AutoCloner

Multiple sequence alignment - TraesCS5B01G099600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5B01G099600	chr5B	100.000	3298	0	0	1	3298	132587155	132590452	0.000000e+00	6091.0
1	TraesCS5B01G099600	chr5B	79.299	314	41	14	2840	3135	244641336	244641029	7.220000e-47	198.0
2	TraesCS5B01G099600	chr5B	78.997	319	39	22	2839	3134	194126958	194126645	3.360000e-45	193.0
3	TraesCS5B01G099600	chr5B	82.979	94	11	4	2839	2928	38227434	38227342	2.730000e-11	80.5
4	TraesCS5B01G099600	chr5B	97.619	42	1	0	1931	1972	132589016	132589057	4.570000e-09	73.1
5	TraesCS5B01G099600	chr5B	97.619	42	1	0	1862	1903	132589085	132589126	4.570000e-09	73.1
6	TraesCS5B01G099600	chr5A	92.375	3331	202	29	1	3298	129748453	129751764	0.000000e+00	4697.0
7	TraesCS5B01G099600	chr5A	94.318	352	15	5	2840	3188	129757647	129757996	4.840000e-148	534.0
8	TraesCS5B01G099600	chr5A	94.872	117	5	1	3182	3298	129800902	129801017	7.270000e-42	182.0
9	TraesCS5B01G099600	chr5A	95.238	42	2	0	1862	1903	129750398	129750439	2.120000e-07	67.6
10	TraesCS5B01G099600	chr5D	93.557	2778	131	15	1	2731	119658139	119660915	0.000000e+00	4095.0
11	TraesCS5B01G099600	chr6D	86.499	2111	239	26	690	2779	1540241	1538156	0.000000e+00	2278.0
12	TraesCS5B01G099600	chr6D	84.978	1804	196	44	625	2398	8140100	8141858	0.000000e+00	1760.0
13	TraesCS5B01G099600	chr6D	88.929	280	28	2	2235	2513	3618463	3618186	3.150000e-90	342.0
14	TraesCS5B01G099600	chr6D	79.286	420	59	13	564	957	438384	438801	5.420000e-68	268.0
15	TraesCS5B01G099600	chr6D	80.345	290	34	15	2840	3109	89261555	89261269	7.220000e-47	198.0
16	TraesCS5B01G099600	chr6D	100.000	33	0	0	1871	1903	8141408	8141440	9.880000e-06	62.1
17	TraesCS5B01G099600	chr6B	84.860	2107	266	31	690	2779	5715672	5713602	0.000000e+00	2074.0
18	TraesCS5B01G099600	chr6B	84.598	1805	208	38	625	2403	15105596	15107356	0.000000e+00	1729.0
19	TraesCS5B01G099600	chr6B	75.779	1284	218	56	324	1575	2126088	2127310	2.220000e-156	562.0
20	TraesCS5B01G099600	chr6B	79.934	304	41	18	2840	3135	171471679	171471388	4.310000e-49	206.0
21	TraesCS5B01G099600	chr6A	84.539	1811	206	42	625	2403	8608597	8610365	0.000000e+00	1725.0
22	TraesCS5B01G099600	chr6A	83.896	1838	203	53	625	2403	8387490	8389293	0.000000e+00	1668.0
23	TraesCS5B01G099600	chr6A	77.288	295	53	13	2840	3127	107561973	107561686	9.470000e-36	161.0
24	TraesCS5B01G099600	chr6A	74.763	317	53	22	2839	3135	317354876	317355185	2.080000e-22	117.0
25	TraesCS5B01G099600	chr6A	97.368	38	1	0	1866	1903	8388823	8388860	7.640000e-07	65.8
26	TraesCS5B01G099600	chr6A	100.000	33	0	0	1871	1903	8609907	8609939	9.880000e-06	62.1
27	TraesCS5B01G099600	chr7D	84.989	1379	155	30	658	2012	558888744	558887394	0.000000e+00	1352.0
28	TraesCS5B01G099600	chr7D	89.291	719	76	1	2058	2776	558848876	558848159	0.000000e+00	900.0
29	TraesCS5B01G099600	chr7B	87.041	463	49	11	2840	3298	390615815	390616270	2.270000e-141	512.0
30	TraesCS5B01G099600	chr2B	82.083	480	60	15	2840	3298	579596014	579595540	1.440000e-103	387.0
31	TraesCS5B01G099600	chr2B	89.888	89	8	1	2840	2927	367116413	367116501	2.690000e-21	113.0
32	TraesCS5B01G099600	chr7A	78.557	499	72	22	972	1461	8381133	8381605	2.490000e-76	296.0
33	TraesCS5B01G099600	chr1B	77.116	319	43	17	2840	3135	685080089	685080400	1.230000e-34	158.0
34	TraesCS5B01G099600	chr1A	76.875	320	43	17	2840	3135	590751076	590751388	5.700000e-33	152.0
35	TraesCS5B01G099600	chr1D	75.472	318	51	21	2840	3135	130847898	130847586	2.670000e-26	130.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5B01G099600	chr5B	132587155	132590452	3297	False	2079.066667	6091	98.412667	1	3298	3	chr5B.!!$F1	3297
1	TraesCS5B01G099600	chr5A	129748453	129751764	3311	False	2382.300000	4697	93.806500	1	3298	2	chr5A.!!$F3	3297
2	TraesCS5B01G099600	chr5D	119658139	119660915	2776	False	4095.000000	4095	93.557000	1	2731	1	chr5D.!!$F1	2730
3	TraesCS5B01G099600	chr6D	1538156	1540241	2085	True	2278.000000	2278	86.499000	690	2779	1	chr6D.!!$R1	2089
4	TraesCS5B01G099600	chr6D	8140100	8141858	1758	False	911.050000	1760	92.489000	625	2398	2	chr6D.!!$F2	1773
5	TraesCS5B01G099600	chr6B	5713602	5715672	2070	True	2074.000000	2074	84.860000	690	2779	1	chr6B.!!$R1	2089
6	TraesCS5B01G099600	chr6B	15105596	15107356	1760	False	1729.000000	1729	84.598000	625	2403	1	chr6B.!!$F2	1778
7	TraesCS5B01G099600	chr6B	2126088	2127310	1222	False	562.000000	562	75.779000	324	1575	1	chr6B.!!$F1	1251
8	TraesCS5B01G099600	chr6A	8608597	8610365	1768	False	893.550000	1725	92.269500	625	2403	2	chr6A.!!$F3	1778
9	TraesCS5B01G099600	chr6A	8387490	8389293	1803	False	866.900000	1668	90.632000	625	2403	2	chr6A.!!$F2	1778
10	TraesCS5B01G099600	chr7D	558887394	558888744	1350	True	1352.000000	1352	84.989000	658	2012	1	chr7D.!!$R2	1354
11	TraesCS5B01G099600	chr7D	558848159	558848876	717	True	900.000000	900	89.291000	2058	2776	1	chr7D.!!$R1	718

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
494	495	0.179076	AGGACATTCGCGATGCATCA	60.179	50.0	25.7	7.21	39.47	3.07	F
502	503	0.302890	CGCGATGCATCAAGGAACTC	59.697	55.0	25.7	0.00	38.49	3.01	F
1066	1111	0.324368	GGGTTTCCCTGATCCCCAAC	60.324	60.0	0.0	0.00	41.34	3.77	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1422	1506	0.110678	AGAGAGTGTCAGGGTCGACA	59.889	55.000	18.91	0.0	43.54	4.35	R
1921	2031	3.942748	GACCTATCGTGTGAGAGAGAAGT	59.057	47.826	0.00	0.0	35.40	3.01	R
2664	2797	1.059098	AGGAGATGAGCCACACACAA	58.941	50.000	0.00	0.0	0.00	3.33	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
133	134	4.150897	TGACAAACTTTAGTGCTCAGGT	57.849	40.909	0.00	0.00	0.00	4.00
134	135	4.523083	TGACAAACTTTAGTGCTCAGGTT	58.477	39.130	0.00	0.00	0.00	3.50
173	174	4.671831	ACCACAATACAATGATGTCCCAA	58.328	39.130	0.00	0.00	41.05	4.12
238	239	1.371558	GGGTCGCTTCCTTGTGAGT	59.628	57.895	0.00	0.00	0.00	3.41
242	243	2.547218	GGTCGCTTCCTTGTGAGTTACA	60.547	50.000	0.00	0.00	37.56	2.41
296	297	4.066071	TCCCCCATTAAATATCCCAACCT	58.934	43.478	0.00	0.00	0.00	3.50
305	306	3.674358	ATATCCCAACCTGGACCCTAT	57.326	47.619	0.00	0.00	40.96	2.57
462	463	3.901005	ATGGTGGGTGGTGGGGCTA	62.901	63.158	0.00	0.00	0.00	3.93
494	495	0.179076	AGGACATTCGCGATGCATCA	60.179	50.000	25.70	7.21	39.47	3.07
502	503	0.302890	CGCGATGCATCAAGGAACTC	59.697	55.000	25.70	0.00	38.49	3.01
546	547	2.599281	TCGGCGTTGGAGGAGACA	60.599	61.111	6.85	0.00	0.00	3.41
604	606	4.684134	GTGGTGGTGGGCAGCCAT	62.684	66.667	15.19	0.00	38.40	4.40
618	620	1.004044	CAGCCATGACAAAGAGGAGGT	59.996	52.381	0.00	0.00	0.00	3.85
682	684	0.402887	TAGATCGGGATCCACGGCTA	59.597	55.000	15.23	15.21	38.58	3.93
688	690	2.435693	GGATCCACGGCTAGCTGGT	61.436	63.158	26.90	16.25	0.00	4.00
694	696	3.854669	CGGCTAGCTGGTGGAGGG	61.855	72.222	16.30	0.00	0.00	4.30
695	697	2.365635	GGCTAGCTGGTGGAGGGA	60.366	66.667	15.72	0.00	0.00	4.20
696	698	1.768077	GGCTAGCTGGTGGAGGGAT	60.768	63.158	15.72	0.00	0.00	3.85
769	787	5.523438	TGGCGGAAGTCTTTTTGTAAAAT	57.477	34.783	0.00	0.00	36.07	1.82
884	915	5.374921	TGGTTCGATTTGGTTTGGTAGTAA	58.625	37.500	0.00	0.00	0.00	2.24
918	949	7.808381	CGTTTCCTTGTGATGTACGATAGATAT	59.192	37.037	0.00	0.00	41.38	1.63
936	969	5.972935	AGATATGTGTCCATTCACGTGTTA	58.027	37.500	16.51	5.48	40.74	2.41
1022	1057	4.016105	TCCCATCTTTTCCTCTCCTCTACT	60.016	45.833	0.00	0.00	0.00	2.57
1024	1059	4.714308	CCATCTTTTCCTCTCCTCTACTGT	59.286	45.833	0.00	0.00	0.00	3.55
1025	1060	5.163457	CCATCTTTTCCTCTCCTCTACTGTC	60.163	48.000	0.00	0.00	0.00	3.51
1026	1061	4.011023	TCTTTTCCTCTCCTCTACTGTCG	58.989	47.826	0.00	0.00	0.00	4.35
1027	1062	3.436577	TTTCCTCTCCTCTACTGTCGT	57.563	47.619	0.00	0.00	0.00	4.34
1066	1111	0.324368	GGGTTTCCCTGATCCCCAAC	60.324	60.000	0.00	0.00	41.34	3.77
1199	1274	1.807165	CAGTCACCATGGAGTCGCG	60.807	63.158	21.47	0.00	0.00	5.87
1422	1506	2.947652	CTGGGACGCAGAATTCATCAAT	59.052	45.455	14.07	0.00	0.00	2.57
1528	1612	0.779997	ATGTTCCCCTTCTGGCACTT	59.220	50.000	0.00	0.00	0.00	3.16
1545	1629	4.444876	GGCACTTGAATCTAGATTGGGCTA	60.445	45.833	22.61	4.88	0.00	3.93
1546	1630	4.513318	GCACTTGAATCTAGATTGGGCTAC	59.487	45.833	22.61	7.58	0.00	3.58
1641	1725	9.930693	GATTCGATTGGACTAGATTAGGTTTAT	57.069	33.333	0.00	0.00	0.00	1.40
1745	1830	8.549548	CATCTTGTGATCTGATATGTTTCACTC	58.450	37.037	7.95	0.00	38.00	3.51
1762	1847	9.883142	TGTTTCACTCATATGTGTATGTCATTA	57.117	29.630	9.95	0.00	39.01	1.90
1781	1866	7.654520	TGTCATTATTATGCGTAACCTAGGAAC	59.345	37.037	17.98	12.16	0.00	3.62
1804	1889	7.865706	ACCTTTATTATGATCAGTGTGAACC	57.134	36.000	0.09	0.00	0.00	3.62
1807	1892	9.784531	CCTTTATTATGATCAGTGTGAACCTAT	57.215	33.333	0.09	0.00	0.00	2.57
1901	2010	9.213799	ACTTCATGTGTTGTTTTGTGTTTTATT	57.786	25.926	0.00	0.00	0.00	1.40
2503	2636	7.547019	TCATCTAAAGCACTCATGTCAAGTAAG	59.453	37.037	0.00	0.00	0.00	2.34
2745	2878	3.308688	CCCAAGGGACATGATATGATCCC	60.309	52.174	8.46	8.46	44.26	3.85
2751	2884	3.776969	GGACATGATATGATCCCAGGCTA	59.223	47.826	0.00	0.00	0.00	3.93
2757	2890	5.103687	TGATATGATCCCAGGCTAAGGAAT	58.896	41.667	9.31	3.07	35.30	3.01
2789	2922	5.068987	TCCAAAAGAATCTCCACCAACTTTG	59.931	40.000	0.00	0.00	0.00	2.77
2790	2923	4.590850	AAAGAATCTCCACCAACTTTGC	57.409	40.909	0.00	0.00	0.00	3.68
2803	2936	3.568538	CAACTTTGCGATCAAGAAAGGG	58.431	45.455	11.00	2.39	33.12	3.95
2814	2947	4.021102	TCAAGAAAGGGTCACCAATCTC	57.979	45.455	0.00	0.00	40.13	2.75
2815	2948	3.394274	TCAAGAAAGGGTCACCAATCTCA	59.606	43.478	0.00	0.00	40.13	3.27
2842	2975	3.220110	CTCTTAGCGGTGACCCTATGTA	58.780	50.000	0.00	0.00	0.00	2.29
2855	2988	5.018374	ACCCTATGTAACACCCCAAAAAT	57.982	39.130	0.00	0.00	0.00	1.82
2869	3003	8.053355	ACACCCCAAAAATTTAACCATGTTTTA	58.947	29.630	0.00	0.00	0.00	1.52
3292	3435	3.329520	GGGCCCTTTTAGACCCAAATTTT	59.670	43.478	17.04	0.00	42.33	1.82
3293	3436	4.532916	GGGCCCTTTTAGACCCAAATTTTA	59.467	41.667	17.04	0.00	42.33	1.52
3296	3439	7.172342	GGCCCTTTTAGACCCAAATTTTATTT	58.828	34.615	0.00	0.00	0.00	1.40
3297	3440	7.335924	GGCCCTTTTAGACCCAAATTTTATTTC	59.664	37.037	0.00	0.00	0.00	2.17

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
133	134	4.651503	TGTGGTTTCCTAATTTGGCTTCAA	59.348	37.500	0.45	0.00	0.00	2.69
134	135	4.219115	TGTGGTTTCCTAATTTGGCTTCA	58.781	39.130	0.45	0.00	0.00	3.02
238	239	4.404715	GCCTGGTAGGATAGAGTGTTGTAA	59.595	45.833	0.00	0.00	37.67	2.41
242	243	2.032620	CGCCTGGTAGGATAGAGTGTT	58.967	52.381	0.00	0.00	37.67	3.32
272	273	4.107311	GGTTGGGATATTTAATGGGGGAGA	59.893	45.833	0.00	0.00	0.00	3.71
296	297	1.218844	GGTTGGGCTTATAGGGTCCA	58.781	55.000	0.00	0.00	36.60	4.02
305	306	1.447099	TGTAAGGTGGGTTGGGCTTA	58.553	50.000	0.00	0.00	0.00	3.09
462	463	2.334006	ATGTCCTCCTCTGTTCCAGT	57.666	50.000	0.00	0.00	32.61	4.00
546	547	0.944999	TCTCCTCTATGCCCTTCCCT	59.055	55.000	0.00	0.00	0.00	4.20
599	601	1.366319	ACCTCCTCTTTGTCATGGCT	58.634	50.000	0.00	0.00	0.00	4.75
604	606	3.007940	CCACACATACCTCCTCTTTGTCA	59.992	47.826	0.00	0.00	0.00	3.58
618	620	2.353189	CCCCCAACGCCACACATA	59.647	61.111	0.00	0.00	0.00	2.29
682	684	2.693864	CCCATCCCTCCACCAGCT	60.694	66.667	0.00	0.00	0.00	4.24
688	690	2.763215	GTGCAACCCATCCCTCCA	59.237	61.111	0.00	0.00	0.00	3.86
694	696	3.995506	CTCCCCCGTGCAACCCATC	62.996	68.421	0.00	0.00	0.00	3.51
695	697	4.047125	CTCCCCCGTGCAACCCAT	62.047	66.667	0.00	0.00	0.00	4.00
743	761	3.222603	ACAAAAAGACTTCCGCCAATCT	58.777	40.909	0.00	0.00	0.00	2.40
746	764	4.985538	TTTACAAAAAGACTTCCGCCAA	57.014	36.364	0.00	0.00	0.00	4.52
769	787	5.144832	TCTATATGTAGCTAGTGGTGGCAA	58.855	41.667	0.00	0.00	30.99	4.52
884	915	2.582052	TCACAAGGAAACGAAGCCAAT	58.418	42.857	0.00	0.00	0.00	3.16
918	949	2.485903	GGTAACACGTGAATGGACACA	58.514	47.619	25.01	0.00	40.34	3.72
936	969	4.587262	GGAATTTATTTATTGAGGCGGGGT	59.413	41.667	0.00	0.00	0.00	4.95
992	1027	5.339530	GGAGAGGAAAAGATGGGAGATTTGA	60.340	44.000	0.00	0.00	0.00	2.69
1056	1101	0.548031	GGCAGATGAGTTGGGGATCA	59.452	55.000	0.00	0.00	0.00	2.92
1066	1111	1.980784	CTGAGGTGGGGGCAGATGAG	61.981	65.000	0.00	0.00	0.00	2.90
1199	1274	0.886490	GATCATGTGGCGGATGGTCC	60.886	60.000	0.00	0.00	0.00	4.46
1383	1467	0.324738	AGATCTTGAGGTCCTCGGCA	60.325	55.000	14.34	0.26	32.35	5.69
1422	1506	0.110678	AGAGAGTGTCAGGGTCGACA	59.889	55.000	18.91	0.00	43.54	4.35
1545	1629	6.930068	ATATAAATAGTAGCAAGACGGGGT	57.070	37.500	0.00	0.00	0.00	4.95
1546	1630	8.746530	TCTAATATAAATAGTAGCAAGACGGGG	58.253	37.037	0.64	0.00	32.59	5.73
1762	1847	5.625568	AAGGTTCCTAGGTTACGCATAAT	57.374	39.130	9.08	0.00	0.00	1.28
1781	1866	9.784531	ATAGGTTCACACTGATCATAATAAAGG	57.215	33.333	0.00	0.00	0.00	3.11
1921	2031	3.942748	GACCTATCGTGTGAGAGAGAAGT	59.057	47.826	0.00	0.00	35.40	3.01
2503	2636	4.521146	TCAGATTGGCTGGAGAGAAAATC	58.479	43.478	0.00	0.00	44.98	2.17
2586	2719	6.107343	TCAAATGGTTTATGCAACATCATGG	58.893	36.000	0.00	0.00	37.07	3.66
2648	2781	5.122239	CACACACAATACCTTGTACCATCAG	59.878	44.000	0.00	0.00	43.76	2.90
2664	2797	1.059098	AGGAGATGAGCCACACACAA	58.941	50.000	0.00	0.00	0.00	3.33
2745	2878	3.556004	GGAAGATCGGATTCCTTAGCCTG	60.556	52.174	0.30	0.00	42.52	4.85
2751	2884	5.179452	TCTTTTGGAAGATCGGATTCCTT	57.821	39.130	12.13	2.45	45.45	3.36
2757	2890	4.225042	TGGAGATTCTTTTGGAAGATCGGA	59.775	41.667	0.00	0.00	41.35	4.55
2789	2922	1.087501	GGTGACCCTTTCTTGATCGC	58.912	55.000	0.00	0.00	0.00	4.58
2790	2923	2.472695	TGGTGACCCTTTCTTGATCG	57.527	50.000	0.00	0.00	0.00	3.69
2803	2936	2.503356	AGAGGGTGATGAGATTGGTGAC	59.497	50.000	0.00	0.00	0.00	3.67
2842	2975	6.007485	ACATGGTTAAATTTTTGGGGTGTT	57.993	33.333	0.00	0.00	0.00	3.32
3084	3220	6.543831	AGTGCAACAGAAACATTCTAGAGTTT	59.456	34.615	9.25	9.25	41.43	2.66
3087	3223	7.658179	TTAGTGCAACAGAAACATTCTAGAG	57.342	36.000	0.00	0.00	41.43	2.43
3088	3224	8.342634	GTTTTAGTGCAACAGAAACATTCTAGA	58.657	33.333	0.00	0.00	40.92	2.43
3089	3225	8.345565	AGTTTTAGTGCAACAGAAACATTCTAG	58.654	33.333	14.61	0.00	42.51	2.43
3129	3266	9.619316	ACAAGAAAATTTTAAACACCAAAAAGC	57.381	25.926	2.75	0.00	0.00	3.51
3247	3384	8.286800	GCCCCAGTTTAATAAAACAAAATGAAC	58.713	33.333	4.04	0.00	46.18	3.18
3250	3387	6.150307	GGGCCCCAGTTTAATAAAACAAAATG	59.850	38.462	12.23	0.00	46.18	2.32
3251	3388	6.044989	AGGGCCCCAGTTTAATAAAACAAAAT	59.955	34.615	21.43	0.00	46.18	1.82
3256	3393	5.492855	AAAGGGCCCCAGTTTAATAAAAC	57.507	39.130	21.43	0.00	44.47	2.43
3261	3398	4.350245	GTCTAAAAGGGCCCCAGTTTAAT	58.650	43.478	21.43	1.04	0.00	1.40
3263	3400	2.042026	GGTCTAAAAGGGCCCCAGTTTA	59.958	50.000	21.43	18.94	0.00	2.01
3264	3401	1.203137	GGTCTAAAAGGGCCCCAGTTT	60.203	52.381	21.43	18.82	0.00	2.66
3265	3402	0.408309	GGTCTAAAAGGGCCCCAGTT	59.592	55.000	21.43	13.03	0.00	3.16
3266	3403	1.506907	GGGTCTAAAAGGGCCCCAGT	61.507	60.000	21.43	5.96	35.32	4.00

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.