46 0.00 0.00 4.02
324 325 1.473434 CCGGAACTAATGAGCTGACCC 60.473 57.143 0.00 0.00 0.00 4.46
325 326 1.802880 CGGAACTAATGAGCTGACCCG 60.803 57.143 0.00 0.00 0.00 5.28
326 327 1.473434 GGAACTAATGAGCTGACCCGG 60.473 57.143 0.00 0.00 0.00 5.73
327 328 0.107654 AACTAATGAGCTGACCCGGC 60.108 55.000 0.00 0.00 35.73 6.13
328 329 1.227674 CTAATGAGCTGACCCGGCC 60.228 63.158 0.00 0.00 36.20 6.13
329 330 1.689233 TAATGAGCTGACCCGGCCT 60.689 57.895 0.00 0.00 36.20 5.19
330 331 1.971505 TAATGAGCTGACCCGGCCTG 61.972 60.000 0.00 0.00 36.20 4.85
336 337 4.974438 TGACCCGGCCTGGACCTT 62.974 66.667 21.63 0.00 42.00 3.50
337 338 3.647771 GACCCGGCCTGGACCTTT 61.648 66.667 21.63 0.00 42.00 3.11
338 339 3.920093 GACCCGGCCTGGACCTTTG 62.920 68.421 21.63 2.26 42.00 2.77
342 343 3.984732 GGCCTGGACCTTTGCCCT 61.985 66.667 0.00 0.00 37.94 5.19
343 344 2.361737 GCCTGGACCTTTGCCCTC 60.362 66.667 0.00 0.00 0.00 4.30
344 345 2.911926 GCCTGGACCTTTGCCCTCT 61.912 63.158 0.00 0.00 0.00 3.69
345 346 1.770324 CCTGGACCTTTGCCCTCTT 59.230 57.895 0.00 0.00 0.00 2.85
346 347 0.113190 CCTGGACCTTTGCCCTCTTT 59.887 55.000 0.00 0.00 0.00 2.52
347 348 1.481242 CCTGGACCTTTGCCCTCTTTT 60.481 52.381 0.00 0.00 0.00 2.27
348 349 1.889170 CTGGACCTTTGCCCTCTTTTC 59.111 52.381 0.00 0.00 0.00 2.29
349 350 1.499007 TGGACCTTTGCCCTCTTTTCT 59.501 47.619 0.00 0.00 0.00 2.52
350 351 2.714250 TGGACCTTTGCCCTCTTTTCTA 59.286 45.455 0.00 0.00 0.00 2.10
351 352 3.082548 GGACCTTTGCCCTCTTTTCTAC 58.917 50.000 0.00 0.00 0.00 2.59
352 353 3.244946 GGACCTTTGCCCTCTTTTCTACT 60.245 47.826 0.00 0.00 0.00 2.57
353 354 4.019591 GGACCTTTGCCCTCTTTTCTACTA 60.020 45.833 0.00 0.00 0.00 1.82
354 355 5.167303 ACCTTTGCCCTCTTTTCTACTAG 57.833 43.478 0.00 0.00 0.00 2.57
355 356 4.597940 ACCTTTGCCCTCTTTTCTACTAGT 59.402 41.667 0.00 0.00 0.00 2.57
356 357 4.938226 CCTTTGCCCTCTTTTCTACTAGTG 59.062 45.833 5.39 0.00 0.00 2.74
357 358 5.513267 CCTTTGCCCTCTTTTCTACTAGTGT 60.513 44.000 5.39 0.00 0.00 3.55
358 359 5.562298 TTGCCCTCTTTTCTACTAGTGTT 57.438 39.130 5.39 0.00 0.00 3.32
359 360 6.675413 TTGCCCTCTTTTCTACTAGTGTTA 57.325 37.500 5.39 0.00 0.00 2.41
381 382 8.746530 TGTTACCCTATAGTTTCAACTAGACAG 58.253 37.037 0.00 3.23 44.06 3.51
386 387 6.253727 CCTATAGTTTCAACTAGACAGCAACG 59.746 42.308 0.00 0.00 44.06 4.10
394 395 2.069273 CTAGACAGCAACGAACAAGGG 58.931 52.381 0.00 0.00 0.00 3.95
407 408 2.770904 AAGGGTCACCACCACCGT 60.771 61.111 0.00 0.00 45.94 4.83
494 502 4.053067 GTCCGTACGAGCGTTGAG 57.947 61.111 18.76 0.00 0.00 3.02
636 662 3.003480 GGGTCAGAGTTTGAATCCTTCG 58.997 50.000 0.00 0.00 37.61 3.79
652 678 0.519519 TTCGCATACCCTTTTGCACG 59.480 50.000 0.00 0.00 38.80 5.34
656 682 0.179200 CATACCCTTTTGCACGTCGC 60.179 55.000 0.00 3.44 42.89 5.19
660 686 2.978010 CTTTTGCACGTCGCCCCT 60.978 61.111 7.38 0.00 41.33 4.79
680 706 5.182380 CCCCTTCTGCGTTCAAAACTATTTA 59.818 40.000 0.00 0.00 0.00 1.40
756 784 2.279069 ACCTCACCACCGCAGAGAG 61.279 63.158 0.00 0.00 0.00 3.20
757 785 1.979155 CCTCACCACCGCAGAGAGA 60.979 63.158 0.00 0.00 0.00 3.10
843 879 1.132588 GCTTCGATCTATGTGTCCGC 58.867 55.000 0.00 0.00 0.00 5.54
866 902 0.370273 CGCGATTTCGAAAGGGAGTG 59.630 55.000 16.80 9.67 43.02 3.51
969 1009 4.008933 GGCCGCTGTGTGAGGAGT 62.009 66.667 0.00 0.00 37.90 3.85
989 1029 2.520458 TGGTGGAAGCAACCCAGG 59.480 61.111 0.00 0.00 44.10 4.45
990 1030 2.081787 TGGTGGAAGCAACCCAGGA 61.082 57.895 0.00 0.00 44.10 3.86
991 1031 1.303643 GGTGGAAGCAACCCAGGAG 60.304 63.158 0.00 0.00 33.75 3.69
992 1032 1.303643 GTGGAAGCAACCCAGGAGG 60.304 63.158 0.00 0.00 43.78 4.30
993 1033 1.463214 TGGAAGCAACCCAGGAGGA 60.463 57.895 0.00 0.00 39.89 3.71
994 1034 1.301293 GGAAGCAACCCAGGAGGAG 59.699 63.158 0.00 0.00 39.89 3.69
995 1035 1.201429 GGAAGCAACCCAGGAGGAGA 61.201 60.000 0.00 0.00 39.89 3.71
996 1036 0.251634 GAAGCAACCCAGGAGGAGAG 59.748 60.000 0.00 0.00 39.89 3.20
1403 1449 4.301205 TCCTTCCATCCATGAGATCTCAA 58.699 43.478 28.40 13.55 43.58 3.02
1549 1601 1.270358 GGAACTCGGTCTTGAGCAACT 60.270 52.381 0.79 0.00 39.68 3.16
1550 1602 2.062519 GAACTCGGTCTTGAGCAACTC 58.937 52.381 0.79 0.00 39.68 3.01
1551 1603 0.039074 ACTCGGTCTTGAGCAACTCG 60.039 55.000 0.79 0.00 39.68 4.18
1552 1604 0.734253 CTCGGTCTTGAGCAACTCGG 60.734 60.000 0.79 0.00 32.35 4.63
1553 1605 1.176619 TCGGTCTTGAGCAACTCGGA 61.177 55.000 0.79 0.00 32.35 4.55
1554 1606 0.734253 CGGTCTTGAGCAACTCGGAG 60.734 60.000 2.83 2.83 32.35 4.63
1555 1607 1.016653 GGTCTTGAGCAACTCGGAGC 61.017 60.000 4.58 0.00 32.35 4.70
1556 1608 0.319900 GTCTTGAGCAACTCGGAGCA 60.320 55.000 4.58 0.00 32.35 4.26
1557 1609 0.610174 TCTTGAGCAACTCGGAGCAT 59.390 50.000 4.58 0.00 32.35 3.79
1558 1610 0.725686 CTTGAGCAACTCGGAGCATG 59.274 55.000 4.58 6.00 32.35 4.06
1559 1611 1.300971 TTGAGCAACTCGGAGCATGC 61.301 55.000 21.98 21.98 39.06 4.06
1560 1612 2.667418 AGCAACTCGGAGCATGCT 59.333 55.556 22.92 22.92 43.90 3.79
1561 1613 1.002868 AGCAACTCGGAGCATGCTT 60.003 52.632 23.61 5.39 46.36 3.91
1562 1614 1.136147 GCAACTCGGAGCATGCTTG 59.864 57.895 23.61 17.57 35.93 4.01
1563 1615 1.798735 CAACTCGGAGCATGCTTGG 59.201 57.895 23.61 16.60 0.00 3.61
1564 1616 0.674581 CAACTCGGAGCATGCTTGGA 60.675 55.000 23.61 19.85 0.00 3.53
1565 1617 0.254178 AACTCGGAGCATGCTTGGAT 59.746 50.000 23.61 5.51 0.00 3.41
1566 1618 1.123077 ACTCGGAGCATGCTTGGATA 58.877 50.000 23.61 5.38 0.00 2.59
1567 1619 1.202580 ACTCGGAGCATGCTTGGATAC 60.203 52.381 23.61 7.52 0.00 2.24
1568 1620 0.249447 TCGGAGCATGCTTGGATACG 60.249 55.000 23.61 18.13 42.51 3.06
1569 1621 0.530650 CGGAGCATGCTTGGATACGT 60.531 55.000 23.61 0.00 42.51 3.57
1570 1622 1.668419 GGAGCATGCTTGGATACGTT 58.332 50.000 23.61 0.00 42.51 3.99
1571 1623 2.017049 GGAGCATGCTTGGATACGTTT 58.983 47.619 23.61 0.00 42.51 3.60
1572 1624 2.423538 GGAGCATGCTTGGATACGTTTT 59.576 45.455 23.61 0.00 42.51 2.43
1573 1625 3.625764 GGAGCATGCTTGGATACGTTTTA 59.374 43.478 23.61 0.00 42.51 1.52
1574 1626 4.260784 GGAGCATGCTTGGATACGTTTTAG 60.261 45.833 23.61 0.00 42.51 1.85
1575 1627 4.261801 AGCATGCTTGGATACGTTTTAGT 58.738 39.130 16.30 0.00 42.51 2.24
1576 1628 4.332819 AGCATGCTTGGATACGTTTTAGTC 59.667 41.667 16.30 0.00 42.51 2.59
1577 1629 4.495844 GCATGCTTGGATACGTTTTAGTCC 60.496 45.833 11.37 0.00 42.51 3.85
1578 1630 3.602483 TGCTTGGATACGTTTTAGTCCC 58.398 45.455 0.00 0.00 42.51 4.46
1579 1631 3.008157 TGCTTGGATACGTTTTAGTCCCA 59.992 43.478 0.00 0.00 42.51 4.37
1580 1632 4.196971 GCTTGGATACGTTTTAGTCCCAT 58.803 43.478 0.00 0.00 42.51 4.00
1581 1633 4.035208 GCTTGGATACGTTTTAGTCCCATG 59.965 45.833 0.00 0.00 42.51 3.66
1582 1634 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
1583 1635 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
1585 1637 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
1596 1648 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
1599 1651 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
1600 1652 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
1601 1653 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
1602 1654 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
1603 1655 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
1604 1656 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
1605 1657 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
1606 1658 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
1607 1659 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
1608 1660 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
1609 1661 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
1610 1662 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
1611 1663 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
1612 1664 4.976540 AGTGGGACTAAAACTTGCTAGT 57.023 40.909 0.00 0.00 35.68 2.57
1613 1665 4.895961 AGTGGGACTAAAACTTGCTAGTC 58.104 43.478 0.07 0.62 42.17 2.59
1614 1666 4.593634 AGTGGGACTAAAACTTGCTAGTCT 59.406 41.667 0.07 0.00 42.42 3.24
1615 1667 4.930405 GTGGGACTAAAACTTGCTAGTCTC 59.070 45.833 0.07 1.39 43.29 3.36
1616 1668 5.148651 GGGACTAAAACTTGCTAGTCTCA 57.851 43.478 0.07 0.00 42.76 3.27
1617 1669 4.930405 GGGACTAAAACTTGCTAGTCTCAC 59.070 45.833 0.07 0.00 42.76 3.51
1618 1670 4.930405 GGACTAAAACTTGCTAGTCTCACC 59.070 45.833 0.07 0.00 42.42 4.02
1619 1671 4.895961 ACTAAAACTTGCTAGTCTCACCC 58.104 43.478 0.07 0.00 31.99 4.61
1620 1672 3.857157 AAAACTTGCTAGTCTCACCCA 57.143 42.857 0.07 0.00 31.99 4.51
1621 1673 4.373156 AAAACTTGCTAGTCTCACCCAT 57.627 40.909 0.07 0.00 31.99 4.00
1622 1674 3.340814 AACTTGCTAGTCTCACCCATG 57.659 47.619 0.07 0.00 31.99 3.66
1623 1675 1.065854 ACTTGCTAGTCTCACCCATGC 60.066 52.381 0.00 0.00 0.00 4.06
1624 1676 1.209019 CTTGCTAGTCTCACCCATGCT 59.791 52.381 0.00 0.00 0.00 3.79
1625 1677 1.279496 TGCTAGTCTCACCCATGCTT 58.721 50.000 0.00 0.00 0.00 3.91
1626 1678 1.065926 TGCTAGTCTCACCCATGCTTG 60.066 52.381 0.00 0.00 0.00 4.01
1627 1679 1.745141 GCTAGTCTCACCCATGCTTGG 60.745 57.143 11.68 11.68 43.23 3.61
1628 1680 1.833630 CTAGTCTCACCCATGCTTGGA 59.166 52.381 19.85 0.00 46.92 3.53
1629 1681 1.293062 AGTCTCACCCATGCTTGGAT 58.707 50.000 19.85 0.00 46.92 3.41
1630 1682 1.211457 AGTCTCACCCATGCTTGGATC 59.789 52.381 19.85 3.99 46.92 3.36
1631 1683 0.548031 TCTCACCCATGCTTGGATCC 59.452 55.000 19.85 4.20 46.92 3.36
1632 1684 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
1633 1685 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
1634 1686 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
1635 1687 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
1636 1688 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
1637 1689 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
1638 1690 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
1639 1691 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
1640 1692 5.139727 CCCATGCTTGGATCCAAATACTAA 58.860 41.667 26.87 10.11 46.92 2.24
1641 1693 5.598005 CCCATGCTTGGATCCAAATACTAAA 59.402 40.000 26.87 8.81 46.92 1.85
1642 1694 6.239120 CCCATGCTTGGATCCAAATACTAAAG 60.239 42.308 26.87 14.21 46.92 1.85
1643 1695 6.547141 CCATGCTTGGATCCAAATACTAAAGA 59.453 38.462 26.87 1.90 46.92 2.52
1644 1696 7.255381 CCATGCTTGGATCCAAATACTAAAGAG 60.255 40.741 26.87 12.80 46.92 2.85
1645 1697 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
1646 1698 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
1647 1699 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
1648 1700 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
1681 1733 9.866655 AGTTATTGAGCATTTATTATCCTCCAA 57.133 29.630 0.00 0.00 0.00 3.53
1684 1736 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
1685 1737 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
1686 1738 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
1687 1739 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
1688 1740 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
1689 1741 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
1690 1742 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
1691 1743 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
1692 1744 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
1693 1745 0.999712 TCCTCCAAACCCTCCAATCC 59.000 55.000 0.00 0.00 0.00 3.01
1694 1746 0.704076 CCTCCAAACCCTCCAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
1695 1747 1.341383 CCTCCAAACCCTCCAATCCAG 60.341 57.143 0.00 0.00 0.00 3.86
1696 1748 1.635487 CTCCAAACCCTCCAATCCAGA 59.365 52.381 0.00 0.00 0.00 3.86
1697 1749 2.041620 CTCCAAACCCTCCAATCCAGAA 59.958 50.000 0.00 0.00 0.00 3.02
1698 1750 2.171003 CCAAACCCTCCAATCCAGAAC 58.829 52.381 0.00 0.00 0.00 3.01
1699 1751 2.225117 CCAAACCCTCCAATCCAGAACT 60.225 50.000 0.00 0.00 0.00 3.01
1700 1752 3.010138 CCAAACCCTCCAATCCAGAACTA 59.990 47.826 0.00 0.00 0.00 2.24
1701 1753 4.508405 CCAAACCCTCCAATCCAGAACTAA 60.508 45.833 0.00 0.00 0.00 2.24
1702 1754 4.576330 AACCCTCCAATCCAGAACTAAG 57.424 45.455 0.00 0.00 0.00 2.18
1703 1755 2.846827 ACCCTCCAATCCAGAACTAAGG 59.153 50.000 0.00 0.00 0.00 2.69
1704 1756 3.115390 CCCTCCAATCCAGAACTAAGGA 58.885 50.000 0.00 0.00 38.50 3.36
1705 1757 3.135530 CCCTCCAATCCAGAACTAAGGAG 59.864 52.174 0.00 0.00 40.58 3.69
1706 1758 4.033709 CCTCCAATCCAGAACTAAGGAGA 58.966 47.826 7.12 0.00 42.87 3.71
1707 1759 4.100808 CCTCCAATCCAGAACTAAGGAGAG 59.899 50.000 7.12 0.00 42.87 3.20
1708 1760 4.033709 TCCAATCCAGAACTAAGGAGAGG 58.966 47.826 0.00 0.00 37.34 3.69
1709 1761 4.033709 CCAATCCAGAACTAAGGAGAGGA 58.966 47.826 0.00 0.00 37.34 3.71
1710 1762 4.471386 CCAATCCAGAACTAAGGAGAGGAA 59.529 45.833 0.00 0.00 37.34 3.36
1711 1763 5.131809 CCAATCCAGAACTAAGGAGAGGAAT 59.868 44.000 0.00 0.00 37.34 3.01
1712 1764 6.353429 CCAATCCAGAACTAAGGAGAGGAATT 60.353 42.308 0.00 0.00 37.34 2.17
1713 1765 7.147479 CCAATCCAGAACTAAGGAGAGGAATTA 60.147 40.741 0.00 0.00 37.34 1.40
1714 1766 7.996758 ATCCAGAACTAAGGAGAGGAATTAA 57.003 36.000 0.00 0.00 37.34 1.40
1715 1767 7.808279 TCCAGAACTAAGGAGAGGAATTAAA 57.192 36.000 0.00 0.00 0.00 1.52
1716 1768 8.393959 TCCAGAACTAAGGAGAGGAATTAAAT 57.606 34.615 0.00 0.00 0.00 1.40
1717 1769 8.267894 TCCAGAACTAAGGAGAGGAATTAAATG 58.732 37.037 0.00 0.00 0.00 2.32
1718 1770 8.267894 CCAGAACTAAGGAGAGGAATTAAATGA 58.732 37.037 0.00 0.00 0.00 2.57
1719 1771 9.323985 CAGAACTAAGGAGAGGAATTAAATGAG 57.676 37.037 0.00 0.00 0.00 2.90
1720 1772 8.490311 AGAACTAAGGAGAGGAATTAAATGAGG 58.510 37.037 0.00 0.00 0.00 3.86
1721 1773 7.996758 ACTAAGGAGAGGAATTAAATGAGGA 57.003 36.000 0.00 0.00 0.00 3.71
1722 1774 8.028652 ACTAAGGAGAGGAATTAAATGAGGAG 57.971 38.462 0.00 0.00 0.00 3.69
1723 1775 7.846823 ACTAAGGAGAGGAATTAAATGAGGAGA 59.153 37.037 0.00 0.00 0.00 3.71
1724 1776 6.745794 AGGAGAGGAATTAAATGAGGAGAG 57.254 41.667 0.00 0.00 0.00 3.20
1725 1777 6.448202 AGGAGAGGAATTAAATGAGGAGAGA 58.552 40.000 0.00 0.00 0.00 3.10
1726 1778 6.554605 AGGAGAGGAATTAAATGAGGAGAGAG 59.445 42.308 0.00 0.00 0.00 3.20
1727 1779 6.553100 GGAGAGGAATTAAATGAGGAGAGAGA 59.447 42.308 0.00 0.00 0.00 3.10
1728 1780 7.255942 GGAGAGGAATTAAATGAGGAGAGAGAG 60.256 44.444 0.00 0.00 0.00 3.20
1729 1781 7.361438 AGAGGAATTAAATGAGGAGAGAGAGA 58.639 38.462 0.00 0.00 0.00 3.10
1730 1782 7.506938 AGAGGAATTAAATGAGGAGAGAGAGAG 59.493 40.741 0.00 0.00 0.00 3.20
1731 1783 6.041979 AGGAATTAAATGAGGAGAGAGAGAGC 59.958 42.308 0.00 0.00 0.00 4.09
1732 1784 6.041979 GGAATTAAATGAGGAGAGAGAGAGCT 59.958 42.308 0.00 0.00 0.00 4.09
1733 1785 7.232534 GGAATTAAATGAGGAGAGAGAGAGCTA 59.767 40.741 0.00 0.00 0.00 3.32
1734 1786 8.546083 AATTAAATGAGGAGAGAGAGAGCTAA 57.454 34.615 0.00 0.00 0.00 3.09
1735 1787 8.725606 ATTAAATGAGGAGAGAGAGAGCTAAT 57.274 34.615 0.00 0.00 0.00 1.73
1736 1788 9.821240 ATTAAATGAGGAGAGAGAGAGCTAATA 57.179 33.333 0.00 0.00 0.00 0.98
1737 1789 7.524717 AAATGAGGAGAGAGAGAGCTAATAC 57.475 40.000 0.00 0.00 0.00 1.89
1738 1790 5.638530 TGAGGAGAGAGAGAGCTAATACA 57.361 43.478 0.00 0.00 0.00 2.29
1739 1791 6.199557 TGAGGAGAGAGAGAGCTAATACAT 57.800 41.667 0.00 0.00 0.00 2.29
1740 1792 7.323052 TGAGGAGAGAGAGAGCTAATACATA 57.677 40.000 0.00 0.00 0.00 2.29
1741 1793 7.927788 TGAGGAGAGAGAGAGCTAATACATAT 58.072 38.462 0.00 0.00 0.00 1.78
1742 1794 8.390143 TGAGGAGAGAGAGAGCTAATACATATT 58.610 37.037 0.00 0.00 0.00 1.28
1743 1795 9.243105 GAGGAGAGAGAGAGCTAATACATATTT 57.757 37.037 0.00 0.00 0.00 1.40
1744 1796 9.600432 AGGAGAGAGAGAGCTAATACATATTTT 57.400 33.333 0.00 0.00 0.00 1.82
1761 1813 8.747538 ACATATTTTAGTAGGTTTCCCATGAC 57.252 34.615 0.00 0.00 0.00 3.06
1762 1814 8.557450 ACATATTTTAGTAGGTTTCCCATGACT 58.443 33.333 0.00 0.00 0.00 3.41
1766 1818 9.816787 ATTTTAGTAGGTTTCCCATGACTAAAA 57.183 29.630 19.00 19.00 45.07 1.52
1767 1819 8.857694 TTTAGTAGGTTTCCCATGACTAAAAG 57.142 34.615 8.74 0.00 38.44 2.27
1768 1820 6.697641 AGTAGGTTTCCCATGACTAAAAGA 57.302 37.500 0.00 0.00 0.00 2.52
1769 1821 7.272144 AGTAGGTTTCCCATGACTAAAAGAT 57.728 36.000 0.00 0.00 0.00 2.40
1770 1822 7.699878 AGTAGGTTTCCCATGACTAAAAGATT 58.300 34.615 0.00 0.00 0.00 2.40
1771 1823 8.170730 AGTAGGTTTCCCATGACTAAAAGATTT 58.829 33.333 0.00 0.00 0.00 2.17
1772 1824 7.855784 AGGTTTCCCATGACTAAAAGATTTT 57.144 32.000 0.00 0.00 0.00 1.82
1773 1825 8.950007 AGGTTTCCCATGACTAAAAGATTTTA 57.050 30.769 0.00 0.00 0.00 1.52
1787 1839 9.660180 CTAAAAGATTTTAGCCTCAAGACTAGT 57.340 33.333 11.10 0.00 41.97 2.57
1788 1840 8.554835 AAAAGATTTTAGCCTCAAGACTAGTC 57.445 34.615 15.41 15.41 0.00 2.59
1789 1841 6.228616 AGATTTTAGCCTCAAGACTAGTCC 57.771 41.667 19.38 2.89 0.00 3.85
1790 1842 5.961421 AGATTTTAGCCTCAAGACTAGTCCT 59.039 40.000 19.38 10.36 0.00 3.85
1791 1843 7.126733 AGATTTTAGCCTCAAGACTAGTCCTA 58.873 38.462 19.38 9.39 0.00 2.94
1792 1844 6.777213 TTTTAGCCTCAAGACTAGTCCTAG 57.223 41.667 19.38 13.33 39.04 3.02
1793 1845 2.661718 AGCCTCAAGACTAGTCCTAGC 58.338 52.381 19.38 14.54 36.66 3.42
1794 1846 1.684450 GCCTCAAGACTAGTCCTAGCC 59.316 57.143 19.38 0.89 36.66 3.93
1795 1847 2.688515 GCCTCAAGACTAGTCCTAGCCT 60.689 54.545 19.38 0.00 36.66 4.58
1796 1848 3.219281 CCTCAAGACTAGTCCTAGCCTC 58.781 54.545 19.38 0.00 36.66 4.70
1797 1849 3.117663 CCTCAAGACTAGTCCTAGCCTCT 60.118 52.174 19.38 0.00 36.66 3.69
1798 1850 4.134563 CTCAAGACTAGTCCTAGCCTCTC 58.865 52.174 19.38 0.00 36.66 3.20
1799 1851 3.783642 TCAAGACTAGTCCTAGCCTCTCT 59.216 47.826 19.38 0.00 36.66 3.10
1800 1852 4.228666 TCAAGACTAGTCCTAGCCTCTCTT 59.771 45.833 19.38 0.17 36.66 2.85
1801 1853 4.873724 AGACTAGTCCTAGCCTCTCTTT 57.126 45.455 19.38 0.00 36.66 2.52
1802 1854 5.979656 AGACTAGTCCTAGCCTCTCTTTA 57.020 43.478 19.38 0.00 36.66 1.85
1803 1855 5.937111 AGACTAGTCCTAGCCTCTCTTTAG 58.063 45.833 19.38 0.00 36.66 1.85
1804 1856 5.430745 AGACTAGTCCTAGCCTCTCTTTAGT 59.569 44.000 19.38 0.00 36.66 2.24
1805 1857 5.687780 ACTAGTCCTAGCCTCTCTTTAGTC 58.312 45.833 1.22 0.00 36.66 2.59
1806 1858 4.594675 AGTCCTAGCCTCTCTTTAGTCA 57.405 45.455 0.00 0.00 0.00 3.41
1807 1859 4.532834 AGTCCTAGCCTCTCTTTAGTCAG 58.467 47.826 0.00 0.00 0.00 3.51
1808 1860 3.634910 GTCCTAGCCTCTCTTTAGTCAGG 59.365 52.174 0.00 0.00 0.00 3.86
1809 1861 2.962421 CCTAGCCTCTCTTTAGTCAGGG 59.038 54.545 0.00 0.00 0.00 4.45
1810 1862 1.872773 AGCCTCTCTTTAGTCAGGGG 58.127 55.000 0.00 0.00 0.00 4.79
1811 1863 1.079658 AGCCTCTCTTTAGTCAGGGGT 59.920 52.381 0.00 0.00 0.00 4.95
1812 1864 1.208293 GCCTCTCTTTAGTCAGGGGTG 59.792 57.143 0.00 0.00 0.00 4.61
1813 1865 1.208293 CCTCTCTTTAGTCAGGGGTGC 59.792 57.143 0.00 0.00 0.00 5.01
1814 1866 2.183679 CTCTCTTTAGTCAGGGGTGCT 58.816 52.381 0.00 0.00 0.00 4.40
1815 1867 2.569404 CTCTCTTTAGTCAGGGGTGCTT 59.431 50.000 0.00 0.00 0.00 3.91
1816 1868 2.303022 TCTCTTTAGTCAGGGGTGCTTG 59.697 50.000 0.00 0.00 0.00 4.01
1817 1869 1.351017 TCTTTAGTCAGGGGTGCTTGG 59.649 52.381 0.00 0.00 0.00 3.61
1818 1870 1.351017 CTTTAGTCAGGGGTGCTTGGA 59.649 52.381 0.00 0.00 0.00 3.53
1819 1871 1.440618 TTAGTCAGGGGTGCTTGGAA 58.559 50.000 0.00 0.00 0.00 3.53
1820 1872 0.690762 TAGTCAGGGGTGCTTGGAAC 59.309 55.000 0.00 0.00 0.00 3.62
1821 1873 1.062488 AGTCAGGGGTGCTTGGAACT 61.062 55.000 0.00 0.00 0.00 3.01
1822 1874 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.000 0.00 0.00 0.00 2.66
1823 1875 0.555769 TCAGGGGTGCTTGGAACTTT 59.444 50.000 0.00 0.00 0.00 2.66
1824 1876 1.777878 TCAGGGGTGCTTGGAACTTTA 59.222 47.619 0.00 0.00 0.00 1.85
1825 1877 2.162681 CAGGGGTGCTTGGAACTTTAG 58.837 52.381 0.00 0.00 0.00 1.85
1826 1878 0.888619 GGGGTGCTTGGAACTTTAGC 59.111 55.000 0.00 0.00 35.50 3.09
1827 1879 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.000 0.00 0.00 34.03 3.93
1828 1880 1.547901 GGGTGCTTGGAACTTTAGCCT 60.548 52.381 0.00 0.00 34.03 4.58
1829 1881 1.813178 GGTGCTTGGAACTTTAGCCTC 59.187 52.381 0.00 0.00 34.03 4.70
1830 1882 2.553247 GGTGCTTGGAACTTTAGCCTCT 60.553 50.000 0.00 0.00 34.03 3.69
1831 1883 3.307480 GGTGCTTGGAACTTTAGCCTCTA 60.307 47.826 0.00 0.00 34.03 2.43
1832 1884 4.324267 GTGCTTGGAACTTTAGCCTCTAA 58.676 43.478 0.00 0.00 34.03 2.10
1833 1885 4.760204 GTGCTTGGAACTTTAGCCTCTAAA 59.240 41.667 0.00 0.00 34.03 1.85
1834 1886 5.240844 GTGCTTGGAACTTTAGCCTCTAAAA 59.759 40.000 0.00 0.00 34.03 1.52
1835 1887 5.473504 TGCTTGGAACTTTAGCCTCTAAAAG 59.526 40.000 0.00 0.00 38.41 2.27
1836 1888 5.705905 GCTTGGAACTTTAGCCTCTAAAAGA 59.294 40.000 2.08 0.00 36.43 2.52
1837 1889 6.128145 GCTTGGAACTTTAGCCTCTAAAAGAG 60.128 42.308 2.08 0.00 41.96 2.85
1838 1890 6.681729 TGGAACTTTAGCCTCTAAAAGAGA 57.318 37.500 5.50 0.00 45.07 3.10
1839 1891 6.465084 TGGAACTTTAGCCTCTAAAAGAGAC 58.535 40.000 5.50 0.00 45.07 3.36
1840 1892 6.270231 TGGAACTTTAGCCTCTAAAAGAGACT 59.730 38.462 5.50 1.89 45.07 3.24
1841 1893 7.453752 TGGAACTTTAGCCTCTAAAAGAGACTA 59.546 37.037 5.50 0.91 45.07 2.59
1842 1894 8.479689 GGAACTTTAGCCTCTAAAAGAGACTAT 58.520 37.037 5.50 0.00 45.07 2.12
1843 1895 9.878667 GAACTTTAGCCTCTAAAAGAGACTATT 57.121 33.333 5.50 0.00 45.07 1.73
1850 1902 9.878667 AGCCTCTAAAAGAGACTATTTTTAGTC 57.121 33.333 12.70 5.24 45.07 2.59
1851 1903 9.654663 GCCTCTAAAAGAGACTATTTTTAGTCA 57.345 33.333 12.70 4.01 45.07 3.41
1870 1922 9.720769 TTTAGTCAGACTAAAAATAGTCCCTTG 57.279 33.333 26.93 5.29 44.84 3.61
1871 1923 7.317722 AGTCAGACTAAAAATAGTCCCTTGT 57.682 36.000 0.00 0.00 45.66 3.16
1872 1924 8.431910 AGTCAGACTAAAAATAGTCCCTTGTA 57.568 34.615 0.00 0.00 45.66 2.41
1873 1925 9.047947 AGTCAGACTAAAAATAGTCCCTTGTAT 57.952 33.333 0.00 0.00 45.66 2.29
1874 1926 9.315525 GTCAGACTAAAAATAGTCCCTTGTATC 57.684 37.037 11.35 0.00 45.66 2.24
1875 1927 8.483758 TCAGACTAAAAATAGTCCCTTGTATCC 58.516 37.037 11.35 0.00 45.66 2.59
1876 1928 8.265055 CAGACTAAAAATAGTCCCTTGTATCCA 58.735 37.037 11.35 0.00 45.66 3.41
1877 1929 8.832735 AGACTAAAAATAGTCCCTTGTATCCAA 58.167 33.333 11.35 0.00 45.66 3.53
1878 1930 9.110502 GACTAAAAATAGTCCCTTGTATCCAAG 57.889 37.037 4.96 0.00 40.86 3.61
1879 1931 6.775594 AAAAATAGTCCCTTGTATCCAAGC 57.224 37.500 0.00 0.00 45.57 4.01
1880 1932 5.450818 AAATAGTCCCTTGTATCCAAGCA 57.549 39.130 0.00 0.00 45.57 3.91
1881 1933 2.789409 AGTCCCTTGTATCCAAGCAC 57.211 50.000 0.00 0.00 45.57 4.40
1882 1934 1.282157 AGTCCCTTGTATCCAAGCACC 59.718 52.381 0.00 0.00 45.57 5.01
1883 1935 0.623723 TCCCTTGTATCCAAGCACCC 59.376 55.000 0.00 0.00 45.57 4.61
1884 1936 0.625849 CCCTTGTATCCAAGCACCCT 59.374 55.000 0.00 0.00 45.57 4.34
1885 1937 1.408822 CCCTTGTATCCAAGCACCCTC 60.409 57.143 0.00 0.00 45.57 4.30
1912 1964 0.831711 GGTTGCTTGATGTGGGGGTT 60.832 55.000 0.00 0.00 0.00 4.11
2009 2063 2.304761 TGGAAATACGGCAGGAGTTTCT 59.695 45.455 9.38 0.00 0.00 2.52
2145 2201 9.528018 GAACAACTTTTCTGGAAATGTCATAAA 57.472 29.630 12.66 0.00 37.59 1.40
2227 2284 5.857471 TTGCCCTTCAAGATTCAATATGG 57.143 39.130 0.00 0.00 0.00 2.74
2238 2295 7.835682 TCAAGATTCAATATGGACATGGAGTTT 59.164 33.333 0.00 0.00 0.00 2.66
2246 2303 2.028476 TGGACATGGAGTTTACAGGACG 60.028 50.000 0.00 0.00 0.00 4.79
2295 2352 6.317140 ACATGGAATTAACTGCATGACTACAG 59.683 38.462 22.70 0.00 45.23 2.74
2437 2494 3.435105 ACAAAGCGCAAACAAAGATGA 57.565 38.095 11.47 0.00 0.00 2.92
2482 2540 1.139058 AGTGTTTTCGGTGTCTCAGCT 59.861 47.619 0.00 0.00 0.00 4.24
2509 2567 0.035534 TGCAATGCACCTACGATGGT 60.036 50.000 2.72 0.00 41.77 3.55
3147 3209 5.567037 ATGCTAGAAACATAGCCATGGTA 57.433 39.130 14.67 5.06 46.27 3.25
3178 3240 4.633126 CCAACATGACTCAGGTAATCACTG 59.367 45.833 0.00 0.00 37.30 3.66
3183 3245 4.910195 TGACTCAGGTAATCACTGCATTT 58.090 39.130 0.00 0.00 35.94 2.32
3268 3330 0.456653 GCAAGTTGCCCATTACTGCG 60.457 55.000 17.36 0.00 37.42 5.18
3581 3643 1.014352 ACAACACCTGTTTCGACAGC 58.986 50.000 1.11 0.00 32.99 4.40
3614 3676 2.370445 CCATCCCCTCACCGAAGCT 61.370 63.158 0.00 0.00 0.00 3.74
3623 3685 1.819288 CTCACCGAAGCTGAAGAGGTA 59.181 52.381 0.00 0.00 33.30 3.08
3656 3718 1.801178 CTGGAAAGCCAACTCGAAGAC 59.199 52.381 0.00 0.00 45.41 3.01
3679 3741 1.140312 AGACCAGAGGGAAGCACAAA 58.860 50.000 0.00 0.00 38.05 2.83
3683 3745 1.610522 CCAGAGGGAAGCACAAACAAG 59.389 52.381 0.00 0.00 35.59 3.16
3688 3750 0.936297 GGAAGCACAAACAAGCAGCG 60.936 55.000 0.00 0.00 0.00 5.18
3734 3796 1.639722 TGGAGGACGATCAACCTGAA 58.360 50.000 11.67 0.00 36.57 3.02
3756 3818 3.319122 ACTGAAATCTGAAACCAAGGCAC 59.681 43.478 0.00 0.00 0.00 5.01
3770 3832 1.885049 AGGCACTGGAGGACATACAT 58.115 50.000 0.00 0.00 37.18 2.29
3809 3874 8.579850 AAGGTGCAGAGTTATTGAAATGATAA 57.420 30.769 0.00 0.00 0.00 1.75
3905 3970 5.572896 GGTTGAAATGTATTGCTTGTAGTGC 59.427 40.000 0.00 0.00 0.00 4.40
3929 3994 2.175878 ACTTAACTCTGCTGGTGCTG 57.824 50.000 0.00 0.00 40.48 4.41
3930 3995 1.417890 ACTTAACTCTGCTGGTGCTGT 59.582 47.619 0.00 0.00 40.48 4.40
4003 4068 4.009675 GGATTCACTGCTGTATGGTCAAA 58.990 43.478 0.00 0.00 0.00 2.69
4147 4212 1.100510 TATGGTGCTAACGAGACGCT 58.899 50.000 0.00 0.00 0.00 5.07
4176 4241 2.568956 AGCAGTGAGATGGCTTCAGTAA 59.431 45.455 0.00 0.00 33.21 2.24
4234 4299 1.525619 AGCGAAACACGTTGCTAAGTC 59.474 47.619 0.00 0.00 44.60 3.01
4242 4307 3.428870 ACACGTTGCTAAGTCTGAAATCG 59.571 43.478 0.00 0.00 0.00 3.34
4253 4318 5.695851 AGTCTGAAATCGCAGTGAAAAAT 57.304 34.783 0.00 0.00 37.20 1.82
4328 4562 9.387257 TGTAGAACTCGTCATCTGTAATAGTTA 57.613 33.333 0.00 0.00 0.00 2.24
4335 4569 7.649057 TCGTCATCTGTAATAGTTACCTGATG 58.351 38.462 17.30 17.30 41.76 3.07
4349 4583 7.287810 AGTTACCTGATGTTACTTTTCCAGTT 58.712 34.615 0.00 0.00 33.16 3.16
4482 4729 0.392595 CCCAGTTACTTTCCCCTCGC 60.393 60.000 0.00 0.00 0.00 5.03
4573 4820 3.496331 ACCAGTGTTATGTTTCCCCTTG 58.504 45.455 0.00 0.00 0.00 3.61
4625 4872 6.376018 GGTGTTGTTTAGTATTTGCCTATCCA 59.624 38.462 0.00 0.00 0.00 3.41
4740 4987 1.296715 GGCTCATCAACGAGGGTGT 59.703 57.895 0.00 0.00 33.36 4.16
4745 4992 1.066215 TCATCAACGAGGGTGTGGATG 60.066 52.381 5.14 5.14 34.18 3.51
4802 5049 2.838202 TCTCAGGCTAAACCAGGTTAGG 59.162 50.000 4.87 2.65 43.14 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.246619 GTGTAAGAGTAGAGCACACTGC 58.753 50.000 0.00 0.00 45.46 4.40
1 2 4.505313 TGTGTAAGAGTAGAGCACACTG 57.495 45.455 4.95 0.00 40.08 3.66
2 3 4.021894 CCTTGTGTAAGAGTAGAGCACACT 60.022 45.833 4.95 0.00 39.39 3.55
3 4 4.238514 CCTTGTGTAAGAGTAGAGCACAC 58.761 47.826 0.00 0.00 39.39 3.82
4 5 3.258372 CCCTTGTGTAAGAGTAGAGCACA 59.742 47.826 0.00 0.00 38.15 4.57
5 6 3.510360 TCCCTTGTGTAAGAGTAGAGCAC 59.490 47.826 0.00 0.00 35.92 4.40
6 7 3.764434 CTCCCTTGTGTAAGAGTAGAGCA 59.236 47.826 0.00 0.00 35.92 4.26
7 8 3.764972 ACTCCCTTGTGTAAGAGTAGAGC 59.235 47.826 0.00 0.00 35.92 4.09
8 9 8.927675 ATATACTCCCTTGTGTAAGAGTAGAG 57.072 38.462 5.15 0.00 35.92 2.43
12 13 9.756571 CCTATATATACTCCCTTGTGTAAGAGT 57.243 37.037 0.00 0.00 35.92 3.24
13 14 8.688151 GCCTATATATACTCCCTTGTGTAAGAG 58.312 40.741 0.00 0.00 35.92 2.85
14 15 8.174757 TGCCTATATATACTCCCTTGTGTAAGA 58.825 37.037 0.00 0.00 35.92 2.10
15 16 8.251721 GTGCCTATATATACTCCCTTGTGTAAG 58.748 40.741 0.00 0.00 0.00 2.34
16 17 7.731235 TGTGCCTATATATACTCCCTTGTGTAA 59.269 37.037 0.00 0.00 0.00 2.41
17 18 7.243091 TGTGCCTATATATACTCCCTTGTGTA 58.757 38.462 0.00 0.00 0.00 2.90
18 19 6.082031 TGTGCCTATATATACTCCCTTGTGT 58.918 40.000 0.00 0.00 0.00 3.72
19 20 6.605471 TGTGCCTATATATACTCCCTTGTG 57.395 41.667 0.00 0.00 0.00 3.33
20 21 6.959954 TGATGTGCCTATATATACTCCCTTGT 59.040 38.462 0.00 0.00 0.00 3.16
21 22 7.423844 TGATGTGCCTATATATACTCCCTTG 57.576 40.000 0.00 0.00 0.00 3.61
22 23 8.489489 CAATGATGTGCCTATATATACTCCCTT 58.511 37.037 0.00 0.00 0.00 3.95
23 24 7.071698 CCAATGATGTGCCTATATATACTCCCT 59.928 40.741 0.00 0.00 0.00 4.20
24 25 7.147479 ACCAATGATGTGCCTATATATACTCCC 60.147 40.741 0.00 0.00 0.00 4.30
25 26 7.796054 ACCAATGATGTGCCTATATATACTCC 58.204 38.462 0.00 0.00 0.00 3.85
26 27 7.928706 GGACCAATGATGTGCCTATATATACTC 59.071 40.741 0.00 0.00 0.00 2.59
27 28 7.147479 GGGACCAATGATGTGCCTATATATACT 60.147 40.741 0.00 0.00 40.70 2.12
28 29 6.992715 GGGACCAATGATGTGCCTATATATAC 59.007 42.308 0.00 0.00 40.70 1.47
29 30 6.183360 CGGGACCAATGATGTGCCTATATATA 60.183 42.308 0.00 0.00 41.62 0.86
30 31 5.396772 CGGGACCAATGATGTGCCTATATAT 60.397 44.000 0.00 0.00 41.62 0.86
31 32 4.081142 CGGGACCAATGATGTGCCTATATA 60.081 45.833 0.00 0.00 41.62 0.86
32 33 3.307691 CGGGACCAATGATGTGCCTATAT 60.308 47.826 0.00 0.00 41.62 0.86
33 34 2.038426 CGGGACCAATGATGTGCCTATA 59.962 50.000 0.00 0.00 41.62 1.31
34 35 1.202806 CGGGACCAATGATGTGCCTAT 60.203 52.381 0.00 0.00 41.62 2.57
35 36 0.180171 CGGGACCAATGATGTGCCTA 59.820 55.000 0.00 0.00 41.62 3.93
36 37 1.077501 CGGGACCAATGATGTGCCT 60.078 57.895 0.00 0.00 41.62 4.75
37 38 2.120909 CCGGGACCAATGATGTGCC 61.121 63.158 0.00 0.00 40.50 5.01
38 39 0.965363 AACCGGGACCAATGATGTGC 60.965 55.000 6.32 0.00 0.00 4.57
39 40 0.810648 CAACCGGGACCAATGATGTG 59.189 55.000 6.32 0.00 0.00 3.21
40 41 0.323360 CCAACCGGGACCAATGATGT 60.323 55.000 6.32 0.00 40.01 3.06
41 42 0.323360 ACCAACCGGGACCAATGATG 60.323 55.000 6.32 0.00 41.15 3.07
42 43 0.323360 CACCAACCGGGACCAATGAT 60.323 55.000 6.32 0.00 41.15 2.45
43 44 1.074072 CACCAACCGGGACCAATGA 59.926 57.895 6.32 0.00 41.15 2.57
44 45 1.976474 CCACCAACCGGGACCAATG 60.976 63.158 6.32 0.00 41.15 2.82
45 46 2.438795 CCACCAACCGGGACCAAT 59.561 61.111 6.32 0.00 41.15 3.16
46 47 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
48 49 4.360405 ATGCCACCAACCGGGACC 62.360 66.667 6.32 0.00 41.15 4.46
49 50 3.061848 CATGCCACCAACCGGGAC 61.062 66.667 6.32 0.00 41.15 4.46
50 51 2.835049 TTCATGCCACCAACCGGGA 61.835 57.895 6.32 0.00 41.15 5.14
51 52 2.282816 TTCATGCCACCAACCGGG 60.283 61.111 6.32 0.00 44.81 5.73
52 53 2.635443 GGTTCATGCCACCAACCGG 61.635 63.158 0.00 0.00 34.04 5.28
53 54 2.961768 GGTTCATGCCACCAACCG 59.038 61.111 8.62 0.00 34.04 4.44
54 55 1.586154 CTCGGTTCATGCCACCAACC 61.586 60.000 12.84 8.51 36.91 3.77
55 56 0.605319 TCTCGGTTCATGCCACCAAC 60.605 55.000 12.84 0.99 33.36 3.77
56 57 0.605319 GTCTCGGTTCATGCCACCAA 60.605 55.000 12.84 0.00 33.36 3.67
57 58 1.003839 GTCTCGGTTCATGCCACCA 60.004 57.895 12.84 1.96 33.36 4.17
58 59 0.535335 TAGTCTCGGTTCATGCCACC 59.465 55.000 4.21 4.21 0.00 4.61
59 60 2.380084 TTAGTCTCGGTTCATGCCAC 57.620 50.000 0.00 0.00 0.00 5.01
60 61 2.354704 CCTTTAGTCTCGGTTCATGCCA 60.355 50.000 0.00 0.00 0.00 4.92
61 62 2.280628 CCTTTAGTCTCGGTTCATGCC 58.719 52.381 0.00 0.00 0.00 4.40
62 63 2.280628 CCCTTTAGTCTCGGTTCATGC 58.719 52.381 0.00 0.00 0.00 4.06
63 64 2.280628 GCCCTTTAGTCTCGGTTCATG 58.719 52.381 0.00 0.00 0.00 3.07
64 65 1.906574 TGCCCTTTAGTCTCGGTTCAT 59.093 47.619 0.00 0.00 0.00 2.57
65 66 1.275291 CTGCCCTTTAGTCTCGGTTCA 59.725 52.381 0.00 0.00 0.00 3.18
66 67 2.007547 GCTGCCCTTTAGTCTCGGTTC 61.008 57.143 0.00 0.00 0.00 3.62
67 68 0.036294 GCTGCCCTTTAGTCTCGGTT 60.036 55.000 0.00 0.00 0.00 4.44
68 69 1.597461 GCTGCCCTTTAGTCTCGGT 59.403 57.895 0.00 0.00 0.00 4.69
69 70 1.153349 GGCTGCCCTTTAGTCTCGG 60.153 63.158 7.66 0.00 0.00 4.63
70 71 1.901085 AGGCTGCCCTTTAGTCTCG 59.099 57.895 16.57 0.00 38.74 4.04
79 80 3.984732 GGGACCAAAGGCTGCCCT 61.985 66.667 16.57 0.00 45.77 5.19
82 83 4.660938 ACCGGGACCAAAGGCTGC 62.661 66.667 6.32 0.00 0.00 5.25
83 84 1.971695 GAACCGGGACCAAAGGCTG 60.972 63.158 6.32 0.00 0.00 4.85
84 85 2.002018 TTGAACCGGGACCAAAGGCT 62.002 55.000 6.32 0.00 0.00 4.58
85 86 1.524008 CTTGAACCGGGACCAAAGGC 61.524 60.000 6.32 0.00 0.00 4.35
86 87 1.524008 GCTTGAACCGGGACCAAAGG 61.524 60.000 6.32 0.00 0.00 3.11
87 88 1.524008 GGCTTGAACCGGGACCAAAG 61.524 60.000 6.32 3.29 0.00 2.77
88 89 1.529713 GGCTTGAACCGGGACCAAA 60.530 57.895 6.32 0.00 0.00 3.28
89 90 2.114411 GGCTTGAACCGGGACCAA 59.886 61.111 6.32 5.81 0.00 3.67
90 91 3.172106 TGGCTTGAACCGGGACCA 61.172 61.111 6.32 0.26 0.00 4.02
91 92 2.671963 GTGGCTTGAACCGGGACC 60.672 66.667 6.32 0.00 0.00 4.46
92 93 2.671963 GGTGGCTTGAACCGGGAC 60.672 66.667 6.32 0.00 0.00 4.46
93 94 2.758207 TTGGTGGCTTGAACCGGGA 61.758 57.895 6.32 0.00 40.86 5.14
94 95 2.203422 TTGGTGGCTTGAACCGGG 60.203 61.111 6.32 0.00 40.86 5.73
95 96 2.561037 GGTTGGTGGCTTGAACCGG 61.561 63.158 0.00 0.00 40.86 5.28
96 97 3.039134 GGTTGGTGGCTTGAACCG 58.961 61.111 0.00 0.00 40.86 4.44
97 98 2.561037 CCGGTTGGTGGCTTGAACC 61.561 63.158 0.00 0.00 38.26 3.62
98 99 2.561037 CCCGGTTGGTGGCTTGAAC 61.561 63.158 0.00 0.00 0.00 3.18
99 100 2.203422 CCCGGTTGGTGGCTTGAA 60.203 61.111 0.00 0.00 0.00 2.69
100 101 3.172106 TCCCGGTTGGTGGCTTGA 61.172 61.111 0.00 0.00 34.77 3.02
101 102 2.983592 GTCCCGGTTGGTGGCTTG 60.984 66.667 0.00 0.00 34.77 4.01
102 103 4.280019 GGTCCCGGTTGGTGGCTT 62.280 66.667 0.00 0.00 34.77 4.35
104 105 3.879180 ATTGGTCCCGGTTGGTGGC 62.879 63.158 0.00 0.00 34.77 5.01
105 106 1.976474 CATTGGTCCCGGTTGGTGG 60.976 63.158 0.00 0.00 34.77 4.61
106 107 1.976474 CCATTGGTCCCGGTTGGTG 60.976 63.158 0.00 0.00 34.77 4.17
107 108 2.438795 CCATTGGTCCCGGTTGGT 59.561 61.111 0.00 0.00 34.77 3.67
108 109 1.976474 CACCATTGGTCCCGGTTGG 60.976 63.158 5.04 0.00 31.02 3.77
109 110 1.976474 CCACCATTGGTCCCGGTTG 60.976 63.158 5.04 0.00 38.23 3.77
110 111 2.438795 CCACCATTGGTCCCGGTT 59.561 61.111 5.04 0.00 38.23 4.44
118 119 4.517663 TGGCTTGACCACCATTGG 57.482 55.556 0.00 0.00 46.36 3.16
126 127 2.969300 TTCCGGTTGGTGGCTTGACC 62.969 60.000 0.00 0.00 39.84 4.02
127 128 1.527380 TTCCGGTTGGTGGCTTGAC 60.527 57.895 0.00 0.00 36.30 3.18
128 129 1.527380 GTTCCGGTTGGTGGCTTGA 60.527 57.895 0.00 0.00 36.30 3.02
129 130 2.561037 GGTTCCGGTTGGTGGCTTG 61.561 63.158 0.00 0.00 36.30 4.01
130 131 2.203437 GGTTCCGGTTGGTGGCTT 60.203 61.111 0.00 0.00 36.30 4.35
131 132 2.366153 ATTGGTTCCGGTTGGTGGCT 62.366 55.000 0.00 0.00 36.30 4.75
132 133 1.906333 ATTGGTTCCGGTTGGTGGC 60.906 57.895 0.00 0.00 36.30 5.01
133 134 0.538516 TCATTGGTTCCGGTTGGTGG 60.539 55.000 0.00 0.00 36.30 4.61
134 135 1.202114 CATCATTGGTTCCGGTTGGTG 59.798 52.381 0.00 0.00 36.30 4.17
135 136 1.544724 CATCATTGGTTCCGGTTGGT 58.455 50.000 0.00 0.00 36.30 3.67
136 137 0.817013 CCATCATTGGTTCCGGTTGG 59.183 55.000 0.00 0.00 38.30 3.77
160 161 4.247380 GATGGGCCTCGCTCCTGG 62.247 72.222 4.53 0.00 0.00 4.45
161 162 4.598894 CGATGGGCCTCGCTCCTG 62.599 72.222 4.53 0.00 0.00 3.86
164 165 4.162690 AACCGATGGGCCTCGCTC 62.163 66.667 16.66 3.56 37.33 5.03
165 166 4.162690 GAACCGATGGGCCTCGCT 62.163 66.667 16.66 8.30 37.33 4.93
167 168 4.143333 ACGAACCGATGGGCCTCG 62.143 66.667 14.74 14.74 43.83 4.63
168 169 2.202892 GACGAACCGATGGGCCTC 60.203 66.667 4.53 0.00 36.48 4.70
169 170 3.782443 GGACGAACCGATGGGCCT 61.782 66.667 4.53 0.00 36.48 5.19
170 171 4.851179 GGGACGAACCGATGGGCC 62.851 72.222 0.00 0.00 40.11 5.80
171 172 4.090588 TGGGACGAACCGATGGGC 62.091 66.667 0.00 0.00 40.11 5.36
172 173 2.125269 GTGGGACGAACCGATGGG 60.125 66.667 0.00 0.00 40.11 4.00
173 174 2.125269 GGTGGGACGAACCGATGG 60.125 66.667 0.00 0.00 40.11 3.51
174 175 1.004320 TTGGTGGGACGAACCGATG 60.004 57.895 0.00 0.00 40.86 3.84
175 176 1.004200 GTTGGTGGGACGAACCGAT 60.004 57.895 0.00 0.00 40.86 4.18
176 177 2.422591 GTTGGTGGGACGAACCGA 59.577 61.111 0.00 0.00 40.86 4.69
177 178 2.667199 GGTTGGTGGGACGAACCG 60.667 66.667 5.08 0.00 44.79 4.44
179 180 2.663423 TTCCGGTTGGTGGGACGAAC 62.663 60.000 0.00 0.00 36.30 3.95
180 181 2.441675 TTCCGGTTGGTGGGACGAA 61.442 57.895 0.00 0.00 36.30 3.85
181 182 2.843411 TTCCGGTTGGTGGGACGA 60.843 61.111 0.00 0.00 36.30 4.20
182 183 2.667199 GTTCCGGTTGGTGGGACG 60.667 66.667 0.00 0.00 36.30 4.79
183 184 2.281970 GGTTCCGGTTGGTGGGAC 60.282 66.667 0.00 0.00 33.92 4.46
184 185 1.934459 TTTGGTTCCGGTTGGTGGGA 61.934 55.000 0.00 0.00 36.30 4.37
185 186 1.043673 TTTTGGTTCCGGTTGGTGGG 61.044 55.000 0.00 0.00 36.30 4.61
186 187 0.387565 CTTTTGGTTCCGGTTGGTGG 59.612 55.000 0.00 0.00 36.30 4.61
187 188 0.387565 CCTTTTGGTTCCGGTTGGTG 59.612 55.000 0.00 0.00 33.54 4.17
188 189 2.815384 CCTTTTGGTTCCGGTTGGT 58.185 52.632 0.00 0.00 33.54 3.67
200 201 0.865769 CGGTTCGTCTGGACCTTTTG 59.134 55.000 0.00 0.00 0.00 2.44
201 202 0.250166 CCGGTTCGTCTGGACCTTTT 60.250 55.000 0.00 0.00 45.09 2.27
202 203 1.117142 TCCGGTTCGTCTGGACCTTT 61.117 55.000 0.00 0.00 45.77 3.11
203 204 1.532316 TCCGGTTCGTCTGGACCTT 60.532 57.895 0.00 0.00 45.77 3.50
204 205 2.116772 TCCGGTTCGTCTGGACCT 59.883 61.111 0.00 0.00 45.77 3.85
208 209 0.321298 ATTGGTTCCGGTTCGTCTGG 60.321 55.000 0.00 2.66 43.70 3.86
209 210 0.796312 CATTGGTTCCGGTTCGTCTG 59.204 55.000 0.00 0.00 0.00 3.51
210 211 0.682852 TCATTGGTTCCGGTTCGTCT 59.317 50.000 0.00 0.00 0.00 4.18
211 212 0.794473 GTCATTGGTTCCGGTTCGTC 59.206 55.000 0.00 0.00 0.00 4.20
212 213 0.604511 GGTCATTGGTTCCGGTTCGT 60.605 55.000 0.00 0.00 0.00 3.85
213 214 1.303091 GGGTCATTGGTTCCGGTTCG 61.303 60.000 0.00 0.00 0.00 3.95
214 215 0.250989 TGGGTCATTGGTTCCGGTTC 60.251 55.000 0.00 0.00 0.00 3.62
215 216 0.538746 GTGGGTCATTGGTTCCGGTT 60.539 55.000 0.00 0.00 0.00 4.44
216 217 1.074248 GTGGGTCATTGGTTCCGGT 59.926 57.895 0.00 0.00 0.00 5.28
217 218 2.038269 CGTGGGTCATTGGTTCCGG 61.038 63.158 0.00 0.00 0.00 5.14
218 219 1.302192 ACGTGGGTCATTGGTTCCG 60.302 57.895 0.00 0.00 0.00 4.30
219 220 1.241315 CCACGTGGGTCATTGGTTCC 61.241 60.000 27.57 0.00 0.00 3.62
220 221 1.862602 GCCACGTGGGTCATTGGTTC 61.863 60.000 34.58 11.10 39.65 3.62
221 222 1.901464 GCCACGTGGGTCATTGGTT 60.901 57.895 34.58 0.00 39.65 3.67
222 223 2.282180 GCCACGTGGGTCATTGGT 60.282 61.111 34.58 0.00 39.65 3.67
223 224 3.061848 GGCCACGTGGGTCATTGG 61.062 66.667 34.58 8.47 42.53 3.16
224 225 3.061848 GGGCCACGTGGGTCATTG 61.062 66.667 34.58 9.05 45.89 2.82
225 226 4.715523 CGGGCCACGTGGGTCATT 62.716 66.667 34.58 0.00 45.89 2.57
254 255 4.754667 GACCCGGTTCGTGAGCCC 62.755 72.222 0.00 0.00 0.00 5.19
255 256 4.754667 GGACCCGGTTCGTGAGCC 62.755 72.222 0.00 0.00 0.00 4.70
256 257 2.798148 ATTGGACCCGGTTCGTGAGC 62.798 60.000 0.00 0.00 0.00 4.26
257 258 1.019278 CATTGGACCCGGTTCGTGAG 61.019 60.000 0.00 0.00 0.00 3.51
258 259 1.004320 CATTGGACCCGGTTCGTGA 60.004 57.895 0.00 0.00 0.00 4.35
259 260 2.686816 GCATTGGACCCGGTTCGTG 61.687 63.158 0.00 0.00 0.00 4.35
260 261 2.359478 GCATTGGACCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
261 262 3.131478 GGCATTGGACCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
262 263 2.754254 GGGCATTGGACCCGGTTC 60.754 66.667 0.00 0.00 37.67 3.62
268 269 0.398948 AATCCATGGGGCATTGGACC 60.399 55.000 13.02 0.00 43.93 4.46
269 270 1.043022 GAATCCATGGGGCATTGGAC 58.957 55.000 13.02 0.00 32.77 4.02
270 271 0.105555 GGAATCCATGGGGCATTGGA 60.106 55.000 13.02 4.99 34.66 3.53
271 272 1.466025 CGGAATCCATGGGGCATTGG 61.466 60.000 13.02 0.00 0.00 3.16
272 273 1.466025 CCGGAATCCATGGGGCATTG 61.466 60.000 13.02 0.00 0.00 2.82
273 274 1.152483 CCGGAATCCATGGGGCATT 60.152 57.895 13.02 4.17 0.00 3.56
274 275 1.948403 AACCGGAATCCATGGGGCAT 61.948 55.000 9.46 0.00 0.00 4.40
275 276 2.566111 GAACCGGAATCCATGGGGCA 62.566 60.000 9.46 0.00 0.00 5.36
276 277 1.828224 GAACCGGAATCCATGGGGC 60.828 63.158 9.46 1.13 0.00 5.80
277 278 0.466189 CAGAACCGGAATCCATGGGG 60.466 60.000 9.46 7.20 0.00 4.96
278 279 0.466189 CCAGAACCGGAATCCATGGG 60.466 60.000 9.46 0.00 0.00 4.00
279 280 0.546122 TCCAGAACCGGAATCCATGG 59.454 55.000 9.46 4.97 29.93 3.66
280 281 1.210478 AGTCCAGAACCGGAATCCATG 59.790 52.381 9.46 1.37 36.62 3.66
281 282 1.210478 CAGTCCAGAACCGGAATCCAT 59.790 52.381 9.46 0.00 36.62 3.41
282 283 0.613260 CAGTCCAGAACCGGAATCCA 59.387 55.000 9.46 0.00 36.62 3.41
283 284 0.902531 TCAGTCCAGAACCGGAATCC 59.097 55.000 9.46 0.00 36.62 3.01
284 285 2.347731 GTTCAGTCCAGAACCGGAATC 58.652 52.381 9.46 6.12 41.52 2.52
285 286 2.474410 GTTCAGTCCAGAACCGGAAT 57.526 50.000 9.46 0.00 41.52 3.01
291 292 1.070289 AGTTCCGGTTCAGTCCAGAAC 59.930 52.381 0.00 4.30 45.50 3.01
292 293 1.420430 AGTTCCGGTTCAGTCCAGAA 58.580 50.000 0.00 0.00 0.00 3.02
293 294 2.297698 TAGTTCCGGTTCAGTCCAGA 57.702 50.000 0.00 0.00 0.00 3.86
294 295 3.056107 TCATTAGTTCCGGTTCAGTCCAG 60.056 47.826 0.00 0.00 0.00 3.86
295 296 2.901192 TCATTAGTTCCGGTTCAGTCCA 59.099 45.455 0.00 0.00 0.00 4.02
296 297 3.522553 CTCATTAGTTCCGGTTCAGTCC 58.477 50.000 0.00 0.00 0.00 3.85
297 298 2.930682 GCTCATTAGTTCCGGTTCAGTC 59.069 50.000 0.00 0.00 0.00 3.51
298 299 2.567615 AGCTCATTAGTTCCGGTTCAGT 59.432 45.455 0.00 0.00 0.00 3.41
299 300 2.932614 CAGCTCATTAGTTCCGGTTCAG 59.067 50.000 0.00 0.00 0.00 3.02
300 301 2.565391 TCAGCTCATTAGTTCCGGTTCA 59.435 45.455 0.00 0.00 0.00 3.18
301 302 2.930682 GTCAGCTCATTAGTTCCGGTTC 59.069 50.000 0.00 0.00 0.00 3.62
302 303 2.354805 GGTCAGCTCATTAGTTCCGGTT 60.355 50.000 0.00 0.00 0.00 4.44
303 304 1.207329 GGTCAGCTCATTAGTTCCGGT 59.793 52.381 0.00 0.00 0.00 5.28
304 305 1.473434 GGGTCAGCTCATTAGTTCCGG 60.473 57.143 0.00 0.00 0.00 5.14
305 306 1.802880 CGGGTCAGCTCATTAGTTCCG 60.803 57.143 0.00 0.00 0.00 4.30
306 307 1.473434 CCGGGTCAGCTCATTAGTTCC 60.473 57.143 0.00 0.00 0.00 3.62
307 308 1.941325 CCGGGTCAGCTCATTAGTTC 58.059 55.000 0.00 0.00 0.00 3.01
308 309 0.107654 GCCGGGTCAGCTCATTAGTT 60.108 55.000 2.18 0.00 0.00 2.24
309 310 1.522569 GCCGGGTCAGCTCATTAGT 59.477 57.895 2.18 0.00 0.00 2.24
310 311 1.227674 GGCCGGGTCAGCTCATTAG 60.228 63.158 2.18 0.00 0.00 1.73
311 312 1.689233 AGGCCGGGTCAGCTCATTA 60.689 57.895 2.18 0.00 0.00 1.90
312 313 3.011517 AGGCCGGGTCAGCTCATT 61.012 61.111 2.18 0.00 0.00 2.57
313 314 3.790437 CAGGCCGGGTCAGCTCAT 61.790 66.667 2.18 0.00 0.00 2.90
319 320 4.974438 AAGGTCCAGGCCGGGTCA 62.974 66.667 22.25 0.00 34.36 4.02
320 321 3.647771 AAAGGTCCAGGCCGGGTC 61.648 66.667 22.25 16.31 34.36 4.46
321 322 3.966543 CAAAGGTCCAGGCCGGGT 61.967 66.667 22.25 0.00 34.36 5.28
325 326 3.946126 GAGGGCAAAGGTCCAGGCC 62.946 68.421 12.06 12.06 43.06 5.19
326 327 2.361737 GAGGGCAAAGGTCCAGGC 60.362 66.667 0.00 0.00 43.06 4.85
327 328 0.113190 AAAGAGGGCAAAGGTCCAGG 59.887 55.000 0.00 0.00 43.06 4.45
328 329 1.889170 GAAAAGAGGGCAAAGGTCCAG 59.111 52.381 0.00 0.00 43.06 3.86
329 330 1.499007 AGAAAAGAGGGCAAAGGTCCA 59.501 47.619 0.00 0.00 43.06 4.02
330 331 2.294449 AGAAAAGAGGGCAAAGGTCC 57.706 50.000 0.00 0.00 39.90 4.46
331 332 4.022413 AGTAGAAAAGAGGGCAAAGGTC 57.978 45.455 0.00 0.00 0.00 3.85
332 333 4.597940 ACTAGTAGAAAAGAGGGCAAAGGT 59.402 41.667 3.59 0.00 0.00 3.50
333 334 4.938226 CACTAGTAGAAAAGAGGGCAAAGG 59.062 45.833 3.59 0.00 0.00 3.11
334 335 5.552178 ACACTAGTAGAAAAGAGGGCAAAG 58.448 41.667 3.59 0.00 0.00 2.77
335 336 5.562298 ACACTAGTAGAAAAGAGGGCAAA 57.438 39.130 3.59 0.00 0.00 3.68
336 337 5.562298 AACACTAGTAGAAAAGAGGGCAA 57.438 39.130 3.59 0.00 0.00 4.52
337 338 5.046807 GGTAACACTAGTAGAAAAGAGGGCA 60.047 44.000 3.59 0.00 0.00 5.36
338 339 5.417811 GGTAACACTAGTAGAAAAGAGGGC 58.582 45.833 3.59 0.00 0.00 5.19
339 340 5.720520 AGGGTAACACTAGTAGAAAAGAGGG 59.279 44.000 3.59 0.00 39.74 4.30
340 341 6.854091 AGGGTAACACTAGTAGAAAAGAGG 57.146 41.667 3.59 0.00 39.74 3.69
346 347 9.979897 TGAAACTATAGGGTAACACTAGTAGAA 57.020 33.333 3.59 0.00 39.74 2.10
347 348 9.979897 TTGAAACTATAGGGTAACACTAGTAGA 57.020 33.333 3.59 0.00 39.74 2.59
349 350 9.759473 AGTTGAAACTATAGGGTAACACTAGTA 57.241 33.333 4.43 0.00 37.52 1.82
350 351 8.661752 AGTTGAAACTATAGGGTAACACTAGT 57.338 34.615 4.43 0.00 37.52 2.57
352 353 9.979897 TCTAGTTGAAACTATAGGGTAACACTA 57.020 33.333 4.43 2.95 40.46 2.74
353 354 8.747471 GTCTAGTTGAAACTATAGGGTAACACT 58.253 37.037 4.43 1.95 40.46 3.55
354 355 8.526147 TGTCTAGTTGAAACTATAGGGTAACAC 58.474 37.037 4.43 0.74 40.46 3.32
355 356 8.654485 TGTCTAGTTGAAACTATAGGGTAACA 57.346 34.615 4.43 0.00 40.46 2.41
356 357 7.705752 GCTGTCTAGTTGAAACTATAGGGTAAC 59.294 40.741 4.43 4.36 40.46 2.50
357 358 7.398047 TGCTGTCTAGTTGAAACTATAGGGTAA 59.602 37.037 4.43 0.00 40.46 2.85
358 359 6.893554 TGCTGTCTAGTTGAAACTATAGGGTA 59.106 38.462 4.43 0.00 40.46 3.69
359 360 5.720041 TGCTGTCTAGTTGAAACTATAGGGT 59.280 40.000 4.43 0.00 40.46 4.34
368 369 4.185394 TGTTCGTTGCTGTCTAGTTGAAA 58.815 39.130 0.00 0.00 0.00 2.69
381 382 1.098712 TGGTGACCCTTGTTCGTTGC 61.099 55.000 0.00 0.00 0.00 4.17
386 387 0.822121 GGTGGTGGTGACCCTTGTTC 60.822 60.000 0.00 0.00 42.34 3.18
394 395 2.280592 GTGGACGGTGGTGGTGAC 60.281 66.667 0.00 0.00 0.00 3.67
407 408 5.657745 TGTTACTTGAATATACTCCGGTGGA 59.342 40.000 8.63 0.00 0.00 4.02
494 502 1.109323 ACCTGGTGTTTGCAGCTTCC 61.109 55.000 0.00 0.00 43.05 3.46
536 544 9.243637 TCACATTTAAAACGGAAGAAAAATCTG 57.756 29.630 0.00 0.00 0.00 2.90
636 662 0.179200 CGACGTGCAAAAGGGTATGC 60.179 55.000 0.00 0.00 42.86 3.14
656 682 1.318576 AGTTTTGAACGCAGAAGGGG 58.681 50.000 0.00 0.00 36.23 4.79
660 686 7.254227 AGTGTAAATAGTTTTGAACGCAGAA 57.746 32.000 0.00 0.00 36.23 3.02
756 784 3.625649 ATGCCCTTCTCTCTCTGTTTC 57.374 47.619 0.00 0.00 0.00 2.78
757 785 4.379302 AAATGCCCTTCTCTCTCTGTTT 57.621 40.909 0.00 0.00 0.00 2.83
843 879 1.060937 CCTTTCGAAATCGCGGCTG 59.939 57.895 11.70 0.00 39.60 4.85
906 946 2.665000 CGCAGCTTTCTCCCCTCA 59.335 61.111 0.00 0.00 0.00 3.86
969 1009 2.197324 GGGTTGCTTCCACCACCA 59.803 61.111 0.00 0.00 0.00 4.17
987 1027 0.184933 CCGTCATCCTCTCTCCTCCT 59.815 60.000 0.00 0.00 0.00 3.69
988 1028 0.825840 CCCGTCATCCTCTCTCCTCC 60.826 65.000 0.00 0.00 0.00 4.30
989 1029 0.825840 CCCCGTCATCCTCTCTCCTC 60.826 65.000 0.00 0.00 0.00 3.71
990 1030 1.231641 CCCCGTCATCCTCTCTCCT 59.768 63.158 0.00 0.00 0.00 3.69
991 1031 1.834822 CCCCCGTCATCCTCTCTCC 60.835 68.421 0.00 0.00 0.00 3.71
992 1032 1.075896 ACCCCCGTCATCCTCTCTC 60.076 63.158 0.00 0.00 0.00 3.20
993 1033 1.381872 CACCCCCGTCATCCTCTCT 60.382 63.158 0.00 0.00 0.00 3.10
994 1034 2.435693 CCACCCCCGTCATCCTCTC 61.436 68.421 0.00 0.00 0.00 3.20
995 1035 2.365635 CCACCCCCGTCATCCTCT 60.366 66.667 0.00 0.00 0.00 3.69
996 1036 2.687566 ACCACCCCCGTCATCCTC 60.688 66.667 0.00 0.00 0.00 3.71
1403 1449 3.201045 GGAAGGAAGCTAGGAAGGTTGAT 59.799 47.826 0.00 0.00 43.36 2.57
1452 1498 4.326504 AATTTGGGACAGTTTGCAGAAG 57.673 40.909 0.00 0.00 42.39 2.85
1549 1601 0.249447 CGTATCCAAGCATGCTCCGA 60.249 55.000 22.93 19.10 0.00 4.55
1550 1602 0.530650 ACGTATCCAAGCATGCTCCG 60.531 55.000 22.93 15.22 0.00 4.63
1551 1603 1.668419 AACGTATCCAAGCATGCTCC 58.332 50.000 22.93 4.17 0.00 4.70
1552 1604 3.764885 AAAACGTATCCAAGCATGCTC 57.235 42.857 22.93 6.18 0.00 4.26
1553 1605 4.261801 ACTAAAACGTATCCAAGCATGCT 58.738 39.130 16.30 16.30 0.00 3.79
1554 1606 4.495844 GGACTAAAACGTATCCAAGCATGC 60.496 45.833 10.51 10.51 0.00 4.06
1555 1607 4.035208 GGGACTAAAACGTATCCAAGCATG 59.965 45.833 0.00 0.00 32.45 4.06
1556 1608 4.196971 GGGACTAAAACGTATCCAAGCAT 58.803 43.478 0.00 0.00 32.45 3.79
1557 1609 3.008157 TGGGACTAAAACGTATCCAAGCA 59.992 43.478 0.00 0.00 32.45 3.91
1558 1610 3.602483 TGGGACTAAAACGTATCCAAGC 58.398 45.455 0.00 0.00 32.45 4.01
1559 1611 5.293569 GTCATGGGACTAAAACGTATCCAAG 59.706 44.000 0.00 0.00 40.99 3.61
1560 1612 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
1561 1613 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
1576 1628 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
1577 1629 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
1578 1630 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
1579 1631 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
1580 1632 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
1581 1633 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
1582 1634 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
1583 1635 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
1584 1636 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
1585 1637 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
1586 1638 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
1587 1639 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
1588 1640 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
1589 1641 5.791666 ACTAGCAAGTTTTAGTCCCACTAC 58.208 41.667 0.00 0.00 27.15 2.73
1590 1642 5.778750 AGACTAGCAAGTTTTAGTCCCACTA 59.221 40.000 15.72 0.00 44.32 2.74
1591 1643 4.593634 AGACTAGCAAGTTTTAGTCCCACT 59.406 41.667 15.72 1.62 44.32 4.00
1592 1644 4.895961 AGACTAGCAAGTTTTAGTCCCAC 58.104 43.478 15.72 0.00 44.32 4.61
1593 1645 4.591498 TGAGACTAGCAAGTTTTAGTCCCA 59.409 41.667 15.72 10.61 44.32 4.37
1594 1646 4.930405 GTGAGACTAGCAAGTTTTAGTCCC 59.070 45.833 15.72 8.76 44.32 4.46
1595 1647 4.930405 GGTGAGACTAGCAAGTTTTAGTCC 59.070 45.833 15.72 10.59 44.32 3.85
1596 1648 4.930405 GGGTGAGACTAGCAAGTTTTAGTC 59.070 45.833 13.08 13.08 43.83 2.59
1597 1649 4.347000 TGGGTGAGACTAGCAAGTTTTAGT 59.653 41.667 0.00 0.00 35.56 2.24
1598 1650 4.894784 TGGGTGAGACTAGCAAGTTTTAG 58.105 43.478 0.00 0.00 35.56 1.85
1599 1651 4.967084 TGGGTGAGACTAGCAAGTTTTA 57.033 40.909 0.00 0.00 35.56 1.52
1600 1652 3.857157 TGGGTGAGACTAGCAAGTTTT 57.143 42.857 0.00 0.00 35.56 2.43
1601 1653 3.679389 CATGGGTGAGACTAGCAAGTTT 58.321 45.455 0.00 0.00 35.56 2.66
1602 1654 2.616510 GCATGGGTGAGACTAGCAAGTT 60.617 50.000 0.00 0.00 35.56 2.66
1603 1655 1.065854 GCATGGGTGAGACTAGCAAGT 60.066 52.381 0.00 0.00 39.21 3.16
1604 1656 1.209019 AGCATGGGTGAGACTAGCAAG 59.791 52.381 0.00 0.00 0.00 4.01
1605 1657 1.279496 AGCATGGGTGAGACTAGCAA 58.721 50.000 0.00 0.00 0.00 3.91
1606 1658 1.065926 CAAGCATGGGTGAGACTAGCA 60.066 52.381 0.00 0.00 0.00 3.49
1607 1659 1.661341 CAAGCATGGGTGAGACTAGC 58.339 55.000 0.00 0.00 0.00 3.42
1608 1660 2.322355 CCAAGCATGGGTGAGACTAG 57.678 55.000 0.00 0.00 43.51 2.57
1619 1671 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
1620 1672 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
1621 1673 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
1622 1674 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
1655 1707 9.866655 TTGGAGGATAATAAATGCTCAATAACT 57.133 29.630 8.48 0.00 38.10 2.24
1658 1710 9.077885 GGTTTGGAGGATAATAAATGCTCAATA 57.922 33.333 8.48 0.00 38.10 1.90
1659 1711 7.015584 GGGTTTGGAGGATAATAAATGCTCAAT 59.984 37.037 8.48 0.00 38.10 2.57
1660 1712 6.323739 GGGTTTGGAGGATAATAAATGCTCAA 59.676 38.462 8.48 0.00 38.10 3.02
1661 1713 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
1662 1714 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
1663 1715 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
1664 1716 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
1665 1717 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
1666 1718 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
1667 1719 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
1668 1720 6.411554 GGATTGGAGGGTTTGGAGGATAATAA 60.412 42.308 0.00 0.00 0.00 1.40
1669 1721 5.074515 GGATTGGAGGGTTTGGAGGATAATA 59.925 44.000 0.00 0.00 0.00 0.98
1670 1722 4.140924 GGATTGGAGGGTTTGGAGGATAAT 60.141 45.833 0.00 0.00 0.00 1.28
1671 1723 3.204382 GGATTGGAGGGTTTGGAGGATAA 59.796 47.826 0.00 0.00 0.00 1.75
1672 1724 2.783510 GGATTGGAGGGTTTGGAGGATA 59.216 50.000 0.00 0.00 0.00 2.59
1673 1725 1.570979 GGATTGGAGGGTTTGGAGGAT 59.429 52.381 0.00 0.00 0.00 3.24
1674 1726 0.999712 GGATTGGAGGGTTTGGAGGA 59.000 55.000 0.00 0.00 0.00 3.71
1675 1727 0.704076 TGGATTGGAGGGTTTGGAGG 59.296 55.000 0.00 0.00 0.00 4.30
1676 1728 1.635487 TCTGGATTGGAGGGTTTGGAG 59.365 52.381 0.00 0.00 0.00 3.86
1677 1729 1.753903 TCTGGATTGGAGGGTTTGGA 58.246 50.000 0.00 0.00 0.00 3.53
1678 1730 2.171003 GTTCTGGATTGGAGGGTTTGG 58.829 52.381 0.00 0.00 0.00 3.28
1679 1731 3.160679 AGTTCTGGATTGGAGGGTTTG 57.839 47.619 0.00 0.00 0.00 2.93
1680 1732 4.263949 CCTTAGTTCTGGATTGGAGGGTTT 60.264 45.833 0.00 0.00 0.00 3.27
1681 1733 3.267031 CCTTAGTTCTGGATTGGAGGGTT 59.733 47.826 0.00 0.00 0.00 4.11
1682 1734 2.846827 CCTTAGTTCTGGATTGGAGGGT 59.153 50.000 0.00 0.00 0.00 4.34
1683 1735 3.115390 TCCTTAGTTCTGGATTGGAGGG 58.885 50.000 0.00 0.00 0.00 4.30
1684 1736 4.033709 TCTCCTTAGTTCTGGATTGGAGG 58.966 47.826 0.00 0.00 39.80 4.30
1685 1737 4.100808 CCTCTCCTTAGTTCTGGATTGGAG 59.899 50.000 0.00 0.00 40.47 3.86
1686 1738 4.033709 CCTCTCCTTAGTTCTGGATTGGA 58.966 47.826 0.00 0.00 31.05 3.53
1687 1739 4.033709 TCCTCTCCTTAGTTCTGGATTGG 58.966 47.826 0.00 0.00 0.00 3.16
1688 1740 5.683876 TTCCTCTCCTTAGTTCTGGATTG 57.316 43.478 0.00 0.00 0.00 2.67
1689 1741 6.899892 AATTCCTCTCCTTAGTTCTGGATT 57.100 37.500 0.00 0.00 0.00 3.01
1690 1742 7.996758 TTAATTCCTCTCCTTAGTTCTGGAT 57.003 36.000 0.00 0.00 0.00 3.41
1691 1743 7.808279 TTTAATTCCTCTCCTTAGTTCTGGA 57.192 36.000 0.00 0.00 0.00 3.86
1692 1744 8.267894 TCATTTAATTCCTCTCCTTAGTTCTGG 58.732 37.037 0.00 0.00 0.00 3.86
1693 1745 9.323985 CTCATTTAATTCCTCTCCTTAGTTCTG 57.676 37.037 0.00 0.00 0.00 3.02
1694 1746 8.490311 CCTCATTTAATTCCTCTCCTTAGTTCT 58.510 37.037 0.00 0.00 0.00 3.01
1695 1747 8.487028 TCCTCATTTAATTCCTCTCCTTAGTTC 58.513 37.037 0.00 0.00 0.00 3.01
1696 1748 8.393959 TCCTCATTTAATTCCTCTCCTTAGTT 57.606 34.615 0.00 0.00 0.00 2.24
1697 1749 7.846823 TCTCCTCATTTAATTCCTCTCCTTAGT 59.153 37.037 0.00 0.00 0.00 2.24
1698 1750 8.256356 TCTCCTCATTTAATTCCTCTCCTTAG 57.744 38.462 0.00 0.00 0.00 2.18
1699 1751 8.068110 TCTCTCCTCATTTAATTCCTCTCCTTA 58.932 37.037 0.00 0.00 0.00 2.69
1700 1752 6.905776 TCTCTCCTCATTTAATTCCTCTCCTT 59.094 38.462 0.00 0.00 0.00 3.36
1701 1753 6.448202 TCTCTCCTCATTTAATTCCTCTCCT 58.552 40.000 0.00 0.00 0.00 3.69
1702 1754 6.553100 TCTCTCTCCTCATTTAATTCCTCTCC 59.447 42.308 0.00 0.00 0.00 3.71
1703 1755 7.505585 TCTCTCTCTCCTCATTTAATTCCTCTC 59.494 40.741 0.00 0.00 0.00 3.20
1704 1756 7.361438 TCTCTCTCTCCTCATTTAATTCCTCT 58.639 38.462 0.00 0.00 0.00 3.69
1705 1757 7.595819 TCTCTCTCTCCTCATTTAATTCCTC 57.404 40.000 0.00 0.00 0.00 3.71
1706 1758 6.041979 GCTCTCTCTCTCCTCATTTAATTCCT 59.958 42.308 0.00 0.00 0.00 3.36
1707 1759 6.041979 AGCTCTCTCTCTCCTCATTTAATTCC 59.958 42.308 0.00 0.00 0.00 3.01
1708 1760 7.054491 AGCTCTCTCTCTCCTCATTTAATTC 57.946 40.000 0.00 0.00 0.00 2.17
1709 1761 8.546083 TTAGCTCTCTCTCTCCTCATTTAATT 57.454 34.615 0.00 0.00 0.00 1.40
1710 1762 8.725606 ATTAGCTCTCTCTCTCCTCATTTAAT 57.274 34.615 0.00 0.00 0.00 1.40
1711 1763 9.073475 GTATTAGCTCTCTCTCTCCTCATTTAA 57.927 37.037 0.00 0.00 0.00 1.52
1712 1764 8.221251 TGTATTAGCTCTCTCTCTCCTCATTTA 58.779 37.037 0.00 0.00 0.00 1.40
1713 1765 7.066142 TGTATTAGCTCTCTCTCTCCTCATTT 58.934 38.462 0.00 0.00 0.00 2.32
1714 1766 6.609876 TGTATTAGCTCTCTCTCTCCTCATT 58.390 40.000 0.00 0.00 0.00 2.57
1715 1767 6.199557 TGTATTAGCTCTCTCTCTCCTCAT 57.800 41.667 0.00 0.00 0.00 2.90
1716 1768 5.638530 TGTATTAGCTCTCTCTCTCCTCA 57.361 43.478 0.00 0.00 0.00 3.86
1717 1769 8.807948 AATATGTATTAGCTCTCTCTCTCCTC 57.192 38.462 0.00 0.00 0.00 3.71
1718 1770 9.600432 AAAATATGTATTAGCTCTCTCTCTCCT 57.400 33.333 0.00 0.00 0.00 3.69
1748 1800 9.025041 CTAAAATCTTTTAGTCATGGGAAACCT 57.975 33.333 12.31 0.00 45.91 3.50
1762 1814 9.654663 GACTAGTCTTGAGGCTAAAATCTTTTA 57.345 33.333 15.91 0.00 0.00 1.52
1763 1815 7.608376 GGACTAGTCTTGAGGCTAAAATCTTTT 59.392 37.037 21.88 0.00 0.00 2.27
1764 1816 7.037945 AGGACTAGTCTTGAGGCTAAAATCTTT 60.038 37.037 21.88 0.00 0.00 2.52
1765 1817 6.442244 AGGACTAGTCTTGAGGCTAAAATCTT 59.558 38.462 21.88 0.00 0.00 2.40
1766 1818 5.961421 AGGACTAGTCTTGAGGCTAAAATCT 59.039 40.000 21.88 3.06 0.00 2.40
1767 1819 6.228616 AGGACTAGTCTTGAGGCTAAAATC 57.771 41.667 21.88 0.73 0.00 2.17
1768 1820 6.183360 GCTAGGACTAGTCTTGAGGCTAAAAT 60.183 42.308 21.88 0.00 35.65 1.82
1769 1821 5.127356 GCTAGGACTAGTCTTGAGGCTAAAA 59.873 44.000 21.88 0.00 35.65 1.52
1770 1822 4.645588 GCTAGGACTAGTCTTGAGGCTAAA 59.354 45.833 21.88 0.00 35.65 1.85
1771 1823 4.208746 GCTAGGACTAGTCTTGAGGCTAA 58.791 47.826 21.88 0.00 35.65 3.09
1772 1824 3.435313 GGCTAGGACTAGTCTTGAGGCTA 60.435 52.174 24.87 16.06 35.06 3.93
1773 1825 2.661718 GCTAGGACTAGTCTTGAGGCT 58.338 52.381 21.88 11.79 35.65 4.58
1774 1826 1.684450 GGCTAGGACTAGTCTTGAGGC 59.316 57.143 21.88 21.38 35.06 4.70
1775 1827 3.306472 AGGCTAGGACTAGTCTTGAGG 57.694 52.381 21.88 10.56 45.03 3.86
1781 1833 5.687780 ACTAAAGAGAGGCTAGGACTAGTC 58.312 45.833 14.87 14.87 38.03 2.59
1782 1834 5.192121 TGACTAAAGAGAGGCTAGGACTAGT 59.808 44.000 0.00 0.00 35.65 2.57
1783 1835 5.686753 TGACTAAAGAGAGGCTAGGACTAG 58.313 45.833 1.98 1.98 36.29 2.57
1784 1836 5.398126 CCTGACTAAAGAGAGGCTAGGACTA 60.398 48.000 0.00 0.00 29.08 2.59
1785 1837 4.532834 CTGACTAAAGAGAGGCTAGGACT 58.467 47.826 0.00 0.00 0.00 3.85
1786 1838 3.634910 CCTGACTAAAGAGAGGCTAGGAC 59.365 52.174 0.00 0.00 29.08 3.85
1787 1839 3.373220 CCCTGACTAAAGAGAGGCTAGGA 60.373 52.174 0.00 0.00 29.08 2.94
1788 1840 2.962421 CCCTGACTAAAGAGAGGCTAGG 59.038 54.545 0.00 0.00 0.00 3.02
1789 1841 2.962421 CCCCTGACTAAAGAGAGGCTAG 59.038 54.545 0.00 0.00 0.00 3.42
1790 1842 2.315155 ACCCCTGACTAAAGAGAGGCTA 59.685 50.000 0.00 0.00 0.00 3.93
1791 1843 1.079658 ACCCCTGACTAAAGAGAGGCT 59.920 52.381 0.00 0.00 0.00 4.58
1792 1844 1.208293 CACCCCTGACTAAAGAGAGGC 59.792 57.143 0.00 0.00 0.00 4.70
1793 1845 1.208293 GCACCCCTGACTAAAGAGAGG 59.792 57.143 0.00 0.00 0.00 3.69
1794 1846 2.183679 AGCACCCCTGACTAAAGAGAG 58.816 52.381 0.00 0.00 0.00 3.20
1795 1847 2.303022 CAAGCACCCCTGACTAAAGAGA 59.697 50.000 0.00 0.00 0.00 3.10
1796 1848 2.616510 CCAAGCACCCCTGACTAAAGAG 60.617 54.545 0.00 0.00 0.00 2.85
1797 1849 1.351017 CCAAGCACCCCTGACTAAAGA 59.649 52.381 0.00 0.00 0.00 2.52
1798 1850 1.351017 TCCAAGCACCCCTGACTAAAG 59.649 52.381 0.00 0.00 0.00 1.85
1799 1851 1.440618 TCCAAGCACCCCTGACTAAA 58.559 50.000 0.00 0.00 0.00 1.85
1800 1852 1.073284 GTTCCAAGCACCCCTGACTAA 59.927 52.381 0.00 0.00 0.00 2.24
1801 1853 0.690762 GTTCCAAGCACCCCTGACTA 59.309 55.000 0.00 0.00 0.00 2.59
1802 1854 1.062488 AGTTCCAAGCACCCCTGACT 61.062 55.000 0.00 0.00 0.00 3.41
1803 1855 0.178990 AAGTTCCAAGCACCCCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
1804 1856 0.555769 AAAGTTCCAAGCACCCCTGA 59.444 50.000 0.00 0.00 0.00 3.86
1805 1857 2.162681 CTAAAGTTCCAAGCACCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
1806 1858 1.547901 GCTAAAGTTCCAAGCACCCCT 60.548 52.381 0.00 0.00 36.26 4.79
1807 1859 0.888619 GCTAAAGTTCCAAGCACCCC 59.111 55.000 0.00 0.00 36.26 4.95
1808 1860 0.888619 GGCTAAAGTTCCAAGCACCC 59.111 55.000 7.02 0.00 38.01 4.61
1809 1861 1.813178 GAGGCTAAAGTTCCAAGCACC 59.187 52.381 0.00 0.00 38.01 5.01
1810 1862 2.784347 AGAGGCTAAAGTTCCAAGCAC 58.216 47.619 0.00 2.09 38.01 4.40
1811 1863 4.634012 TTAGAGGCTAAAGTTCCAAGCA 57.366 40.909 0.00 0.00 38.01 3.91
1812 1864 5.705905 TCTTTTAGAGGCTAAAGTTCCAAGC 59.294 40.000 7.84 0.00 33.97 4.01
1813 1865 7.118535 GTCTCTTTTAGAGGCTAAAGTTCCAAG 59.881 40.741 7.84 0.00 43.38 3.61
1814 1866 6.935208 GTCTCTTTTAGAGGCTAAAGTTCCAA 59.065 38.462 7.84 0.00 43.38 3.53
1815 1867 6.465084 GTCTCTTTTAGAGGCTAAAGTTCCA 58.535 40.000 7.84 0.00 43.38 3.53
1816 1868 6.971527 GTCTCTTTTAGAGGCTAAAGTTCC 57.028 41.667 7.84 0.00 43.38 3.62
1825 1877 9.654663 TGACTAAAAATAGTCTCTTTTAGAGGC 57.345 33.333 22.30 14.20 46.94 4.70
1844 1896 9.720769 CAAGGGACTATTTTTAGTCTGACTAAA 57.279 33.333 29.65 29.65 42.90 1.85
1845 1897 8.877195 ACAAGGGACTATTTTTAGTCTGACTAA 58.123 33.333 22.80 22.80 44.35 2.24
1846 1898 8.431910 ACAAGGGACTATTTTTAGTCTGACTA 57.568 34.615 13.34 13.34 44.35 2.59
1847 1899 7.317722 ACAAGGGACTATTTTTAGTCTGACT 57.682 36.000 15.57 15.57 44.35 3.41
1848 1900 9.315525 GATACAAGGGACTATTTTTAGTCTGAC 57.684 37.037 11.69 0.00 44.35 3.51
1849 1901 8.483758 GGATACAAGGGACTATTTTTAGTCTGA 58.516 37.037 11.69 0.00 44.35 3.27
1850 1902 8.664211 GGATACAAGGGACTATTTTTAGTCTG 57.336 38.462 11.69 6.32 44.35 3.51
1870 1922 0.824759 ACGAGAGGGTGCTTGGATAC 59.175 55.000 0.00 0.00 0.00 2.24
1871 1923 0.824109 CACGAGAGGGTGCTTGGATA 59.176 55.000 0.00 0.00 0.00 2.59
1872 1924 1.599047 CACGAGAGGGTGCTTGGAT 59.401 57.895 0.00 0.00 0.00 3.41
1873 1925 3.059982 CACGAGAGGGTGCTTGGA 58.940 61.111 0.00 0.00 0.00 3.53
1879 1931 1.669115 CAACCAGCACGAGAGGGTG 60.669 63.158 0.00 0.00 40.89 4.61
1880 1932 2.743718 CAACCAGCACGAGAGGGT 59.256 61.111 0.00 0.00 36.38 4.34
1881 1933 2.743928 GCAACCAGCACGAGAGGG 60.744 66.667 0.00 0.00 44.79 4.30
1912 1964 8.939201 TTAACAAAAATGACAGCAATTCTCAA 57.061 26.923 0.00 0.00 0.00 3.02
1963 2015 9.967451 CAGATCTATCTACCTATCAGGAAGTAA 57.033 37.037 0.00 0.00 35.13 2.24
2009 2063 8.701895 ACTGGGACTTCTGAATTAATACGAATA 58.298 33.333 0.00 0.00 0.00 1.75
2083 2137 7.667219 ACTGAACCAAAACACATTCTAGATCAT 59.333 33.333 0.00 0.00 0.00 2.45
2088 2142 5.278463 CCCACTGAACCAAAACACATTCTAG 60.278 44.000 0.00 0.00 0.00 2.43
2145 2201 9.154847 GCATAGTTGGCTAAAAATCAAAATTCT 57.845 29.630 0.00 0.00 0.00 2.40
2196 2253 8.081517 TGAATCTTGAAGGGCAAATTTATGAT 57.918 30.769 0.00 0.00 35.74 2.45
2227 2284 3.056749 AGACGTCCTGTAAACTCCATGTC 60.057 47.826 13.01 0.00 0.00 3.06
2295 2352 7.973944 GGACAAAGTCACCATTAAATACCATTC 59.026 37.037 0.00 0.00 33.68 2.67
2482 2540 3.181498 CGTAGGTGCATTGCATTGATTCA 60.181 43.478 15.49 0.00 41.91 2.57
2677 2736 0.944386 CATTCTCCGGGTTTATGCGG 59.056 55.000 0.00 0.00 0.00 5.69
2886 2945 7.599998 GTCGTCTTGTAAAACCAATAGTCCTTA 59.400 37.037 0.00 0.00 0.00 2.69
2894 2953 7.739498 AGTTATGTCGTCTTGTAAAACCAAT 57.261 32.000 0.00 0.00 0.00 3.16
3147 3209 1.203162 TGAGTCATGTTGGGGGCAAAT 60.203 47.619 0.00 0.00 0.00 2.32
3178 3240 3.084786 ACCCTGCAAGAAGACTAAATGC 58.915 45.455 0.00 0.00 34.07 3.56
3183 3245 2.233922 GTGCTACCCTGCAAGAAGACTA 59.766 50.000 0.00 0.00 45.12 2.59
3581 3643 1.079127 ATGGTCGCCTTCCTGTTCG 60.079 57.895 0.00 0.00 0.00 3.95
3614 3676 3.181465 GCCGATCCAAGAATACCTCTTCA 60.181 47.826 0.00 0.00 42.84 3.02
3623 3685 2.648059 CTTTCCAGCCGATCCAAGAAT 58.352 47.619 0.00 0.00 0.00 2.40
3656 3718 1.216710 GCTTCCCTCTGGTCTGTCG 59.783 63.158 0.00 0.00 0.00 4.35
3679 3741 1.901650 GCTTACTTCGCGCTGCTTGT 61.902 55.000 5.56 0.00 0.00 3.16
3683 3745 2.698020 GAGCTTACTTCGCGCTGC 59.302 61.111 5.56 0.00 33.47 5.25
3688 3750 1.855360 CAATCTCGGAGCTTACTTCGC 59.145 52.381 0.00 0.00 45.13 4.70
3734 3796 3.319122 GTGCCTTGGTTTCAGATTTCAGT 59.681 43.478 0.00 0.00 0.00 3.41
3756 3818 5.604758 TCTTCTTCATGTATGTCCTCCAG 57.395 43.478 0.00 0.00 0.00 3.86
3770 3832 4.101585 TCTGCACCTTCTTCTTCTTCTTCA 59.898 41.667 0.00 0.00 0.00 3.02
3809 3874 2.092429 TGCCCAAGAACACAAGACTCTT 60.092 45.455 0.00 0.00 0.00 2.85
3905 3970 3.070018 CACCAGCAGAGTTAAGTTCAGG 58.930 50.000 0.00 0.00 0.00 3.86
3929 3994 1.133823 TGACCCACATGGCCATATCAC 60.134 52.381 20.30 8.71 37.83 3.06
3930 3995 1.220703 TGACCCACATGGCCATATCA 58.779 50.000 20.30 13.95 37.83 2.15
4003 4068 4.216257 GCAGTCATTTCCATACAACACTGT 59.784 41.667 0.00 0.00 39.75 3.55
4094 4159 6.924111 ACACCACCATGAACAATTAGAAATC 58.076 36.000 0.00 0.00 0.00 2.17
4105 4170 0.537143 TGGCAGACACCACCATGAAC 60.537 55.000 0.00 0.00 33.75 3.18
4139 4204 3.483922 CACTGCTAAATTCTAGCGTCTCG 59.516 47.826 12.12 0.00 43.13 4.04
4147 4212 5.620738 AGCCATCTCACTGCTAAATTCTA 57.379 39.130 0.00 0.00 32.56 2.10
4176 4241 7.624360 TGAAGTTGAACATGAAAGTAACTGT 57.376 32.000 0.00 0.00 0.00 3.55
4234 4299 6.752335 TGAAATTTTTCACTGCGATTTCAG 57.248 33.333 1.66 0.00 41.88 3.02
4328 4562 7.012989 GTGTTAACTGGAAAAGTAACATCAGGT 59.987 37.037 7.22 0.00 38.56 4.00
4335 4569 7.549615 ACTCTGTGTTAACTGGAAAAGTAAC 57.450 36.000 7.22 0.00 38.56 2.50
4346 4580 4.682778 TGCCTGTAACTCTGTGTTAACT 57.317 40.909 7.22 0.00 42.12 2.24
4349 4583 4.882842 TGATGCCTGTAACTCTGTGTTA 57.117 40.909 0.00 0.00 39.89 2.41
4534 4781 5.932303 CACTGGTTTGTGTACTAAGCTATGT 59.068 40.000 9.13 0.00 33.61 2.29
4613 4860 4.141181 TGGCACTAATCTGGATAGGCAAAT 60.141 41.667 0.00 0.00 0.00 2.32
4625 4872 4.101585 TGCACTAAGCTATGGCACTAATCT 59.898 41.667 3.10 0.00 45.94 2.40
4740 4987 2.224769 GGGTTGTCTTGACCTTCATCCA 60.225 50.000 0.00 0.00 37.34 3.41
4745 4992 1.608283 CGGAGGGTTGTCTTGACCTTC 60.608 57.143 0.00 0.00 41.21 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.