Multiple sequence alignment - TraesCS5B01G098600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G098600 chr5B 100.000 8693 0 0 1 8693 130722362 130731054 0.000000e+00 16054.0
1 TraesCS5B01G098600 chr5B 78.968 252 36 10 8459 8693 655611241 655611492 1.170000e-33 156.0
2 TraesCS5B01G098600 chr5D 96.319 6656 149 38 1585 8192 118494347 118500954 0.000000e+00 10846.0
3 TraesCS5B01G098600 chr5D 93.082 1301 46 9 271 1571 118492922 118494178 0.000000e+00 1864.0
4 TraesCS5B01G098600 chr5D 89.500 200 18 2 8217 8416 118500949 118501145 5.210000e-62 250.0
5 TraesCS5B01G098600 chr5A 97.084 2949 51 12 1585 4519 127980276 127983203 0.000000e+00 4937.0
6 TraesCS5B01G098600 chr5A 95.050 1313 45 9 260 1571 127978817 127980110 0.000000e+00 2047.0
7 TraesCS5B01G098600 chr5A 93.039 1293 50 16 7102 8370 127985975 127987251 0.000000e+00 1853.0
8 TraesCS5B01G098600 chr5A 92.764 1147 53 13 5442 6587 127984379 127985496 0.000000e+00 1631.0
9 TraesCS5B01G098600 chr5A 93.939 891 30 13 4519 5395 127983501 127984381 0.000000e+00 1325.0
10 TraesCS5B01G098600 chr5A 92.343 431 14 4 6621 7049 127985562 127985975 5.810000e-166 595.0
11 TraesCS5B01G098600 chr5A 78.035 173 30 7 8522 8693 342626430 342626265 1.540000e-17 102.0
12 TraesCS5B01G098600 chr6B 89.785 186 18 1 1 185 596908716 596908901 4.060000e-58 237.0
13 TraesCS5B01G098600 chr6B 80.085 236 25 14 8459 8682 203933101 203933326 1.170000e-33 156.0
14 TraesCS5B01G098600 chr1B 88.770 187 20 1 1 186 19883954 19883768 2.440000e-55 228.0
15 TraesCS5B01G098600 chr1B 89.071 183 20 0 1 183 19939608 19939426 2.440000e-55 228.0
16 TraesCS5B01G098600 chr1B 88.235 187 21 1 1 186 19611938 19611752 1.140000e-53 222.0
17 TraesCS5B01G098600 chr1B 88.235 187 21 1 1 186 19769236 19769050 1.140000e-53 222.0
18 TraesCS5B01G098600 chr1B 87.701 187 22 1 1 186 19679892 19679706 5.280000e-52 217.0
19 TraesCS5B01G098600 chr1B 87.701 187 22 1 1 186 19711890 19711704 5.280000e-52 217.0
20 TraesCS5B01G098600 chr1B 87.701 187 22 1 1 186 19831648 19831462 5.280000e-52 217.0
21 TraesCS5B01G098600 chr1B 84.574 188 29 0 1 188 651710115 651709928 4.140000e-43 187.0
22 TraesCS5B01G098600 chr1B 80.769 104 19 1 8590 8693 31963233 31963335 7.230000e-11 80.5
23 TraesCS5B01G098600 chr7B 81.116 233 28 8 8459 8675 301591330 301591098 1.160000e-38 172.0
24 TraesCS5B01G098600 chr2A 96.970 99 3 0 2590 2688 673006204 673006106 5.400000e-37 167.0
25 TraesCS5B01G098600 chr2A 78.673 211 28 9 8480 8673 746917374 746917584 3.300000e-24 124.0
26 TraesCS5B01G098600 chr6A 78.534 191 32 8 8498 8687 414870165 414870347 5.510000e-22 117.0
27 TraesCS5B01G098600 chr7D 75.701 214 42 8 8476 8687 550611019 550610814 2.000000e-16 99.0
28 TraesCS5B01G098600 chr2D 75.455 220 44 9 8476 8693 127521542 127521331 2.000000e-16 99.0
29 TraesCS5B01G098600 chr1A 82.692 104 17 1 8590 8693 148103689 148103587 3.340000e-14 91.6
30 TraesCS5B01G098600 chr4D 74.766 214 44 8 8476 8687 363104645 363104850 4.320000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G098600 chr5B 130722362 130731054 8692 False 16054.000000 16054 100.0000 1 8693 1 chr5B.!!$F1 8692
1 TraesCS5B01G098600 chr5D 118492922 118501145 8223 False 4320.000000 10846 92.9670 271 8416 3 chr5D.!!$F1 8145
2 TraesCS5B01G098600 chr5A 127978817 127987251 8434 False 2064.666667 4937 94.0365 260 8370 6 chr5A.!!$F1 8110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
121 122 0.095417 GAGCGTCGTTTGCTTCCATC 59.905 55.000 0.00 0.00 44.18 3.51 F
1227 1233 0.031314 CGACCTCCATCGACTCCATG 59.969 60.000 0.00 0.00 45.13 3.66 F
1835 1996 0.940126 CTTAGGCGCCTATGCAACAG 59.060 55.000 35.60 24.24 37.32 3.16 F
2182 2343 0.990374 AGCTCCCTGATCAGTTTGCT 59.010 50.000 21.11 20.79 0.00 3.91 F
2183 2344 1.353694 AGCTCCCTGATCAGTTTGCTT 59.646 47.619 21.11 8.83 0.00 3.91 F
3737 3913 0.767375 AAAGCAGAGAGGGAAGCACA 59.233 50.000 0.00 0.00 0.00 4.57 F
4731 5206 5.128008 AGGCAGAAAGAGATGTAAGTACTCC 59.872 44.000 0.00 0.00 0.00 3.85 F
5452 5945 0.607489 GGTGCATGCAACTCCACTCT 60.607 55.000 28.48 0.00 0.00 3.24 F
6543 7043 0.032017 ATCCGGTAGCCAAGAGGAGT 60.032 55.000 0.00 0.00 36.89 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1595 1756 1.796459 ACTCAACGCAACATTCGGTAC 59.204 47.619 0.00 0.00 0.00 3.34 R
2618 2794 1.147153 GGCTGAGATGTAGGCACCC 59.853 63.158 0.00 0.00 40.17 4.61 R
3657 3833 0.545309 TAGCCCTCTCCACAGCTTGT 60.545 55.000 0.00 0.00 36.79 3.16 R
3737 3913 2.032620 CAGCCCTCTCATTACGTAGGT 58.967 52.381 0.00 0.00 0.00 3.08 R
4192 4368 7.973944 GCATTAAACGTAGGATCCTGAAATTTT 59.026 33.333 25.28 16.56 0.00 1.82 R
5431 5924 0.467844 AGTGGAGTTGCATGCACCAA 60.468 50.000 25.27 8.23 42.00 3.67 R
5851 6348 0.179215 GGAAGCGTGCAAGATTGTCG 60.179 55.000 8.12 0.00 0.00 4.35 R
7172 7718 1.134007 CAGGCTGCCATCCACATTCTA 60.134 52.381 22.65 0.00 0.00 2.10 R
8366 8954 1.332889 TGATGACAGCTGGCGGATCT 61.333 55.000 19.93 0.00 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.899226 GTGCTAAGATAAAACTGAAAACTCATT 57.101 29.630 0.00 0.00 0.00 2.57
35 36 8.697507 AAAACTGAAAACTCATTACAGATCCT 57.302 30.769 0.00 0.00 33.53 3.24
36 37 8.697507 AAACTGAAAACTCATTACAGATCCTT 57.302 30.769 0.00 0.00 33.53 3.36
37 38 7.913674 ACTGAAAACTCATTACAGATCCTTC 57.086 36.000 0.00 0.00 33.53 3.46
38 39 7.684529 ACTGAAAACTCATTACAGATCCTTCT 58.315 34.615 0.00 0.00 33.53 2.85
39 40 7.821846 ACTGAAAACTCATTACAGATCCTTCTC 59.178 37.037 0.00 0.00 33.53 2.87
40 41 7.106239 TGAAAACTCATTACAGATCCTTCTCC 58.894 38.462 0.00 0.00 0.00 3.71
41 42 6.882768 AAACTCATTACAGATCCTTCTCCT 57.117 37.500 0.00 0.00 0.00 3.69
42 43 5.867903 ACTCATTACAGATCCTTCTCCTG 57.132 43.478 0.00 0.00 0.00 3.86
43 44 4.653341 ACTCATTACAGATCCTTCTCCTGG 59.347 45.833 0.00 0.00 32.52 4.45
44 45 4.883759 TCATTACAGATCCTTCTCCTGGA 58.116 43.478 0.00 0.00 38.06 3.86
45 46 5.471424 TCATTACAGATCCTTCTCCTGGAT 58.529 41.667 0.00 0.00 46.05 3.41
48 49 3.904586 GATCCTTCTCCTGGATCGC 57.095 57.895 0.00 0.00 46.88 4.58
49 50 1.043816 GATCCTTCTCCTGGATCGCA 58.956 55.000 0.00 0.00 46.88 5.10
50 51 0.755686 ATCCTTCTCCTGGATCGCAC 59.244 55.000 0.00 0.00 39.96 5.34
51 52 1.227089 CCTTCTCCTGGATCGCACG 60.227 63.158 0.00 0.00 0.00 5.34
52 53 1.227089 CTTCTCCTGGATCGCACGG 60.227 63.158 0.00 0.00 0.00 4.94
53 54 3.371097 TTCTCCTGGATCGCACGGC 62.371 63.158 0.00 0.00 0.00 5.68
54 55 4.147449 CTCCTGGATCGCACGGCA 62.147 66.667 0.00 0.00 0.00 5.69
55 56 4.451150 TCCTGGATCGCACGGCAC 62.451 66.667 0.00 0.00 0.00 5.01
72 73 2.109799 CGCAGGCCTGGGTATGAG 59.890 66.667 35.34 9.15 38.53 2.90
73 74 2.735772 CGCAGGCCTGGGTATGAGT 61.736 63.158 35.34 0.00 38.53 3.41
74 75 1.399744 CGCAGGCCTGGGTATGAGTA 61.400 60.000 35.34 0.00 38.53 2.59
75 76 0.394565 GCAGGCCTGGGTATGAGTAG 59.605 60.000 33.46 4.28 0.00 2.57
76 77 1.051812 CAGGCCTGGGTATGAGTAGG 58.948 60.000 26.14 0.00 0.00 3.18
77 78 0.104934 AGGCCTGGGTATGAGTAGGG 60.105 60.000 3.11 0.00 0.00 3.53
78 79 1.128188 GGCCTGGGTATGAGTAGGGG 61.128 65.000 0.00 0.00 0.00 4.79
79 80 0.400093 GCCTGGGTATGAGTAGGGGT 60.400 60.000 0.00 0.00 0.00 4.95
80 81 1.424638 CCTGGGTATGAGTAGGGGTG 58.575 60.000 0.00 0.00 0.00 4.61
81 82 1.344087 CCTGGGTATGAGTAGGGGTGT 60.344 57.143 0.00 0.00 0.00 4.16
82 83 2.478292 CTGGGTATGAGTAGGGGTGTT 58.522 52.381 0.00 0.00 0.00 3.32
83 84 2.844348 CTGGGTATGAGTAGGGGTGTTT 59.156 50.000 0.00 0.00 0.00 2.83
84 85 4.035112 CTGGGTATGAGTAGGGGTGTTTA 58.965 47.826 0.00 0.00 0.00 2.01
85 86 4.637600 TGGGTATGAGTAGGGGTGTTTAT 58.362 43.478 0.00 0.00 0.00 1.40
86 87 4.657039 TGGGTATGAGTAGGGGTGTTTATC 59.343 45.833 0.00 0.00 0.00 1.75
87 88 4.657039 GGGTATGAGTAGGGGTGTTTATCA 59.343 45.833 0.00 0.00 0.00 2.15
88 89 5.309806 GGGTATGAGTAGGGGTGTTTATCAT 59.690 44.000 0.00 0.00 0.00 2.45
89 90 6.231211 GGTATGAGTAGGGGTGTTTATCATG 58.769 44.000 0.00 0.00 0.00 3.07
90 91 4.150897 TGAGTAGGGGTGTTTATCATGC 57.849 45.455 0.00 0.00 0.00 4.06
91 92 3.780294 TGAGTAGGGGTGTTTATCATGCT 59.220 43.478 0.00 0.00 0.00 3.79
92 93 4.130118 GAGTAGGGGTGTTTATCATGCTG 58.870 47.826 0.00 0.00 0.00 4.41
93 94 3.780294 AGTAGGGGTGTTTATCATGCTGA 59.220 43.478 0.00 0.00 0.00 4.26
94 95 3.959495 AGGGGTGTTTATCATGCTGAT 57.041 42.857 4.45 4.45 40.72 2.90
95 96 5.606749 AGTAGGGGTGTTTATCATGCTGATA 59.393 40.000 0.00 2.81 38.26 2.15
96 97 5.589367 AGGGGTGTTTATCATGCTGATAT 57.411 39.130 6.68 0.00 38.94 1.63
97 98 5.564550 AGGGGTGTTTATCATGCTGATATC 58.435 41.667 0.00 0.00 38.94 1.63
98 99 5.311649 AGGGGTGTTTATCATGCTGATATCT 59.688 40.000 3.98 0.00 38.94 1.98
99 100 6.006449 GGGGTGTTTATCATGCTGATATCTT 58.994 40.000 3.98 0.00 38.94 2.40
100 101 6.150140 GGGGTGTTTATCATGCTGATATCTTC 59.850 42.308 3.98 0.00 38.94 2.87
101 102 6.128445 GGGTGTTTATCATGCTGATATCTTCG 60.128 42.308 3.98 0.00 38.94 3.79
102 103 6.128445 GGTGTTTATCATGCTGATATCTTCGG 60.128 42.308 3.98 0.00 38.94 4.30
103 104 6.646653 GTGTTTATCATGCTGATATCTTCGGA 59.353 38.462 3.98 0.00 38.94 4.55
104 105 6.870439 TGTTTATCATGCTGATATCTTCGGAG 59.130 38.462 3.98 0.00 38.94 4.63
105 106 3.309961 TCATGCTGATATCTTCGGAGC 57.690 47.619 3.98 4.73 31.81 4.70
106 107 1.991264 CATGCTGATATCTTCGGAGCG 59.009 52.381 3.98 0.00 31.81 5.03
107 108 1.032794 TGCTGATATCTTCGGAGCGT 58.967 50.000 3.98 0.00 31.81 5.07
108 109 1.001268 TGCTGATATCTTCGGAGCGTC 60.001 52.381 3.98 0.00 31.81 5.19
109 110 1.957089 CTGATATCTTCGGAGCGTCG 58.043 55.000 3.98 0.00 31.81 5.12
110 111 1.264557 CTGATATCTTCGGAGCGTCGT 59.735 52.381 3.98 0.00 31.81 4.34
111 112 1.674441 TGATATCTTCGGAGCGTCGTT 59.326 47.619 3.98 0.00 0.00 3.85
112 113 2.098607 TGATATCTTCGGAGCGTCGTTT 59.901 45.455 3.98 0.00 0.00 3.60
113 114 1.904144 TATCTTCGGAGCGTCGTTTG 58.096 50.000 0.00 0.00 0.00 2.93
114 115 1.352156 ATCTTCGGAGCGTCGTTTGC 61.352 55.000 0.00 0.00 0.00 3.68
116 117 1.557443 CTTCGGAGCGTCGTTTGCTT 61.557 55.000 0.00 0.00 44.18 3.91
117 118 1.554042 TTCGGAGCGTCGTTTGCTTC 61.554 55.000 0.00 0.00 44.18 3.86
118 119 2.861006 GGAGCGTCGTTTGCTTCC 59.139 61.111 0.00 1.33 44.18 3.46
119 120 1.959226 GGAGCGTCGTTTGCTTCCA 60.959 57.895 0.00 0.00 44.18 3.53
120 121 1.298859 GGAGCGTCGTTTGCTTCCAT 61.299 55.000 0.00 0.00 44.18 3.41
121 122 0.095417 GAGCGTCGTTTGCTTCCATC 59.905 55.000 0.00 0.00 44.18 3.51
122 123 1.134694 GCGTCGTTTGCTTCCATCC 59.865 57.895 0.00 0.00 0.00 3.51
123 124 1.298859 GCGTCGTTTGCTTCCATCCT 61.299 55.000 0.00 0.00 0.00 3.24
124 125 1.156736 CGTCGTTTGCTTCCATCCTT 58.843 50.000 0.00 0.00 0.00 3.36
125 126 1.535462 CGTCGTTTGCTTCCATCCTTT 59.465 47.619 0.00 0.00 0.00 3.11
126 127 2.412847 CGTCGTTTGCTTCCATCCTTTC 60.413 50.000 0.00 0.00 0.00 2.62
127 128 2.814336 GTCGTTTGCTTCCATCCTTTCT 59.186 45.455 0.00 0.00 0.00 2.52
128 129 2.813754 TCGTTTGCTTCCATCCTTTCTG 59.186 45.455 0.00 0.00 0.00 3.02
129 130 2.813754 CGTTTGCTTCCATCCTTTCTGA 59.186 45.455 0.00 0.00 0.00 3.27
130 131 3.441572 CGTTTGCTTCCATCCTTTCTGAT 59.558 43.478 0.00 0.00 0.00 2.90
131 132 4.437930 CGTTTGCTTCCATCCTTTCTGATC 60.438 45.833 0.00 0.00 0.00 2.92
132 133 4.581309 TTGCTTCCATCCTTTCTGATCT 57.419 40.909 0.00 0.00 0.00 2.75
133 134 4.581309 TGCTTCCATCCTTTCTGATCTT 57.419 40.909 0.00 0.00 0.00 2.40
134 135 4.927049 TGCTTCCATCCTTTCTGATCTTT 58.073 39.130 0.00 0.00 0.00 2.52
135 136 5.327732 TGCTTCCATCCTTTCTGATCTTTT 58.672 37.500 0.00 0.00 0.00 2.27
136 137 5.184479 TGCTTCCATCCTTTCTGATCTTTTG 59.816 40.000 0.00 0.00 0.00 2.44
137 138 5.416952 GCTTCCATCCTTTCTGATCTTTTGA 59.583 40.000 0.00 0.00 0.00 2.69
138 139 6.404513 GCTTCCATCCTTTCTGATCTTTTGAG 60.405 42.308 0.00 0.00 0.00 3.02
139 140 4.946157 TCCATCCTTTCTGATCTTTTGAGC 59.054 41.667 0.00 0.00 35.01 4.26
140 141 4.948621 CCATCCTTTCTGATCTTTTGAGCT 59.051 41.667 0.00 0.00 35.56 4.09
141 142 5.418209 CCATCCTTTCTGATCTTTTGAGCTT 59.582 40.000 0.00 0.00 35.56 3.74
142 143 5.954296 TCCTTTCTGATCTTTTGAGCTTG 57.046 39.130 0.00 0.00 35.56 4.01
143 144 5.624159 TCCTTTCTGATCTTTTGAGCTTGA 58.376 37.500 0.00 0.00 35.56 3.02
144 145 6.064060 TCCTTTCTGATCTTTTGAGCTTGAA 58.936 36.000 0.00 0.00 35.56 2.69
145 146 6.547141 TCCTTTCTGATCTTTTGAGCTTGAAA 59.453 34.615 0.00 0.00 36.52 2.69
146 147 6.862090 CCTTTCTGATCTTTTGAGCTTGAAAG 59.138 38.462 13.61 13.61 44.66 2.62
147 148 5.954296 TCTGATCTTTTGAGCTTGAAAGG 57.046 39.130 17.51 8.32 35.56 3.11
148 149 5.380043 TCTGATCTTTTGAGCTTGAAAGGT 58.620 37.500 17.51 13.14 39.89 3.50
149 150 5.240183 TCTGATCTTTTGAGCTTGAAAGGTG 59.760 40.000 17.51 5.48 36.78 4.00
150 151 4.279169 TGATCTTTTGAGCTTGAAAGGTGG 59.721 41.667 17.51 0.45 36.78 4.61
151 152 3.631250 TCTTTTGAGCTTGAAAGGTGGT 58.369 40.909 17.51 0.00 36.78 4.16
152 153 3.381272 TCTTTTGAGCTTGAAAGGTGGTG 59.619 43.478 17.51 0.00 36.78 4.17
153 154 1.032014 TTGAGCTTGAAAGGTGGTGC 58.968 50.000 0.00 0.00 36.78 5.01
154 155 0.183492 TGAGCTTGAAAGGTGGTGCT 59.817 50.000 0.00 0.00 36.78 4.40
155 156 0.595095 GAGCTTGAAAGGTGGTGCTG 59.405 55.000 0.00 0.00 36.78 4.41
156 157 0.106519 AGCTTGAAAGGTGGTGCTGT 60.107 50.000 0.00 0.00 35.05 4.40
157 158 1.142870 AGCTTGAAAGGTGGTGCTGTA 59.857 47.619 0.00 0.00 35.05 2.74
158 159 1.537202 GCTTGAAAGGTGGTGCTGTAG 59.463 52.381 0.00 0.00 0.00 2.74
159 160 1.537202 CTTGAAAGGTGGTGCTGTAGC 59.463 52.381 0.00 0.00 42.50 3.58
160 161 0.250727 TGAAAGGTGGTGCTGTAGCC 60.251 55.000 0.80 0.00 41.18 3.93
161 162 1.298859 GAAAGGTGGTGCTGTAGCCG 61.299 60.000 0.80 0.00 41.18 5.52
162 163 3.901797 AAGGTGGTGCTGTAGCCGC 62.902 63.158 0.80 0.00 41.18 6.53
164 165 4.394712 GTGGTGCTGTAGCCGCCT 62.395 66.667 13.23 0.00 41.18 5.52
165 166 4.393155 TGGTGCTGTAGCCGCCTG 62.393 66.667 13.23 0.00 41.18 4.85
184 185 4.729918 GGTGACCAGCAGGCCAGG 62.730 72.222 5.01 3.41 39.06 4.45
185 186 3.958860 GTGACCAGCAGGCCAGGT 61.959 66.667 5.01 7.28 39.06 4.00
186 187 3.177884 TGACCAGCAGGCCAGGTT 61.178 61.111 5.01 0.00 39.06 3.50
187 188 2.116125 GACCAGCAGGCCAGGTTT 59.884 61.111 5.01 0.00 39.06 3.27
188 189 1.531602 GACCAGCAGGCCAGGTTTT 60.532 57.895 5.01 0.00 39.06 2.43
189 190 1.075301 ACCAGCAGGCCAGGTTTTT 60.075 52.632 5.01 0.00 39.06 1.94
216 217 4.789012 TTTTTGAGAATTAGCAGGCCAG 57.211 40.909 5.01 0.00 0.00 4.85
217 218 2.425143 TTGAGAATTAGCAGGCCAGG 57.575 50.000 5.01 0.00 0.00 4.45
218 219 0.548031 TGAGAATTAGCAGGCCAGGG 59.452 55.000 5.01 0.00 0.00 4.45
219 220 0.548510 GAGAATTAGCAGGCCAGGGT 59.451 55.000 5.01 4.70 0.00 4.34
220 221 0.548510 AGAATTAGCAGGCCAGGGTC 59.451 55.000 5.01 0.00 0.00 4.46
221 222 0.815615 GAATTAGCAGGCCAGGGTCG 60.816 60.000 5.01 0.00 0.00 4.79
222 223 1.271840 AATTAGCAGGCCAGGGTCGA 61.272 55.000 5.01 0.00 0.00 4.20
223 224 1.690219 ATTAGCAGGCCAGGGTCGAG 61.690 60.000 5.01 0.00 0.00 4.04
224 225 2.798445 TTAGCAGGCCAGGGTCGAGA 62.798 60.000 5.01 0.00 0.00 4.04
225 226 4.459089 GCAGGCCAGGGTCGAGAC 62.459 72.222 5.01 0.00 0.00 3.36
226 227 4.135153 CAGGCCAGGGTCGAGACG 62.135 72.222 5.01 0.00 0.00 4.18
232 233 3.736224 AGGGTCGAGACGGGGCTA 61.736 66.667 0.00 0.00 0.00 3.93
233 234 3.525545 GGGTCGAGACGGGGCTAC 61.526 72.222 0.00 0.00 0.00 3.58
234 235 2.753043 GGTCGAGACGGGGCTACA 60.753 66.667 0.00 0.00 0.00 2.74
235 236 2.488820 GTCGAGACGGGGCTACAC 59.511 66.667 0.00 0.00 0.00 2.90
236 237 2.034532 TCGAGACGGGGCTACACA 59.965 61.111 0.00 0.00 0.00 3.72
237 238 2.044555 TCGAGACGGGGCTACACAG 61.045 63.158 0.00 0.00 0.00 3.66
283 284 3.118972 TCGAATGCGTATTTCGATTAGCG 59.881 43.478 13.48 5.40 42.86 4.26
299 303 1.654137 GCGGTTCAAGTTGTGCGTG 60.654 57.895 2.11 0.00 0.00 5.34
300 304 1.719117 CGGTTCAAGTTGTGCGTGT 59.281 52.632 2.11 0.00 0.00 4.49
301 305 0.588730 CGGTTCAAGTTGTGCGTGTG 60.589 55.000 2.11 0.00 0.00 3.82
302 306 0.450184 GGTTCAAGTTGTGCGTGTGT 59.550 50.000 2.11 0.00 0.00 3.72
388 393 2.590092 CCCACTCACCGAATCCCC 59.410 66.667 0.00 0.00 0.00 4.81
404 410 2.272471 CCCGCTTCCTTCCTTCCC 59.728 66.667 0.00 0.00 0.00 3.97
405 411 2.301738 CCCGCTTCCTTCCTTCCCT 61.302 63.158 0.00 0.00 0.00 4.20
407 413 1.222113 CGCTTCCTTCCTTCCCTCC 59.778 63.158 0.00 0.00 0.00 4.30
409 415 1.908483 CTTCCTTCCTTCCCTCCGG 59.092 63.158 0.00 0.00 0.00 5.14
410 416 2.258748 CTTCCTTCCTTCCCTCCGGC 62.259 65.000 0.00 0.00 0.00 6.13
411 417 2.689034 CCTTCCTTCCCTCCGGCT 60.689 66.667 0.00 0.00 0.00 5.52
508 514 1.153568 CGTCACTGACATGCGGGAT 60.154 57.895 9.84 0.00 32.09 3.85
521 527 0.102481 GCGGGATGAGAACGAAGCTA 59.898 55.000 0.00 0.00 0.00 3.32
551 557 2.611225 GTCAGTGGATCATCCTGACC 57.389 55.000 19.89 8.66 45.92 4.02
570 576 1.411612 CCCTCCACCGTGTAATCCTAC 59.588 57.143 0.00 0.00 0.00 3.18
639 645 2.356125 GGCCCCAATGATATACGCTCAT 60.356 50.000 0.00 0.00 34.86 2.90
689 695 0.326264 AGACATCCCACCAAGACAGC 59.674 55.000 0.00 0.00 0.00 4.40
703 709 4.680237 CAGCCGCGTGGGACAAGA 62.680 66.667 18.41 0.00 44.16 3.02
705 711 4.681978 GCCGCGTGGGACAAGACT 62.682 66.667 18.41 0.00 44.16 3.24
707 713 2.027625 CCGCGTGGGACAAGACTTC 61.028 63.158 7.26 0.00 44.16 3.01
708 714 1.006102 CGCGTGGGACAAGACTTCT 60.006 57.895 0.00 0.00 44.16 2.85
709 715 0.600255 CGCGTGGGACAAGACTTCTT 60.600 55.000 0.00 0.00 44.16 2.52
710 716 1.149148 GCGTGGGACAAGACTTCTTC 58.851 55.000 0.00 0.00 44.16 2.87
711 717 1.797025 CGTGGGACAAGACTTCTTCC 58.203 55.000 4.34 4.34 44.16 3.46
712 718 1.608283 CGTGGGACAAGACTTCTTCCC 60.608 57.143 19.12 19.12 44.16 3.97
713 719 1.700186 GTGGGACAAGACTTCTTCCCT 59.300 52.381 23.57 0.00 44.16 4.20
714 720 1.978580 TGGGACAAGACTTCTTCCCTC 59.021 52.381 23.57 7.10 39.49 4.30
715 721 2.261729 GGGACAAGACTTCTTCCCTCT 58.738 52.381 18.82 0.00 37.16 3.69
716 722 2.235155 GGGACAAGACTTCTTCCCTCTC 59.765 54.545 18.82 0.00 37.16 3.20
717 723 2.235155 GGACAAGACTTCTTCCCTCTCC 59.765 54.545 2.02 0.00 33.11 3.71
918 924 1.402456 CGTCGTCTAGTGTTCCAAGGG 60.402 57.143 0.00 0.00 0.00 3.95
1161 1167 2.521224 GCCCCCTCCTACGACGAT 60.521 66.667 0.00 0.00 0.00 3.73
1227 1233 0.031314 CGACCTCCATCGACTCCATG 59.969 60.000 0.00 0.00 45.13 3.66
1591 1752 2.218759 GTGTGGAAGTTATCTATGCGCG 59.781 50.000 0.00 0.00 0.00 6.86
1595 1756 4.090066 GTGGAAGTTATCTATGCGCGTATG 59.910 45.833 20.45 9.82 0.00 2.39
1637 1798 7.764443 TGAGTAGAATCTGTAACTTGCCAATAC 59.236 37.037 0.00 0.00 0.00 1.89
1639 1800 5.730550 AGAATCTGTAACTTGCCAATACGA 58.269 37.500 0.00 0.00 0.00 3.43
1665 1826 7.896383 ATAGGTTTGCATTGGTATTACACAT 57.104 32.000 0.00 0.00 0.00 3.21
1804 1965 7.834681 AGATCTTAGACCAGTCTGTACATGTTA 59.165 37.037 2.30 0.00 40.71 2.41
1835 1996 0.940126 CTTAGGCGCCTATGCAACAG 59.060 55.000 35.60 24.24 37.32 3.16
1842 2003 2.729156 GCGCCTATGCAACAGAAGTTTC 60.729 50.000 0.00 0.00 35.28 2.78
1941 2102 8.489990 AGTAGAATCAGTTGACATTGATGAAG 57.510 34.615 0.00 0.00 34.43 3.02
1971 2132 4.338012 TCGTAAGGGGCAGATTATATCGA 58.662 43.478 0.00 0.00 38.47 3.59
2027 2188 1.303317 GGGGTGTGCCAACTTCGAT 60.303 57.895 0.00 0.00 36.17 3.59
2057 2218 9.971922 ATTGAGCAAATTATAATAGAAGTTGGC 57.028 29.630 9.36 3.13 33.60 4.52
2058 2219 7.639039 TGAGCAAATTATAATAGAAGTTGGCG 58.361 34.615 9.36 0.00 33.60 5.69
2097 2258 6.183361 TGGAGTTTGGTTTGCCTAATGAAATT 60.183 34.615 0.00 0.00 41.28 1.82
2182 2343 0.990374 AGCTCCCTGATCAGTTTGCT 59.010 50.000 21.11 20.79 0.00 3.91
2183 2344 1.353694 AGCTCCCTGATCAGTTTGCTT 59.646 47.619 21.11 8.83 0.00 3.91
2221 2382 4.109766 TCGTAACAGATGCAAGTTATCCG 58.890 43.478 11.36 11.07 33.30 4.18
2256 2417 1.757764 GCCAACCACTTTTTCCCCTCT 60.758 52.381 0.00 0.00 0.00 3.69
2321 2482 8.458052 TGATACATTGGTACATGAATTTGTGAC 58.542 33.333 0.00 0.00 39.30 3.67
2426 2601 5.743636 ATGGGTTATGCAACAAAGTTGAT 57.256 34.783 13.58 6.96 36.29 2.57
2454 2629 6.294508 GGTTATGAACTTGTTGCCTGTTATGT 60.295 38.462 0.00 0.00 0.00 2.29
2618 2794 3.817647 ACTGCTGGTGCTAAAGAAAAGAG 59.182 43.478 0.00 0.00 40.48 2.85
2965 3141 8.624367 TGTGGAGGACTTCGAAAATATTTTTA 57.376 30.769 14.45 4.17 0.00 1.52
3219 3395 3.420893 AGCAAAACGAAGGGATGATGAA 58.579 40.909 0.00 0.00 0.00 2.57
3260 3436 6.608002 ACCCAGAACTACAACCATAACAAAAA 59.392 34.615 0.00 0.00 0.00 1.94
3405 3581 2.158711 TGCTATGAAGGAAGCCATGGAG 60.159 50.000 18.40 0.00 37.97 3.86
3657 3833 2.245287 GAGAGAAAGAGGGAGGGGTAGA 59.755 54.545 0.00 0.00 0.00 2.59
3737 3913 0.767375 AAAGCAGAGAGGGAAGCACA 59.233 50.000 0.00 0.00 0.00 4.57
4359 4535 6.839124 TCCGTAACAGGAGTACTATTTTGA 57.161 37.500 0.00 0.00 34.92 2.69
4731 5206 5.128008 AGGCAGAAAGAGATGTAAGTACTCC 59.872 44.000 0.00 0.00 0.00 3.85
4733 5208 6.321690 GGCAGAAAGAGATGTAAGTACTCCTA 59.678 42.308 0.00 0.00 0.00 2.94
5375 5868 9.880157 ATAGTTTTGATTATTTGCTGATGCTTT 57.120 25.926 0.00 0.00 40.48 3.51
5396 5889 8.846211 TGCTTTAAATGTACTATATTCCCAAGC 58.154 33.333 0.00 0.00 31.30 4.01
5452 5945 0.607489 GGTGCATGCAACTCCACTCT 60.607 55.000 28.48 0.00 0.00 3.24
5511 6004 1.021202 TCGCTTGGTTGGTTGTCTTG 58.979 50.000 0.00 0.00 0.00 3.02
5519 6012 2.032924 GGTTGGTTGTCTTGTTTCCTCG 59.967 50.000 0.00 0.00 0.00 4.63
5639 6136 5.259632 AGTTTTCTCCCTTCTGGATTCATG 58.740 41.667 0.00 0.00 44.07 3.07
5640 6137 5.014544 AGTTTTCTCCCTTCTGGATTCATGA 59.985 40.000 0.00 0.00 44.07 3.07
5641 6138 5.722172 TTTCTCCCTTCTGGATTCATGAT 57.278 39.130 0.00 0.00 44.07 2.45
5658 6155 4.524053 CATGATATCTCATCATGGGTGGG 58.476 47.826 16.11 0.00 47.00 4.61
5808 6305 8.754080 GGACATCAATAGTGCTCTAGGTATATT 58.246 37.037 1.55 0.00 0.00 1.28
6165 6664 8.742777 TCATGAATCTGAAAAGGGATAAAACTG 58.257 33.333 0.00 0.00 0.00 3.16
6191 6690 0.535102 CAAAAGGTGGACAGCGGAGT 60.535 55.000 0.00 0.00 0.00 3.85
6328 6827 1.917495 CCAGATGAGGGCATGACCA 59.083 57.895 22.78 0.00 42.05 4.02
6341 6840 0.632835 ATGACCATGCCACCCATCTT 59.367 50.000 0.00 0.00 29.71 2.40
6361 6860 1.526225 GGGGGCTAGAATGGTTCGC 60.526 63.158 0.00 0.00 34.02 4.70
6472 6972 2.819608 ACTGGCGCAAGTTTTGATATGT 59.180 40.909 12.94 0.00 41.68 2.29
6540 7040 1.971357 ACATATCCGGTAGCCAAGAGG 59.029 52.381 0.00 0.00 38.23 3.69
6541 7041 2.248248 CATATCCGGTAGCCAAGAGGA 58.752 52.381 0.00 0.00 36.89 3.71
6542 7042 1.996798 TATCCGGTAGCCAAGAGGAG 58.003 55.000 0.00 0.00 36.89 3.69
6543 7043 0.032017 ATCCGGTAGCCAAGAGGAGT 60.032 55.000 0.00 0.00 36.89 3.85
6544 7044 0.970937 TCCGGTAGCCAAGAGGAGTG 60.971 60.000 0.00 0.00 36.89 3.51
6545 7045 1.517832 CGGTAGCCAAGAGGAGTGG 59.482 63.158 0.00 0.00 39.33 4.00
6546 7046 0.970937 CGGTAGCCAAGAGGAGTGGA 60.971 60.000 0.00 0.00 38.54 4.02
6547 7047 0.537653 GGTAGCCAAGAGGAGTGGAC 59.462 60.000 0.00 0.00 38.54 4.02
6591 7091 2.612746 TAAGGAGGGGTGGGTGGC 60.613 66.667 0.00 0.00 0.00 5.01
6665 7197 1.545651 GGTGGGTGGGAAGAGAACAAG 60.546 57.143 0.00 0.00 0.00 3.16
6686 7218 4.024670 AGGAAAACGTAGGCTCTGATACT 58.975 43.478 0.00 0.00 0.00 2.12
6717 7249 0.036164 TGCACCAATCAGTTAGCCGT 59.964 50.000 0.00 0.00 0.00 5.68
6782 7314 5.196695 TGGTAAATGTGCTGCAATACCATA 58.803 37.500 22.95 10.31 43.05 2.74
6927 7461 2.620251 TTGCTGTGAGCTGTACTTGT 57.380 45.000 0.00 0.00 42.97 3.16
6943 7477 8.988064 CTGTACTTGTAATACAGCCATATAGG 57.012 38.462 0.00 0.00 42.19 2.57
7070 7614 6.426980 TTGCTATCAACAGTCAAAGCATAG 57.573 37.500 0.00 0.00 39.50 2.23
7147 7693 1.451927 CCCGGTGGTGATCCATGTG 60.452 63.158 0.00 0.00 46.20 3.21
7156 7702 5.163622 GGTGGTGATCCATGTGTTATTTCTG 60.164 44.000 0.00 0.00 46.20 3.02
7172 7718 3.857157 TTCTGAACAGGTACTTTGGCT 57.143 42.857 1.93 0.00 34.60 4.75
7407 7955 5.355350 GCTCAGGATGTGTACATTAAAGCTT 59.645 40.000 0.00 0.00 36.57 3.74
7449 7997 4.214971 CCTGCATGTTGCTGAATCCTATAC 59.785 45.833 7.80 0.00 45.31 1.47
7502 8050 9.906660 TTTTATTCAATCTTTGCGATTTGTACT 57.093 25.926 0.00 0.00 40.33 2.73
7600 8186 5.675538 GATACACCAGAGCAGAAATAACCT 58.324 41.667 0.00 0.00 0.00 3.50
7677 8263 3.832490 AGGCCTGGAACAAATTTAACTCC 59.168 43.478 3.11 0.00 38.70 3.85
7721 8307 0.615331 TGAGGACCATCTTCACCTGC 59.385 55.000 0.00 0.00 32.53 4.85
7745 8331 1.634459 AGGTACTCGAGGAGAAGTCCA 59.366 52.381 18.41 0.00 46.80 4.02
7771 8358 0.029834 GCGCATCATACCTGCTTTGG 59.970 55.000 0.30 0.00 37.48 3.28
7794 8381 2.069776 TTGAGGTGCTCAAGGAGGG 58.930 57.895 0.00 0.00 44.27 4.30
7797 8384 1.152030 AGGTGCTCAAGGAGGGACA 60.152 57.895 0.00 0.00 0.00 4.02
7838 8425 0.893727 ATGCCGTCAGGGGAAACAAC 60.894 55.000 0.00 0.00 40.78 3.32
7944 8531 2.216898 TGTGCATGTGTTGATTCGACA 58.783 42.857 2.43 2.43 0.00 4.35
8028 8615 1.305930 GCTCGGTTGATGGTGGGTTC 61.306 60.000 0.00 0.00 0.00 3.62
8293 8881 1.698506 CTGGTTTGCCCTGTTTACCA 58.301 50.000 0.00 0.00 37.34 3.25
8298 8886 1.781786 TTGCCCTGTTTACCAAGCAA 58.218 45.000 0.00 0.00 39.06 3.91
8301 8889 1.327303 CCCTGTTTACCAAGCAAGCA 58.673 50.000 0.00 0.00 0.00 3.91
8350 8938 1.202830 TCAAATTGCCCTGTACGTGGT 60.203 47.619 0.00 0.00 0.00 4.16
8366 8954 5.906113 ACGTGGTTGAATTATTATGCCAA 57.094 34.783 0.00 0.00 0.00 4.52
8372 8960 6.016360 TGGTTGAATTATTATGCCAAGATCCG 60.016 38.462 0.00 0.00 0.00 4.18
8393 8981 3.242543 CGCCAGCTGTCATCAGAAATAAC 60.243 47.826 13.81 0.00 43.76 1.89
8403 8991 6.867816 TGTCATCAGAAATAACCAAATGCAAC 59.132 34.615 0.00 0.00 0.00 4.17
8404 8992 6.867816 GTCATCAGAAATAACCAAATGCAACA 59.132 34.615 0.00 0.00 0.00 3.33
8407 8995 6.164876 TCAGAAATAACCAAATGCAACATGG 58.835 36.000 12.69 12.69 40.16 3.66
8416 9004 8.072321 AACCAAATGCAACATGGTACATATAA 57.928 30.769 18.34 0.00 46.46 0.98
8417 9005 8.535335 AACCAAATGCAACATGGTACATATAAA 58.465 29.630 18.34 0.00 46.46 1.40
8439 9027 6.764308 AACACTTAAATATGTCAGCATGCT 57.236 33.333 16.30 16.30 36.58 3.79
8440 9028 7.864108 AACACTTAAATATGTCAGCATGCTA 57.136 32.000 22.19 5.30 36.58 3.49
8441 9029 8.455903 AACACTTAAATATGTCAGCATGCTAT 57.544 30.769 22.19 13.37 36.58 2.97
8442 9030 7.868775 ACACTTAAATATGTCAGCATGCTATG 58.131 34.615 22.19 10.55 36.58 2.23
8443 9031 7.716560 ACACTTAAATATGTCAGCATGCTATGA 59.283 33.333 22.19 13.07 36.58 2.15
8444 9032 8.727910 CACTTAAATATGTCAGCATGCTATGAT 58.272 33.333 22.19 14.07 36.58 2.45
8445 9033 9.948964 ACTTAAATATGTCAGCATGCTATGATA 57.051 29.630 22.19 14.20 36.58 2.15
8448 9036 8.625786 AAATATGTCAGCATGCTATGATAACA 57.374 30.769 22.19 16.78 36.58 2.41
8449 9037 7.845066 ATATGTCAGCATGCTATGATAACAG 57.155 36.000 22.19 4.58 36.58 3.16
8450 9038 5.027293 TGTCAGCATGCTATGATAACAGT 57.973 39.130 22.19 0.00 34.76 3.55
8451 9039 6.160576 TGTCAGCATGCTATGATAACAGTA 57.839 37.500 22.19 0.00 34.76 2.74
8452 9040 5.985530 TGTCAGCATGCTATGATAACAGTAC 59.014 40.000 22.19 2.30 34.76 2.73
8453 9041 6.183360 TGTCAGCATGCTATGATAACAGTACT 60.183 38.462 22.19 0.00 34.76 2.73
8454 9042 6.703607 GTCAGCATGCTATGATAACAGTACTT 59.296 38.462 22.19 0.00 34.76 2.24
8455 9043 6.925718 TCAGCATGCTATGATAACAGTACTTC 59.074 38.462 22.19 0.00 34.76 3.01
8456 9044 6.146837 CAGCATGCTATGATAACAGTACTTCC 59.853 42.308 22.19 0.00 0.00 3.46
8457 9045 6.042552 AGCATGCTATGATAACAGTACTTCCT 59.957 38.462 21.21 0.00 0.00 3.36
8458 9046 7.233553 AGCATGCTATGATAACAGTACTTCCTA 59.766 37.037 21.21 0.00 0.00 2.94
8459 9047 7.872993 GCATGCTATGATAACAGTACTTCCTAA 59.127 37.037 11.37 0.00 0.00 2.69
8460 9048 9.764363 CATGCTATGATAACAGTACTTCCTAAA 57.236 33.333 0.00 0.00 0.00 1.85
8461 9049 9.765795 ATGCTATGATAACAGTACTTCCTAAAC 57.234 33.333 0.00 0.00 0.00 2.01
8462 9050 8.978472 TGCTATGATAACAGTACTTCCTAAACT 58.022 33.333 0.00 0.00 0.00 2.66
8463 9051 9.819267 GCTATGATAACAGTACTTCCTAAACTT 57.181 33.333 0.00 0.00 0.00 2.66
8467 9055 8.780249 TGATAACAGTACTTCCTAAACTTTTGC 58.220 33.333 0.00 0.00 0.00 3.68
8468 9056 8.919777 ATAACAGTACTTCCTAAACTTTTGCT 57.080 30.769 0.00 0.00 0.00 3.91
8469 9057 7.640597 AACAGTACTTCCTAAACTTTTGCTT 57.359 32.000 0.00 0.00 0.00 3.91
8470 9058 7.640597 ACAGTACTTCCTAAACTTTTGCTTT 57.359 32.000 0.00 0.00 0.00 3.51
8471 9059 7.704271 ACAGTACTTCCTAAACTTTTGCTTTC 58.296 34.615 0.00 0.00 0.00 2.62
8472 9060 7.139392 CAGTACTTCCTAAACTTTTGCTTTCC 58.861 38.462 0.00 0.00 0.00 3.13
8473 9061 5.531122 ACTTCCTAAACTTTTGCTTTCCC 57.469 39.130 0.00 0.00 0.00 3.97
8474 9062 4.037565 ACTTCCTAAACTTTTGCTTTCCCG 59.962 41.667 0.00 0.00 0.00 5.14
8475 9063 3.558033 TCCTAAACTTTTGCTTTCCCGT 58.442 40.909 0.00 0.00 0.00 5.28
8476 9064 3.955551 TCCTAAACTTTTGCTTTCCCGTT 59.044 39.130 0.00 0.00 0.00 4.44
8477 9065 4.403113 TCCTAAACTTTTGCTTTCCCGTTT 59.597 37.500 0.00 0.00 0.00 3.60
8478 9066 5.105269 TCCTAAACTTTTGCTTTCCCGTTTT 60.105 36.000 0.00 0.00 0.00 2.43
8479 9067 6.096564 TCCTAAACTTTTGCTTTCCCGTTTTA 59.903 34.615 0.00 0.00 0.00 1.52
8480 9068 6.757478 CCTAAACTTTTGCTTTCCCGTTTTAA 59.243 34.615 0.00 0.00 0.00 1.52
8481 9069 6.656314 AAACTTTTGCTTTCCCGTTTTAAG 57.344 33.333 0.00 0.00 0.00 1.85
8482 9070 5.333299 ACTTTTGCTTTCCCGTTTTAAGT 57.667 34.783 0.00 0.00 0.00 2.24
8483 9071 5.345702 ACTTTTGCTTTCCCGTTTTAAGTC 58.654 37.500 0.00 0.00 0.00 3.01
8484 9072 5.126545 ACTTTTGCTTTCCCGTTTTAAGTCT 59.873 36.000 0.00 0.00 0.00 3.24
8485 9073 4.823790 TTGCTTTCCCGTTTTAAGTCTC 57.176 40.909 0.00 0.00 0.00 3.36
8486 9074 3.811083 TGCTTTCCCGTTTTAAGTCTCA 58.189 40.909 0.00 0.00 0.00 3.27
8487 9075 4.394729 TGCTTTCCCGTTTTAAGTCTCAT 58.605 39.130 0.00 0.00 0.00 2.90
8488 9076 4.825085 TGCTTTCCCGTTTTAAGTCTCATT 59.175 37.500 0.00 0.00 0.00 2.57
8489 9077 5.300792 TGCTTTCCCGTTTTAAGTCTCATTT 59.699 36.000 0.00 0.00 0.00 2.32
8490 9078 5.856986 GCTTTCCCGTTTTAAGTCTCATTTC 59.143 40.000 0.00 0.00 0.00 2.17
8491 9079 6.294010 GCTTTCCCGTTTTAAGTCTCATTTCT 60.294 38.462 0.00 0.00 0.00 2.52
8492 9080 7.094933 GCTTTCCCGTTTTAAGTCTCATTTCTA 60.095 37.037 0.00 0.00 0.00 2.10
8493 9081 8.857694 TTTCCCGTTTTAAGTCTCATTTCTAT 57.142 30.769 0.00 0.00 0.00 1.98
8494 9082 8.857694 TTCCCGTTTTAAGTCTCATTTCTATT 57.142 30.769 0.00 0.00 0.00 1.73
8495 9083 8.263940 TCCCGTTTTAAGTCTCATTTCTATTG 57.736 34.615 0.00 0.00 0.00 1.90
8496 9084 6.967199 CCCGTTTTAAGTCTCATTTCTATTGC 59.033 38.462 0.00 0.00 0.00 3.56
8497 9085 7.148239 CCCGTTTTAAGTCTCATTTCTATTGCT 60.148 37.037 0.00 0.00 0.00 3.91
8498 9086 8.237267 CCGTTTTAAGTCTCATTTCTATTGCTT 58.763 33.333 0.00 0.00 0.00 3.91
8499 9087 9.267096 CGTTTTAAGTCTCATTTCTATTGCTTC 57.733 33.333 0.00 0.00 0.00 3.86
8505 9093 9.842775 AAGTCTCATTTCTATTGCTTCATATCA 57.157 29.630 0.00 0.00 0.00 2.15
8506 9094 9.270640 AGTCTCATTTCTATTGCTTCATATCAC 57.729 33.333 0.00 0.00 0.00 3.06
8507 9095 9.049523 GTCTCATTTCTATTGCTTCATATCACA 57.950 33.333 0.00 0.00 0.00 3.58
8508 9096 9.049523 TCTCATTTCTATTGCTTCATATCACAC 57.950 33.333 0.00 0.00 0.00 3.82
8509 9097 7.854534 TCATTTCTATTGCTTCATATCACACG 58.145 34.615 0.00 0.00 0.00 4.49
8510 9098 5.657470 TTCTATTGCTTCATATCACACGC 57.343 39.130 0.00 0.00 0.00 5.34
8511 9099 4.948847 TCTATTGCTTCATATCACACGCT 58.051 39.130 0.00 0.00 0.00 5.07
8512 9100 4.984785 TCTATTGCTTCATATCACACGCTC 59.015 41.667 0.00 0.00 0.00 5.03
8513 9101 2.671130 TGCTTCATATCACACGCTCA 57.329 45.000 0.00 0.00 0.00 4.26
8514 9102 2.543641 TGCTTCATATCACACGCTCAG 58.456 47.619 0.00 0.00 0.00 3.35
8515 9103 2.166254 TGCTTCATATCACACGCTCAGA 59.834 45.455 0.00 0.00 0.00 3.27
8516 9104 3.181472 TGCTTCATATCACACGCTCAGAT 60.181 43.478 0.00 0.00 0.00 2.90
8517 9105 4.037923 TGCTTCATATCACACGCTCAGATA 59.962 41.667 0.00 0.00 0.00 1.98
8518 9106 5.167121 GCTTCATATCACACGCTCAGATAT 58.833 41.667 0.00 0.00 35.84 1.63
8519 9107 5.636965 GCTTCATATCACACGCTCAGATATT 59.363 40.000 0.00 0.00 33.83 1.28
8520 9108 6.400834 GCTTCATATCACACGCTCAGATATTG 60.401 42.308 0.00 0.00 33.83 1.90
8521 9109 6.331369 TCATATCACACGCTCAGATATTGA 57.669 37.500 0.00 0.00 33.83 2.57
8536 9124 8.929260 TCAGATATTGAGGTGCATTAAATCAT 57.071 30.769 0.00 0.00 0.00 2.45
8537 9125 9.358406 TCAGATATTGAGGTGCATTAAATCATT 57.642 29.630 0.00 0.00 0.00 2.57
8538 9126 9.406828 CAGATATTGAGGTGCATTAAATCATTG 57.593 33.333 0.00 0.00 0.00 2.82
8539 9127 8.086522 AGATATTGAGGTGCATTAAATCATTGC 58.913 33.333 0.00 0.00 36.91 3.56
8540 9128 5.402997 TTGAGGTGCATTAAATCATTGCA 57.597 34.783 0.00 0.00 43.63 4.08
8541 9129 5.601583 TGAGGTGCATTAAATCATTGCAT 57.398 34.783 4.14 0.00 46.90 3.96
8542 9130 6.712179 TGAGGTGCATTAAATCATTGCATA 57.288 33.333 4.14 0.00 46.90 3.14
8543 9131 6.506147 TGAGGTGCATTAAATCATTGCATAC 58.494 36.000 4.14 1.89 46.90 2.39
8544 9132 6.096564 TGAGGTGCATTAAATCATTGCATACA 59.903 34.615 4.14 3.36 46.90 2.29
8545 9133 6.876155 AGGTGCATTAAATCATTGCATACAA 58.124 32.000 4.14 0.00 46.90 2.41
8546 9134 6.982141 AGGTGCATTAAATCATTGCATACAAG 59.018 34.615 4.14 0.00 46.90 3.16
8547 9135 6.201425 GGTGCATTAAATCATTGCATACAAGG 59.799 38.462 4.14 0.00 46.90 3.61
8597 9185 8.352201 TCTTAGTTATTTATTGGTCATGCATGC 58.648 33.333 22.25 11.82 0.00 4.06
8598 9186 6.468333 AGTTATTTATTGGTCATGCATGCA 57.532 33.333 25.04 25.04 0.00 3.96
8599 9187 7.058023 AGTTATTTATTGGTCATGCATGCAT 57.942 32.000 27.46 27.46 37.08 3.96
8600 9188 7.502696 AGTTATTTATTGGTCATGCATGCATT 58.497 30.769 30.32 17.17 33.90 3.56
8601 9189 8.640651 AGTTATTTATTGGTCATGCATGCATTA 58.359 29.630 30.32 20.49 33.90 1.90
8602 9190 8.702438 GTTATTTATTGGTCATGCATGCATTAC 58.298 33.333 30.32 29.55 33.90 1.89
8603 9191 5.848833 TTATTGGTCATGCATGCATTACA 57.151 34.783 34.22 26.87 33.56 2.41
8604 9192 4.739587 ATTGGTCATGCATGCATTACAA 57.260 36.364 34.22 31.33 33.56 2.41
8605 9193 4.739587 TTGGTCATGCATGCATTACAAT 57.260 36.364 34.22 14.30 33.56 2.71
8606 9194 4.739587 TGGTCATGCATGCATTACAATT 57.260 36.364 34.22 13.62 33.56 2.32
8607 9195 5.848833 TGGTCATGCATGCATTACAATTA 57.151 34.783 34.22 20.25 33.56 1.40
8608 9196 6.218108 TGGTCATGCATGCATTACAATTAA 57.782 33.333 34.22 18.00 33.56 1.40
8609 9197 6.818233 TGGTCATGCATGCATTACAATTAAT 58.182 32.000 34.22 11.57 33.56 1.40
8610 9198 6.702282 TGGTCATGCATGCATTACAATTAATG 59.298 34.615 34.22 21.11 45.25 1.90
8646 9234 9.410556 ACACAATAGTTTGATAAAAATGAGTGC 57.589 29.630 0.00 0.00 36.64 4.40
8647 9235 9.409312 CACAATAGTTTGATAAAAATGAGTGCA 57.591 29.630 0.00 0.00 36.64 4.57
8665 9253 7.974675 TGAGTGCATTAATAAAGTACTTCTGC 58.025 34.615 8.95 11.27 0.00 4.26
8666 9254 7.606073 TGAGTGCATTAATAAAGTACTTCTGCA 59.394 33.333 8.95 13.43 34.98 4.41
8667 9255 8.335532 AGTGCATTAATAAAGTACTTCTGCAA 57.664 30.769 8.95 2.15 38.65 4.08
8668 9256 8.792633 AGTGCATTAATAAAGTACTTCTGCAAA 58.207 29.630 8.95 1.11 38.65 3.68
8669 9257 9.065871 GTGCATTAATAAAGTACTTCTGCAAAG 57.934 33.333 8.95 6.98 38.65 2.77
8670 9258 8.792633 TGCATTAATAAAGTACTTCTGCAAAGT 58.207 29.630 8.95 15.40 34.48 2.66
8687 9275 9.474313 TCTGCAAAGTATTAAAATTATCCCACT 57.526 29.630 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.899226 AATGAGTTTTCAGTTTTATCTTAGCAC 57.101 29.630 0.00 0.00 36.61 4.40
9 10 9.793259 AGGATCTGTAATGAGTTTTCAGTTTTA 57.207 29.630 0.00 0.00 36.61 1.52
10 11 8.697507 AGGATCTGTAATGAGTTTTCAGTTTT 57.302 30.769 0.00 0.00 36.61 2.43
11 12 8.697507 AAGGATCTGTAATGAGTTTTCAGTTT 57.302 30.769 0.00 0.00 36.61 2.66
12 13 8.160106 AGAAGGATCTGTAATGAGTTTTCAGTT 58.840 33.333 0.00 0.00 33.53 3.16
13 14 7.684529 AGAAGGATCTGTAATGAGTTTTCAGT 58.315 34.615 0.00 0.00 33.53 3.41
14 15 7.279758 GGAGAAGGATCTGTAATGAGTTTTCAG 59.720 40.741 0.00 0.00 34.45 3.02
15 16 7.038017 AGGAGAAGGATCTGTAATGAGTTTTCA 60.038 37.037 0.00 0.00 35.54 2.69
16 17 7.279758 CAGGAGAAGGATCTGTAATGAGTTTTC 59.720 40.741 0.00 0.00 35.54 2.29
17 18 7.108847 CAGGAGAAGGATCTGTAATGAGTTTT 58.891 38.462 0.00 0.00 35.54 2.43
18 19 6.352565 CCAGGAGAAGGATCTGTAATGAGTTT 60.353 42.308 0.00 0.00 35.54 2.66
19 20 5.130145 CCAGGAGAAGGATCTGTAATGAGTT 59.870 44.000 0.00 0.00 35.54 3.01
20 21 4.653341 CCAGGAGAAGGATCTGTAATGAGT 59.347 45.833 0.00 0.00 35.54 3.41
21 22 4.898265 TCCAGGAGAAGGATCTGTAATGAG 59.102 45.833 0.00 0.00 35.54 2.90
22 23 4.883759 TCCAGGAGAAGGATCTGTAATGA 58.116 43.478 0.00 0.00 35.54 2.57
23 24 5.822132 ATCCAGGAGAAGGATCTGTAATG 57.178 43.478 0.00 0.00 42.07 1.90
32 33 1.667154 CGTGCGATCCAGGAGAAGGA 61.667 60.000 0.00 0.00 39.97 3.36
33 34 1.227089 CGTGCGATCCAGGAGAAGG 60.227 63.158 0.00 0.00 0.00 3.46
34 35 1.227089 CCGTGCGATCCAGGAGAAG 60.227 63.158 0.00 0.00 0.00 2.85
35 36 2.892640 CCGTGCGATCCAGGAGAA 59.107 61.111 0.00 0.00 0.00 2.87
36 37 3.838271 GCCGTGCGATCCAGGAGA 61.838 66.667 0.00 0.00 0.00 3.71
37 38 4.147449 TGCCGTGCGATCCAGGAG 62.147 66.667 0.00 0.00 0.00 3.69
38 39 4.451150 GTGCCGTGCGATCCAGGA 62.451 66.667 0.00 0.00 0.00 3.86
52 53 4.489771 ATACCCAGGCCTGCGTGC 62.490 66.667 29.48 0.00 0.00 5.34
53 54 2.514592 CATACCCAGGCCTGCGTG 60.515 66.667 29.48 20.48 0.00 5.34
54 55 2.687200 TCATACCCAGGCCTGCGT 60.687 61.111 28.39 26.91 0.00 5.24
55 56 1.399744 TACTCATACCCAGGCCTGCG 61.400 60.000 28.39 22.15 0.00 5.18
56 57 0.394565 CTACTCATACCCAGGCCTGC 59.605 60.000 28.39 0.00 0.00 4.85
57 58 1.051812 CCTACTCATACCCAGGCCTG 58.948 60.000 26.87 26.87 0.00 4.85
58 59 0.104934 CCCTACTCATACCCAGGCCT 60.105 60.000 0.00 0.00 0.00 5.19
59 60 1.128188 CCCCTACTCATACCCAGGCC 61.128 65.000 0.00 0.00 0.00 5.19
60 61 0.400093 ACCCCTACTCATACCCAGGC 60.400 60.000 0.00 0.00 0.00 4.85
61 62 1.344087 ACACCCCTACTCATACCCAGG 60.344 57.143 0.00 0.00 0.00 4.45
62 63 2.176247 ACACCCCTACTCATACCCAG 57.824 55.000 0.00 0.00 0.00 4.45
63 64 2.653543 AACACCCCTACTCATACCCA 57.346 50.000 0.00 0.00 0.00 4.51
64 65 4.657039 TGATAAACACCCCTACTCATACCC 59.343 45.833 0.00 0.00 0.00 3.69
65 66 5.881923 TGATAAACACCCCTACTCATACC 57.118 43.478 0.00 0.00 0.00 2.73
66 67 5.701290 GCATGATAAACACCCCTACTCATAC 59.299 44.000 0.00 0.00 0.00 2.39
67 68 5.606749 AGCATGATAAACACCCCTACTCATA 59.393 40.000 0.00 0.00 0.00 2.15
68 69 4.413520 AGCATGATAAACACCCCTACTCAT 59.586 41.667 0.00 0.00 0.00 2.90
69 70 3.780294 AGCATGATAAACACCCCTACTCA 59.220 43.478 0.00 0.00 0.00 3.41
70 71 4.130118 CAGCATGATAAACACCCCTACTC 58.870 47.826 0.00 0.00 39.69 2.59
71 72 3.780294 TCAGCATGATAAACACCCCTACT 59.220 43.478 0.00 0.00 42.56 2.57
72 73 4.150897 TCAGCATGATAAACACCCCTAC 57.849 45.455 0.00 0.00 42.56 3.18
86 87 1.991264 CGCTCCGAAGATATCAGCATG 59.009 52.381 5.32 0.00 37.54 4.06
87 88 1.615883 ACGCTCCGAAGATATCAGCAT 59.384 47.619 5.32 0.00 29.68 3.79
88 89 1.001268 GACGCTCCGAAGATATCAGCA 60.001 52.381 5.32 0.00 29.68 4.41
89 90 1.692296 GACGCTCCGAAGATATCAGC 58.308 55.000 5.32 3.77 0.00 4.26
90 91 1.264557 ACGACGCTCCGAAGATATCAG 59.735 52.381 5.32 0.00 0.00 2.90
91 92 1.306148 ACGACGCTCCGAAGATATCA 58.694 50.000 5.32 0.00 0.00 2.15
92 93 2.402640 AACGACGCTCCGAAGATATC 57.597 50.000 0.00 0.00 0.00 1.63
93 94 2.460918 CAAACGACGCTCCGAAGATAT 58.539 47.619 0.00 0.00 0.00 1.63
94 95 1.904144 CAAACGACGCTCCGAAGATA 58.096 50.000 0.00 0.00 0.00 1.98
95 96 1.352156 GCAAACGACGCTCCGAAGAT 61.352 55.000 0.00 0.00 0.00 2.40
96 97 2.019951 GCAAACGACGCTCCGAAGA 61.020 57.895 0.00 0.00 0.00 2.87
97 98 1.557443 AAGCAAACGACGCTCCGAAG 61.557 55.000 0.00 0.00 39.29 3.79
98 99 1.554042 GAAGCAAACGACGCTCCGAA 61.554 55.000 0.00 0.00 39.29 4.30
99 100 2.019951 GAAGCAAACGACGCTCCGA 61.020 57.895 0.00 0.00 39.29 4.55
100 101 2.470286 GAAGCAAACGACGCTCCG 59.530 61.111 0.00 0.00 39.29 4.63
101 102 1.298859 ATGGAAGCAAACGACGCTCC 61.299 55.000 0.00 0.00 39.29 4.70
102 103 0.095417 GATGGAAGCAAACGACGCTC 59.905 55.000 0.00 0.00 39.29 5.03
103 104 1.298859 GGATGGAAGCAAACGACGCT 61.299 55.000 0.00 0.00 42.98 5.07
104 105 1.134694 GGATGGAAGCAAACGACGC 59.865 57.895 0.00 0.00 0.00 5.19
105 106 1.156736 AAGGATGGAAGCAAACGACG 58.843 50.000 0.00 0.00 0.00 5.12
106 107 2.814336 AGAAAGGATGGAAGCAAACGAC 59.186 45.455 0.00 0.00 0.00 4.34
107 108 2.813754 CAGAAAGGATGGAAGCAAACGA 59.186 45.455 0.00 0.00 0.00 3.85
108 109 2.813754 TCAGAAAGGATGGAAGCAAACG 59.186 45.455 0.00 0.00 0.00 3.60
109 110 4.704057 AGATCAGAAAGGATGGAAGCAAAC 59.296 41.667 0.00 0.00 0.00 2.93
110 111 4.927049 AGATCAGAAAGGATGGAAGCAAA 58.073 39.130 0.00 0.00 0.00 3.68
111 112 4.581309 AGATCAGAAAGGATGGAAGCAA 57.419 40.909 0.00 0.00 0.00 3.91
112 113 4.581309 AAGATCAGAAAGGATGGAAGCA 57.419 40.909 0.00 0.00 0.00 3.91
113 114 5.416952 TCAAAAGATCAGAAAGGATGGAAGC 59.583 40.000 0.00 0.00 0.00 3.86
114 115 6.404513 GCTCAAAAGATCAGAAAGGATGGAAG 60.405 42.308 0.00 0.00 0.00 3.46
115 116 5.416952 GCTCAAAAGATCAGAAAGGATGGAA 59.583 40.000 0.00 0.00 0.00 3.53
116 117 4.946157 GCTCAAAAGATCAGAAAGGATGGA 59.054 41.667 0.00 0.00 0.00 3.41
117 118 4.948621 AGCTCAAAAGATCAGAAAGGATGG 59.051 41.667 0.00 0.00 0.00 3.51
118 119 6.150641 TCAAGCTCAAAAGATCAGAAAGGATG 59.849 38.462 0.00 0.00 0.00 3.51
119 120 6.243900 TCAAGCTCAAAAGATCAGAAAGGAT 58.756 36.000 0.00 0.00 0.00 3.24
120 121 5.624159 TCAAGCTCAAAAGATCAGAAAGGA 58.376 37.500 0.00 0.00 0.00 3.36
121 122 5.954296 TCAAGCTCAAAAGATCAGAAAGG 57.046 39.130 0.00 0.00 0.00 3.11
122 123 6.862090 CCTTTCAAGCTCAAAAGATCAGAAAG 59.138 38.462 17.85 0.00 39.79 2.62
123 124 6.322201 ACCTTTCAAGCTCAAAAGATCAGAAA 59.678 34.615 17.85 0.00 35.02 2.52
124 125 5.829924 ACCTTTCAAGCTCAAAAGATCAGAA 59.170 36.000 17.85 0.00 35.02 3.02
125 126 5.240183 CACCTTTCAAGCTCAAAAGATCAGA 59.760 40.000 17.85 0.00 35.02 3.27
126 127 5.458891 CACCTTTCAAGCTCAAAAGATCAG 58.541 41.667 17.85 7.42 35.02 2.90
127 128 4.279169 CCACCTTTCAAGCTCAAAAGATCA 59.721 41.667 17.85 0.00 35.02 2.92
128 129 4.279420 ACCACCTTTCAAGCTCAAAAGATC 59.721 41.667 17.85 0.00 35.02 2.75
129 130 4.038402 CACCACCTTTCAAGCTCAAAAGAT 59.962 41.667 17.85 2.79 35.02 2.40
130 131 3.381272 CACCACCTTTCAAGCTCAAAAGA 59.619 43.478 17.85 0.00 35.02 2.52
131 132 3.709987 CACCACCTTTCAAGCTCAAAAG 58.290 45.455 11.87 11.87 33.26 2.27
132 133 2.159114 GCACCACCTTTCAAGCTCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
133 134 1.408702 GCACCACCTTTCAAGCTCAAA 59.591 47.619 0.00 0.00 0.00 2.69
134 135 1.032014 GCACCACCTTTCAAGCTCAA 58.968 50.000 0.00 0.00 0.00 3.02
135 136 0.183492 AGCACCACCTTTCAAGCTCA 59.817 50.000 0.00 0.00 0.00 4.26
136 137 0.595095 CAGCACCACCTTTCAAGCTC 59.405 55.000 0.00 0.00 0.00 4.09
137 138 0.106519 ACAGCACCACCTTTCAAGCT 60.107 50.000 0.00 0.00 0.00 3.74
138 139 1.537202 CTACAGCACCACCTTTCAAGC 59.463 52.381 0.00 0.00 0.00 4.01
139 140 1.537202 GCTACAGCACCACCTTTCAAG 59.463 52.381 0.00 0.00 41.59 3.02
140 141 1.604604 GCTACAGCACCACCTTTCAA 58.395 50.000 0.00 0.00 41.59 2.69
141 142 0.250727 GGCTACAGCACCACCTTTCA 60.251 55.000 3.24 0.00 44.36 2.69
142 143 1.298859 CGGCTACAGCACCACCTTTC 61.299 60.000 3.24 0.00 44.36 2.62
143 144 1.302511 CGGCTACAGCACCACCTTT 60.303 57.895 3.24 0.00 44.36 3.11
144 145 2.347490 CGGCTACAGCACCACCTT 59.653 61.111 3.24 0.00 44.36 3.50
145 146 4.394712 GCGGCTACAGCACCACCT 62.395 66.667 3.24 0.00 44.36 4.00
147 148 4.394712 AGGCGGCTACAGCACCAC 62.395 66.667 11.03 0.00 44.36 4.16
148 149 4.393155 CAGGCGGCTACAGCACCA 62.393 66.667 12.74 0.00 44.36 4.17
153 154 4.473520 CACCCCAGGCGGCTACAG 62.474 72.222 12.74 5.39 0.00 2.74
155 156 4.468689 GTCACCCCAGGCGGCTAC 62.469 72.222 12.74 0.36 0.00 3.58
166 167 4.729918 CTGGCCTGCTGGTCACCC 62.730 72.222 13.58 4.95 44.07 4.61
167 168 4.729918 CCTGGCCTGCTGGTCACC 62.730 72.222 13.58 5.33 44.07 4.02
168 169 2.983725 AAACCTGGCCTGCTGGTCAC 62.984 60.000 13.58 3.64 44.07 3.67
170 171 1.115326 AAAAACCTGGCCTGCTGGTC 61.115 55.000 7.39 7.39 38.74 4.02
171 172 1.075301 AAAAACCTGGCCTGCTGGT 60.075 52.632 11.69 4.27 35.29 4.00
172 173 3.875390 AAAAACCTGGCCTGCTGG 58.125 55.556 3.32 5.03 0.00 4.85
195 196 3.511146 CCTGGCCTGCTAATTCTCAAAAA 59.489 43.478 3.32 0.00 0.00 1.94
196 197 3.091545 CCTGGCCTGCTAATTCTCAAAA 58.908 45.455 3.32 0.00 0.00 2.44
197 198 2.621407 CCCTGGCCTGCTAATTCTCAAA 60.621 50.000 3.32 0.00 0.00 2.69
198 199 1.064463 CCCTGGCCTGCTAATTCTCAA 60.064 52.381 3.32 0.00 0.00 3.02
199 200 0.548031 CCCTGGCCTGCTAATTCTCA 59.452 55.000 3.32 0.00 0.00 3.27
200 201 0.548510 ACCCTGGCCTGCTAATTCTC 59.451 55.000 3.32 0.00 0.00 2.87
201 202 0.548510 GACCCTGGCCTGCTAATTCT 59.451 55.000 3.32 0.00 0.00 2.40
202 203 0.815615 CGACCCTGGCCTGCTAATTC 60.816 60.000 3.32 0.00 0.00 2.17
203 204 1.224592 CGACCCTGGCCTGCTAATT 59.775 57.895 3.32 0.00 0.00 1.40
204 205 1.689233 TCGACCCTGGCCTGCTAAT 60.689 57.895 3.32 0.00 0.00 1.73
205 206 2.284331 TCGACCCTGGCCTGCTAA 60.284 61.111 3.32 0.00 0.00 3.09
206 207 2.759973 CTCGACCCTGGCCTGCTA 60.760 66.667 3.32 0.00 0.00 3.49
207 208 4.704103 TCTCGACCCTGGCCTGCT 62.704 66.667 3.32 0.00 0.00 4.24
208 209 4.459089 GTCTCGACCCTGGCCTGC 62.459 72.222 3.32 0.00 0.00 4.85
209 210 4.135153 CGTCTCGACCCTGGCCTG 62.135 72.222 3.32 2.54 0.00 4.85
215 216 3.736224 TAGCCCCGTCTCGACCCT 61.736 66.667 0.00 0.00 0.00 4.34
216 217 3.525545 GTAGCCCCGTCTCGACCC 61.526 72.222 0.00 0.00 0.00 4.46
217 218 2.753043 TGTAGCCCCGTCTCGACC 60.753 66.667 0.00 0.00 0.00 4.79
218 219 2.267681 CTGTGTAGCCCCGTCTCGAC 62.268 65.000 0.00 0.00 0.00 4.20
219 220 2.034532 TGTGTAGCCCCGTCTCGA 59.965 61.111 0.00 0.00 0.00 4.04
220 221 2.490217 CTGTGTAGCCCCGTCTCG 59.510 66.667 0.00 0.00 0.00 4.04
221 222 2.184579 GCTGTGTAGCCCCGTCTC 59.815 66.667 0.00 0.00 44.33 3.36
247 248 4.756135 ACGCATTCGACTTTACCCTAAAAA 59.244 37.500 0.00 0.00 39.41 1.94
248 249 4.317488 ACGCATTCGACTTTACCCTAAAA 58.683 39.130 0.00 0.00 39.41 1.52
249 250 3.929094 ACGCATTCGACTTTACCCTAAA 58.071 40.909 0.00 0.00 39.41 1.85
250 251 3.598019 ACGCATTCGACTTTACCCTAA 57.402 42.857 0.00 0.00 39.41 2.69
251 252 4.924305 ATACGCATTCGACTTTACCCTA 57.076 40.909 0.00 0.00 39.41 3.53
252 253 3.814005 ATACGCATTCGACTTTACCCT 57.186 42.857 0.00 0.00 39.41 4.34
253 254 4.829808 GAAATACGCATTCGACTTTACCC 58.170 43.478 0.00 0.00 39.41 3.69
283 284 0.450184 ACACACGCACAACTTGAACC 59.550 50.000 0.00 0.00 0.00 3.62
299 303 3.737172 GCCGGGATGCACACACAC 61.737 66.667 2.18 0.00 0.00 3.82
302 306 4.277009 TTGGCCGGGATGCACACA 62.277 61.111 2.18 0.00 0.00 3.72
375 380 2.925162 GAAGCGGGGGATTCGGTGAG 62.925 65.000 0.00 0.00 38.39 3.51
388 393 1.222113 GAGGGAAGGAAGGAAGCGG 59.778 63.158 0.00 0.00 0.00 5.52
508 514 2.089201 TGGATCGTAGCTTCGTTCTCA 58.911 47.619 19.10 13.87 32.39 3.27
551 557 1.411612 GGTAGGATTACACGGTGGAGG 59.588 57.143 13.48 0.00 0.00 4.30
689 695 2.027625 GAAGTCTTGTCCCACGCGG 61.028 63.158 12.47 0.00 0.00 6.46
703 709 4.922067 GGGGGAGAGGGAAGAAGT 57.078 61.111 0.00 0.00 0.00 3.01
730 736 2.285743 AGGGGAACAGGAGAGGGC 60.286 66.667 0.00 0.00 0.00 5.19
1090 1096 3.554342 CCAGGCGGATCCAGAGGG 61.554 72.222 13.41 3.77 37.29 4.30
1275 1281 2.401766 GGGCATGGACGAGTGCTTG 61.402 63.158 6.32 6.32 41.04 4.01
1591 1752 3.368539 TCAACGCAACATTCGGTACATAC 59.631 43.478 0.00 0.00 0.00 2.39
1595 1756 1.796459 ACTCAACGCAACATTCGGTAC 59.204 47.619 0.00 0.00 0.00 3.34
1637 1798 7.431084 GTGTAATACCAATGCAAACCTATTTCG 59.569 37.037 0.00 0.00 0.00 3.46
1639 1800 8.128322 TGTGTAATACCAATGCAAACCTATTT 57.872 30.769 0.00 0.00 0.00 1.40
1665 1826 5.945191 TCATAAATGCATTCCTGACTGAACA 59.055 36.000 13.38 0.00 0.00 3.18
1804 1965 1.875576 GCGCCTAAGACATGCAGCTAT 60.876 52.381 0.00 0.00 0.00 2.97
1941 2102 5.830000 ATCTGCCCCTTACGAATTTAAAC 57.170 39.130 0.00 0.00 0.00 2.01
1971 2132 4.813027 CTGCACTGTGCTCCAATATTTTT 58.187 39.130 30.43 0.00 45.31 1.94
2057 2218 9.801873 AACCAAACTCCAAATGATATAATTTCG 57.198 29.630 0.00 0.00 0.00 3.46
2065 2226 4.837860 AGGCAAACCAAACTCCAAATGATA 59.162 37.500 0.00 0.00 39.06 2.15
2182 2343 6.036470 TGTTACGAACAACATGATGCAAAAA 58.964 32.000 0.00 0.00 38.72 1.94
2183 2344 5.582550 TGTTACGAACAACATGATGCAAAA 58.417 33.333 0.00 0.00 38.72 2.44
2256 2417 9.213799 GTTGGTATTTAATCTGAATGGCAAAAA 57.786 29.630 0.00 0.00 0.00 1.94
2321 2482 1.626654 ATCAAAGTGAACTCGCGGCG 61.627 55.000 17.70 17.70 0.00 6.46
2426 2601 3.820467 CAGGCAACAAGTTCATAACCTCA 59.180 43.478 0.00 0.00 41.41 3.86
2454 2629 6.767902 GCCTAATCACAAGAGATCCATGTAAA 59.232 38.462 0.00 0.00 0.00 2.01
2618 2794 1.147153 GGCTGAGATGTAGGCACCC 59.853 63.158 0.00 0.00 40.17 4.61
2965 3141 1.447643 GGGCAGACTGTGACTGTGT 59.552 57.895 3.99 0.00 37.64 3.72
3219 3395 1.447643 GGTGGAGTGCCGCAGATAT 59.552 57.895 0.00 0.00 46.75 1.63
3260 3436 9.790344 ATTCTTCTAATTCATCCATCGAAGAAT 57.210 29.630 14.91 14.91 44.69 2.40
3657 3833 0.545309 TAGCCCTCTCCACAGCTTGT 60.545 55.000 0.00 0.00 36.79 3.16
3737 3913 2.032620 CAGCCCTCTCATTACGTAGGT 58.967 52.381 0.00 0.00 0.00 3.08
4192 4368 7.973944 GCATTAAACGTAGGATCCTGAAATTTT 59.026 33.333 25.28 16.56 0.00 1.82
4539 5014 7.444299 ACTATGAACAGCAACAAATTTTGGAT 58.556 30.769 13.42 0.00 34.12 3.41
4540 5015 6.815089 ACTATGAACAGCAACAAATTTTGGA 58.185 32.000 13.42 0.00 34.12 3.53
4731 5206 7.606858 AAAATCGGCTCATGTATCATGATAG 57.393 36.000 15.83 6.85 0.00 2.08
4733 5208 6.713903 AGAAAAATCGGCTCATGTATCATGAT 59.286 34.615 13.81 13.81 0.00 2.45
5095 5580 7.545362 AAGCACATATGTAGCTTCTGTTTAG 57.455 36.000 26.30 7.75 44.67 1.85
5175 5664 8.952278 ACGTATTGCAAGAAAATTACAGGATAA 58.048 29.630 4.94 0.00 0.00 1.75
5176 5665 8.500753 ACGTATTGCAAGAAAATTACAGGATA 57.499 30.769 4.94 0.00 0.00 2.59
5177 5666 7.391148 ACGTATTGCAAGAAAATTACAGGAT 57.609 32.000 4.94 0.00 0.00 3.24
5178 5667 6.811253 ACGTATTGCAAGAAAATTACAGGA 57.189 33.333 4.94 0.00 0.00 3.86
5179 5668 9.009327 CATAACGTATTGCAAGAAAATTACAGG 57.991 33.333 4.94 0.00 0.00 4.00
5180 5669 9.009327 CCATAACGTATTGCAAGAAAATTACAG 57.991 33.333 4.94 1.44 0.00 2.74
5181 5670 8.516234 ACCATAACGTATTGCAAGAAAATTACA 58.484 29.630 4.94 0.00 0.00 2.41
5184 5673 7.598278 TGACCATAACGTATTGCAAGAAAATT 58.402 30.769 4.94 0.00 0.00 1.82
5185 5674 7.151999 TGACCATAACGTATTGCAAGAAAAT 57.848 32.000 4.94 0.00 0.00 1.82
5186 5675 6.561737 TGACCATAACGTATTGCAAGAAAA 57.438 33.333 4.94 0.00 0.00 2.29
5187 5676 6.017026 TGTTGACCATAACGTATTGCAAGAAA 60.017 34.615 4.94 0.00 33.28 2.52
5188 5677 5.470437 TGTTGACCATAACGTATTGCAAGAA 59.530 36.000 4.94 0.00 33.28 2.52
5189 5678 4.998033 TGTTGACCATAACGTATTGCAAGA 59.002 37.500 4.94 0.00 33.28 3.02
5190 5679 5.086058 GTGTTGACCATAACGTATTGCAAG 58.914 41.667 4.94 0.00 33.28 4.01
5375 5868 8.154856 GGACAGCTTGGGAATATAGTACATTTA 58.845 37.037 0.00 0.00 0.00 1.40
5394 5887 2.093235 GCCTAAGTCAATGAGGACAGCT 60.093 50.000 0.00 0.00 40.29 4.24
5395 5888 2.093235 AGCCTAAGTCAATGAGGACAGC 60.093 50.000 0.00 0.00 40.29 4.40
5396 5889 3.902881 AGCCTAAGTCAATGAGGACAG 57.097 47.619 0.00 0.00 40.29 3.51
5431 5924 0.467844 AGTGGAGTTGCATGCACCAA 60.468 50.000 25.27 8.23 42.00 3.67
5452 5945 2.601240 TGGTGGCCAAATGATGAGAA 57.399 45.000 7.24 0.00 0.00 2.87
5511 6004 3.312697 AGTTTTTCACAGAGCGAGGAAAC 59.687 43.478 0.00 0.00 0.00 2.78
5519 6012 4.787882 GCTTGTCTGAGTTTTTCACAGAGC 60.788 45.833 0.00 0.00 42.54 4.09
5639 6136 2.240667 CCCCCACCCATGATGAGATATC 59.759 54.545 0.00 0.00 0.00 1.63
5640 6137 2.281966 CCCCCACCCATGATGAGATAT 58.718 52.381 0.00 0.00 0.00 1.63
5641 6138 1.746157 CCCCCACCCATGATGAGATA 58.254 55.000 0.00 0.00 0.00 1.98
5808 6305 7.779798 AGAAGCTTAATGATAAATAAGTGGCCA 59.220 33.333 0.00 0.00 32.82 5.36
5837 6334 6.516718 CAAGATTGTCGTGGGAATATACTCT 58.483 40.000 0.00 0.00 0.00 3.24
5851 6348 0.179215 GGAAGCGTGCAAGATTGTCG 60.179 55.000 8.12 0.00 0.00 4.35
6054 6553 4.849813 TCACTGGTGATTCTGATTCCAT 57.150 40.909 0.00 0.00 34.14 3.41
6131 6630 8.155510 TCCCTTTTCAGATTCATGATATCTCAG 58.844 37.037 13.97 7.61 34.12 3.35
6132 6631 8.037723 TCCCTTTTCAGATTCATGATATCTCA 57.962 34.615 13.97 3.44 35.41 3.27
6153 6652 1.427368 TGGCACACCAGTTTTATCCCT 59.573 47.619 0.00 0.00 42.67 4.20
6165 6664 1.040339 TGTCCACCTTTTGGCACACC 61.040 55.000 0.00 0.00 46.47 4.16
6191 6690 8.547481 TGACCACAGTTCCTCTATTAATCATA 57.453 34.615 0.00 0.00 0.00 2.15
6361 6860 1.398041 CATGTACCGGCACACAATGAG 59.602 52.381 10.38 0.00 0.00 2.90
6540 7040 2.971452 GACCACCCTCGTCCACTC 59.029 66.667 0.00 0.00 0.00 3.51
6599 7099 1.676967 CTTCCAGGTTCCAGCTGCC 60.677 63.158 8.66 4.22 42.05 4.85
6665 7197 4.113354 CAGTATCAGAGCCTACGTTTTCC 58.887 47.826 0.00 0.00 0.00 3.13
6686 7218 2.268762 TTGGTGCATGCAACTCTACA 57.731 45.000 34.07 13.05 34.17 2.74
6717 7249 7.113437 TGTACTGCAATTGGTATTAGGCTTTA 58.887 34.615 7.72 0.00 0.00 1.85
6782 7314 5.047872 TGCAGATCACATTGTTGCTACAAAT 60.048 36.000 17.40 6.72 46.62 2.32
6927 7461 6.728632 TCCACATCACCTATATGGCTGTATTA 59.271 38.462 0.00 0.00 40.22 0.98
6943 7477 3.806380 AGAGAGATTGCATCCACATCAC 58.194 45.455 0.00 0.00 0.00 3.06
7070 7614 7.805071 GCAATTCCATGTGCATAATTAGTAGTC 59.195 37.037 1.41 0.00 40.58 2.59
7147 7693 6.206829 AGCCAAAGTACCTGTTCAGAAATAAC 59.793 38.462 1.00 0.00 0.00 1.89
7156 7702 5.122396 CACATTCTAGCCAAAGTACCTGTTC 59.878 44.000 0.00 0.00 0.00 3.18
7172 7718 1.134007 CAGGCTGCCATCCACATTCTA 60.134 52.381 22.65 0.00 0.00 2.10
7407 7955 5.361571 TGCAGGGTTTTCGTCTAGTATATGA 59.638 40.000 0.00 0.00 0.00 2.15
7575 8161 5.348986 GTTATTTCTGCTCTGGTGTATCGA 58.651 41.667 0.00 0.00 0.00 3.59
7600 8186 8.986929 AATAAAAATGTTGGGGAACATCAAAA 57.013 26.923 0.00 0.00 42.13 2.44
7721 8307 1.666700 CTTCTCCTCGAGTACCTCACG 59.333 57.143 12.31 0.00 0.00 4.35
7745 8331 2.203015 GTATGATGCGCGGTGGGT 60.203 61.111 8.83 0.00 0.00 4.51
7771 8358 4.069869 TTGAGCACCTCAAGCAGC 57.930 55.556 3.69 0.00 44.27 5.25
7838 8425 2.160417 GGGCTTTCACTTGATCACTTCG 59.840 50.000 0.00 0.00 0.00 3.79
7868 8455 9.739786 GCAAACAGCAATACAATAACAAATAAC 57.260 29.630 0.00 0.00 44.79 1.89
8199 8786 4.329545 GGCACGGCTCCAACTCCA 62.330 66.667 0.00 0.00 0.00 3.86
8231 8818 8.058667 TCAACTTTATACAGAATCGTACAGGA 57.941 34.615 0.00 0.00 0.00 3.86
8260 8848 3.006859 GCAAACCAGCTACCCAAAATTCT 59.993 43.478 0.00 0.00 0.00 2.40
8293 8881 3.118298 ACAAGGAAACCAAATGCTTGCTT 60.118 39.130 7.55 0.00 46.44 3.91
8298 8886 3.308401 AGGAACAAGGAAACCAAATGCT 58.692 40.909 0.00 0.00 0.00 3.79
8301 8889 2.890945 CCGAGGAACAAGGAAACCAAAT 59.109 45.455 0.00 0.00 0.00 2.32
8350 8938 5.048083 GGCGGATCTTGGCATAATAATTCAA 60.048 40.000 7.08 0.00 0.00 2.69
8366 8954 1.332889 TGATGACAGCTGGCGGATCT 61.333 55.000 19.93 0.00 0.00 2.75
8372 8960 3.065925 GGTTATTTCTGATGACAGCTGGC 59.934 47.826 19.93 17.40 43.17 4.85
8393 8981 7.978414 TGTTTATATGTACCATGTTGCATTTGG 59.022 33.333 0.00 8.17 36.56 3.28
8416 9004 6.764308 AGCATGCTGACATATTTAAGTGTT 57.236 33.333 21.98 0.00 33.67 3.32
8417 9005 7.716560 TCATAGCATGCTGACATATTTAAGTGT 59.283 33.333 30.42 0.00 33.67 3.55
8418 9006 8.091385 TCATAGCATGCTGACATATTTAAGTG 57.909 34.615 30.42 3.94 33.67 3.16
8419 9007 8.859236 ATCATAGCATGCTGACATATTTAAGT 57.141 30.769 30.42 0.60 33.67 2.24
8422 9010 9.723601 TGTTATCATAGCATGCTGACATATTTA 57.276 29.630 30.42 7.00 33.67 1.40
8423 9011 8.625786 TGTTATCATAGCATGCTGACATATTT 57.374 30.769 30.42 7.04 33.67 1.40
8424 9012 7.881751 ACTGTTATCATAGCATGCTGACATATT 59.118 33.333 30.42 7.74 33.67 1.28
8425 9013 7.392418 ACTGTTATCATAGCATGCTGACATAT 58.608 34.615 30.42 12.39 33.67 1.78
8426 9014 6.762333 ACTGTTATCATAGCATGCTGACATA 58.238 36.000 30.42 18.08 33.67 2.29
8427 9015 5.618236 ACTGTTATCATAGCATGCTGACAT 58.382 37.500 30.42 19.05 36.79 3.06
8428 9016 5.027293 ACTGTTATCATAGCATGCTGACA 57.973 39.130 30.42 20.15 0.00 3.58
8429 9017 6.219473 AGTACTGTTATCATAGCATGCTGAC 58.781 40.000 30.42 17.11 0.00 3.51
8430 9018 6.410942 AGTACTGTTATCATAGCATGCTGA 57.589 37.500 30.42 20.56 0.00 4.26
8431 9019 6.146837 GGAAGTACTGTTATCATAGCATGCTG 59.853 42.308 30.42 15.55 0.00 4.41
8432 9020 6.042552 AGGAAGTACTGTTATCATAGCATGCT 59.957 38.462 25.99 25.99 0.00 3.79
8433 9021 6.226787 AGGAAGTACTGTTATCATAGCATGC 58.773 40.000 10.51 10.51 0.00 4.06
8434 9022 9.764363 TTTAGGAAGTACTGTTATCATAGCATG 57.236 33.333 0.00 0.00 0.00 4.06
8435 9023 9.765795 GTTTAGGAAGTACTGTTATCATAGCAT 57.234 33.333 0.00 0.00 0.00 3.79
8436 9024 8.978472 AGTTTAGGAAGTACTGTTATCATAGCA 58.022 33.333 0.00 0.00 0.00 3.49
8437 9025 9.819267 AAGTTTAGGAAGTACTGTTATCATAGC 57.181 33.333 0.00 0.00 0.00 2.97
8441 9029 8.780249 GCAAAAGTTTAGGAAGTACTGTTATCA 58.220 33.333 0.00 0.00 0.00 2.15
8442 9030 9.000486 AGCAAAAGTTTAGGAAGTACTGTTATC 58.000 33.333 0.00 0.00 0.00 1.75
8443 9031 8.919777 AGCAAAAGTTTAGGAAGTACTGTTAT 57.080 30.769 0.00 0.00 0.00 1.89
8444 9032 8.741603 AAGCAAAAGTTTAGGAAGTACTGTTA 57.258 30.769 0.00 0.00 0.00 2.41
8445 9033 7.640597 AAGCAAAAGTTTAGGAAGTACTGTT 57.359 32.000 0.00 0.00 0.00 3.16
8446 9034 7.201794 GGAAAGCAAAAGTTTAGGAAGTACTGT 60.202 37.037 0.00 0.00 0.00 3.55
8447 9035 7.139392 GGAAAGCAAAAGTTTAGGAAGTACTG 58.861 38.462 0.00 0.00 0.00 2.74
8448 9036 6.264744 GGGAAAGCAAAAGTTTAGGAAGTACT 59.735 38.462 0.00 0.00 0.00 2.73
8449 9037 6.444633 GGGAAAGCAAAAGTTTAGGAAGTAC 58.555 40.000 0.00 0.00 0.00 2.73
8450 9038 5.239963 CGGGAAAGCAAAAGTTTAGGAAGTA 59.760 40.000 0.00 0.00 0.00 2.24
8451 9039 4.037565 CGGGAAAGCAAAAGTTTAGGAAGT 59.962 41.667 0.00 0.00 0.00 3.01
8452 9040 4.037565 ACGGGAAAGCAAAAGTTTAGGAAG 59.962 41.667 0.00 0.00 0.00 3.46
8453 9041 3.955551 ACGGGAAAGCAAAAGTTTAGGAA 59.044 39.130 0.00 0.00 0.00 3.36
8454 9042 3.558033 ACGGGAAAGCAAAAGTTTAGGA 58.442 40.909 0.00 0.00 0.00 2.94
8455 9043 4.316205 AACGGGAAAGCAAAAGTTTAGG 57.684 40.909 0.00 0.00 0.00 2.69
8456 9044 7.490079 ACTTAAAACGGGAAAGCAAAAGTTTAG 59.510 33.333 0.00 0.00 32.41 1.85
8457 9045 7.321908 ACTTAAAACGGGAAAGCAAAAGTTTA 58.678 30.769 0.00 0.00 32.41 2.01
8458 9046 6.167685 ACTTAAAACGGGAAAGCAAAAGTTT 58.832 32.000 0.00 0.00 33.86 2.66
8459 9047 5.726397 ACTTAAAACGGGAAAGCAAAAGTT 58.274 33.333 0.00 0.00 0.00 2.66
8460 9048 5.126545 AGACTTAAAACGGGAAAGCAAAAGT 59.873 36.000 0.00 0.00 0.00 2.66
8461 9049 5.588240 AGACTTAAAACGGGAAAGCAAAAG 58.412 37.500 0.00 0.00 0.00 2.27
8462 9050 5.125739 TGAGACTTAAAACGGGAAAGCAAAA 59.874 36.000 0.00 0.00 0.00 2.44
8463 9051 4.641094 TGAGACTTAAAACGGGAAAGCAAA 59.359 37.500 0.00 0.00 0.00 3.68
8464 9052 4.200874 TGAGACTTAAAACGGGAAAGCAA 58.799 39.130 0.00 0.00 0.00 3.91
8465 9053 3.811083 TGAGACTTAAAACGGGAAAGCA 58.189 40.909 0.00 0.00 0.00 3.91
8466 9054 5.372547 AATGAGACTTAAAACGGGAAAGC 57.627 39.130 0.00 0.00 0.00 3.51
8467 9055 7.203255 AGAAATGAGACTTAAAACGGGAAAG 57.797 36.000 0.00 0.00 0.00 2.62
8468 9056 8.857694 ATAGAAATGAGACTTAAAACGGGAAA 57.142 30.769 0.00 0.00 0.00 3.13
8469 9057 8.726988 CAATAGAAATGAGACTTAAAACGGGAA 58.273 33.333 0.00 0.00 0.00 3.97
8470 9058 7.148306 GCAATAGAAATGAGACTTAAAACGGGA 60.148 37.037 0.00 0.00 0.00 5.14
8471 9059 6.967199 GCAATAGAAATGAGACTTAAAACGGG 59.033 38.462 0.00 0.00 0.00 5.28
8472 9060 7.752695 AGCAATAGAAATGAGACTTAAAACGG 58.247 34.615 0.00 0.00 0.00 4.44
8473 9061 9.267096 GAAGCAATAGAAATGAGACTTAAAACG 57.733 33.333 0.00 0.00 0.00 3.60
8479 9067 9.842775 TGATATGAAGCAATAGAAATGAGACTT 57.157 29.630 0.00 0.00 0.00 3.01
8480 9068 9.270640 GTGATATGAAGCAATAGAAATGAGACT 57.729 33.333 0.00 0.00 0.00 3.24
8481 9069 9.049523 TGTGATATGAAGCAATAGAAATGAGAC 57.950 33.333 0.00 0.00 0.00 3.36
8482 9070 9.049523 GTGTGATATGAAGCAATAGAAATGAGA 57.950 33.333 0.00 0.00 0.00 3.27
8483 9071 8.008279 CGTGTGATATGAAGCAATAGAAATGAG 58.992 37.037 0.00 0.00 0.00 2.90
8484 9072 7.518848 GCGTGTGATATGAAGCAATAGAAATGA 60.519 37.037 0.00 0.00 0.00 2.57
8485 9073 6.576313 GCGTGTGATATGAAGCAATAGAAATG 59.424 38.462 0.00 0.00 0.00 2.32
8486 9074 6.484643 AGCGTGTGATATGAAGCAATAGAAAT 59.515 34.615 0.00 0.00 0.00 2.17
8487 9075 5.817296 AGCGTGTGATATGAAGCAATAGAAA 59.183 36.000 0.00 0.00 0.00 2.52
8488 9076 5.359756 AGCGTGTGATATGAAGCAATAGAA 58.640 37.500 0.00 0.00 0.00 2.10
8489 9077 4.948847 AGCGTGTGATATGAAGCAATAGA 58.051 39.130 0.00 0.00 0.00 1.98
8490 9078 4.746611 TGAGCGTGTGATATGAAGCAATAG 59.253 41.667 0.00 0.00 0.00 1.73
8491 9079 4.692228 TGAGCGTGTGATATGAAGCAATA 58.308 39.130 0.00 0.00 0.00 1.90
8492 9080 3.534554 TGAGCGTGTGATATGAAGCAAT 58.465 40.909 0.00 0.00 0.00 3.56
8493 9081 2.931969 CTGAGCGTGTGATATGAAGCAA 59.068 45.455 0.00 0.00 0.00 3.91
8494 9082 2.166254 TCTGAGCGTGTGATATGAAGCA 59.834 45.455 0.00 0.00 0.00 3.91
8495 9083 2.814269 TCTGAGCGTGTGATATGAAGC 58.186 47.619 0.00 0.00 0.00 3.86
8496 9084 6.865205 TCAATATCTGAGCGTGTGATATGAAG 59.135 38.462 0.00 0.00 34.71 3.02
8497 9085 6.748132 TCAATATCTGAGCGTGTGATATGAA 58.252 36.000 0.00 0.00 34.71 2.57
8498 9086 6.331369 TCAATATCTGAGCGTGTGATATGA 57.669 37.500 0.00 0.00 34.71 2.15
8499 9087 6.629182 CTCAATATCTGAGCGTGTGATATG 57.371 41.667 0.00 0.00 45.11 1.78
8511 9099 8.929260 ATGATTTAATGCACCTCAATATCTGA 57.071 30.769 0.00 0.00 0.00 3.27
8512 9100 9.406828 CAATGATTTAATGCACCTCAATATCTG 57.593 33.333 0.00 0.00 0.00 2.90
8513 9101 8.086522 GCAATGATTTAATGCACCTCAATATCT 58.913 33.333 0.00 0.00 39.81 1.98
8514 9102 7.868922 TGCAATGATTTAATGCACCTCAATATC 59.131 33.333 0.00 0.00 44.52 1.63
8515 9103 7.728148 TGCAATGATTTAATGCACCTCAATAT 58.272 30.769 0.00 0.00 44.52 1.28
8516 9104 7.110043 TGCAATGATTTAATGCACCTCAATA 57.890 32.000 0.00 0.00 44.52 1.90
8517 9105 5.979993 TGCAATGATTTAATGCACCTCAAT 58.020 33.333 0.00 0.00 44.52 2.57
8518 9106 5.402997 TGCAATGATTTAATGCACCTCAA 57.597 34.783 0.00 0.00 44.52 3.02
8525 9113 7.205297 AGTCCTTGTATGCAATGATTTAATGC 58.795 34.615 4.95 0.00 40.45 3.56
8571 9159 8.352201 GCATGCATGACCAATAAATAACTAAGA 58.648 33.333 30.64 0.00 0.00 2.10
8572 9160 8.136800 TGCATGCATGACCAATAAATAACTAAG 58.863 33.333 30.64 0.00 0.00 2.18
8573 9161 8.005192 TGCATGCATGACCAATAAATAACTAA 57.995 30.769 30.64 0.00 0.00 2.24
8574 9162 7.579761 TGCATGCATGACCAATAAATAACTA 57.420 32.000 30.64 0.00 0.00 2.24
8575 9163 6.468333 TGCATGCATGACCAATAAATAACT 57.532 33.333 30.64 0.00 0.00 2.24
8576 9164 7.718272 AATGCATGCATGACCAATAAATAAC 57.282 32.000 32.79 7.94 36.68 1.89
8577 9165 8.419442 TGTAATGCATGCATGACCAATAAATAA 58.581 29.630 35.24 17.36 37.06 1.40
8578 9166 7.949434 TGTAATGCATGCATGACCAATAAATA 58.051 30.769 35.24 17.98 37.06 1.40
8579 9167 6.818233 TGTAATGCATGCATGACCAATAAAT 58.182 32.000 35.24 19.19 37.06 1.40
8580 9168 6.218108 TGTAATGCATGCATGACCAATAAA 57.782 33.333 35.24 19.24 37.06 1.40
8581 9169 5.848833 TGTAATGCATGCATGACCAATAA 57.151 34.783 35.24 19.86 37.06 1.40
8582 9170 5.848833 TTGTAATGCATGCATGACCAATA 57.151 34.783 35.24 20.19 37.06 1.90
8583 9171 4.739587 TTGTAATGCATGCATGACCAAT 57.260 36.364 35.24 21.73 37.06 3.16
8584 9172 4.739587 ATTGTAATGCATGCATGACCAA 57.260 36.364 35.24 31.12 37.06 3.67
8585 9173 4.739587 AATTGTAATGCATGCATGACCA 57.260 36.364 35.24 28.53 37.06 4.02
8586 9174 7.112528 CATTAATTGTAATGCATGCATGACC 57.887 36.000 35.24 24.64 40.06 4.02
8609 9197 4.510711 CAAACTATTGTGTTTGCCAATGCA 59.489 37.500 7.10 0.00 46.38 3.96
8610 9198 5.021120 CAAACTATTGTGTTTGCCAATGC 57.979 39.130 7.10 0.00 46.38 3.56
8620 9208 9.410556 GCACTCATTTTTATCAAACTATTGTGT 57.589 29.630 0.00 0.00 37.79 3.72
8621 9209 9.409312 TGCACTCATTTTTATCAAACTATTGTG 57.591 29.630 0.00 0.00 37.79 3.33
8639 9227 8.616076 GCAGAAGTACTTTATTAATGCACTCAT 58.384 33.333 10.02 0.00 33.53 2.90
8640 9228 7.606073 TGCAGAAGTACTTTATTAATGCACTCA 59.394 33.333 10.02 0.00 36.33 3.41
8641 9229 7.974675 TGCAGAAGTACTTTATTAATGCACTC 58.025 34.615 10.02 0.00 36.33 3.51
8642 9230 7.921786 TGCAGAAGTACTTTATTAATGCACT 57.078 32.000 10.02 0.00 36.33 4.40
8643 9231 8.964420 TTTGCAGAAGTACTTTATTAATGCAC 57.036 30.769 19.72 3.41 40.52 4.57
8644 9232 8.792633 ACTTTGCAGAAGTACTTTATTAATGCA 58.207 29.630 10.02 15.11 39.20 3.96
8661 9249 9.474313 AGTGGGATAATTTTAATACTTTGCAGA 57.526 29.630 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.