Multiple sequence alignment - TraesCS5B01G100700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G100700 chr5B 100.000 2994 0 0 1 2994 133894643 133891650 0.000000e+00 5529.0
1 TraesCS5B01G100700 chr5B 82.759 319 52 3 1137 1455 134543447 134543762 6.320000e-72 281.0
2 TraesCS5B01G100700 chr5B 81.818 319 55 3 1137 1455 134120838 134120523 6.360000e-67 265.0
3 TraesCS5B01G100700 chr5B 86.517 89 11 1 470 558 450577630 450577717 2.460000e-16 97.1
4 TraesCS5B01G100700 chr5A 93.866 1777 59 24 382 2151 131645900 131644167 0.000000e+00 2632.0
5 TraesCS5B01G100700 chr5A 96.345 383 14 0 1 383 131646348 131645966 5.450000e-177 630.0
6 TraesCS5B01G100700 chr5A 92.791 430 26 2 2148 2577 131644138 131643714 4.240000e-173 617.0
7 TraesCS5B01G100700 chr5A 82.132 319 54 3 1137 1455 132092325 132092010 1.370000e-68 270.0
8 TraesCS5B01G100700 chr5A 83.770 191 31 0 1265 1455 132975455 132975645 6.590000e-42 182.0
9 TraesCS5B01G100700 chr5D 94.526 1224 34 10 555 1760 120789777 120788569 0.000000e+00 1858.0
10 TraesCS5B01G100700 chr5D 93.318 434 22 4 2145 2577 120788262 120787835 4.210000e-178 634.0
11 TraesCS5B01G100700 chr5D 95.276 381 16 1 1 381 120790316 120789938 1.190000e-168 603.0
12 TraesCS5B01G100700 chr5D 88.221 416 46 3 2579 2993 81304663 81304250 7.460000e-136 494.0
13 TraesCS5B01G100700 chr5D 93.416 243 10 4 1912 2151 120788527 120788288 3.670000e-94 355.0
14 TraesCS5B01G100700 chr5D 83.072 319 51 3 1137 1455 121296416 121296731 1.360000e-73 287.0
15 TraesCS5B01G100700 chr5D 81.818 319 55 3 1137 1455 121072794 121072479 6.360000e-67 265.0
16 TraesCS5B01G100700 chr5D 91.667 60 5 0 1771 1830 120788584 120788525 1.910000e-12 84.2
17 TraesCS5B01G100700 chr2D 93.301 418 28 0 2577 2994 590782953 590783370 4.240000e-173 617.0
18 TraesCS5B01G100700 chr2D 88.043 92 11 0 467 558 383553793 383553884 3.160000e-20 110.0
19 TraesCS5B01G100700 chr2D 84.270 89 14 0 470 558 107099719 107099631 1.480000e-13 87.9
20 TraesCS5B01G100700 chr1D 92.566 417 31 0 2577 2993 81343163 81343579 1.540000e-167 599.0
21 TraesCS5B01G100700 chr3D 91.127 417 37 0 2577 2993 286772034 286772450 1.560000e-157 566.0
22 TraesCS5B01G100700 chr1A 89.688 417 43 0 2577 2993 28754113 28754529 1.580000e-147 532.0
23 TraesCS5B01G100700 chr2B 89.951 408 41 0 2577 2984 184481145 184481552 7.350000e-146 527.0
24 TraesCS5B01G100700 chr2B 86.364 88 6 2 474 561 756708436 756708517 1.140000e-14 91.6
25 TraesCS5B01G100700 chr1B 88.729 417 47 0 2577 2993 611381506 611381090 7.400000e-141 510.0
26 TraesCS5B01G100700 chr1B 90.722 97 8 1 464 559 428068838 428068742 8.710000e-26 128.0
27 TraesCS5B01G100700 chr6D 88.249 417 43 1 2577 2993 139986690 139986280 7.460000e-136 494.0
28 TraesCS5B01G100700 chr7D 87.500 408 51 0 2577 2984 514061379 514061786 3.490000e-129 472.0
29 TraesCS5B01G100700 chr4D 93.103 87 6 0 473 559 497058711 497058797 8.710000e-26 128.0
30 TraesCS5B01G100700 chr4A 88.172 93 9 2 467 558 586778567 586778658 3.160000e-20 110.0
31 TraesCS5B01G100700 chr2A 86.957 92 12 0 467 558 518329725 518329816 1.470000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G100700 chr5B 133891650 133894643 2993 True 5529.00 5529 100.0000 1 2994 1 chr5B.!!$R1 2993
1 TraesCS5B01G100700 chr5A 131643714 131646348 2634 True 1293.00 2632 94.3340 1 2577 3 chr5A.!!$R2 2576
2 TraesCS5B01G100700 chr5D 120787835 120790316 2481 True 706.84 1858 93.6406 1 2577 5 chr5D.!!$R3 2576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 519 1.825474 ACATTACGAGTCCAGACCCTG 59.175 52.381 0.0 0.0 0.0 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 2127 0.036388 TCGGTTGGGTCTTGAGCATC 60.036 55.0 2.24 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
421 489 9.950680 CAAAATTTGCAAGTAGAAGAAGACTAA 57.049 29.630 0.00 0.00 0.00 2.24
432 500 8.795513 AGTAGAAGAAGACTAACTCTTACCAAC 58.204 37.037 0.00 0.00 39.53 3.77
451 519 1.825474 ACATTACGAGTCCAGACCCTG 59.175 52.381 0.00 0.00 0.00 4.45
469 537 9.410556 CAGACCCTGTTTTTACAAGATTTTATG 57.589 33.333 0.00 0.00 0.00 1.90
482 550 8.611051 ACAAGATTTTATGTAGTACTCCCTCT 57.389 34.615 0.00 0.00 0.00 3.69
486 554 6.786967 TTTTATGTAGTACTCCCTCTGTCC 57.213 41.667 0.00 0.00 0.00 4.02
497 565 8.239478 AGTACTCCCTCTGTCCCATAATATAAA 58.761 37.037 0.00 0.00 0.00 1.40
502 570 7.236847 TCCCTCTGTCCCATAATATAAAATCGT 59.763 37.037 0.00 0.00 0.00 3.73
503 571 7.883311 CCCTCTGTCCCATAATATAAAATCGTT 59.117 37.037 0.00 0.00 0.00 3.85
519 587 5.888412 AATCGTTTTGCAAGCTAAAACAG 57.112 34.783 18.63 12.95 44.28 3.16
533 601 8.763356 CAAGCTAAAACAGTTTGCAAAATGATA 58.237 29.630 37.64 25.77 38.44 2.15
827 904 4.585955 ACCGTCTAGCAATCGTATGAAT 57.414 40.909 0.00 0.00 0.00 2.57
1045 1129 3.648009 CTCAGTATAGCAGCTACAAGCC 58.352 50.000 3.59 0.00 43.77 4.35
1048 1132 3.034635 AGTATAGCAGCTACAAGCCACT 58.965 45.455 3.59 0.00 43.77 4.00
1049 1133 2.611225 ATAGCAGCTACAAGCCACTC 57.389 50.000 3.59 0.00 43.77 3.51
1050 1134 1.266178 TAGCAGCTACAAGCCACTCA 58.734 50.000 0.00 0.00 43.77 3.41
1051 1135 0.321122 AGCAGCTACAAGCCACTCAC 60.321 55.000 0.00 0.00 43.77 3.51
1052 1136 1.630244 GCAGCTACAAGCCACTCACG 61.630 60.000 0.00 0.00 43.77 4.35
1053 1137 0.038251 CAGCTACAAGCCACTCACGA 60.038 55.000 0.00 0.00 43.77 4.35
1054 1138 0.038159 AGCTACAAGCCACTCACGAC 60.038 55.000 0.00 0.00 43.77 4.34
1055 1139 0.038159 GCTACAAGCCACTCACGACT 60.038 55.000 0.00 0.00 34.48 4.18
1103 1189 1.467920 CTCCTTCCATCACTTTGCCC 58.532 55.000 0.00 0.00 0.00 5.36
1149 1235 3.245518 CATCACAAGATGGACCGTGTA 57.754 47.619 0.00 0.00 46.33 2.90
1200 1286 0.399949 TGTTCACCCTGAGTCCCTGT 60.400 55.000 0.00 0.00 0.00 4.00
1248 1334 2.669569 CGTGACCAGCTTGGGGTG 60.670 66.667 0.00 0.00 43.37 4.61
1305 1391 1.122227 GCAAGGAGATGGAGAGAGCT 58.878 55.000 0.00 0.00 0.00 4.09
1430 1516 1.210478 GCTAGTCCCCATGCTCAAGAA 59.790 52.381 0.00 0.00 0.00 2.52
1549 1635 8.000780 AGTTGCACATTTTCCTAGAATAATCC 57.999 34.615 0.00 0.00 0.00 3.01
1708 1794 6.484364 TCTAGATGTGTGCCTATTCATTCA 57.516 37.500 0.00 0.00 0.00 2.57
1721 1807 3.915437 TTCATTCACTCGCCCTTTTTC 57.085 42.857 0.00 0.00 0.00 2.29
1799 1885 7.649705 TGCATGTTACATGTAAACGTTTTCATT 59.350 29.630 24.97 18.97 0.00 2.57
1801 1887 9.393249 CATGTTACATGTAAACGTTTTCATTCT 57.607 29.630 24.97 17.07 0.00 2.40
1857 1943 6.260936 GCTACCTGTTTGCTATGACATGTATT 59.739 38.462 0.00 0.00 30.29 1.89
1858 1944 7.441157 GCTACCTGTTTGCTATGACATGTATTA 59.559 37.037 0.00 0.00 30.29 0.98
1911 1997 7.651704 TGGATTTATATATCCGCACATGATACG 59.348 37.037 15.07 0.00 45.89 3.06
1970 2057 2.102420 CCACGGCCTCTGTATCATTGTA 59.898 50.000 0.00 0.00 0.00 2.41
2059 2148 0.321564 TGCTCAAGACCCAACCGATG 60.322 55.000 0.00 0.00 0.00 3.84
2229 2352 8.739039 TCCAAGGTTATTAAATCAACTCATGTG 58.261 33.333 0.00 0.00 0.00 3.21
2231 2354 9.912634 CAAGGTTATTAAATCAACTCATGTGTT 57.087 29.630 7.33 7.33 0.00 3.32
2360 2483 7.335422 AGTGGAACAAGTCTCTTTGCATATAAG 59.665 37.037 0.00 0.00 44.16 1.73
2361 2484 7.334421 GTGGAACAAGTCTCTTTGCATATAAGA 59.666 37.037 0.00 0.00 44.16 2.10
2362 2485 8.049117 TGGAACAAGTCTCTTTGCATATAAGAT 58.951 33.333 0.00 0.00 31.92 2.40
2363 2486 8.555361 GGAACAAGTCTCTTTGCATATAAGATC 58.445 37.037 0.00 0.00 31.66 2.75
2366 2489 7.981789 ACAAGTCTCTTTGCATATAAGATCGAA 59.018 33.333 0.00 0.00 31.66 3.71
2385 2508 3.664486 CGAACACTATATAGCACGTGAGC 59.336 47.826 22.23 4.36 0.00 4.26
2405 2528 5.478332 TGAGCTCTCATACTTTTCACTCTCA 59.522 40.000 16.19 0.00 34.14 3.27
2460 2583 6.266786 TGCGAGGAGTATCTGGAAATTATGTA 59.733 38.462 0.00 0.00 33.73 2.29
2521 2644 3.930336 ACTTCGACATGCAATCTTCTCA 58.070 40.909 0.00 0.00 0.00 3.27
2539 2662 4.017126 TCTCAGCAGAATACTCCTCGAAA 58.983 43.478 0.00 0.00 0.00 3.46
2557 2680 7.338703 TCCTCGAAACTTTAGCATACTTCTCTA 59.661 37.037 0.00 0.00 0.00 2.43
2577 2700 2.175184 CTGCGCAGAAAACCCTCACG 62.175 60.000 33.66 0.00 0.00 4.35
2578 2701 2.966309 GCGCAGAAAACCCTCACGG 61.966 63.158 0.30 0.00 37.81 4.94
2586 2709 4.098847 ACCCTCACGGTGAGTCTC 57.901 61.111 30.32 0.00 46.09 3.36
2587 2710 1.606889 ACCCTCACGGTGAGTCTCC 60.607 63.158 30.32 0.82 46.09 3.71
2593 2716 3.753434 CGGTGAGTCTCCGCTGCT 61.753 66.667 19.70 0.00 41.48 4.24
2594 2717 2.659610 GGTGAGTCTCCGCTGCTT 59.340 61.111 0.00 0.00 0.00 3.91
2595 2718 1.004440 GGTGAGTCTCCGCTGCTTT 60.004 57.895 0.00 0.00 0.00 3.51
2596 2719 0.246635 GGTGAGTCTCCGCTGCTTTA 59.753 55.000 0.00 0.00 0.00 1.85
2597 2720 1.134670 GGTGAGTCTCCGCTGCTTTAT 60.135 52.381 0.00 0.00 0.00 1.40
2598 2721 1.929836 GTGAGTCTCCGCTGCTTTATG 59.070 52.381 0.00 0.00 0.00 1.90
2599 2722 1.134699 TGAGTCTCCGCTGCTTTATGG 60.135 52.381 0.00 0.00 0.00 2.74
2600 2723 0.462759 AGTCTCCGCTGCTTTATGGC 60.463 55.000 0.00 0.00 0.00 4.40
2601 2724 1.153168 TCTCCGCTGCTTTATGGCC 60.153 57.895 0.00 0.00 0.00 5.36
2602 2725 2.124320 TCCGCTGCTTTATGGCCC 60.124 61.111 0.00 0.00 0.00 5.80
2603 2726 3.219198 CCGCTGCTTTATGGCCCC 61.219 66.667 0.00 0.00 0.00 5.80
2604 2727 2.440065 CGCTGCTTTATGGCCCCA 60.440 61.111 0.00 0.00 0.00 4.96
2605 2728 2.051518 CGCTGCTTTATGGCCCCAA 61.052 57.895 0.00 0.00 0.00 4.12
2606 2729 1.818555 GCTGCTTTATGGCCCCAAG 59.181 57.895 0.00 0.12 0.00 3.61
2607 2730 1.818555 CTGCTTTATGGCCCCAAGC 59.181 57.895 19.13 19.13 42.81 4.01
2617 2740 4.278513 CCCCAAGCCGGTGGTCAA 62.279 66.667 10.05 0.00 36.90 3.18
2618 2741 2.035626 CCCAAGCCGGTGGTCAAT 59.964 61.111 10.05 0.00 36.90 2.57
2619 2742 1.301623 CCCAAGCCGGTGGTCAATA 59.698 57.895 10.05 0.00 36.90 1.90
2620 2743 0.106719 CCCAAGCCGGTGGTCAATAT 60.107 55.000 10.05 0.00 36.90 1.28
2621 2744 1.308998 CCAAGCCGGTGGTCAATATC 58.691 55.000 1.90 0.00 33.63 1.63
2622 2745 1.134098 CCAAGCCGGTGGTCAATATCT 60.134 52.381 1.90 0.00 33.63 1.98
2623 2746 2.104111 CCAAGCCGGTGGTCAATATCTA 59.896 50.000 1.90 0.00 33.63 1.98
2624 2747 3.244561 CCAAGCCGGTGGTCAATATCTAT 60.245 47.826 1.90 0.00 33.63 1.98
2625 2748 4.020573 CCAAGCCGGTGGTCAATATCTATA 60.021 45.833 1.90 0.00 33.63 1.31
2626 2749 5.171476 CAAGCCGGTGGTCAATATCTATAG 58.829 45.833 1.90 0.00 0.00 1.31
2627 2750 4.673968 AGCCGGTGGTCAATATCTATAGA 58.326 43.478 4.57 4.57 0.00 1.98
2628 2751 4.707448 AGCCGGTGGTCAATATCTATAGAG 59.293 45.833 8.70 0.00 0.00 2.43
2629 2752 4.463186 GCCGGTGGTCAATATCTATAGAGT 59.537 45.833 8.70 0.00 0.00 3.24
2630 2753 5.047235 GCCGGTGGTCAATATCTATAGAGTT 60.047 44.000 8.70 3.21 0.00 3.01
2631 2754 6.518537 GCCGGTGGTCAATATCTATAGAGTTT 60.519 42.308 8.70 1.66 0.00 2.66
2632 2755 6.868864 CCGGTGGTCAATATCTATAGAGTTTG 59.131 42.308 16.13 16.13 0.00 2.93
2633 2756 6.366332 CGGTGGTCAATATCTATAGAGTTTGC 59.634 42.308 16.94 13.30 0.00 3.68
2634 2757 7.445945 GGTGGTCAATATCTATAGAGTTTGCT 58.554 38.462 16.94 0.89 0.00 3.91
2635 2758 7.386299 GGTGGTCAATATCTATAGAGTTTGCTG 59.614 40.741 16.94 6.63 0.00 4.41
2636 2759 7.928706 GTGGTCAATATCTATAGAGTTTGCTGT 59.071 37.037 16.94 0.00 0.00 4.40
2637 2760 8.144478 TGGTCAATATCTATAGAGTTTGCTGTC 58.856 37.037 16.94 10.20 0.00 3.51
2638 2761 8.144478 GGTCAATATCTATAGAGTTTGCTGTCA 58.856 37.037 16.94 3.58 0.00 3.58
2639 2762 9.190858 GTCAATATCTATAGAGTTTGCTGTCAG 57.809 37.037 16.94 0.00 0.00 3.51
2640 2763 8.363390 TCAATATCTATAGAGTTTGCTGTCAGG 58.637 37.037 16.94 0.46 0.00 3.86
2641 2764 8.363390 CAATATCTATAGAGTTTGCTGTCAGGA 58.637 37.037 8.70 0.00 0.00 3.86
2642 2765 5.843673 TCTATAGAGTTTGCTGTCAGGAG 57.156 43.478 0.00 0.00 0.00 3.69
2643 2766 2.751166 TAGAGTTTGCTGTCAGGAGC 57.249 50.000 1.14 0.00 39.62 4.70
2644 2767 1.055040 AGAGTTTGCTGTCAGGAGCT 58.945 50.000 1.14 1.20 39.90 4.09
2645 2768 1.419387 AGAGTTTGCTGTCAGGAGCTT 59.581 47.619 1.14 0.00 39.90 3.74
2646 2769 2.634940 AGAGTTTGCTGTCAGGAGCTTA 59.365 45.455 1.14 0.00 39.90 3.09
2647 2770 3.262915 AGAGTTTGCTGTCAGGAGCTTAT 59.737 43.478 1.14 0.00 39.90 1.73
2648 2771 3.341823 AGTTTGCTGTCAGGAGCTTATG 58.658 45.455 1.14 0.00 39.90 1.90
2649 2772 3.077359 GTTTGCTGTCAGGAGCTTATGT 58.923 45.455 1.14 0.00 39.90 2.29
2650 2773 3.423539 TTGCTGTCAGGAGCTTATGTT 57.576 42.857 1.14 0.00 39.90 2.71
2651 2774 3.423539 TGCTGTCAGGAGCTTATGTTT 57.576 42.857 1.14 0.00 39.90 2.83
2652 2775 3.754965 TGCTGTCAGGAGCTTATGTTTT 58.245 40.909 1.14 0.00 39.90 2.43
2653 2776 4.144297 TGCTGTCAGGAGCTTATGTTTTT 58.856 39.130 1.14 0.00 39.90 1.94
2680 2803 3.895232 ACCTGATGTGATACCTGTGAC 57.105 47.619 0.00 0.00 0.00 3.67
2681 2804 2.166459 ACCTGATGTGATACCTGTGACG 59.834 50.000 0.00 0.00 0.00 4.35
2682 2805 2.196749 CTGATGTGATACCTGTGACGC 58.803 52.381 0.00 0.00 0.00 5.19
2683 2806 1.548269 TGATGTGATACCTGTGACGCA 59.452 47.619 0.00 0.00 0.00 5.24
2684 2807 2.168313 TGATGTGATACCTGTGACGCAT 59.832 45.455 0.00 0.00 36.42 4.73
2685 2808 2.008752 TGTGATACCTGTGACGCATG 57.991 50.000 0.00 0.00 0.00 4.06
2686 2809 1.275010 TGTGATACCTGTGACGCATGT 59.725 47.619 2.46 2.46 0.00 3.21
2687 2810 1.660607 GTGATACCTGTGACGCATGTG 59.339 52.381 4.30 4.30 0.00 3.21
2688 2811 0.652592 GATACCTGTGACGCATGTGC 59.347 55.000 6.08 0.00 37.78 4.57
2689 2812 0.036483 ATACCTGTGACGCATGTGCA 60.036 50.000 6.08 2.64 42.21 4.57
2690 2813 0.250081 TACCTGTGACGCATGTGCAA 60.250 50.000 6.08 0.00 42.21 4.08
2691 2814 1.208358 CCTGTGACGCATGTGCAAG 59.792 57.895 6.08 6.17 42.21 4.01
2692 2815 1.229975 CCTGTGACGCATGTGCAAGA 61.230 55.000 6.08 0.00 42.21 3.02
2693 2816 0.165295 CTGTGACGCATGTGCAAGAG 59.835 55.000 6.08 0.00 42.21 2.85
2694 2817 0.249826 TGTGACGCATGTGCAAGAGA 60.250 50.000 6.08 0.00 42.21 3.10
2695 2818 0.441533 GTGACGCATGTGCAAGAGAG 59.558 55.000 6.08 0.00 42.21 3.20
2696 2819 1.293963 TGACGCATGTGCAAGAGAGC 61.294 55.000 6.08 0.00 42.21 4.09
2697 2820 1.004080 ACGCATGTGCAAGAGAGCT 60.004 52.632 6.08 0.00 42.21 4.09
2698 2821 1.018226 ACGCATGTGCAAGAGAGCTC 61.018 55.000 5.27 5.27 42.21 4.09
2699 2822 0.740164 CGCATGTGCAAGAGAGCTCT 60.740 55.000 18.28 18.28 42.21 4.09
2701 2824 1.811359 GCATGTGCAAGAGAGCTCTTT 59.189 47.619 19.36 9.80 46.95 2.52
2702 2825 2.159544 GCATGTGCAAGAGAGCTCTTTC 60.160 50.000 19.36 6.25 46.95 2.62
2703 2826 2.175878 TGTGCAAGAGAGCTCTTTCC 57.824 50.000 19.36 5.12 46.95 3.13
2704 2827 1.271054 TGTGCAAGAGAGCTCTTTCCC 60.271 52.381 19.36 4.71 46.95 3.97
2705 2828 1.003003 GTGCAAGAGAGCTCTTTCCCT 59.997 52.381 19.36 7.31 46.95 4.20
2706 2829 1.002888 TGCAAGAGAGCTCTTTCCCTG 59.997 52.381 19.36 8.83 46.95 4.45
2707 2830 1.736612 CAAGAGAGCTCTTTCCCTGC 58.263 55.000 19.36 2.66 46.95 4.85
2708 2831 1.278699 CAAGAGAGCTCTTTCCCTGCT 59.721 52.381 19.36 5.29 46.95 4.24
2709 2832 0.903942 AGAGAGCTCTTTCCCTGCTG 59.096 55.000 19.36 0.00 36.31 4.41
2710 2833 0.612744 GAGAGCTCTTTCCCTGCTGT 59.387 55.000 19.36 0.00 37.16 4.40
2711 2834 1.003003 GAGAGCTCTTTCCCTGCTGTT 59.997 52.381 19.36 0.00 37.16 3.16
2712 2835 1.163554 GAGCTCTTTCCCTGCTGTTG 58.836 55.000 6.43 0.00 37.16 3.33
2713 2836 0.475906 AGCTCTTTCCCTGCTGTTGT 59.524 50.000 0.00 0.00 35.54 3.32
2714 2837 0.877743 GCTCTTTCCCTGCTGTTGTC 59.122 55.000 0.00 0.00 0.00 3.18
2715 2838 1.815408 GCTCTTTCCCTGCTGTTGTCA 60.815 52.381 0.00 0.00 0.00 3.58
2716 2839 2.575532 CTCTTTCCCTGCTGTTGTCAA 58.424 47.619 0.00 0.00 0.00 3.18
2717 2840 2.551459 CTCTTTCCCTGCTGTTGTCAAG 59.449 50.000 0.00 0.00 0.00 3.02
2718 2841 1.610522 CTTTCCCTGCTGTTGTCAAGG 59.389 52.381 0.00 0.00 0.00 3.61
2719 2842 0.550914 TTCCCTGCTGTTGTCAAGGT 59.449 50.000 0.00 0.00 0.00 3.50
2720 2843 0.550914 TCCCTGCTGTTGTCAAGGTT 59.449 50.000 0.00 0.00 0.00 3.50
2721 2844 1.771854 TCCCTGCTGTTGTCAAGGTTA 59.228 47.619 0.00 0.00 0.00 2.85
2722 2845 1.880027 CCCTGCTGTTGTCAAGGTTAC 59.120 52.381 0.00 0.00 0.00 2.50
2723 2846 1.880027 CCTGCTGTTGTCAAGGTTACC 59.120 52.381 0.00 0.00 0.00 2.85
2724 2847 2.571212 CTGCTGTTGTCAAGGTTACCA 58.429 47.619 3.51 0.00 0.00 3.25
2725 2848 2.948979 CTGCTGTTGTCAAGGTTACCAA 59.051 45.455 3.51 0.00 0.00 3.67
2726 2849 3.561143 TGCTGTTGTCAAGGTTACCAAT 58.439 40.909 3.51 0.00 0.00 3.16
2727 2850 3.317711 TGCTGTTGTCAAGGTTACCAATG 59.682 43.478 3.51 2.30 0.00 2.82
2728 2851 3.305335 GCTGTTGTCAAGGTTACCAATGG 60.305 47.826 3.51 0.00 0.00 3.16
2729 2852 3.226777 TGTTGTCAAGGTTACCAATGGG 58.773 45.455 3.55 0.00 41.29 4.00
2730 2853 2.560981 GTTGTCAAGGTTACCAATGGGG 59.439 50.000 3.55 0.00 44.81 4.96
2742 2865 1.895131 CCAATGGGGTTTTGACAGAGG 59.105 52.381 0.00 0.00 0.00 3.69
2743 2866 1.273327 CAATGGGGTTTTGACAGAGGC 59.727 52.381 0.00 0.00 0.00 4.70
2744 2867 0.482446 ATGGGGTTTTGACAGAGGCA 59.518 50.000 0.00 0.00 0.00 4.75
2745 2868 0.467290 TGGGGTTTTGACAGAGGCAC 60.467 55.000 0.00 0.00 0.00 5.01
2746 2869 0.467290 GGGGTTTTGACAGAGGCACA 60.467 55.000 0.00 0.00 0.00 4.57
2747 2870 1.620822 GGGTTTTGACAGAGGCACAT 58.379 50.000 0.00 0.00 0.00 3.21
2748 2871 2.554344 GGGGTTTTGACAGAGGCACATA 60.554 50.000 0.00 0.00 0.00 2.29
2749 2872 3.356290 GGGTTTTGACAGAGGCACATAT 58.644 45.455 0.00 0.00 0.00 1.78
2750 2873 3.763897 GGGTTTTGACAGAGGCACATATT 59.236 43.478 0.00 0.00 0.00 1.28
2751 2874 4.380867 GGGTTTTGACAGAGGCACATATTG 60.381 45.833 0.00 0.00 0.00 1.90
2752 2875 4.218417 GGTTTTGACAGAGGCACATATTGT 59.782 41.667 0.00 0.00 0.00 2.71
2753 2876 5.278957 GGTTTTGACAGAGGCACATATTGTT 60.279 40.000 0.00 0.00 0.00 2.83
2754 2877 5.627499 TTTGACAGAGGCACATATTGTTC 57.373 39.130 0.00 0.00 0.00 3.18
2755 2878 3.261580 TGACAGAGGCACATATTGTTCG 58.738 45.455 0.00 0.00 0.00 3.95
2756 2879 3.056179 TGACAGAGGCACATATTGTTCGA 60.056 43.478 0.00 0.00 0.00 3.71
2757 2880 3.262420 ACAGAGGCACATATTGTTCGAC 58.738 45.455 0.00 0.00 0.00 4.20
2758 2881 3.261580 CAGAGGCACATATTGTTCGACA 58.738 45.455 0.00 0.00 0.00 4.35
2759 2882 3.308053 CAGAGGCACATATTGTTCGACAG 59.692 47.826 0.00 0.00 0.00 3.51
2760 2883 3.055819 AGAGGCACATATTGTTCGACAGT 60.056 43.478 0.00 0.00 0.00 3.55
2761 2884 3.674997 AGGCACATATTGTTCGACAGTT 58.325 40.909 0.00 0.00 0.00 3.16
2762 2885 3.436704 AGGCACATATTGTTCGACAGTTG 59.563 43.478 0.00 0.00 0.00 3.16
2763 2886 3.163594 GCACATATTGTTCGACAGTTGC 58.836 45.455 0.00 0.00 0.00 4.17
2764 2887 3.364864 GCACATATTGTTCGACAGTTGCA 60.365 43.478 0.00 0.00 0.00 4.08
2765 2888 4.397382 CACATATTGTTCGACAGTTGCAG 58.603 43.478 0.00 0.00 0.00 4.41
2766 2889 3.436704 ACATATTGTTCGACAGTTGCAGG 59.563 43.478 0.00 0.00 0.00 4.85
2767 2890 2.254546 ATTGTTCGACAGTTGCAGGA 57.745 45.000 0.00 0.00 0.00 3.86
2768 2891 1.295792 TTGTTCGACAGTTGCAGGAC 58.704 50.000 0.00 0.00 0.00 3.85
2769 2892 0.464036 TGTTCGACAGTTGCAGGACT 59.536 50.000 0.00 0.00 0.00 3.85
2770 2893 1.134521 TGTTCGACAGTTGCAGGACTT 60.135 47.619 0.00 0.00 0.00 3.01
2771 2894 2.101750 TGTTCGACAGTTGCAGGACTTA 59.898 45.455 0.00 0.00 0.00 2.24
2772 2895 2.724977 TCGACAGTTGCAGGACTTAG 57.275 50.000 0.00 0.00 0.00 2.18
2773 2896 1.961394 TCGACAGTTGCAGGACTTAGT 59.039 47.619 0.00 0.00 0.00 2.24
2774 2897 3.151554 TCGACAGTTGCAGGACTTAGTA 58.848 45.455 0.00 0.00 0.00 1.82
2775 2898 3.570975 TCGACAGTTGCAGGACTTAGTAA 59.429 43.478 0.00 0.00 0.00 2.24
2776 2899 3.673809 CGACAGTTGCAGGACTTAGTAAC 59.326 47.826 0.00 0.00 0.00 2.50
2777 2900 4.628074 GACAGTTGCAGGACTTAGTAACA 58.372 43.478 0.00 0.00 33.56 2.41
2778 2901 4.632153 ACAGTTGCAGGACTTAGTAACAG 58.368 43.478 0.00 0.00 33.56 3.16
2779 2902 3.997021 CAGTTGCAGGACTTAGTAACAGG 59.003 47.826 0.00 0.00 33.56 4.00
2780 2903 2.742589 GTTGCAGGACTTAGTAACAGGC 59.257 50.000 0.00 0.00 31.80 4.85
2781 2904 1.974957 TGCAGGACTTAGTAACAGGCA 59.025 47.619 0.00 0.00 0.00 4.75
2782 2905 2.370519 TGCAGGACTTAGTAACAGGCAA 59.629 45.455 0.00 0.00 0.00 4.52
2783 2906 2.742589 GCAGGACTTAGTAACAGGCAAC 59.257 50.000 0.00 0.00 0.00 4.17
2784 2907 3.335579 CAGGACTTAGTAACAGGCAACC 58.664 50.000 0.00 0.00 37.17 3.77
2785 2908 2.976882 AGGACTTAGTAACAGGCAACCA 59.023 45.455 0.00 0.00 37.17 3.67
2786 2909 3.072211 GGACTTAGTAACAGGCAACCAC 58.928 50.000 0.00 0.00 37.17 4.16
2787 2910 3.072211 GACTTAGTAACAGGCAACCACC 58.928 50.000 0.00 0.00 37.17 4.61
2788 2911 2.440253 ACTTAGTAACAGGCAACCACCA 59.560 45.455 0.00 0.00 37.17 4.17
2789 2912 2.851263 TAGTAACAGGCAACCACCAG 57.149 50.000 0.00 0.00 37.17 4.00
2790 2913 0.843984 AGTAACAGGCAACCACCAGT 59.156 50.000 0.00 0.00 37.17 4.00
2791 2914 0.951558 GTAACAGGCAACCACCAGTG 59.048 55.000 0.00 0.00 28.58 3.66
2800 2923 3.250847 CCACCAGTGGGACCTTGT 58.749 61.111 15.21 0.00 46.81 3.16
2801 2924 1.228245 CCACCAGTGGGACCTTGTG 60.228 63.158 15.21 0.00 46.81 3.33
2802 2925 1.705002 CCACCAGTGGGACCTTGTGA 61.705 60.000 15.21 0.00 46.81 3.58
2803 2926 0.182537 CACCAGTGGGACCTTGTGAA 59.817 55.000 15.21 0.00 38.05 3.18
2804 2927 0.474184 ACCAGTGGGACCTTGTGAAG 59.526 55.000 15.21 0.00 38.05 3.02
2805 2928 0.474184 CCAGTGGGACCTTGTGAAGT 59.526 55.000 0.00 0.00 35.59 3.01
2806 2929 1.133792 CCAGTGGGACCTTGTGAAGTT 60.134 52.381 0.00 0.00 35.59 2.66
2807 2930 1.949525 CAGTGGGACCTTGTGAAGTTG 59.050 52.381 0.00 0.00 0.00 3.16
2808 2931 1.133792 AGTGGGACCTTGTGAAGTTGG 60.134 52.381 0.00 0.00 0.00 3.77
2809 2932 1.133915 GTGGGACCTTGTGAAGTTGGA 60.134 52.381 0.00 0.00 0.00 3.53
2810 2933 1.142870 TGGGACCTTGTGAAGTTGGAG 59.857 52.381 0.00 0.00 0.00 3.86
2811 2934 1.545651 GGGACCTTGTGAAGTTGGAGG 60.546 57.143 0.00 0.00 0.00 4.30
2812 2935 1.239347 GACCTTGTGAAGTTGGAGGC 58.761 55.000 0.00 0.00 0.00 4.70
2813 2936 0.178990 ACCTTGTGAAGTTGGAGGCC 60.179 55.000 0.00 0.00 0.00 5.19
2814 2937 0.895559 CCTTGTGAAGTTGGAGGCCC 60.896 60.000 0.00 0.00 0.00 5.80
2815 2938 0.178992 CTTGTGAAGTTGGAGGCCCA 60.179 55.000 0.00 0.00 41.64 5.36
2816 2939 0.178992 TTGTGAAGTTGGAGGCCCAG 60.179 55.000 0.00 0.00 44.60 4.45
2817 2940 1.059584 TGTGAAGTTGGAGGCCCAGA 61.060 55.000 0.00 0.00 44.60 3.86
2818 2941 0.606673 GTGAAGTTGGAGGCCCAGAC 60.607 60.000 0.00 0.00 44.60 3.51
2819 2942 0.768221 TGAAGTTGGAGGCCCAGACT 60.768 55.000 0.00 0.00 44.60 3.24
2820 2943 0.402121 GAAGTTGGAGGCCCAGACTT 59.598 55.000 0.00 5.01 44.60 3.01
2821 2944 1.628846 GAAGTTGGAGGCCCAGACTTA 59.371 52.381 0.00 0.00 44.60 2.24
2822 2945 0.984995 AGTTGGAGGCCCAGACTTAC 59.015 55.000 0.00 0.00 44.60 2.34
2823 2946 0.690762 GTTGGAGGCCCAGACTTACA 59.309 55.000 0.00 0.00 44.60 2.41
2824 2947 1.073284 GTTGGAGGCCCAGACTTACAA 59.927 52.381 0.00 0.00 44.60 2.41
2825 2948 0.984230 TGGAGGCCCAGACTTACAAG 59.016 55.000 0.00 0.00 37.58 3.16
2826 2949 0.253327 GGAGGCCCAGACTTACAAGG 59.747 60.000 0.00 0.00 0.00 3.61
2827 2950 0.984995 GAGGCCCAGACTTACAAGGT 59.015 55.000 0.00 0.00 0.00 3.50
2828 2951 1.351350 GAGGCCCAGACTTACAAGGTT 59.649 52.381 0.00 0.00 0.00 3.50
2829 2952 1.073923 AGGCCCAGACTTACAAGGTTG 59.926 52.381 0.00 0.00 0.00 3.77
2830 2953 1.073284 GGCCCAGACTTACAAGGTTGA 59.927 52.381 0.00 0.00 0.00 3.18
2831 2954 2.290960 GGCCCAGACTTACAAGGTTGAT 60.291 50.000 0.00 0.00 0.00 2.57
2832 2955 3.421844 GCCCAGACTTACAAGGTTGATT 58.578 45.455 0.00 0.00 0.00 2.57
2833 2956 3.826729 GCCCAGACTTACAAGGTTGATTT 59.173 43.478 0.00 0.00 0.00 2.17
2834 2957 4.280929 GCCCAGACTTACAAGGTTGATTTT 59.719 41.667 0.00 0.00 0.00 1.82
2835 2958 5.564848 GCCCAGACTTACAAGGTTGATTTTC 60.565 44.000 0.00 0.00 0.00 2.29
2836 2959 5.048013 CCCAGACTTACAAGGTTGATTTTCC 60.048 44.000 0.00 0.00 0.00 3.13
2837 2960 5.048013 CCAGACTTACAAGGTTGATTTTCCC 60.048 44.000 0.00 0.00 0.00 3.97
2838 2961 5.534654 CAGACTTACAAGGTTGATTTTCCCA 59.465 40.000 0.00 0.00 0.00 4.37
2839 2962 5.535030 AGACTTACAAGGTTGATTTTCCCAC 59.465 40.000 0.00 0.00 0.00 4.61
2840 2963 5.454966 ACTTACAAGGTTGATTTTCCCACT 58.545 37.500 0.00 0.00 0.00 4.00
2841 2964 6.607019 ACTTACAAGGTTGATTTTCCCACTA 58.393 36.000 0.00 0.00 0.00 2.74
2842 2965 7.064229 ACTTACAAGGTTGATTTTCCCACTAA 58.936 34.615 0.00 0.00 0.00 2.24
2843 2966 7.230712 ACTTACAAGGTTGATTTTCCCACTAAG 59.769 37.037 0.00 0.00 0.00 2.18
2844 2967 4.832823 ACAAGGTTGATTTTCCCACTAAGG 59.167 41.667 0.00 0.00 37.03 2.69
2845 2968 5.076873 CAAGGTTGATTTTCCCACTAAGGA 58.923 41.667 0.00 0.00 41.22 3.36
2846 2969 4.923415 AGGTTGATTTTCCCACTAAGGAG 58.077 43.478 0.00 0.00 41.22 3.69
2847 2970 4.017126 GGTTGATTTTCCCACTAAGGAGG 58.983 47.826 0.00 0.00 41.22 4.30
2848 2971 4.263771 GGTTGATTTTCCCACTAAGGAGGA 60.264 45.833 0.00 0.00 41.22 3.71
2849 2972 5.510430 GTTGATTTTCCCACTAAGGAGGAT 58.490 41.667 0.00 0.00 41.22 3.24
2850 2973 5.373812 TGATTTTCCCACTAAGGAGGATC 57.626 43.478 0.00 0.00 41.22 3.36
2851 2974 4.788075 TGATTTTCCCACTAAGGAGGATCA 59.212 41.667 0.00 0.00 41.22 2.92
2852 2975 4.844349 TTTTCCCACTAAGGAGGATCAG 57.156 45.455 0.00 0.00 41.22 2.90
2853 2976 3.491766 TTCCCACTAAGGAGGATCAGT 57.508 47.619 0.00 0.00 41.22 3.41
2854 2977 3.491766 TCCCACTAAGGAGGATCAGTT 57.508 47.619 0.00 0.00 41.22 3.16
2855 2978 3.107601 TCCCACTAAGGAGGATCAGTTG 58.892 50.000 0.00 0.00 41.22 3.16
2856 2979 2.420687 CCCACTAAGGAGGATCAGTTGC 60.421 54.545 0.00 0.00 41.22 4.17
2857 2980 2.237143 CCACTAAGGAGGATCAGTTGCA 59.763 50.000 0.00 0.00 41.22 4.08
2858 2981 3.118112 CCACTAAGGAGGATCAGTTGCAT 60.118 47.826 0.00 0.00 41.22 3.96
2859 2982 4.101585 CCACTAAGGAGGATCAGTTGCATA 59.898 45.833 0.00 0.00 41.22 3.14
2860 2983 5.053145 CACTAAGGAGGATCAGTTGCATAC 58.947 45.833 0.00 0.00 36.25 2.39
2861 2984 3.567478 AAGGAGGATCAGTTGCATACC 57.433 47.619 0.00 0.00 36.25 2.73
2862 2985 1.771255 AGGAGGATCAGTTGCATACCC 59.229 52.381 0.00 0.00 36.25 3.69
2863 2986 1.771255 GGAGGATCAGTTGCATACCCT 59.229 52.381 0.00 0.00 36.25 4.34
2864 2987 2.173569 GGAGGATCAGTTGCATACCCTT 59.826 50.000 0.00 0.00 36.25 3.95
2865 2988 3.391296 GGAGGATCAGTTGCATACCCTTA 59.609 47.826 0.00 0.00 36.25 2.69
2866 2989 4.141482 GGAGGATCAGTTGCATACCCTTAA 60.141 45.833 0.00 0.00 36.25 1.85
2867 2990 5.041191 AGGATCAGTTGCATACCCTTAAG 57.959 43.478 0.00 0.00 0.00 1.85
2868 2991 4.475016 AGGATCAGTTGCATACCCTTAAGT 59.525 41.667 0.97 0.00 0.00 2.24
2869 2992 5.665812 AGGATCAGTTGCATACCCTTAAGTA 59.334 40.000 0.97 0.00 0.00 2.24
2870 2993 6.330250 AGGATCAGTTGCATACCCTTAAGTAT 59.670 38.462 0.97 0.00 33.10 2.12
2872 2995 5.680619 TCAGTTGCATACCCTTAAGTATGG 58.319 41.667 13.71 6.01 46.42 2.74
2873 2996 4.275936 CAGTTGCATACCCTTAAGTATGGC 59.724 45.833 13.71 6.68 46.42 4.40
2874 2997 4.080015 AGTTGCATACCCTTAAGTATGGCA 60.080 41.667 13.71 8.69 46.42 4.92
2875 2998 4.722526 TGCATACCCTTAAGTATGGCAT 57.277 40.909 4.88 4.88 46.42 4.40
2876 2999 4.397420 TGCATACCCTTAAGTATGGCATG 58.603 43.478 10.98 9.73 46.42 4.06
2877 3000 4.141274 TGCATACCCTTAAGTATGGCATGT 60.141 41.667 10.98 0.00 46.42 3.21
2878 3001 4.216257 GCATACCCTTAAGTATGGCATGTG 59.784 45.833 10.98 0.00 46.42 3.21
2879 3002 2.654863 ACCCTTAAGTATGGCATGTGC 58.345 47.619 10.98 0.00 41.14 4.57
2880 3003 2.025416 ACCCTTAAGTATGGCATGTGCA 60.025 45.455 10.98 0.00 44.36 4.57
2881 3004 3.023119 CCCTTAAGTATGGCATGTGCAA 58.977 45.455 10.98 0.00 44.36 4.08
2882 3005 3.446873 CCCTTAAGTATGGCATGTGCAAA 59.553 43.478 10.98 0.00 44.36 3.68
2883 3006 4.440525 CCCTTAAGTATGGCATGTGCAAAG 60.441 45.833 10.98 7.25 44.36 2.77
2884 3007 4.158394 CCTTAAGTATGGCATGTGCAAAGT 59.842 41.667 10.98 0.00 44.36 2.66
2885 3008 5.356751 CCTTAAGTATGGCATGTGCAAAGTA 59.643 40.000 10.98 0.00 44.36 2.24
2886 3009 4.701956 AAGTATGGCATGTGCAAAGTAC 57.298 40.909 10.98 0.00 44.36 2.73
2887 3010 3.684908 AGTATGGCATGTGCAAAGTACA 58.315 40.909 10.98 0.00 44.36 2.90
2888 3011 3.691118 AGTATGGCATGTGCAAAGTACAG 59.309 43.478 10.98 0.00 44.36 2.74
2889 3012 2.268762 TGGCATGTGCAAAGTACAGA 57.731 45.000 7.36 0.00 44.36 3.41
2890 3013 2.153645 TGGCATGTGCAAAGTACAGAG 58.846 47.619 7.36 0.00 44.36 3.35
2891 3014 2.154462 GGCATGTGCAAAGTACAGAGT 58.846 47.619 7.36 0.00 44.36 3.24
2892 3015 3.244387 TGGCATGTGCAAAGTACAGAGTA 60.244 43.478 7.36 0.00 44.36 2.59
2893 3016 3.125316 GGCATGTGCAAAGTACAGAGTAC 59.875 47.826 7.36 0.00 44.36 2.73
2894 3017 3.745975 GCATGTGCAAAGTACAGAGTACA 59.254 43.478 9.68 0.20 41.59 2.90
2895 3018 4.213270 GCATGTGCAAAGTACAGAGTACAA 59.787 41.667 9.68 0.00 41.59 2.41
2896 3019 5.277779 GCATGTGCAAAGTACAGAGTACAAA 60.278 40.000 9.68 0.00 41.59 2.83
2897 3020 6.568462 GCATGTGCAAAGTACAGAGTACAAAT 60.568 38.462 9.68 0.00 41.59 2.32
2898 3021 7.360861 GCATGTGCAAAGTACAGAGTACAAATA 60.361 37.037 9.68 0.00 41.59 1.40
2899 3022 8.668353 CATGTGCAAAGTACAGAGTACAAATAT 58.332 33.333 9.68 0.00 30.76 1.28
2900 3023 8.615878 TGTGCAAAGTACAGAGTACAAATATT 57.384 30.769 9.68 0.00 0.00 1.28
2901 3024 8.503196 TGTGCAAAGTACAGAGTACAAATATTG 58.497 33.333 9.68 7.41 0.00 1.90
2903 3026 8.717821 TGCAAAGTACAGAGTACAAATATTGTC 58.282 33.333 9.68 0.00 44.12 3.18
2904 3027 8.936864 GCAAAGTACAGAGTACAAATATTGTCT 58.063 33.333 9.68 0.00 44.12 3.41
2907 3030 9.436957 AAGTACAGAGTACAAATATTGTCTTGG 57.563 33.333 9.68 0.00 44.12 3.61
2908 3031 6.743575 ACAGAGTACAAATATTGTCTTGGC 57.256 37.500 0.00 0.00 44.12 4.52
2909 3032 5.648092 ACAGAGTACAAATATTGTCTTGGCC 59.352 40.000 0.00 0.00 44.12 5.36
2910 3033 5.882557 CAGAGTACAAATATTGTCTTGGCCT 59.117 40.000 3.32 0.00 44.12 5.19
2911 3034 6.375455 CAGAGTACAAATATTGTCTTGGCCTT 59.625 38.462 3.32 0.00 44.12 4.35
2912 3035 6.948309 AGAGTACAAATATTGTCTTGGCCTTT 59.052 34.615 3.32 0.00 44.12 3.11
2913 3036 6.924111 AGTACAAATATTGTCTTGGCCTTTG 58.076 36.000 3.32 5.51 44.12 2.77
2914 3037 6.719370 AGTACAAATATTGTCTTGGCCTTTGA 59.281 34.615 13.41 2.63 44.12 2.69
2915 3038 6.610075 ACAAATATTGTCTTGGCCTTTGAT 57.390 33.333 13.41 0.07 40.56 2.57
2916 3039 6.400568 ACAAATATTGTCTTGGCCTTTGATG 58.599 36.000 13.41 2.22 40.56 3.07
2917 3040 6.211184 ACAAATATTGTCTTGGCCTTTGATGA 59.789 34.615 13.41 0.00 40.56 2.92
2918 3041 6.461110 AATATTGTCTTGGCCTTTGATGAG 57.539 37.500 3.32 0.00 0.00 2.90
2919 3042 2.957402 TGTCTTGGCCTTTGATGAGT 57.043 45.000 3.32 0.00 0.00 3.41
2920 3043 4.365514 TTGTCTTGGCCTTTGATGAGTA 57.634 40.909 3.32 0.00 0.00 2.59
2921 3044 3.942829 TGTCTTGGCCTTTGATGAGTAG 58.057 45.455 3.32 0.00 0.00 2.57
2922 3045 3.582647 TGTCTTGGCCTTTGATGAGTAGA 59.417 43.478 3.32 0.00 0.00 2.59
2923 3046 4.041567 TGTCTTGGCCTTTGATGAGTAGAA 59.958 41.667 3.32 0.00 0.00 2.10
2924 3047 4.633565 GTCTTGGCCTTTGATGAGTAGAAG 59.366 45.833 3.32 0.00 0.00 2.85
2925 3048 3.634397 TGGCCTTTGATGAGTAGAAGG 57.366 47.619 3.32 0.00 41.23 3.46
2926 3049 3.181329 TGGCCTTTGATGAGTAGAAGGA 58.819 45.455 3.32 0.00 40.86 3.36
2927 3050 3.198635 TGGCCTTTGATGAGTAGAAGGAG 59.801 47.826 3.32 0.00 40.86 3.69
2928 3051 3.452627 GGCCTTTGATGAGTAGAAGGAGA 59.547 47.826 0.00 0.00 40.86 3.71
2929 3052 4.080863 GGCCTTTGATGAGTAGAAGGAGAA 60.081 45.833 0.00 0.00 40.86 2.87
2930 3053 5.115480 GCCTTTGATGAGTAGAAGGAGAAG 58.885 45.833 5.23 0.00 40.86 2.85
2931 3054 5.669477 CCTTTGATGAGTAGAAGGAGAAGG 58.331 45.833 0.00 0.00 40.86 3.46
2932 3055 5.423610 CCTTTGATGAGTAGAAGGAGAAGGA 59.576 44.000 0.00 0.00 40.86 3.36
2933 3056 5.923733 TTGATGAGTAGAAGGAGAAGGAC 57.076 43.478 0.00 0.00 0.00 3.85
2934 3057 4.282496 TGATGAGTAGAAGGAGAAGGACC 58.718 47.826 0.00 0.00 0.00 4.46
2935 3058 3.103080 TGAGTAGAAGGAGAAGGACCC 57.897 52.381 0.00 0.00 0.00 4.46
2936 3059 2.292323 TGAGTAGAAGGAGAAGGACCCC 60.292 54.545 0.00 0.00 0.00 4.95
2937 3060 1.722851 AGTAGAAGGAGAAGGACCCCA 59.277 52.381 0.00 0.00 0.00 4.96
2938 3061 2.113777 AGTAGAAGGAGAAGGACCCCAA 59.886 50.000 0.00 0.00 0.00 4.12
2939 3062 1.662686 AGAAGGAGAAGGACCCCAAG 58.337 55.000 0.00 0.00 0.00 3.61
2940 3063 0.621082 GAAGGAGAAGGACCCCAAGG 59.379 60.000 0.00 0.00 40.04 3.61
2967 3090 4.209307 CCTTTAGAGAAGGTCTGGGTTC 57.791 50.000 0.00 0.00 36.64 3.62
2968 3091 3.368531 CCTTTAGAGAAGGTCTGGGTTCG 60.369 52.174 0.00 0.00 36.64 3.95
2969 3092 1.183549 TAGAGAAGGTCTGGGTTCGC 58.816 55.000 0.00 0.00 36.64 4.70
2970 3093 0.543174 AGAGAAGGTCTGGGTTCGCT 60.543 55.000 0.00 0.00 32.57 4.93
2971 3094 0.321996 GAGAAGGTCTGGGTTCGCTT 59.678 55.000 0.00 0.00 0.00 4.68
2972 3095 0.321996 AGAAGGTCTGGGTTCGCTTC 59.678 55.000 0.00 0.00 0.00 3.86
2973 3096 0.321996 GAAGGTCTGGGTTCGCTTCT 59.678 55.000 0.00 0.00 0.00 2.85
2974 3097 0.321996 AAGGTCTGGGTTCGCTTCTC 59.678 55.000 0.00 0.00 0.00 2.87
2975 3098 0.543174 AGGTCTGGGTTCGCTTCTCT 60.543 55.000 0.00 0.00 0.00 3.10
2976 3099 0.390472 GGTCTGGGTTCGCTTCTCTG 60.390 60.000 0.00 0.00 0.00 3.35
2977 3100 0.318762 GTCTGGGTTCGCTTCTCTGT 59.681 55.000 0.00 0.00 0.00 3.41
2978 3101 1.048601 TCTGGGTTCGCTTCTCTGTT 58.951 50.000 0.00 0.00 0.00 3.16
2979 3102 1.151668 CTGGGTTCGCTTCTCTGTTG 58.848 55.000 0.00 0.00 0.00 3.33
2980 3103 0.884704 TGGGTTCGCTTCTCTGTTGC 60.885 55.000 0.00 0.00 0.00 4.17
2981 3104 0.884704 GGGTTCGCTTCTCTGTTGCA 60.885 55.000 0.00 0.00 0.00 4.08
2982 3105 0.235926 GGTTCGCTTCTCTGTTGCAC 59.764 55.000 0.00 0.00 0.00 4.57
2983 3106 0.235926 GTTCGCTTCTCTGTTGCACC 59.764 55.000 0.00 0.00 0.00 5.01
2984 3107 0.179059 TTCGCTTCTCTGTTGCACCA 60.179 50.000 0.00 0.00 0.00 4.17
2985 3108 0.035317 TCGCTTCTCTGTTGCACCAT 59.965 50.000 0.00 0.00 0.00 3.55
2986 3109 0.167470 CGCTTCTCTGTTGCACCATG 59.833 55.000 0.00 0.00 0.00 3.66
2987 3110 0.109412 GCTTCTCTGTTGCACCATGC 60.109 55.000 0.00 0.00 45.29 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.763610 TCACAATTGTGTCTGTTGTATGTGTA 59.236 34.615 31.99 9.45 45.76 2.90
149 150 4.409218 TGTGCGTCGGTAGCGTCC 62.409 66.667 14.79 5.51 37.44 4.79
209 210 4.764823 ACACGAAAAAGGCAGGATCATTTA 59.235 37.500 0.00 0.00 0.00 1.40
421 489 4.525487 TGGACTCGTAATGTTGGTAAGAGT 59.475 41.667 0.59 0.59 41.20 3.24
432 500 1.825474 ACAGGGTCTGGACTCGTAATG 59.175 52.381 0.67 0.00 36.76 1.90
469 537 2.822707 TGGGACAGAGGGAGTACTAC 57.177 55.000 0.00 0.00 0.00 2.73
486 554 9.248291 AGCTTGCAAAACGATTTTATATTATGG 57.752 29.630 0.00 0.00 0.00 2.74
497 565 5.348164 ACTGTTTTAGCTTGCAAAACGATT 58.652 33.333 15.21 3.37 44.91 3.34
533 601 9.418839 GGTACTCCCTCCGTCTTATAATATAAT 57.581 37.037 0.00 0.00 0.00 1.28
543 611 3.463048 TTAAGGTACTCCCTCCGTCTT 57.537 47.619 0.00 0.00 45.47 3.01
1028 1112 3.181475 TGAGTGGCTTGTAGCTGCTATAC 60.181 47.826 13.20 4.01 41.99 1.47
1045 1129 0.039978 AGCTCGTGAAGTCGTGAGTG 60.040 55.000 0.00 0.00 0.00 3.51
1048 1132 0.040336 GTCAGCTCGTGAAGTCGTGA 60.040 55.000 0.00 0.00 36.74 4.35
1049 1133 1.004277 GGTCAGCTCGTGAAGTCGTG 61.004 60.000 0.00 0.00 36.74 4.35
1050 1134 1.286260 GGTCAGCTCGTGAAGTCGT 59.714 57.895 0.00 0.00 36.74 4.34
1051 1135 0.318699 TTGGTCAGCTCGTGAAGTCG 60.319 55.000 0.00 0.00 36.74 4.18
1052 1136 1.140816 GTTGGTCAGCTCGTGAAGTC 58.859 55.000 0.00 0.00 36.74 3.01
1053 1137 0.464036 TGTTGGTCAGCTCGTGAAGT 59.536 50.000 0.00 0.00 36.74 3.01
1054 1138 0.861837 GTGTTGGTCAGCTCGTGAAG 59.138 55.000 0.00 0.00 36.74 3.02
1055 1139 0.531974 GGTGTTGGTCAGCTCGTGAA 60.532 55.000 0.00 0.00 40.87 3.18
1149 1235 2.158986 ACGCTCAGATGCTAGCTTCATT 60.159 45.455 26.96 9.44 36.56 2.57
1200 1286 1.734748 CACTGTGTGGCACATGCAA 59.265 52.632 24.95 9.16 43.71 4.08
1305 1391 0.972471 TGCCGAGCATCTTGAGGAGA 60.972 55.000 0.00 0.00 39.13 3.71
1430 1516 4.479993 GCCAGAGAGCACCGGCAT 62.480 66.667 0.00 0.00 44.25 4.40
1457 1543 6.181908 AGAGTTAGGTCGTCTCTTGAACTAT 58.818 40.000 0.00 0.00 35.66 2.12
1528 1614 7.917505 CACTTGGATTATTCTAGGAAAATGTGC 59.082 37.037 0.00 0.00 0.00 4.57
1549 1635 3.452755 TGACACACACTAGGTCACTTG 57.547 47.619 0.00 0.00 36.69 3.16
1584 1670 3.238788 TGTGACTGTCAAGGTAGGAGA 57.761 47.619 12.81 0.00 0.00 3.71
1599 1685 2.158449 CAGCGAGATCAAACCTTGTGAC 59.842 50.000 0.00 0.00 0.00 3.67
1611 1697 4.538917 GCTACTTAACTACCAGCGAGATC 58.461 47.826 0.00 0.00 0.00 2.75
1705 1791 1.885887 CATGGAAAAAGGGCGAGTGAA 59.114 47.619 0.00 0.00 0.00 3.18
1706 1792 1.073125 TCATGGAAAAAGGGCGAGTGA 59.927 47.619 0.00 0.00 0.00 3.41
1707 1793 1.200020 GTCATGGAAAAAGGGCGAGTG 59.800 52.381 0.00 0.00 0.00 3.51
1708 1794 1.534729 GTCATGGAAAAAGGGCGAGT 58.465 50.000 0.00 0.00 0.00 4.18
1770 1856 5.621197 ACGTTTACATGTAACATGCACAT 57.379 34.783 17.85 7.54 37.09 3.21
1771 1857 5.425577 AACGTTTACATGTAACATGCACA 57.574 34.783 17.85 3.44 0.00 4.57
1772 1858 6.415280 TGAAAACGTTTACATGTAACATGCAC 59.585 34.615 17.85 11.75 0.00 4.57
1773 1859 6.495706 TGAAAACGTTTACATGTAACATGCA 58.504 32.000 17.85 7.48 0.00 3.96
1774 1860 6.978024 TGAAAACGTTTACATGTAACATGC 57.022 33.333 17.85 7.92 0.00 4.06
1801 1887 9.985730 CCTATACTTCACCAAAATATACGGTTA 57.014 33.333 0.00 0.00 0.00 2.85
1838 1924 7.413988 GCACTGTAATACATGTCATAGCAAACA 60.414 37.037 0.00 0.00 0.00 2.83
1839 1925 6.907212 GCACTGTAATACATGTCATAGCAAAC 59.093 38.462 0.00 0.00 0.00 2.93
1857 1943 5.588648 AGCAAAGAAACAAAGTAGCACTGTA 59.411 36.000 0.00 0.00 0.00 2.74
1858 1944 4.399303 AGCAAAGAAACAAAGTAGCACTGT 59.601 37.500 0.00 0.00 0.00 3.55
2028 2117 5.196695 GGGTCTTGAGCATCTATTTTTCCT 58.803 41.667 2.24 0.00 34.92 3.36
2029 2118 4.949856 TGGGTCTTGAGCATCTATTTTTCC 59.050 41.667 2.24 0.00 34.92 3.13
2030 2119 6.325596 GTTGGGTCTTGAGCATCTATTTTTC 58.674 40.000 2.24 0.00 34.92 2.29
2038 2127 0.036388 TCGGTTGGGTCTTGAGCATC 60.036 55.000 2.24 0.00 0.00 3.91
2059 2148 6.699895 TTGAGTCATGTAATCGTGTTACAC 57.300 37.500 14.95 5.27 37.67 2.90
2142 2231 6.430925 AGCAGCAAAACTTATCTACATGTTCA 59.569 34.615 2.30 0.00 0.00 3.18
2302 2425 5.827797 TCTATAACATGTCTTTGGGGCATTC 59.172 40.000 0.00 0.00 0.00 2.67
2360 2483 5.686834 TCACGTGCTATATAGTGTTCGATC 58.313 41.667 11.67 0.00 36.16 3.69
2361 2484 5.684550 TCACGTGCTATATAGTGTTCGAT 57.315 39.130 11.67 1.51 36.16 3.59
2362 2485 4.554134 GCTCACGTGCTATATAGTGTTCGA 60.554 45.833 11.67 3.14 36.16 3.71
2363 2486 3.664486 GCTCACGTGCTATATAGTGTTCG 59.336 47.826 11.67 12.10 36.16 3.95
2366 2489 4.138290 AGAGCTCACGTGCTATATAGTGT 58.862 43.478 17.77 5.33 44.17 3.55
2385 2508 7.318893 TCACATGAGAGTGAAAAGTATGAGAG 58.681 38.462 0.00 0.00 44.92 3.20
2417 2540 4.437239 TCGCAAACCAAATTTTCACATGT 58.563 34.783 0.00 0.00 0.00 3.21
2476 2599 6.235231 TGACCCTGACTAATAATCCTGAAC 57.765 41.667 0.00 0.00 0.00 3.18
2477 2600 6.443849 AGTTGACCCTGACTAATAATCCTGAA 59.556 38.462 0.00 0.00 0.00 3.02
2521 2644 4.810191 AAGTTTCGAGGAGTATTCTGCT 57.190 40.909 0.00 0.00 44.82 4.24
2539 2662 5.583495 CGCAGTAGAGAAGTATGCTAAAGT 58.417 41.667 0.00 0.00 34.75 2.66
2557 2680 1.148273 TGAGGGTTTTCTGCGCAGT 59.852 52.632 34.70 15.79 0.00 4.40
2577 2700 0.246635 TAAAGCAGCGGAGACTCACC 59.753 55.000 4.53 0.00 0.00 4.02
2578 2701 1.929836 CATAAAGCAGCGGAGACTCAC 59.070 52.381 4.53 0.00 0.00 3.51
2579 2702 1.134699 CCATAAAGCAGCGGAGACTCA 60.135 52.381 4.53 0.00 0.00 3.41
2580 2703 1.576356 CCATAAAGCAGCGGAGACTC 58.424 55.000 0.00 0.00 0.00 3.36
2581 2704 0.462759 GCCATAAAGCAGCGGAGACT 60.463 55.000 0.00 0.00 0.00 3.24
2582 2705 1.440145 GGCCATAAAGCAGCGGAGAC 61.440 60.000 0.00 0.00 0.00 3.36
2583 2706 1.153168 GGCCATAAAGCAGCGGAGA 60.153 57.895 0.00 0.00 0.00 3.71
2584 2707 2.189499 GGGCCATAAAGCAGCGGAG 61.189 63.158 4.39 0.00 0.00 4.63
2585 2708 2.124320 GGGCCATAAAGCAGCGGA 60.124 61.111 4.39 0.00 0.00 5.54
2586 2709 3.219198 GGGGCCATAAAGCAGCGG 61.219 66.667 4.39 0.00 0.00 5.52
2587 2710 2.008268 CTTGGGGCCATAAAGCAGCG 62.008 60.000 4.39 0.00 0.00 5.18
2588 2711 1.818555 CTTGGGGCCATAAAGCAGC 59.181 57.895 4.39 0.00 0.00 5.25
2589 2712 1.818555 GCTTGGGGCCATAAAGCAG 59.181 57.895 24.55 4.64 44.53 4.24
2590 2713 4.032653 GCTTGGGGCCATAAAGCA 57.967 55.556 24.55 3.68 44.53 3.91
2600 2723 2.204865 TATTGACCACCGGCTTGGGG 62.205 60.000 15.13 5.69 44.64 4.96
2601 2724 0.106719 ATATTGACCACCGGCTTGGG 60.107 55.000 15.13 8.14 44.64 4.12
2602 2725 1.134098 AGATATTGACCACCGGCTTGG 60.134 52.381 9.51 9.51 46.41 3.61
2603 2726 2.332063 AGATATTGACCACCGGCTTG 57.668 50.000 0.00 0.00 0.00 4.01
2604 2727 5.084519 TCTATAGATATTGACCACCGGCTT 58.915 41.667 0.00 0.00 0.00 4.35
2605 2728 4.673968 TCTATAGATATTGACCACCGGCT 58.326 43.478 0.00 0.00 0.00 5.52
2606 2729 4.463186 ACTCTATAGATATTGACCACCGGC 59.537 45.833 0.00 0.00 0.00 6.13
2607 2730 6.591750 AACTCTATAGATATTGACCACCGG 57.408 41.667 2.11 0.00 0.00 5.28
2608 2731 6.366332 GCAAACTCTATAGATATTGACCACCG 59.634 42.308 22.41 4.45 0.00 4.94
2609 2732 7.386299 CAGCAAACTCTATAGATATTGACCACC 59.614 40.741 22.41 10.56 0.00 4.61
2610 2733 7.928706 ACAGCAAACTCTATAGATATTGACCAC 59.071 37.037 22.41 10.80 0.00 4.16
2611 2734 8.023021 ACAGCAAACTCTATAGATATTGACCA 57.977 34.615 22.41 0.00 0.00 4.02
2612 2735 8.144478 TGACAGCAAACTCTATAGATATTGACC 58.856 37.037 22.41 11.52 0.00 4.02
2613 2736 9.190858 CTGACAGCAAACTCTATAGATATTGAC 57.809 37.037 22.41 16.06 0.00 3.18
2614 2737 8.363390 CCTGACAGCAAACTCTATAGATATTGA 58.637 37.037 22.41 8.02 0.00 2.57
2615 2738 8.363390 TCCTGACAGCAAACTCTATAGATATTG 58.637 37.037 17.27 17.27 0.00 1.90
2616 2739 8.484214 TCCTGACAGCAAACTCTATAGATATT 57.516 34.615 2.11 0.00 0.00 1.28
2617 2740 7.309744 GCTCCTGACAGCAAACTCTATAGATAT 60.310 40.741 2.11 0.00 39.43 1.63
2618 2741 6.015856 GCTCCTGACAGCAAACTCTATAGATA 60.016 42.308 2.11 0.00 39.43 1.98
2619 2742 5.221422 GCTCCTGACAGCAAACTCTATAGAT 60.221 44.000 2.11 0.00 39.43 1.98
2620 2743 4.098654 GCTCCTGACAGCAAACTCTATAGA 59.901 45.833 1.69 1.69 39.43 1.98
2621 2744 4.099266 AGCTCCTGACAGCAAACTCTATAG 59.901 45.833 0.00 0.00 42.40 1.31
2622 2745 4.026744 AGCTCCTGACAGCAAACTCTATA 58.973 43.478 0.00 0.00 42.40 1.31
2623 2746 2.836981 AGCTCCTGACAGCAAACTCTAT 59.163 45.455 0.00 0.00 42.40 1.98
2624 2747 2.251818 AGCTCCTGACAGCAAACTCTA 58.748 47.619 0.00 0.00 42.40 2.43
2625 2748 1.055040 AGCTCCTGACAGCAAACTCT 58.945 50.000 0.00 0.00 42.40 3.24
2626 2749 1.889545 AAGCTCCTGACAGCAAACTC 58.110 50.000 0.00 0.00 42.40 3.01
2627 2750 3.244700 ACATAAGCTCCTGACAGCAAACT 60.245 43.478 0.00 0.00 42.40 2.66
2628 2751 3.077359 ACATAAGCTCCTGACAGCAAAC 58.923 45.455 0.00 0.00 42.40 2.93
2629 2752 3.423539 ACATAAGCTCCTGACAGCAAA 57.576 42.857 0.00 0.00 42.40 3.68
2630 2753 3.423539 AACATAAGCTCCTGACAGCAA 57.576 42.857 0.00 0.00 42.40 3.91
2631 2754 3.423539 AAACATAAGCTCCTGACAGCA 57.576 42.857 0.00 0.00 42.40 4.41
2632 2755 4.773323 AAAAACATAAGCTCCTGACAGC 57.227 40.909 0.00 0.00 39.99 4.40
2660 2783 2.166459 CGTCACAGGTATCACATCAGGT 59.834 50.000 0.00 0.00 0.00 4.00
2661 2784 2.814269 CGTCACAGGTATCACATCAGG 58.186 52.381 0.00 0.00 0.00 3.86
2662 2785 2.196749 GCGTCACAGGTATCACATCAG 58.803 52.381 0.00 0.00 0.00 2.90
2663 2786 1.548269 TGCGTCACAGGTATCACATCA 59.452 47.619 0.00 0.00 0.00 3.07
2664 2787 2.293677 TGCGTCACAGGTATCACATC 57.706 50.000 0.00 0.00 0.00 3.06
2665 2788 2.093500 ACATGCGTCACAGGTATCACAT 60.093 45.455 0.00 0.00 42.62 3.21
2666 2789 1.275010 ACATGCGTCACAGGTATCACA 59.725 47.619 0.00 0.00 42.62 3.58
2667 2790 1.660607 CACATGCGTCACAGGTATCAC 59.339 52.381 0.00 0.00 42.53 3.06
2668 2791 2.006552 GCACATGCGTCACAGGTATCA 61.007 52.381 0.00 0.00 42.53 2.15
2669 2792 0.652592 GCACATGCGTCACAGGTATC 59.347 55.000 0.00 0.00 42.53 2.24
2670 2793 0.036483 TGCACATGCGTCACAGGTAT 60.036 50.000 0.00 0.00 42.53 2.73
2671 2794 0.250081 TTGCACATGCGTCACAGGTA 60.250 50.000 0.00 0.00 42.53 3.08
2672 2795 1.509644 CTTGCACATGCGTCACAGGT 61.510 55.000 0.00 0.00 46.12 4.00
2673 2796 1.208358 CTTGCACATGCGTCACAGG 59.792 57.895 0.00 0.00 45.83 4.00
2674 2797 0.165295 CTCTTGCACATGCGTCACAG 59.835 55.000 0.00 0.00 45.83 3.66
2675 2798 0.249826 TCTCTTGCACATGCGTCACA 60.250 50.000 0.00 0.00 45.83 3.58
2676 2799 0.441533 CTCTCTTGCACATGCGTCAC 59.558 55.000 0.00 0.00 45.83 3.67
2677 2800 1.293963 GCTCTCTTGCACATGCGTCA 61.294 55.000 0.00 0.00 45.83 4.35
2678 2801 1.018226 AGCTCTCTTGCACATGCGTC 61.018 55.000 0.00 0.00 45.83 5.19
2679 2802 1.004080 AGCTCTCTTGCACATGCGT 60.004 52.632 0.00 0.00 45.83 5.24
2680 2803 0.740164 AGAGCTCTCTTGCACATGCG 60.740 55.000 11.45 0.00 36.31 4.73
2681 2804 3.156157 AGAGCTCTCTTGCACATGC 57.844 52.632 11.45 0.00 36.31 4.06
2682 2805 4.727556 GGGAAAGAGCTCTCTTGCACATG 61.728 52.174 18.55 0.00 45.91 3.21
2683 2806 2.617532 GGGAAAGAGCTCTCTTGCACAT 60.618 50.000 18.55 0.00 45.91 3.21
2684 2807 1.271054 GGGAAAGAGCTCTCTTGCACA 60.271 52.381 18.55 0.00 45.91 4.57
2690 2813 0.903942 CAGCAGGGAAAGAGCTCTCT 59.096 55.000 18.55 1.58 42.75 3.10
2691 2814 0.612744 ACAGCAGGGAAAGAGCTCTC 59.387 55.000 18.55 5.46 36.26 3.20
2692 2815 1.063183 AACAGCAGGGAAAGAGCTCT 58.937 50.000 11.45 11.45 36.26 4.09
2693 2816 1.163554 CAACAGCAGGGAAAGAGCTC 58.836 55.000 5.27 5.27 36.26 4.09
2694 2817 0.475906 ACAACAGCAGGGAAAGAGCT 59.524 50.000 0.00 0.00 39.63 4.09
2695 2818 0.877743 GACAACAGCAGGGAAAGAGC 59.122 55.000 0.00 0.00 0.00 4.09
2696 2819 2.260844 TGACAACAGCAGGGAAAGAG 57.739 50.000 0.00 0.00 0.00 2.85
2697 2820 2.575532 CTTGACAACAGCAGGGAAAGA 58.424 47.619 0.00 0.00 0.00 2.52
2698 2821 1.610522 CCTTGACAACAGCAGGGAAAG 59.389 52.381 0.00 0.00 34.69 2.62
2699 2822 1.064017 ACCTTGACAACAGCAGGGAAA 60.064 47.619 0.00 0.00 36.15 3.13
2700 2823 0.550914 ACCTTGACAACAGCAGGGAA 59.449 50.000 0.00 0.00 36.15 3.97
2701 2824 0.550914 AACCTTGACAACAGCAGGGA 59.449 50.000 0.00 0.00 36.15 4.20
2702 2825 1.880027 GTAACCTTGACAACAGCAGGG 59.120 52.381 0.00 0.00 38.37 4.45
2703 2826 1.880027 GGTAACCTTGACAACAGCAGG 59.120 52.381 0.00 0.00 32.13 4.85
2704 2827 2.571212 TGGTAACCTTGACAACAGCAG 58.429 47.619 0.00 0.00 0.00 4.24
2705 2828 2.719531 TGGTAACCTTGACAACAGCA 57.280 45.000 0.00 0.00 0.00 4.41
2706 2829 3.305335 CCATTGGTAACCTTGACAACAGC 60.305 47.826 0.00 0.00 0.00 4.40
2707 2830 3.255642 CCCATTGGTAACCTTGACAACAG 59.744 47.826 1.20 0.00 0.00 3.16
2708 2831 3.226777 CCCATTGGTAACCTTGACAACA 58.773 45.455 1.20 0.00 0.00 3.33
2709 2832 2.560981 CCCCATTGGTAACCTTGACAAC 59.439 50.000 1.20 0.00 0.00 3.32
2710 2833 2.883026 CCCCATTGGTAACCTTGACAA 58.117 47.619 1.20 0.00 0.00 3.18
2711 2834 2.595750 CCCCATTGGTAACCTTGACA 57.404 50.000 1.20 0.00 0.00 3.58
2722 2845 1.895131 CCTCTGTCAAAACCCCATTGG 59.105 52.381 0.00 0.00 41.37 3.16
2723 2846 1.273327 GCCTCTGTCAAAACCCCATTG 59.727 52.381 0.00 0.00 0.00 2.82
2724 2847 1.133199 TGCCTCTGTCAAAACCCCATT 60.133 47.619 0.00 0.00 0.00 3.16
2725 2848 0.482446 TGCCTCTGTCAAAACCCCAT 59.518 50.000 0.00 0.00 0.00 4.00
2726 2849 0.467290 GTGCCTCTGTCAAAACCCCA 60.467 55.000 0.00 0.00 0.00 4.96
2727 2850 0.467290 TGTGCCTCTGTCAAAACCCC 60.467 55.000 0.00 0.00 0.00 4.95
2728 2851 1.620822 ATGTGCCTCTGTCAAAACCC 58.379 50.000 0.00 0.00 0.00 4.11
2729 2852 4.218417 ACAATATGTGCCTCTGTCAAAACC 59.782 41.667 0.00 0.00 0.00 3.27
2730 2853 5.376854 ACAATATGTGCCTCTGTCAAAAC 57.623 39.130 0.00 0.00 0.00 2.43
2731 2854 5.334802 CGAACAATATGTGCCTCTGTCAAAA 60.335 40.000 0.00 0.00 0.00 2.44
2732 2855 4.154015 CGAACAATATGTGCCTCTGTCAAA 59.846 41.667 0.00 0.00 0.00 2.69
2733 2856 3.684305 CGAACAATATGTGCCTCTGTCAA 59.316 43.478 0.00 0.00 0.00 3.18
2734 2857 3.056179 TCGAACAATATGTGCCTCTGTCA 60.056 43.478 0.00 0.00 0.00 3.58
2735 2858 3.307242 GTCGAACAATATGTGCCTCTGTC 59.693 47.826 0.00 0.00 0.00 3.51
2736 2859 3.262420 GTCGAACAATATGTGCCTCTGT 58.738 45.455 0.00 0.00 0.00 3.41
2737 2860 3.261580 TGTCGAACAATATGTGCCTCTG 58.738 45.455 0.00 0.00 0.00 3.35
2738 2861 3.055819 ACTGTCGAACAATATGTGCCTCT 60.056 43.478 0.00 0.00 0.00 3.69
2739 2862 3.262420 ACTGTCGAACAATATGTGCCTC 58.738 45.455 0.00 0.00 0.00 4.70
2740 2863 3.334583 ACTGTCGAACAATATGTGCCT 57.665 42.857 0.00 0.00 0.00 4.75
2741 2864 3.747193 CAACTGTCGAACAATATGTGCC 58.253 45.455 0.00 0.00 0.00 5.01
2742 2865 3.163594 GCAACTGTCGAACAATATGTGC 58.836 45.455 0.00 0.00 0.00 4.57
2743 2866 4.397382 CTGCAACTGTCGAACAATATGTG 58.603 43.478 0.00 0.00 0.00 3.21
2744 2867 3.436704 CCTGCAACTGTCGAACAATATGT 59.563 43.478 0.00 0.00 0.00 2.29
2745 2868 3.684305 TCCTGCAACTGTCGAACAATATG 59.316 43.478 0.00 0.00 0.00 1.78
2746 2869 3.684788 GTCCTGCAACTGTCGAACAATAT 59.315 43.478 0.00 0.00 0.00 1.28
2747 2870 3.064207 GTCCTGCAACTGTCGAACAATA 58.936 45.455 0.00 0.00 0.00 1.90
2748 2871 1.873591 GTCCTGCAACTGTCGAACAAT 59.126 47.619 0.00 0.00 0.00 2.71
2749 2872 1.134521 AGTCCTGCAACTGTCGAACAA 60.135 47.619 0.00 0.00 0.00 2.83
2750 2873 0.464036 AGTCCTGCAACTGTCGAACA 59.536 50.000 0.00 0.00 0.00 3.18
2751 2874 1.583054 AAGTCCTGCAACTGTCGAAC 58.417 50.000 0.00 0.00 0.00 3.95
2752 2875 2.364324 ACTAAGTCCTGCAACTGTCGAA 59.636 45.455 0.00 0.00 0.00 3.71
2753 2876 1.961394 ACTAAGTCCTGCAACTGTCGA 59.039 47.619 0.00 0.00 0.00 4.20
2754 2877 2.440539 ACTAAGTCCTGCAACTGTCG 57.559 50.000 0.00 0.00 0.00 4.35
2755 2878 4.628074 TGTTACTAAGTCCTGCAACTGTC 58.372 43.478 0.00 0.00 0.00 3.51
2756 2879 4.503296 CCTGTTACTAAGTCCTGCAACTGT 60.503 45.833 0.00 0.00 0.00 3.55
2757 2880 3.997021 CCTGTTACTAAGTCCTGCAACTG 59.003 47.826 0.00 0.00 0.00 3.16
2758 2881 3.557264 GCCTGTTACTAAGTCCTGCAACT 60.557 47.826 0.00 0.00 0.00 3.16
2759 2882 2.742589 GCCTGTTACTAAGTCCTGCAAC 59.257 50.000 0.00 0.00 0.00 4.17
2760 2883 2.370519 TGCCTGTTACTAAGTCCTGCAA 59.629 45.455 0.00 0.00 0.00 4.08
2761 2884 1.974957 TGCCTGTTACTAAGTCCTGCA 59.025 47.619 0.00 0.00 0.00 4.41
2762 2885 2.742589 GTTGCCTGTTACTAAGTCCTGC 59.257 50.000 0.00 0.00 0.00 4.85
2763 2886 3.244422 TGGTTGCCTGTTACTAAGTCCTG 60.244 47.826 0.00 0.00 0.00 3.86
2764 2887 2.976882 TGGTTGCCTGTTACTAAGTCCT 59.023 45.455 0.00 0.00 0.00 3.85
2765 2888 3.072211 GTGGTTGCCTGTTACTAAGTCC 58.928 50.000 0.00 0.00 0.00 3.85
2766 2889 3.072211 GGTGGTTGCCTGTTACTAAGTC 58.928 50.000 0.00 0.00 0.00 3.01
2767 2890 2.440253 TGGTGGTTGCCTGTTACTAAGT 59.560 45.455 0.00 0.00 0.00 2.24
2768 2891 3.074412 CTGGTGGTTGCCTGTTACTAAG 58.926 50.000 0.00 0.00 0.00 2.18
2769 2892 2.440253 ACTGGTGGTTGCCTGTTACTAA 59.560 45.455 0.00 0.00 37.40 2.24
2770 2893 2.051692 ACTGGTGGTTGCCTGTTACTA 58.948 47.619 0.00 0.00 37.40 1.82
2771 2894 0.843984 ACTGGTGGTTGCCTGTTACT 59.156 50.000 0.00 0.00 37.40 2.24
2772 2895 0.951558 CACTGGTGGTTGCCTGTTAC 59.048 55.000 0.00 0.00 38.40 2.50
2773 2896 0.179004 CCACTGGTGGTTGCCTGTTA 60.179 55.000 11.29 0.00 45.53 2.41
2774 2897 1.455587 CCACTGGTGGTTGCCTGTT 60.456 57.895 11.29 0.00 45.53 3.16
2775 2898 2.195683 CCACTGGTGGTTGCCTGT 59.804 61.111 11.29 0.00 45.53 4.00
2784 2907 0.182537 TTCACAAGGTCCCACTGGTG 59.817 55.000 0.00 0.00 42.57 4.17
2785 2908 0.474184 CTTCACAAGGTCCCACTGGT 59.526 55.000 0.00 0.00 0.00 4.00
2786 2909 0.474184 ACTTCACAAGGTCCCACTGG 59.526 55.000 0.00 0.00 0.00 4.00
2787 2910 1.949525 CAACTTCACAAGGTCCCACTG 59.050 52.381 0.00 0.00 0.00 3.66
2788 2911 1.133792 CCAACTTCACAAGGTCCCACT 60.134 52.381 0.00 0.00 0.00 4.00
2789 2912 1.133915 TCCAACTTCACAAGGTCCCAC 60.134 52.381 0.00 0.00 0.00 4.61
2790 2913 1.142870 CTCCAACTTCACAAGGTCCCA 59.857 52.381 0.00 0.00 0.00 4.37
2791 2914 1.545651 CCTCCAACTTCACAAGGTCCC 60.546 57.143 0.00 0.00 0.00 4.46
2792 2915 1.897560 CCTCCAACTTCACAAGGTCC 58.102 55.000 0.00 0.00 0.00 4.46
2793 2916 1.239347 GCCTCCAACTTCACAAGGTC 58.761 55.000 0.00 0.00 0.00 3.85
2794 2917 0.178990 GGCCTCCAACTTCACAAGGT 60.179 55.000 0.00 0.00 0.00 3.50
2795 2918 0.895559 GGGCCTCCAACTTCACAAGG 60.896 60.000 0.84 0.00 0.00 3.61
2796 2919 0.178992 TGGGCCTCCAACTTCACAAG 60.179 55.000 4.53 0.00 40.73 3.16
2797 2920 0.178992 CTGGGCCTCCAACTTCACAA 60.179 55.000 4.53 0.00 43.51 3.33
2798 2921 1.059584 TCTGGGCCTCCAACTTCACA 61.060 55.000 4.53 0.00 43.51 3.58
2799 2922 0.606673 GTCTGGGCCTCCAACTTCAC 60.607 60.000 4.53 0.00 43.51 3.18
2800 2923 0.768221 AGTCTGGGCCTCCAACTTCA 60.768 55.000 4.53 0.00 43.51 3.02
2801 2924 0.402121 AAGTCTGGGCCTCCAACTTC 59.598 55.000 4.53 0.00 43.51 3.01
2802 2925 1.351350 GTAAGTCTGGGCCTCCAACTT 59.649 52.381 4.53 11.29 43.51 2.66
2803 2926 0.984995 GTAAGTCTGGGCCTCCAACT 59.015 55.000 4.53 0.00 43.51 3.16
2804 2927 0.690762 TGTAAGTCTGGGCCTCCAAC 59.309 55.000 4.53 0.00 43.51 3.77
2805 2928 1.351017 CTTGTAAGTCTGGGCCTCCAA 59.649 52.381 4.53 0.00 43.51 3.53
2806 2929 0.984230 CTTGTAAGTCTGGGCCTCCA 59.016 55.000 4.53 0.00 41.58 3.86
2807 2930 0.253327 CCTTGTAAGTCTGGGCCTCC 59.747 60.000 4.53 0.00 0.00 4.30
2808 2931 0.984995 ACCTTGTAAGTCTGGGCCTC 59.015 55.000 4.53 0.00 0.00 4.70
2809 2932 1.073923 CAACCTTGTAAGTCTGGGCCT 59.926 52.381 4.53 0.00 0.00 5.19
2810 2933 1.073284 TCAACCTTGTAAGTCTGGGCC 59.927 52.381 0.00 0.00 0.00 5.80
2811 2934 2.561478 TCAACCTTGTAAGTCTGGGC 57.439 50.000 0.00 0.00 0.00 5.36
2812 2935 5.048013 GGAAAATCAACCTTGTAAGTCTGGG 60.048 44.000 0.00 0.00 0.00 4.45
2813 2936 5.048013 GGGAAAATCAACCTTGTAAGTCTGG 60.048 44.000 0.00 0.00 0.00 3.86
2814 2937 5.534654 TGGGAAAATCAACCTTGTAAGTCTG 59.465 40.000 0.00 0.00 0.00 3.51
2815 2938 5.535030 GTGGGAAAATCAACCTTGTAAGTCT 59.465 40.000 0.00 0.00 0.00 3.24
2816 2939 5.535030 AGTGGGAAAATCAACCTTGTAAGTC 59.465 40.000 0.00 0.00 0.00 3.01
2817 2940 5.454966 AGTGGGAAAATCAACCTTGTAAGT 58.545 37.500 0.00 0.00 0.00 2.24
2818 2941 7.309194 CCTTAGTGGGAAAATCAACCTTGTAAG 60.309 40.741 0.00 0.00 0.00 2.34
2819 2942 6.492087 CCTTAGTGGGAAAATCAACCTTGTAA 59.508 38.462 0.00 0.00 0.00 2.41
2820 2943 6.007703 CCTTAGTGGGAAAATCAACCTTGTA 58.992 40.000 0.00 0.00 0.00 2.41
2821 2944 4.832823 CCTTAGTGGGAAAATCAACCTTGT 59.167 41.667 0.00 0.00 0.00 3.16
2822 2945 5.076873 TCCTTAGTGGGAAAATCAACCTTG 58.923 41.667 0.00 0.00 36.20 3.61
2823 2946 5.325239 CTCCTTAGTGGGAAAATCAACCTT 58.675 41.667 0.00 0.00 34.66 3.50
2824 2947 4.263949 CCTCCTTAGTGGGAAAATCAACCT 60.264 45.833 0.00 0.00 34.66 3.50
2825 2948 4.017126 CCTCCTTAGTGGGAAAATCAACC 58.983 47.826 0.00 0.00 34.66 3.77
2826 2949 4.918588 TCCTCCTTAGTGGGAAAATCAAC 58.081 43.478 0.00 0.00 34.66 3.18
2827 2950 5.252863 TGATCCTCCTTAGTGGGAAAATCAA 59.747 40.000 0.00 0.00 35.39 2.57
2828 2951 4.788075 TGATCCTCCTTAGTGGGAAAATCA 59.212 41.667 0.00 0.00 35.68 2.57
2829 2952 5.104318 ACTGATCCTCCTTAGTGGGAAAATC 60.104 44.000 0.00 0.00 34.66 2.17
2830 2953 4.790790 ACTGATCCTCCTTAGTGGGAAAAT 59.209 41.667 0.00 0.00 34.66 1.82
2831 2954 4.175962 ACTGATCCTCCTTAGTGGGAAAA 58.824 43.478 0.00 0.00 34.66 2.29
2832 2955 3.803340 ACTGATCCTCCTTAGTGGGAAA 58.197 45.455 0.00 0.00 34.66 3.13
2833 2956 3.491766 ACTGATCCTCCTTAGTGGGAA 57.508 47.619 0.00 0.00 34.66 3.97
2834 2957 3.107601 CAACTGATCCTCCTTAGTGGGA 58.892 50.000 0.00 0.00 36.20 4.37
2835 2958 2.420687 GCAACTGATCCTCCTTAGTGGG 60.421 54.545 0.00 0.00 36.20 4.61
2836 2959 2.237143 TGCAACTGATCCTCCTTAGTGG 59.763 50.000 0.00 0.00 37.10 4.00
2837 2960 3.616956 TGCAACTGATCCTCCTTAGTG 57.383 47.619 0.00 0.00 0.00 2.74
2838 2961 4.101741 GGTATGCAACTGATCCTCCTTAGT 59.898 45.833 0.00 0.00 0.00 2.24
2839 2962 4.503991 GGGTATGCAACTGATCCTCCTTAG 60.504 50.000 0.00 0.00 0.00 2.18
2840 2963 3.391296 GGGTATGCAACTGATCCTCCTTA 59.609 47.826 0.00 0.00 0.00 2.69
2841 2964 2.173569 GGGTATGCAACTGATCCTCCTT 59.826 50.000 0.00 0.00 0.00 3.36
2842 2965 1.771255 GGGTATGCAACTGATCCTCCT 59.229 52.381 0.00 0.00 0.00 3.69
2843 2966 1.771255 AGGGTATGCAACTGATCCTCC 59.229 52.381 0.00 0.00 0.00 4.30
2844 2967 3.567478 AAGGGTATGCAACTGATCCTC 57.433 47.619 0.00 0.00 0.00 3.71
2845 2968 4.475016 ACTTAAGGGTATGCAACTGATCCT 59.525 41.667 7.53 0.00 0.00 3.24
2846 2969 4.781934 ACTTAAGGGTATGCAACTGATCC 58.218 43.478 7.53 0.00 0.00 3.36
2847 2970 6.428159 CCATACTTAAGGGTATGCAACTGATC 59.572 42.308 7.53 0.00 44.35 2.92
2848 2971 6.299141 CCATACTTAAGGGTATGCAACTGAT 58.701 40.000 7.53 0.00 44.35 2.90
2849 2972 5.680619 CCATACTTAAGGGTATGCAACTGA 58.319 41.667 7.53 0.00 44.35 3.41
2850 2973 4.275936 GCCATACTTAAGGGTATGCAACTG 59.724 45.833 7.53 0.00 44.35 3.16
2851 2974 4.080015 TGCCATACTTAAGGGTATGCAACT 60.080 41.667 7.53 0.00 44.35 3.16
2852 2975 4.204012 TGCCATACTTAAGGGTATGCAAC 58.796 43.478 7.53 1.86 44.35 4.17
2853 2976 4.511786 TGCCATACTTAAGGGTATGCAA 57.488 40.909 7.53 0.00 44.35 4.08
2854 2977 4.141274 ACATGCCATACTTAAGGGTATGCA 60.141 41.667 19.84 15.28 45.26 3.96
2855 2978 4.216257 CACATGCCATACTTAAGGGTATGC 59.784 45.833 19.84 11.29 45.26 3.14
2856 2979 4.216257 GCACATGCCATACTTAAGGGTATG 59.784 45.833 18.91 18.91 46.33 2.39
2857 2980 4.141274 TGCACATGCCATACTTAAGGGTAT 60.141 41.667 7.53 0.85 41.18 2.73
2858 2981 3.201045 TGCACATGCCATACTTAAGGGTA 59.799 43.478 7.53 0.00 41.18 3.69
2859 2982 2.025416 TGCACATGCCATACTTAAGGGT 60.025 45.455 7.53 0.00 41.18 4.34
2860 2983 2.653726 TGCACATGCCATACTTAAGGG 58.346 47.619 7.53 0.00 41.18 3.95
2861 2984 4.158394 ACTTTGCACATGCCATACTTAAGG 59.842 41.667 7.53 0.00 41.18 2.69
2862 2985 5.314923 ACTTTGCACATGCCATACTTAAG 57.685 39.130 0.00 0.00 41.18 1.85
2863 2986 5.707764 TGTACTTTGCACATGCCATACTTAA 59.292 36.000 0.49 0.00 41.18 1.85
2864 2987 5.249420 TGTACTTTGCACATGCCATACTTA 58.751 37.500 0.49 0.00 41.18 2.24
2865 2988 4.078537 TGTACTTTGCACATGCCATACTT 58.921 39.130 0.49 0.00 41.18 2.24
2866 2989 3.684908 TGTACTTTGCACATGCCATACT 58.315 40.909 0.49 0.00 41.18 2.12
2867 2990 3.689161 TCTGTACTTTGCACATGCCATAC 59.311 43.478 0.49 0.05 41.18 2.39
2868 2991 3.940852 CTCTGTACTTTGCACATGCCATA 59.059 43.478 0.49 0.00 41.18 2.74
2869 2992 2.751259 CTCTGTACTTTGCACATGCCAT 59.249 45.455 0.49 0.00 41.18 4.40
2870 2993 2.153645 CTCTGTACTTTGCACATGCCA 58.846 47.619 0.49 0.00 41.18 4.92
2871 2994 2.154462 ACTCTGTACTTTGCACATGCC 58.846 47.619 0.49 0.00 41.18 4.40
2872 2995 3.745975 TGTACTCTGTACTTTGCACATGC 59.254 43.478 8.94 0.00 42.50 4.06
2873 2996 5.922739 TTGTACTCTGTACTTTGCACATG 57.077 39.130 8.94 0.00 0.00 3.21
2874 2997 8.792830 ATATTTGTACTCTGTACTTTGCACAT 57.207 30.769 8.94 0.00 0.00 3.21
2875 2998 8.503196 CAATATTTGTACTCTGTACTTTGCACA 58.497 33.333 8.94 0.00 0.00 4.57
2876 2999 8.504005 ACAATATTTGTACTCTGTACTTTGCAC 58.496 33.333 8.94 0.00 43.27 4.57
2877 3000 8.615878 ACAATATTTGTACTCTGTACTTTGCA 57.384 30.769 8.94 0.00 43.27 4.08
2878 3001 8.936864 AGACAATATTTGTACTCTGTACTTTGC 58.063 33.333 8.94 0.00 45.52 3.68
2881 3004 9.436957 CCAAGACAATATTTGTACTCTGTACTT 57.563 33.333 8.94 0.00 45.52 2.24
2882 3005 7.549488 GCCAAGACAATATTTGTACTCTGTACT 59.451 37.037 8.94 0.00 45.52 2.73
2883 3006 7.201617 GGCCAAGACAATATTTGTACTCTGTAC 60.202 40.741 0.00 1.33 45.52 2.90
2884 3007 6.821665 GGCCAAGACAATATTTGTACTCTGTA 59.178 38.462 0.00 0.00 45.52 2.74
2885 3008 5.648092 GGCCAAGACAATATTTGTACTCTGT 59.352 40.000 0.00 0.00 45.52 3.41
2886 3009 5.882557 AGGCCAAGACAATATTTGTACTCTG 59.117 40.000 5.01 0.00 45.52 3.35
2887 3010 6.067217 AGGCCAAGACAATATTTGTACTCT 57.933 37.500 5.01 0.00 45.52 3.24
2888 3011 6.759497 AAGGCCAAGACAATATTTGTACTC 57.241 37.500 5.01 0.00 45.52 2.59
2889 3012 6.719370 TCAAAGGCCAAGACAATATTTGTACT 59.281 34.615 5.01 0.00 45.52 2.73
2890 3013 6.919721 TCAAAGGCCAAGACAATATTTGTAC 58.080 36.000 5.01 0.00 45.52 2.90
2891 3014 7.395772 TCATCAAAGGCCAAGACAATATTTGTA 59.604 33.333 5.01 0.00 45.52 2.41
2893 3016 6.632909 TCATCAAAGGCCAAGACAATATTTG 58.367 36.000 5.01 3.56 0.00 2.32
2894 3017 6.438425 ACTCATCAAAGGCCAAGACAATATTT 59.562 34.615 5.01 0.00 0.00 1.40
2895 3018 5.954150 ACTCATCAAAGGCCAAGACAATATT 59.046 36.000 5.01 0.00 0.00 1.28
2896 3019 5.513233 ACTCATCAAAGGCCAAGACAATAT 58.487 37.500 5.01 0.00 0.00 1.28
2897 3020 4.922206 ACTCATCAAAGGCCAAGACAATA 58.078 39.130 5.01 0.00 0.00 1.90
2898 3021 3.771216 ACTCATCAAAGGCCAAGACAAT 58.229 40.909 5.01 0.00 0.00 2.71
2899 3022 3.228188 ACTCATCAAAGGCCAAGACAA 57.772 42.857 5.01 0.00 0.00 3.18
2900 3023 2.957402 ACTCATCAAAGGCCAAGACA 57.043 45.000 5.01 0.00 0.00 3.41
2901 3024 4.207891 TCTACTCATCAAAGGCCAAGAC 57.792 45.455 5.01 0.00 0.00 3.01
2902 3025 4.323792 CCTTCTACTCATCAAAGGCCAAGA 60.324 45.833 5.01 0.00 32.50 3.02
2903 3026 3.944015 CCTTCTACTCATCAAAGGCCAAG 59.056 47.826 5.01 0.00 32.50 3.61
2904 3027 3.587061 TCCTTCTACTCATCAAAGGCCAA 59.413 43.478 5.01 0.00 38.52 4.52
2905 3028 3.181329 TCCTTCTACTCATCAAAGGCCA 58.819 45.455 5.01 0.00 38.52 5.36
2906 3029 3.452627 TCTCCTTCTACTCATCAAAGGCC 59.547 47.826 0.00 0.00 38.52 5.19
2907 3030 4.744795 TCTCCTTCTACTCATCAAAGGC 57.255 45.455 0.00 0.00 38.52 4.35
2908 3031 5.423610 TCCTTCTCCTTCTACTCATCAAAGG 59.576 44.000 0.00 0.00 39.73 3.11
2909 3032 6.337356 GTCCTTCTCCTTCTACTCATCAAAG 58.663 44.000 0.00 0.00 0.00 2.77
2910 3033 5.187967 GGTCCTTCTCCTTCTACTCATCAAA 59.812 44.000 0.00 0.00 0.00 2.69
2911 3034 4.712337 GGTCCTTCTCCTTCTACTCATCAA 59.288 45.833 0.00 0.00 0.00 2.57
2912 3035 4.282496 GGTCCTTCTCCTTCTACTCATCA 58.718 47.826 0.00 0.00 0.00 3.07
2913 3036 3.639561 GGGTCCTTCTCCTTCTACTCATC 59.360 52.174 0.00 0.00 0.00 2.92
2914 3037 3.631346 GGGGTCCTTCTCCTTCTACTCAT 60.631 52.174 0.00 0.00 32.92 2.90
2915 3038 2.292323 GGGGTCCTTCTCCTTCTACTCA 60.292 54.545 0.00 0.00 32.92 3.41
2916 3039 2.292323 TGGGGTCCTTCTCCTTCTACTC 60.292 54.545 0.00 0.00 37.63 2.59
2917 3040 1.722851 TGGGGTCCTTCTCCTTCTACT 59.277 52.381 0.00 0.00 37.63 2.57
2918 3041 2.249309 TGGGGTCCTTCTCCTTCTAC 57.751 55.000 0.00 0.00 37.63 2.59
2919 3042 2.562214 CCTTGGGGTCCTTCTCCTTCTA 60.562 54.545 0.00 0.00 37.63 2.10
2920 3043 1.662686 CTTGGGGTCCTTCTCCTTCT 58.337 55.000 0.00 0.00 37.63 2.85
2921 3044 0.621082 CCTTGGGGTCCTTCTCCTTC 59.379 60.000 0.00 0.00 37.63 3.46
2922 3045 0.846870 CCCTTGGGGTCCTTCTCCTT 60.847 60.000 0.00 0.00 38.25 3.36
2923 3046 1.229984 CCCTTGGGGTCCTTCTCCT 60.230 63.158 0.00 0.00 38.25 3.69
2924 3047 3.416351 CCCTTGGGGTCCTTCTCC 58.584 66.667 0.00 0.00 38.25 3.71
2946 3069 3.368531 CGAACCCAGACCTTCTCTAAAGG 60.369 52.174 2.29 2.29 43.05 3.11
2947 3070 3.851098 CGAACCCAGACCTTCTCTAAAG 58.149 50.000 0.00 0.00 0.00 1.85
2948 3071 2.028385 GCGAACCCAGACCTTCTCTAAA 60.028 50.000 0.00 0.00 0.00 1.85
2949 3072 1.549170 GCGAACCCAGACCTTCTCTAA 59.451 52.381 0.00 0.00 0.00 2.10
2950 3073 1.183549 GCGAACCCAGACCTTCTCTA 58.816 55.000 0.00 0.00 0.00 2.43
2951 3074 0.543174 AGCGAACCCAGACCTTCTCT 60.543 55.000 0.00 0.00 0.00 3.10
2952 3075 0.321996 AAGCGAACCCAGACCTTCTC 59.678 55.000 0.00 0.00 0.00 2.87
2953 3076 0.321996 GAAGCGAACCCAGACCTTCT 59.678 55.000 0.00 0.00 31.60 2.85
2954 3077 0.321996 AGAAGCGAACCCAGACCTTC 59.678 55.000 0.00 0.00 33.80 3.46
2955 3078 0.321996 GAGAAGCGAACCCAGACCTT 59.678 55.000 0.00 0.00 0.00 3.50
2956 3079 0.543174 AGAGAAGCGAACCCAGACCT 60.543 55.000 0.00 0.00 0.00 3.85
2957 3080 0.390472 CAGAGAAGCGAACCCAGACC 60.390 60.000 0.00 0.00 0.00 3.85
2958 3081 0.318762 ACAGAGAAGCGAACCCAGAC 59.681 55.000 0.00 0.00 0.00 3.51
2959 3082 1.048601 AACAGAGAAGCGAACCCAGA 58.951 50.000 0.00 0.00 0.00 3.86
2960 3083 1.151668 CAACAGAGAAGCGAACCCAG 58.848 55.000 0.00 0.00 0.00 4.45
2961 3084 0.884704 GCAACAGAGAAGCGAACCCA 60.885 55.000 0.00 0.00 0.00 4.51
2962 3085 0.884704 TGCAACAGAGAAGCGAACCC 60.885 55.000 0.00 0.00 0.00 4.11
2963 3086 0.235926 GTGCAACAGAGAAGCGAACC 59.764 55.000 0.00 0.00 36.32 3.62
2964 3087 0.235926 GGTGCAACAGAGAAGCGAAC 59.764 55.000 0.00 0.00 39.98 3.95
2965 3088 0.179059 TGGTGCAACAGAGAAGCGAA 60.179 50.000 0.00 0.00 39.98 4.70
2966 3089 0.035317 ATGGTGCAACAGAGAAGCGA 59.965 50.000 11.62 0.00 39.98 4.93
2967 3090 0.167470 CATGGTGCAACAGAGAAGCG 59.833 55.000 11.62 0.00 39.98 4.68
2968 3091 0.109412 GCATGGTGCAACAGAGAAGC 60.109 55.000 11.62 5.36 44.26 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.