Multiple sequence alignment - TraesCS5B01G096600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G096600 chr5B 100.000 2624 0 0 1 2624 127771354 127773977 0.000000e+00 4846.0
1 TraesCS5B01G096600 chr5B 98.437 1855 26 1 773 2624 708907796 708905942 0.000000e+00 3262.0
2 TraesCS5B01G096600 chr5B 100.000 30 0 0 469 498 127771792 127771821 3.650000e-04 56.5
3 TraesCS5B01G096600 chr5B 100.000 30 0 0 439 468 127771822 127771851 3.650000e-04 56.5
4 TraesCS5B01G096600 chrUn 98.920 1852 16 2 777 2624 194117160 194115309 0.000000e+00 3306.0
5 TraesCS5B01G096600 chr6B 98.654 1858 21 2 771 2624 716403997 716405854 0.000000e+00 3290.0
6 TraesCS5B01G096600 chr6B 98.548 1859 24 3 768 2624 37761972 37760115 0.000000e+00 3280.0
7 TraesCS5B01G096600 chr3B 98.599 1856 21 4 774 2624 766104295 766106150 0.000000e+00 3278.0
8 TraesCS5B01G096600 chr3B 98.544 1855 23 2 774 2624 741973406 741975260 0.000000e+00 3273.0
9 TraesCS5B01G096600 chr2B 98.491 1855 24 2 774 2624 497040148 497042002 0.000000e+00 3267.0
10 TraesCS5B01G096600 chr1B 98.333 1860 23 5 769 2624 560184931 560186786 0.000000e+00 3256.0
11 TraesCS5B01G096600 chr4B 98.121 1863 27 3 766 2624 575730040 575731898 0.000000e+00 3240.0
12 TraesCS5B01G096600 chr5D 92.929 693 17 5 1 688 116026914 116027579 0.000000e+00 979.0
13 TraesCS5B01G096600 chr5D 94.937 79 4 0 693 771 116027655 116027733 9.860000e-25 124.0
14 TraesCS5B01G096600 chr5A 91.358 486 26 5 1 473 123389872 123390354 0.000000e+00 651.0
15 TraesCS5B01G096600 chr5A 90.667 225 15 4 469 688 123390320 123390543 7.100000e-76 294.0
16 TraesCS5B01G096600 chr5A 96.203 79 3 0 693 771 123390619 123390697 2.120000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G096600 chr5B 127771354 127773977 2623 False 1653.000000 4846 100.000000 1 2624 3 chr5B.!!$F1 2623
1 TraesCS5B01G096600 chr5B 708905942 708907796 1854 True 3262.000000 3262 98.437000 773 2624 1 chr5B.!!$R1 1851
2 TraesCS5B01G096600 chrUn 194115309 194117160 1851 True 3306.000000 3306 98.920000 777 2624 1 chrUn.!!$R1 1847
3 TraesCS5B01G096600 chr6B 716403997 716405854 1857 False 3290.000000 3290 98.654000 771 2624 1 chr6B.!!$F1 1853
4 TraesCS5B01G096600 chr6B 37760115 37761972 1857 True 3280.000000 3280 98.548000 768 2624 1 chr6B.!!$R1 1856
5 TraesCS5B01G096600 chr3B 766104295 766106150 1855 False 3278.000000 3278 98.599000 774 2624 1 chr3B.!!$F2 1850
6 TraesCS5B01G096600 chr3B 741973406 741975260 1854 False 3273.000000 3273 98.544000 774 2624 1 chr3B.!!$F1 1850
7 TraesCS5B01G096600 chr2B 497040148 497042002 1854 False 3267.000000 3267 98.491000 774 2624 1 chr2B.!!$F1 1850
8 TraesCS5B01G096600 chr1B 560184931 560186786 1855 False 3256.000000 3256 98.333000 769 2624 1 chr1B.!!$F1 1855
9 TraesCS5B01G096600 chr4B 575730040 575731898 1858 False 3240.000000 3240 98.121000 766 2624 1 chr4B.!!$F1 1858
10 TraesCS5B01G096600 chr5D 116026914 116027733 819 False 551.500000 979 93.933000 1 771 2 chr5D.!!$F1 770
11 TraesCS5B01G096600 chr5A 123389872 123390697 825 False 358.333333 651 92.742667 1 771 3 chr5A.!!$F1 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 305 0.034059 CTTGACGAGGGTGCAAGAGT 59.966 55.0 0.00 0.0 41.03 3.24 F
718 730 0.035056 GGTGCCAGACTGCCACTAAT 60.035 55.0 15.52 0.0 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1600 1802 3.974757 ATAGCTACCGCCGCCGTC 61.975 66.667 0.00 0.0 36.60 4.79 R
1952 2154 4.332819 GCAGTACCGAAATATTTCAGTGCT 59.667 41.667 25.27 23.9 39.86 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 171 2.029728 CAGTCAGACGAATGGCGATTTC 59.970 50.000 0.00 0.00 44.57 2.17
219 231 4.675671 CGGCTTAGATCGATAATGAGGTCC 60.676 50.000 0.00 0.00 0.00 4.46
239 251 1.398451 CGTGCCTTTGTAAACGCAGAG 60.398 52.381 2.08 0.00 32.13 3.35
245 257 2.472695 TTGTAAACGCAGAGCATCCT 57.527 45.000 0.00 0.00 33.66 3.24
246 258 2.472695 TGTAAACGCAGAGCATCCTT 57.527 45.000 0.00 0.00 33.66 3.36
247 259 2.076100 TGTAAACGCAGAGCATCCTTG 58.924 47.619 0.00 0.00 33.66 3.61
248 260 2.289382 TGTAAACGCAGAGCATCCTTGA 60.289 45.455 0.00 0.00 33.66 3.02
249 261 1.896220 AAACGCAGAGCATCCTTGAA 58.104 45.000 0.00 0.00 33.66 2.69
250 262 1.160137 AACGCAGAGCATCCTTGAAC 58.840 50.000 0.00 0.00 33.66 3.18
251 263 0.322975 ACGCAGAGCATCCTTGAACT 59.677 50.000 0.00 0.00 33.66 3.01
252 264 0.725686 CGCAGAGCATCCTTGAACTG 59.274 55.000 0.00 0.00 33.66 3.16
253 265 1.093159 GCAGAGCATCCTTGAACTGG 58.907 55.000 0.00 0.00 33.66 4.00
254 266 1.747709 CAGAGCATCCTTGAACTGGG 58.252 55.000 0.00 0.00 33.66 4.45
255 267 1.280133 CAGAGCATCCTTGAACTGGGA 59.720 52.381 0.00 0.00 33.66 4.37
256 268 1.558756 AGAGCATCCTTGAACTGGGAG 59.441 52.381 0.00 0.00 34.89 4.30
257 269 0.622665 AGCATCCTTGAACTGGGAGG 59.377 55.000 0.00 0.00 36.60 4.30
258 270 0.620556 GCATCCTTGAACTGGGAGGA 59.379 55.000 0.00 0.00 43.29 3.71
260 272 2.439507 GCATCCTTGAACTGGGAGGATA 59.560 50.000 3.97 0.00 46.01 2.59
261 273 3.073650 GCATCCTTGAACTGGGAGGATAT 59.926 47.826 3.97 0.00 46.01 1.63
262 274 4.287067 GCATCCTTGAACTGGGAGGATATA 59.713 45.833 3.97 0.00 46.01 0.86
263 275 5.221925 GCATCCTTGAACTGGGAGGATATAA 60.222 44.000 3.97 0.00 46.01 0.98
264 276 6.691491 GCATCCTTGAACTGGGAGGATATAAA 60.691 42.308 3.97 0.00 46.01 1.40
265 277 6.500589 TCCTTGAACTGGGAGGATATAAAG 57.499 41.667 0.00 0.00 34.74 1.85
266 278 5.066593 CCTTGAACTGGGAGGATATAAAGC 58.933 45.833 0.00 0.00 32.11 3.51
267 279 5.163152 CCTTGAACTGGGAGGATATAAAGCT 60.163 44.000 0.00 0.00 32.11 3.74
268 280 5.552870 TGAACTGGGAGGATATAAAGCTC 57.447 43.478 0.00 0.00 0.00 4.09
269 281 4.039245 TGAACTGGGAGGATATAAAGCTCG 59.961 45.833 0.00 0.00 0.00 5.03
270 282 3.845860 ACTGGGAGGATATAAAGCTCGA 58.154 45.455 0.00 0.00 0.00 4.04
271 283 3.829601 ACTGGGAGGATATAAAGCTCGAG 59.170 47.826 8.45 8.45 0.00 4.04
272 284 4.082845 CTGGGAGGATATAAAGCTCGAGA 58.917 47.826 18.75 0.00 0.00 4.04
273 285 3.827302 TGGGAGGATATAAAGCTCGAGAC 59.173 47.826 18.75 7.74 0.00 3.36
274 286 3.193903 GGGAGGATATAAAGCTCGAGACC 59.806 52.174 18.75 0.00 0.00 3.85
275 287 4.083565 GGAGGATATAAAGCTCGAGACCT 58.916 47.826 18.75 10.08 0.00 3.85
276 288 4.525100 GGAGGATATAAAGCTCGAGACCTT 59.475 45.833 18.75 8.12 0.00 3.50
277 289 5.461032 AGGATATAAAGCTCGAGACCTTG 57.539 43.478 18.75 0.00 0.00 3.61
278 290 5.141182 AGGATATAAAGCTCGAGACCTTGA 58.859 41.667 18.75 4.35 0.00 3.02
279 291 5.010213 AGGATATAAAGCTCGAGACCTTGAC 59.990 44.000 18.75 0.00 0.00 3.18
280 292 2.631418 TAAAGCTCGAGACCTTGACG 57.369 50.000 18.75 0.00 0.00 4.35
281 293 0.959553 AAAGCTCGAGACCTTGACGA 59.040 50.000 18.75 0.00 34.90 4.20
290 302 3.972227 CCTTGACGAGGGTGCAAG 58.028 61.111 0.00 0.00 42.26 4.01
291 303 1.371183 CCTTGACGAGGGTGCAAGA 59.629 57.895 0.00 0.00 42.26 3.02
292 304 0.671781 CCTTGACGAGGGTGCAAGAG 60.672 60.000 0.00 0.00 42.26 2.85
293 305 0.034059 CTTGACGAGGGTGCAAGAGT 59.966 55.000 0.00 0.00 41.03 3.24
294 306 0.468226 TTGACGAGGGTGCAAGAGTT 59.532 50.000 0.00 0.00 0.00 3.01
295 307 0.249868 TGACGAGGGTGCAAGAGTTG 60.250 55.000 0.00 0.00 0.00 3.16
296 308 0.951040 GACGAGGGTGCAAGAGTTGG 60.951 60.000 0.00 0.00 0.00 3.77
297 309 1.071471 CGAGGGTGCAAGAGTTGGT 59.929 57.895 0.00 0.00 0.00 3.67
298 310 0.535102 CGAGGGTGCAAGAGTTGGTT 60.535 55.000 0.00 0.00 0.00 3.67
299 311 0.954452 GAGGGTGCAAGAGTTGGTTG 59.046 55.000 0.00 0.00 0.00 3.77
300 312 0.550914 AGGGTGCAAGAGTTGGTTGA 59.449 50.000 0.00 0.00 0.00 3.18
301 313 1.145738 AGGGTGCAAGAGTTGGTTGAT 59.854 47.619 0.00 0.00 0.00 2.57
302 314 1.541588 GGGTGCAAGAGTTGGTTGATC 59.458 52.381 0.00 0.00 0.00 2.92
303 315 2.508526 GGTGCAAGAGTTGGTTGATCT 58.491 47.619 0.00 0.00 0.00 2.75
304 316 2.227388 GGTGCAAGAGTTGGTTGATCTG 59.773 50.000 0.00 0.00 0.00 2.90
305 317 1.881973 TGCAAGAGTTGGTTGATCTGC 59.118 47.619 0.00 0.00 0.00 4.26
306 318 1.135859 GCAAGAGTTGGTTGATCTGCG 60.136 52.381 0.00 0.00 0.00 5.18
307 319 2.146342 CAAGAGTTGGTTGATCTGCGT 58.854 47.619 0.00 0.00 0.00 5.24
308 320 2.086054 AGAGTTGGTTGATCTGCGTC 57.914 50.000 0.00 0.00 0.00 5.19
309 321 1.079503 GAGTTGGTTGATCTGCGTCC 58.920 55.000 0.00 0.00 0.00 4.79
310 322 0.321653 AGTTGGTTGATCTGCGTCCC 60.322 55.000 0.00 0.00 0.00 4.46
311 323 0.605319 GTTGGTTGATCTGCGTCCCA 60.605 55.000 0.00 0.00 0.00 4.37
312 324 0.109532 TTGGTTGATCTGCGTCCCAA 59.890 50.000 0.00 0.00 0.00 4.12
313 325 0.605319 TGGTTGATCTGCGTCCCAAC 60.605 55.000 0.00 0.00 38.42 3.77
314 326 2.171635 GTTGATCTGCGTCCCAACC 58.828 57.895 0.00 0.00 34.46 3.77
315 327 0.321653 GTTGATCTGCGTCCCAACCT 60.322 55.000 0.00 0.00 34.46 3.50
316 328 0.321564 TTGATCTGCGTCCCAACCTG 60.322 55.000 0.00 0.00 0.00 4.00
317 329 1.450312 GATCTGCGTCCCAACCTGG 60.450 63.158 0.00 0.00 37.25 4.45
318 330 1.899437 GATCTGCGTCCCAACCTGGA 61.899 60.000 0.00 0.00 40.96 3.86
324 336 2.121963 TCCCAACCTGGACTGCCT 60.122 61.111 0.00 0.00 40.96 4.75
325 337 2.034687 CCCAACCTGGACTGCCTG 59.965 66.667 0.00 0.00 40.96 4.85
326 338 2.674380 CCAACCTGGACTGCCTGC 60.674 66.667 0.00 0.00 40.96 4.85
327 339 2.433446 CAACCTGGACTGCCTGCT 59.567 61.111 0.00 0.00 34.31 4.24
328 340 1.970114 CAACCTGGACTGCCTGCTG 60.970 63.158 0.00 0.00 34.31 4.41
329 341 2.149383 AACCTGGACTGCCTGCTGA 61.149 57.895 0.00 0.00 34.31 4.26
330 342 1.708993 AACCTGGACTGCCTGCTGAA 61.709 55.000 0.00 0.00 34.31 3.02
331 343 1.073722 CCTGGACTGCCTGCTGAAA 59.926 57.895 2.88 0.00 34.31 2.69
332 344 0.538057 CCTGGACTGCCTGCTGAAAA 60.538 55.000 2.88 0.00 34.31 2.29
333 345 1.321474 CTGGACTGCCTGCTGAAAAA 58.679 50.000 2.88 0.00 34.31 1.94
334 346 1.891150 CTGGACTGCCTGCTGAAAAAT 59.109 47.619 2.88 0.00 34.31 1.82
335 347 1.888512 TGGACTGCCTGCTGAAAAATC 59.111 47.619 2.88 0.00 34.31 2.17
336 348 1.135575 GGACTGCCTGCTGAAAAATCG 60.136 52.381 2.88 0.00 0.00 3.34
337 349 1.806542 GACTGCCTGCTGAAAAATCGA 59.193 47.619 2.88 0.00 0.00 3.59
338 350 2.421424 GACTGCCTGCTGAAAAATCGAT 59.579 45.455 2.88 0.00 0.00 3.59
339 351 2.821969 ACTGCCTGCTGAAAAATCGATT 59.178 40.909 4.39 4.39 0.00 3.34
340 352 3.176708 CTGCCTGCTGAAAAATCGATTG 58.823 45.455 12.25 0.00 0.00 2.67
341 353 1.922545 GCCTGCTGAAAAATCGATTGC 59.077 47.619 12.25 10.77 0.00 3.56
342 354 2.533266 CCTGCTGAAAAATCGATTGCC 58.467 47.619 12.25 4.69 0.00 4.52
343 355 2.094597 CCTGCTGAAAAATCGATTGCCA 60.095 45.455 12.25 9.01 0.00 4.92
344 356 2.919229 CTGCTGAAAAATCGATTGCCAC 59.081 45.455 12.25 4.86 0.00 5.01
345 357 1.913403 GCTGAAAAATCGATTGCCACG 59.087 47.619 12.25 2.27 0.00 4.94
346 358 2.414029 GCTGAAAAATCGATTGCCACGA 60.414 45.455 12.25 0.00 43.65 4.35
347 359 3.163594 CTGAAAAATCGATTGCCACGAC 58.836 45.455 12.25 0.80 42.37 4.34
348 360 2.550180 TGAAAAATCGATTGCCACGACA 59.450 40.909 12.25 3.31 42.37 4.35
349 361 2.611974 AAAATCGATTGCCACGACAC 57.388 45.000 12.25 0.00 42.37 3.67
350 362 1.518325 AAATCGATTGCCACGACACA 58.482 45.000 12.25 0.00 42.37 3.72
351 363 1.518325 AATCGATTGCCACGACACAA 58.482 45.000 10.50 0.00 42.37 3.33
352 364 1.078709 ATCGATTGCCACGACACAAG 58.921 50.000 0.00 0.00 42.37 3.16
353 365 1.154413 CGATTGCCACGACACAAGC 60.154 57.895 0.00 0.00 0.00 4.01
354 366 1.210155 GATTGCCACGACACAAGCC 59.790 57.895 0.00 0.00 0.00 4.35
355 367 2.200170 GATTGCCACGACACAAGCCC 62.200 60.000 0.00 0.00 0.00 5.19
356 368 2.974692 ATTGCCACGACACAAGCCCA 62.975 55.000 0.00 0.00 0.00 5.36
357 369 3.660111 GCCACGACACAAGCCCAC 61.660 66.667 0.00 0.00 0.00 4.61
358 370 3.345808 CCACGACACAAGCCCACG 61.346 66.667 0.00 0.00 0.00 4.94
359 371 4.012895 CACGACACAAGCCCACGC 62.013 66.667 0.00 0.00 0.00 5.34
379 391 2.322355 CGCAGGATGTCATTCCTCTT 57.678 50.000 1.97 0.00 44.54 2.85
380 392 1.938577 CGCAGGATGTCATTCCTCTTG 59.061 52.381 1.97 0.00 44.54 3.02
381 393 2.295885 GCAGGATGTCATTCCTCTTGG 58.704 52.381 1.97 0.00 44.54 3.61
382 394 2.928334 CAGGATGTCATTCCTCTTGGG 58.072 52.381 1.97 0.00 44.54 4.12
383 395 2.240667 CAGGATGTCATTCCTCTTGGGT 59.759 50.000 1.97 0.00 44.54 4.51
384 396 3.455910 CAGGATGTCATTCCTCTTGGGTA 59.544 47.826 1.97 0.00 44.54 3.69
385 397 4.103785 CAGGATGTCATTCCTCTTGGGTAT 59.896 45.833 1.97 0.00 44.54 2.73
386 398 4.103785 AGGATGTCATTCCTCTTGGGTATG 59.896 45.833 0.00 0.00 42.71 2.39
387 399 3.931907 TGTCATTCCTCTTGGGTATGG 57.068 47.619 0.00 0.00 41.41 2.74
388 400 3.189606 TGTCATTCCTCTTGGGTATGGT 58.810 45.455 0.00 0.00 41.41 3.55
389 401 3.591527 TGTCATTCCTCTTGGGTATGGTT 59.408 43.478 0.00 0.00 41.41 3.67
390 402 4.044065 TGTCATTCCTCTTGGGTATGGTTT 59.956 41.667 0.00 0.00 41.41 3.27
391 403 5.016831 GTCATTCCTCTTGGGTATGGTTTT 58.983 41.667 0.00 0.00 41.41 2.43
392 404 6.184789 GTCATTCCTCTTGGGTATGGTTTTA 58.815 40.000 0.00 0.00 41.41 1.52
393 405 6.661805 GTCATTCCTCTTGGGTATGGTTTTAA 59.338 38.462 0.00 0.00 41.41 1.52
394 406 6.661805 TCATTCCTCTTGGGTATGGTTTTAAC 59.338 38.462 0.00 0.00 41.41 2.01
395 407 5.853572 TCCTCTTGGGTATGGTTTTAACT 57.146 39.130 0.00 0.00 36.25 2.24
396 408 5.566469 TCCTCTTGGGTATGGTTTTAACTG 58.434 41.667 0.00 0.00 36.25 3.16
397 409 4.157840 CCTCTTGGGTATGGTTTTAACTGC 59.842 45.833 0.00 0.00 0.00 4.40
398 410 4.993028 TCTTGGGTATGGTTTTAACTGCT 58.007 39.130 0.00 0.00 0.00 4.24
399 411 5.390387 TCTTGGGTATGGTTTTAACTGCTT 58.610 37.500 0.00 0.00 0.00 3.91
400 412 6.544650 TCTTGGGTATGGTTTTAACTGCTTA 58.455 36.000 0.00 0.00 0.00 3.09
401 413 7.005296 TCTTGGGTATGGTTTTAACTGCTTAA 58.995 34.615 0.00 0.00 0.00 1.85
402 414 7.672239 TCTTGGGTATGGTTTTAACTGCTTAAT 59.328 33.333 0.00 0.00 0.00 1.40
403 415 7.784470 TGGGTATGGTTTTAACTGCTTAATT 57.216 32.000 0.00 0.00 0.00 1.40
404 416 8.880991 TGGGTATGGTTTTAACTGCTTAATTA 57.119 30.769 0.00 0.00 0.00 1.40
405 417 9.482175 TGGGTATGGTTTTAACTGCTTAATTAT 57.518 29.630 0.00 0.00 0.00 1.28
406 418 9.744468 GGGTATGGTTTTAACTGCTTAATTATG 57.256 33.333 0.00 0.00 0.00 1.90
410 422 7.543756 TGGTTTTAACTGCTTAATTATGAGCC 58.456 34.615 6.68 0.00 37.37 4.70
411 423 6.978659 GGTTTTAACTGCTTAATTATGAGCCC 59.021 38.462 6.68 0.00 37.37 5.19
412 424 7.363443 GGTTTTAACTGCTTAATTATGAGCCCA 60.363 37.037 6.68 0.00 37.37 5.36
413 425 7.710676 TTTAACTGCTTAATTATGAGCCCAA 57.289 32.000 6.68 0.00 37.37 4.12
414 426 7.710676 TTAACTGCTTAATTATGAGCCCAAA 57.289 32.000 6.68 0.00 37.37 3.28
415 427 5.841957 ACTGCTTAATTATGAGCCCAAAG 57.158 39.130 6.68 1.21 37.37 2.77
416 428 5.264395 ACTGCTTAATTATGAGCCCAAAGT 58.736 37.500 6.68 1.73 37.37 2.66
417 429 6.423182 ACTGCTTAATTATGAGCCCAAAGTA 58.577 36.000 6.68 0.00 37.37 2.24
418 430 6.889722 ACTGCTTAATTATGAGCCCAAAGTAA 59.110 34.615 6.68 0.00 37.37 2.24
419 431 7.095695 TGCTTAATTATGAGCCCAAAGTAAC 57.904 36.000 6.68 0.00 37.37 2.50
420 432 6.661377 TGCTTAATTATGAGCCCAAAGTAACA 59.339 34.615 6.68 0.00 37.37 2.41
421 433 7.341769 TGCTTAATTATGAGCCCAAAGTAACAT 59.658 33.333 6.68 0.00 37.37 2.71
422 434 7.862873 GCTTAATTATGAGCCCAAAGTAACATC 59.137 37.037 2.66 0.00 32.25 3.06
423 435 6.377327 AATTATGAGCCCAAAGTAACATCG 57.623 37.500 0.00 0.00 0.00 3.84
424 436 2.851263 TGAGCCCAAAGTAACATCGT 57.149 45.000 0.00 0.00 0.00 3.73
425 437 3.134574 TGAGCCCAAAGTAACATCGTT 57.865 42.857 0.00 0.00 0.00 3.85
426 438 3.482436 TGAGCCCAAAGTAACATCGTTT 58.518 40.909 0.00 0.00 0.00 3.60
427 439 3.886505 TGAGCCCAAAGTAACATCGTTTT 59.113 39.130 0.00 0.00 0.00 2.43
428 440 4.023536 TGAGCCCAAAGTAACATCGTTTTC 60.024 41.667 0.00 0.00 0.00 2.29
429 441 3.886505 AGCCCAAAGTAACATCGTTTTCA 59.113 39.130 0.00 0.00 0.00 2.69
430 442 4.522789 AGCCCAAAGTAACATCGTTTTCAT 59.477 37.500 0.00 0.00 0.00 2.57
431 443 5.010617 AGCCCAAAGTAACATCGTTTTCATT 59.989 36.000 0.00 0.00 0.00 2.57
432 444 5.694458 GCCCAAAGTAACATCGTTTTCATTT 59.306 36.000 0.00 0.00 0.00 2.32
433 445 6.128929 GCCCAAAGTAACATCGTTTTCATTTC 60.129 38.462 0.00 0.00 0.00 2.17
434 446 7.145323 CCCAAAGTAACATCGTTTTCATTTCT 58.855 34.615 0.00 0.00 0.00 2.52
435 447 7.651704 CCCAAAGTAACATCGTTTTCATTTCTT 59.348 33.333 0.00 0.00 0.00 2.52
436 448 9.030301 CCAAAGTAACATCGTTTTCATTTCTTT 57.970 29.630 0.00 0.00 0.00 2.52
439 451 8.061125 AGTAACATCGTTTTCATTTCTTTTGC 57.939 30.769 0.00 0.00 0.00 3.68
440 452 6.900568 AACATCGTTTTCATTTCTTTTGCA 57.099 29.167 0.00 0.00 0.00 4.08
441 453 6.900568 ACATCGTTTTCATTTCTTTTGCAA 57.099 29.167 0.00 0.00 0.00 4.08
442 454 7.481275 ACATCGTTTTCATTTCTTTTGCAAT 57.519 28.000 0.00 0.00 0.00 3.56
443 455 7.918643 ACATCGTTTTCATTTCTTTTGCAATT 58.081 26.923 0.00 0.00 0.00 2.32
444 456 8.397148 ACATCGTTTTCATTTCTTTTGCAATTT 58.603 25.926 0.00 0.00 0.00 1.82
445 457 8.675016 CATCGTTTTCATTTCTTTTGCAATTTG 58.325 29.630 0.00 0.00 0.00 2.32
446 458 7.968246 TCGTTTTCATTTCTTTTGCAATTTGA 58.032 26.923 0.00 0.00 0.00 2.69
447 459 7.902403 TCGTTTTCATTTCTTTTGCAATTTGAC 59.098 29.630 0.00 0.00 0.00 3.18
448 460 7.164008 CGTTTTCATTTCTTTTGCAATTTGACC 59.836 33.333 0.00 0.00 0.00 4.02
449 461 7.621428 TTTCATTTCTTTTGCAATTTGACCA 57.379 28.000 0.00 0.00 0.00 4.02
450 462 6.601741 TCATTTCTTTTGCAATTTGACCAC 57.398 33.333 0.00 0.00 0.00 4.16
451 463 6.111382 TCATTTCTTTTGCAATTTGACCACA 58.889 32.000 0.00 0.00 0.00 4.17
452 464 6.766944 TCATTTCTTTTGCAATTTGACCACAT 59.233 30.769 0.00 0.00 0.00 3.21
453 465 6.998968 TTTCTTTTGCAATTTGACCACATT 57.001 29.167 0.00 0.00 0.00 2.71
454 466 8.557864 CATTTCTTTTGCAATTTGACCACATTA 58.442 29.630 0.00 0.00 0.00 1.90
455 467 7.475771 TTCTTTTGCAATTTGACCACATTAC 57.524 32.000 0.00 0.00 0.00 1.89
456 468 6.815089 TCTTTTGCAATTTGACCACATTACT 58.185 32.000 0.00 0.00 0.00 2.24
457 469 6.700960 TCTTTTGCAATTTGACCACATTACTG 59.299 34.615 0.00 0.00 0.00 2.74
458 470 5.781210 TTGCAATTTGACCACATTACTGA 57.219 34.783 0.00 0.00 0.00 3.41
459 471 5.119931 TGCAATTTGACCACATTACTGAC 57.880 39.130 0.00 0.00 0.00 3.51
460 472 4.022416 TGCAATTTGACCACATTACTGACC 60.022 41.667 0.00 0.00 0.00 4.02
461 473 4.022416 GCAATTTGACCACATTACTGACCA 60.022 41.667 0.00 0.00 0.00 4.02
462 474 5.702865 CAATTTGACCACATTACTGACCAG 58.297 41.667 0.00 0.00 0.00 4.00
463 475 2.472695 TGACCACATTACTGACCAGC 57.527 50.000 0.00 0.00 0.00 4.85
464 476 1.696884 TGACCACATTACTGACCAGCA 59.303 47.619 0.00 0.00 0.00 4.41
465 477 2.305635 TGACCACATTACTGACCAGCAT 59.694 45.455 0.00 0.00 0.00 3.79
466 478 3.517500 TGACCACATTACTGACCAGCATA 59.482 43.478 0.00 0.00 0.00 3.14
467 479 3.871594 GACCACATTACTGACCAGCATAC 59.128 47.826 0.00 0.00 0.00 2.39
468 480 2.866156 CCACATTACTGACCAGCATACG 59.134 50.000 0.00 0.00 0.00 3.06
469 481 2.285220 CACATTACTGACCAGCATACGC 59.715 50.000 0.00 0.00 38.99 4.42
470 482 2.093711 ACATTACTGACCAGCATACGCA 60.094 45.455 0.00 0.00 42.27 5.24
471 483 2.753055 TTACTGACCAGCATACGCAA 57.247 45.000 0.00 0.00 42.27 4.85
472 484 2.979814 TACTGACCAGCATACGCAAT 57.020 45.000 0.00 0.00 42.27 3.56
473 485 2.113860 ACTGACCAGCATACGCAATT 57.886 45.000 0.00 0.00 42.27 2.32
474 486 2.436417 ACTGACCAGCATACGCAATTT 58.564 42.857 0.00 0.00 42.27 1.82
475 487 2.162208 ACTGACCAGCATACGCAATTTG 59.838 45.455 0.00 0.00 42.27 2.32
476 488 2.419673 CTGACCAGCATACGCAATTTGA 59.580 45.455 0.00 0.00 42.27 2.69
477 489 2.161410 TGACCAGCATACGCAATTTGAC 59.839 45.455 0.00 0.00 42.27 3.18
478 490 1.472480 ACCAGCATACGCAATTTGACC 59.528 47.619 0.00 0.00 42.27 4.02
479 491 1.472082 CCAGCATACGCAATTTGACCA 59.528 47.619 0.00 0.00 42.27 4.02
480 492 2.518949 CAGCATACGCAATTTGACCAC 58.481 47.619 0.00 0.00 42.27 4.16
481 493 2.095314 CAGCATACGCAATTTGACCACA 60.095 45.455 0.00 0.00 42.27 4.17
482 494 2.754552 AGCATACGCAATTTGACCACAT 59.245 40.909 0.00 0.00 42.27 3.21
483 495 3.193267 AGCATACGCAATTTGACCACATT 59.807 39.130 0.00 0.00 42.27 2.71
484 496 4.397730 AGCATACGCAATTTGACCACATTA 59.602 37.500 0.00 0.00 42.27 1.90
485 497 4.499040 GCATACGCAATTTGACCACATTAC 59.501 41.667 0.00 0.00 38.36 1.89
486 498 5.676079 GCATACGCAATTTGACCACATTACT 60.676 40.000 0.00 0.00 38.36 2.24
487 499 4.159377 ACGCAATTTGACCACATTACTG 57.841 40.909 0.00 0.00 0.00 2.74
488 500 3.818210 ACGCAATTTGACCACATTACTGA 59.182 39.130 0.00 0.00 0.00 3.41
489 501 4.158384 CGCAATTTGACCACATTACTGAC 58.842 43.478 0.00 0.00 0.00 3.51
490 502 4.485163 GCAATTTGACCACATTACTGACC 58.515 43.478 0.00 0.00 0.00 4.02
491 503 4.022416 GCAATTTGACCACATTACTGACCA 60.022 41.667 0.00 0.00 0.00 4.02
492 504 5.702865 CAATTTGACCACATTACTGACCAG 58.297 41.667 0.00 0.00 0.00 4.00
493 505 2.472695 TGACCACATTACTGACCAGC 57.527 50.000 0.00 0.00 0.00 4.85
494 506 1.696884 TGACCACATTACTGACCAGCA 59.303 47.619 0.00 0.00 0.00 4.41
495 507 2.305635 TGACCACATTACTGACCAGCAT 59.694 45.455 0.00 0.00 0.00 3.79
496 508 3.517500 TGACCACATTACTGACCAGCATA 59.482 43.478 0.00 0.00 0.00 3.14
497 509 3.871594 GACCACATTACTGACCAGCATAC 59.128 47.826 0.00 0.00 0.00 2.39
498 510 3.519510 ACCACATTACTGACCAGCATACT 59.480 43.478 0.00 0.00 0.00 2.12
499 511 3.873361 CCACATTACTGACCAGCATACTG 59.127 47.826 0.00 0.00 44.05 2.74
510 522 2.586258 AGCATACTGACCAGCTTACG 57.414 50.000 0.00 0.00 32.52 3.18
511 523 1.137086 AGCATACTGACCAGCTTACGG 59.863 52.381 0.00 0.00 32.52 4.02
512 524 1.806623 GCATACTGACCAGCTTACGGG 60.807 57.143 0.00 0.00 37.14 5.28
513 525 1.120530 ATACTGACCAGCTTACGGGG 58.879 55.000 0.00 0.00 35.07 5.73
514 526 0.974010 TACTGACCAGCTTACGGGGG 60.974 60.000 0.00 0.00 35.07 5.40
515 527 2.203877 TGACCAGCTTACGGGGGT 60.204 61.111 0.00 0.00 35.07 4.95
516 528 2.582978 GACCAGCTTACGGGGGTC 59.417 66.667 3.15 3.15 42.60 4.46
517 529 1.988406 GACCAGCTTACGGGGGTCT 60.988 63.158 10.60 0.00 44.99 3.85
518 530 1.957765 GACCAGCTTACGGGGGTCTC 61.958 65.000 10.60 0.00 44.99 3.36
519 531 1.987855 CCAGCTTACGGGGGTCTCA 60.988 63.158 0.00 0.00 0.00 3.27
520 532 1.517832 CAGCTTACGGGGGTCTCAG 59.482 63.158 0.00 0.00 0.00 3.35
521 533 0.970937 CAGCTTACGGGGGTCTCAGA 60.971 60.000 0.00 0.00 0.00 3.27
522 534 0.684805 AGCTTACGGGGGTCTCAGAG 60.685 60.000 0.00 0.00 0.00 3.35
523 535 0.683504 GCTTACGGGGGTCTCAGAGA 60.684 60.000 0.00 0.00 0.00 3.10
524 536 2.030045 GCTTACGGGGGTCTCAGAGAT 61.030 57.143 2.64 0.00 0.00 2.75
525 537 2.752154 GCTTACGGGGGTCTCAGAGATA 60.752 54.545 2.64 0.00 0.00 1.98
526 538 2.653234 TACGGGGGTCTCAGAGATAC 57.347 55.000 2.64 0.00 0.00 2.24
527 539 0.106116 ACGGGGGTCTCAGAGATACC 60.106 60.000 2.64 9.30 0.00 2.73
528 540 1.173444 CGGGGGTCTCAGAGATACCG 61.173 65.000 19.58 19.58 33.67 4.02
529 541 0.828343 GGGGGTCTCAGAGATACCGG 60.828 65.000 2.64 0.00 30.78 5.28
530 542 0.185416 GGGGTCTCAGAGATACCGGA 59.815 60.000 9.46 0.00 30.78 5.14
531 543 1.611519 GGGTCTCAGAGATACCGGAG 58.388 60.000 9.46 0.00 30.78 4.63
546 558 1.257743 CGGAGGAAGAGAGTCAACCA 58.742 55.000 0.00 0.00 0.00 3.67
547 559 1.827969 CGGAGGAAGAGAGTCAACCAT 59.172 52.381 0.00 0.00 0.00 3.55
548 560 3.024547 CGGAGGAAGAGAGTCAACCATA 58.975 50.000 0.00 0.00 0.00 2.74
549 561 3.447586 CGGAGGAAGAGAGTCAACCATAA 59.552 47.826 0.00 0.00 0.00 1.90
550 562 4.440802 CGGAGGAAGAGAGTCAACCATAAG 60.441 50.000 0.00 0.00 0.00 1.73
551 563 4.438148 GAGGAAGAGAGTCAACCATAAGC 58.562 47.826 0.00 0.00 0.00 3.09
552 564 3.198853 AGGAAGAGAGTCAACCATAAGCC 59.801 47.826 0.00 0.00 0.00 4.35
553 565 3.055094 GGAAGAGAGTCAACCATAAGCCA 60.055 47.826 0.00 0.00 0.00 4.75
554 566 3.902881 AGAGAGTCAACCATAAGCCAG 57.097 47.619 0.00 0.00 0.00 4.85
555 567 2.093235 AGAGAGTCAACCATAAGCCAGC 60.093 50.000 0.00 0.00 0.00 4.85
556 568 1.630369 AGAGTCAACCATAAGCCAGCA 59.370 47.619 0.00 0.00 0.00 4.41
557 569 2.240667 AGAGTCAACCATAAGCCAGCAT 59.759 45.455 0.00 0.00 0.00 3.79
558 570 2.357009 GAGTCAACCATAAGCCAGCATG 59.643 50.000 0.00 0.00 0.00 4.06
559 571 2.094675 GTCAACCATAAGCCAGCATGT 58.905 47.619 0.00 0.00 0.00 3.21
560 572 2.093890 TCAACCATAAGCCAGCATGTG 58.906 47.619 0.00 0.00 0.00 3.21
561 573 2.093890 CAACCATAAGCCAGCATGTGA 58.906 47.619 0.00 0.00 0.00 3.58
562 574 2.691526 CAACCATAAGCCAGCATGTGAT 59.308 45.455 0.00 0.00 0.00 3.06
563 575 2.579873 ACCATAAGCCAGCATGTGATC 58.420 47.619 0.00 0.00 0.00 2.92
564 576 2.174210 ACCATAAGCCAGCATGTGATCT 59.826 45.455 0.00 0.00 0.00 2.75
565 577 2.812591 CCATAAGCCAGCATGTGATCTC 59.187 50.000 0.00 0.00 0.00 2.75
566 578 2.229675 TAAGCCAGCATGTGATCTCG 57.770 50.000 0.00 0.00 0.00 4.04
567 579 1.094073 AAGCCAGCATGTGATCTCGC 61.094 55.000 0.00 0.00 0.00 5.03
568 580 2.879070 GCCAGCATGTGATCTCGCG 61.879 63.158 0.00 0.00 0.00 5.87
569 581 1.520120 CCAGCATGTGATCTCGCGT 60.520 57.895 5.77 0.00 0.00 6.01
570 582 0.249031 CCAGCATGTGATCTCGCGTA 60.249 55.000 5.77 0.00 0.00 4.42
571 583 1.603931 CCAGCATGTGATCTCGCGTAT 60.604 52.381 5.77 0.30 0.00 3.06
572 584 2.130395 CAGCATGTGATCTCGCGTATT 58.870 47.619 5.77 0.00 0.00 1.89
573 585 2.541346 CAGCATGTGATCTCGCGTATTT 59.459 45.455 5.77 0.00 0.00 1.40
574 586 3.001634 CAGCATGTGATCTCGCGTATTTT 59.998 43.478 5.77 0.00 0.00 1.82
575 587 3.001634 AGCATGTGATCTCGCGTATTTTG 59.998 43.478 5.77 0.00 0.00 2.44
576 588 3.242413 GCATGTGATCTCGCGTATTTTGT 60.242 43.478 5.77 0.00 0.00 2.83
577 589 4.727734 GCATGTGATCTCGCGTATTTTGTT 60.728 41.667 5.77 0.00 0.00 2.83
578 590 4.577687 TGTGATCTCGCGTATTTTGTTC 57.422 40.909 5.77 0.00 0.00 3.18
579 591 4.242475 TGTGATCTCGCGTATTTTGTTCT 58.758 39.130 5.77 0.00 0.00 3.01
580 592 5.404096 TGTGATCTCGCGTATTTTGTTCTA 58.596 37.500 5.77 0.00 0.00 2.10
581 593 5.287752 TGTGATCTCGCGTATTTTGTTCTAC 59.712 40.000 5.77 0.00 0.00 2.59
582 594 5.287752 GTGATCTCGCGTATTTTGTTCTACA 59.712 40.000 5.77 0.00 0.00 2.74
583 595 5.287752 TGATCTCGCGTATTTTGTTCTACAC 59.712 40.000 5.77 0.00 0.00 2.90
584 596 4.548494 TCTCGCGTATTTTGTTCTACACA 58.452 39.130 5.77 0.00 0.00 3.72
585 597 4.983538 TCTCGCGTATTTTGTTCTACACAA 59.016 37.500 5.77 0.00 44.11 3.33
586 598 5.118050 TCTCGCGTATTTTGTTCTACACAAG 59.882 40.000 5.77 0.00 46.37 3.16
587 599 4.983538 TCGCGTATTTTGTTCTACACAAGA 59.016 37.500 5.77 0.00 46.37 3.02
588 600 5.118050 TCGCGTATTTTGTTCTACACAAGAG 59.882 40.000 5.77 0.00 46.37 2.85
589 601 5.618561 GCGTATTTTGTTCTACACAAGAGG 58.381 41.667 0.00 0.00 46.37 3.69
590 602 5.178809 GCGTATTTTGTTCTACACAAGAGGT 59.821 40.000 0.00 0.00 46.37 3.85
591 603 6.366877 GCGTATTTTGTTCTACACAAGAGGTA 59.633 38.462 0.00 0.00 46.37 3.08
592 604 7.620806 GCGTATTTTGTTCTACACAAGAGGTAC 60.621 40.741 0.00 0.00 46.37 3.34
593 605 7.148689 CGTATTTTGTTCTACACAAGAGGTACC 60.149 40.741 2.73 2.73 46.37 3.34
594 606 5.617528 TTTGTTCTACACAAGAGGTACCA 57.382 39.130 15.94 0.00 46.37 3.25
595 607 5.617528 TTGTTCTACACAAGAGGTACCAA 57.382 39.130 15.94 0.00 40.71 3.67
596 608 5.617528 TGTTCTACACAAGAGGTACCAAA 57.382 39.130 15.94 0.00 35.05 3.28
597 609 5.362263 TGTTCTACACAAGAGGTACCAAAC 58.638 41.667 15.94 5.16 35.05 2.93
598 610 5.104859 TGTTCTACACAAGAGGTACCAAACA 60.105 40.000 15.94 5.69 35.05 2.83
599 611 4.952460 TCTACACAAGAGGTACCAAACAC 58.048 43.478 15.94 0.00 0.00 3.32
600 612 3.637911 ACACAAGAGGTACCAAACACA 57.362 42.857 15.94 0.00 0.00 3.72
601 613 3.541632 ACACAAGAGGTACCAAACACAG 58.458 45.455 15.94 0.61 0.00 3.66
602 614 2.878406 CACAAGAGGTACCAAACACAGG 59.122 50.000 15.94 0.00 0.00 4.00
603 615 2.775384 ACAAGAGGTACCAAACACAGGA 59.225 45.455 15.94 0.00 0.00 3.86
604 616 3.394606 ACAAGAGGTACCAAACACAGGAT 59.605 43.478 15.94 0.00 0.00 3.24
605 617 4.141251 ACAAGAGGTACCAAACACAGGATT 60.141 41.667 15.94 0.00 0.00 3.01
606 618 4.724279 AGAGGTACCAAACACAGGATTT 57.276 40.909 15.94 0.00 0.00 2.17
607 619 4.652822 AGAGGTACCAAACACAGGATTTC 58.347 43.478 15.94 0.00 0.00 2.17
608 620 4.351111 AGAGGTACCAAACACAGGATTTCT 59.649 41.667 15.94 0.00 0.00 2.52
620 632 4.756084 CAGGATTTCTGTCTTTGTGTCC 57.244 45.455 0.00 0.00 38.64 4.02
621 633 4.392940 CAGGATTTCTGTCTTTGTGTCCT 58.607 43.478 0.00 0.00 38.64 3.85
622 634 4.823989 CAGGATTTCTGTCTTTGTGTCCTT 59.176 41.667 0.00 0.00 38.64 3.36
623 635 5.300286 CAGGATTTCTGTCTTTGTGTCCTTT 59.700 40.000 0.00 0.00 38.64 3.11
624 636 5.532779 AGGATTTCTGTCTTTGTGTCCTTTC 59.467 40.000 0.00 0.00 31.05 2.62
625 637 5.532779 GGATTTCTGTCTTTGTGTCCTTTCT 59.467 40.000 0.00 0.00 0.00 2.52
626 638 6.039829 GGATTTCTGTCTTTGTGTCCTTTCTT 59.960 38.462 0.00 0.00 0.00 2.52
627 639 7.228706 GGATTTCTGTCTTTGTGTCCTTTCTTA 59.771 37.037 0.00 0.00 0.00 2.10
628 640 8.697507 ATTTCTGTCTTTGTGTCCTTTCTTAT 57.302 30.769 0.00 0.00 0.00 1.73
629 641 7.730364 TTCTGTCTTTGTGTCCTTTCTTATC 57.270 36.000 0.00 0.00 0.00 1.75
630 642 5.926542 TCTGTCTTTGTGTCCTTTCTTATCG 59.073 40.000 0.00 0.00 0.00 2.92
631 643 5.849510 TGTCTTTGTGTCCTTTCTTATCGA 58.150 37.500 0.00 0.00 0.00 3.59
632 644 5.926542 TGTCTTTGTGTCCTTTCTTATCGAG 59.073 40.000 0.00 0.00 0.00 4.04
633 645 6.157211 GTCTTTGTGTCCTTTCTTATCGAGA 58.843 40.000 0.00 0.00 0.00 4.04
634 646 6.645415 GTCTTTGTGTCCTTTCTTATCGAGAA 59.355 38.462 0.00 0.00 42.56 2.87
635 647 7.332182 GTCTTTGTGTCCTTTCTTATCGAGAAT 59.668 37.037 0.00 0.00 43.65 2.40
636 648 8.528643 TCTTTGTGTCCTTTCTTATCGAGAATA 58.471 33.333 0.00 0.00 43.65 1.75
637 649 9.319143 CTTTGTGTCCTTTCTTATCGAGAATAT 57.681 33.333 0.00 0.00 43.65 1.28
638 650 8.648557 TTGTGTCCTTTCTTATCGAGAATATG 57.351 34.615 0.00 0.00 43.65 1.78
639 651 6.701841 TGTGTCCTTTCTTATCGAGAATATGC 59.298 38.462 0.00 0.00 43.65 3.14
640 652 5.920840 TGTCCTTTCTTATCGAGAATATGCG 59.079 40.000 0.00 0.00 43.65 4.73
641 653 6.150318 GTCCTTTCTTATCGAGAATATGCGA 58.850 40.000 0.00 0.00 43.65 5.10
643 655 7.968956 GTCCTTTCTTATCGAGAATATGCGATA 59.031 37.037 9.99 9.99 44.53 2.92
644 656 8.687242 TCCTTTCTTATCGAGAATATGCGATAT 58.313 33.333 13.14 0.00 45.47 1.63
645 657 8.963130 CCTTTCTTATCGAGAATATGCGATATC 58.037 37.037 13.14 0.00 45.47 1.63
646 658 9.508567 CTTTCTTATCGAGAATATGCGATATCA 57.491 33.333 13.14 4.50 45.47 2.15
648 660 9.670719 TTCTTATCGAGAATATGCGATATCATC 57.329 33.333 13.14 0.00 45.47 2.92
649 661 8.840321 TCTTATCGAGAATATGCGATATCATCA 58.160 33.333 13.14 0.31 45.47 3.07
650 662 9.455847 CTTATCGAGAATATGCGATATCATCAA 57.544 33.333 13.14 3.19 45.47 2.57
651 663 7.691430 ATCGAGAATATGCGATATCATCAAC 57.309 36.000 3.12 0.00 44.53 3.18
652 664 6.620678 TCGAGAATATGCGATATCATCAACA 58.379 36.000 3.12 0.00 0.00 3.33
653 665 7.260603 TCGAGAATATGCGATATCATCAACAT 58.739 34.615 3.12 1.23 32.48 2.71
654 666 7.761249 TCGAGAATATGCGATATCATCAACATT 59.239 33.333 3.12 4.71 30.91 2.71
655 667 8.385858 CGAGAATATGCGATATCATCAACATTT 58.614 33.333 3.12 0.00 30.91 2.32
660 672 6.917217 TGCGATATCATCAACATTTACACA 57.083 33.333 3.12 0.00 0.00 3.72
661 673 7.313951 TGCGATATCATCAACATTTACACAA 57.686 32.000 3.12 0.00 0.00 3.33
662 674 7.756558 TGCGATATCATCAACATTTACACAAA 58.243 30.769 3.12 0.00 0.00 2.83
663 675 8.404765 TGCGATATCATCAACATTTACACAAAT 58.595 29.630 3.12 0.00 34.60 2.32
664 676 9.236691 GCGATATCATCAACATTTACACAAATT 57.763 29.630 3.12 0.00 31.82 1.82
670 682 9.474920 TCATCAACATTTACACAAATTCCTTTC 57.525 29.630 0.00 0.00 31.82 2.62
671 683 9.480053 CATCAACATTTACACAAATTCCTTTCT 57.520 29.630 0.00 0.00 31.82 2.52
672 684 9.696917 ATCAACATTTACACAAATTCCTTTCTC 57.303 29.630 0.00 0.00 31.82 2.87
673 685 8.141268 TCAACATTTACACAAATTCCTTTCTCC 58.859 33.333 0.00 0.00 31.82 3.71
674 686 7.839680 ACATTTACACAAATTCCTTTCTCCT 57.160 32.000 0.00 0.00 31.82 3.69
675 687 7.661040 ACATTTACACAAATTCCTTTCTCCTG 58.339 34.615 0.00 0.00 31.82 3.86
676 688 7.287696 ACATTTACACAAATTCCTTTCTCCTGT 59.712 33.333 0.00 0.00 31.82 4.00
677 689 6.633500 TTACACAAATTCCTTTCTCCTGTG 57.367 37.500 0.00 0.00 0.00 3.66
678 690 3.319122 ACACAAATTCCTTTCTCCTGTGC 59.681 43.478 0.00 0.00 0.00 4.57
679 691 3.318839 CACAAATTCCTTTCTCCTGTGCA 59.681 43.478 0.00 0.00 0.00 4.57
680 692 3.571401 ACAAATTCCTTTCTCCTGTGCAG 59.429 43.478 0.00 0.00 0.00 4.41
690 702 4.790962 CTGTGCAGGCTGCCCGAT 62.791 66.667 34.58 0.00 44.23 4.18
691 703 3.390183 CTGTGCAGGCTGCCCGATA 62.390 63.158 34.58 14.80 44.23 2.92
692 704 2.111878 GTGCAGGCTGCCCGATAT 59.888 61.111 34.58 0.00 44.23 1.63
693 705 1.526917 GTGCAGGCTGCCCGATATT 60.527 57.895 34.58 0.00 44.23 1.28
694 706 0.250295 GTGCAGGCTGCCCGATATTA 60.250 55.000 34.58 12.43 44.23 0.98
695 707 0.035317 TGCAGGCTGCCCGATATTAG 59.965 55.000 34.58 0.00 44.23 1.73
696 708 0.035458 GCAGGCTGCCCGATATTAGT 59.965 55.000 28.87 0.00 37.42 2.24
697 709 1.543429 GCAGGCTGCCCGATATTAGTT 60.543 52.381 28.87 0.00 37.42 2.24
698 710 2.851195 CAGGCTGCCCGATATTAGTTT 58.149 47.619 16.57 0.00 35.76 2.66
699 711 2.549754 CAGGCTGCCCGATATTAGTTTG 59.450 50.000 16.57 0.00 35.76 2.93
700 712 1.880027 GGCTGCCCGATATTAGTTTGG 59.120 52.381 7.66 0.00 0.00 3.28
701 713 2.572290 GCTGCCCGATATTAGTTTGGT 58.428 47.619 0.00 0.00 0.00 3.67
702 714 2.290641 GCTGCCCGATATTAGTTTGGTG 59.709 50.000 0.00 0.00 0.00 4.17
703 715 2.290641 CTGCCCGATATTAGTTTGGTGC 59.709 50.000 0.00 0.00 0.00 5.01
704 716 1.607148 GCCCGATATTAGTTTGGTGCC 59.393 52.381 0.00 0.00 0.00 5.01
705 717 2.925724 CCCGATATTAGTTTGGTGCCA 58.074 47.619 0.00 0.00 0.00 4.92
706 718 2.878406 CCCGATATTAGTTTGGTGCCAG 59.122 50.000 0.00 0.00 0.00 4.85
707 719 3.433031 CCCGATATTAGTTTGGTGCCAGA 60.433 47.826 0.00 0.00 0.00 3.86
708 720 3.560068 CCGATATTAGTTTGGTGCCAGAC 59.440 47.826 3.95 3.95 0.00 3.51
709 721 4.442706 CGATATTAGTTTGGTGCCAGACT 58.557 43.478 16.87 16.87 42.75 3.24
710 722 4.271049 CGATATTAGTTTGGTGCCAGACTG 59.729 45.833 20.48 0.00 40.80 3.51
711 723 1.604604 TTAGTTTGGTGCCAGACTGC 58.395 50.000 20.48 0.00 40.80 4.40
712 724 0.250727 TAGTTTGGTGCCAGACTGCC 60.251 55.000 20.48 0.00 40.80 4.85
713 725 1.827789 GTTTGGTGCCAGACTGCCA 60.828 57.895 4.83 0.00 0.00 4.92
714 726 1.827789 TTTGGTGCCAGACTGCCAC 60.828 57.895 8.04 8.04 0.00 5.01
715 727 2.283143 TTTGGTGCCAGACTGCCACT 62.283 55.000 15.52 0.00 0.00 4.00
716 728 1.414866 TTGGTGCCAGACTGCCACTA 61.415 55.000 15.52 7.51 0.00 2.74
717 729 1.374947 GGTGCCAGACTGCCACTAA 59.625 57.895 15.52 0.00 0.00 2.24
718 730 0.035056 GGTGCCAGACTGCCACTAAT 60.035 55.000 15.52 0.00 0.00 1.73
719 731 1.614317 GGTGCCAGACTGCCACTAATT 60.614 52.381 15.52 0.00 0.00 1.40
720 732 1.740025 GTGCCAGACTGCCACTAATTC 59.260 52.381 9.26 0.00 0.00 2.17
721 733 1.630369 TGCCAGACTGCCACTAATTCT 59.370 47.619 0.00 0.00 0.00 2.40
722 734 2.040278 TGCCAGACTGCCACTAATTCTT 59.960 45.455 0.00 0.00 0.00 2.52
723 735 2.680339 GCCAGACTGCCACTAATTCTTC 59.320 50.000 0.00 0.00 0.00 2.87
724 736 2.932614 CCAGACTGCCACTAATTCTTCG 59.067 50.000 0.00 0.00 0.00 3.79
725 737 3.589988 CAGACTGCCACTAATTCTTCGT 58.410 45.455 0.00 0.00 0.00 3.85
726 738 3.369147 CAGACTGCCACTAATTCTTCGTG 59.631 47.826 0.00 0.00 0.00 4.35
731 743 2.972625 CCACTAATTCTTCGTGGCTGA 58.027 47.619 0.00 0.00 41.39 4.26
732 744 3.334691 CCACTAATTCTTCGTGGCTGAA 58.665 45.455 0.00 0.00 41.39 3.02
733 745 3.751175 CCACTAATTCTTCGTGGCTGAAA 59.249 43.478 0.00 0.00 41.39 2.69
734 746 4.378459 CCACTAATTCTTCGTGGCTGAAAC 60.378 45.833 0.00 0.00 41.39 2.78
735 747 4.452455 CACTAATTCTTCGTGGCTGAAACT 59.548 41.667 0.00 0.00 0.00 2.66
736 748 5.637810 CACTAATTCTTCGTGGCTGAAACTA 59.362 40.000 0.00 0.00 0.00 2.24
737 749 5.869888 ACTAATTCTTCGTGGCTGAAACTAG 59.130 40.000 0.00 0.00 0.00 2.57
738 750 3.746045 TTCTTCGTGGCTGAAACTAGT 57.254 42.857 0.00 0.00 0.00 2.57
739 751 3.746045 TCTTCGTGGCTGAAACTAGTT 57.254 42.857 1.12 1.12 0.00 2.24
740 752 4.067972 TCTTCGTGGCTGAAACTAGTTT 57.932 40.909 20.67 20.67 35.14 2.66
741 753 3.807622 TCTTCGTGGCTGAAACTAGTTTG 59.192 43.478 25.17 12.82 32.11 2.93
742 754 3.462483 TCGTGGCTGAAACTAGTTTGA 57.538 42.857 25.17 16.19 32.11 2.69
743 755 3.799366 TCGTGGCTGAAACTAGTTTGAA 58.201 40.909 25.17 12.09 32.11 2.69
744 756 4.193090 TCGTGGCTGAAACTAGTTTGAAA 58.807 39.130 25.17 9.72 32.11 2.69
745 757 4.034742 TCGTGGCTGAAACTAGTTTGAAAC 59.965 41.667 25.17 13.50 32.11 2.78
746 758 4.607955 GTGGCTGAAACTAGTTTGAAACC 58.392 43.478 25.17 19.44 32.11 3.27
747 759 3.314080 TGGCTGAAACTAGTTTGAAACCG 59.686 43.478 25.17 6.51 32.11 4.44
748 760 3.304458 GGCTGAAACTAGTTTGAAACCGG 60.304 47.826 25.17 15.33 32.11 5.28
749 761 3.562557 GCTGAAACTAGTTTGAAACCGGA 59.437 43.478 25.17 0.00 32.11 5.14
750 762 4.215613 GCTGAAACTAGTTTGAAACCGGAT 59.784 41.667 25.17 0.00 32.11 4.18
751 763 5.617087 GCTGAAACTAGTTTGAAACCGGATC 60.617 44.000 25.17 6.78 32.11 3.36
752 764 5.617252 TGAAACTAGTTTGAAACCGGATCT 58.383 37.500 25.17 0.00 32.11 2.75
753 765 6.059484 TGAAACTAGTTTGAAACCGGATCTT 58.941 36.000 25.17 0.00 32.11 2.40
754 766 6.204108 TGAAACTAGTTTGAAACCGGATCTTC 59.796 38.462 25.17 8.64 32.11 2.87
755 767 5.485209 ACTAGTTTGAAACCGGATCTTCT 57.515 39.130 9.46 8.54 0.00 2.85
756 768 5.866207 ACTAGTTTGAAACCGGATCTTCTT 58.134 37.500 9.46 0.00 0.00 2.52
757 769 6.296803 ACTAGTTTGAAACCGGATCTTCTTT 58.703 36.000 9.46 0.00 0.00 2.52
758 770 6.771267 ACTAGTTTGAAACCGGATCTTCTTTT 59.229 34.615 9.46 0.00 0.00 2.27
759 771 6.465439 AGTTTGAAACCGGATCTTCTTTTT 57.535 33.333 9.46 0.00 0.00 1.94
760 772 6.273071 AGTTTGAAACCGGATCTTCTTTTTG 58.727 36.000 9.46 0.00 0.00 2.44
761 773 5.845391 TTGAAACCGGATCTTCTTTTTGT 57.155 34.783 9.46 0.00 0.00 2.83
762 774 5.845391 TGAAACCGGATCTTCTTTTTGTT 57.155 34.783 9.46 0.00 0.00 2.83
763 775 6.945938 TGAAACCGGATCTTCTTTTTGTTA 57.054 33.333 9.46 0.00 0.00 2.41
764 776 7.519032 TGAAACCGGATCTTCTTTTTGTTAT 57.481 32.000 9.46 0.00 0.00 1.89
765 777 7.947282 TGAAACCGGATCTTCTTTTTGTTATT 58.053 30.769 9.46 0.00 0.00 1.40
766 778 9.069082 TGAAACCGGATCTTCTTTTTGTTATTA 57.931 29.630 9.46 0.00 0.00 0.98
919 933 0.963962 GTACTCGTGACAAGGTGGGA 59.036 55.000 0.00 0.00 0.00 4.37
1600 1802 4.200283 GCCGCTCTCCTCGTCTGG 62.200 72.222 0.00 0.00 0.00 3.86
2592 2794 2.593978 CTGGGAGGCTGATGGTGG 59.406 66.667 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 171 1.591059 CGAGCTGGGATTGAGCGAG 60.591 63.158 0.00 0.00 41.61 5.03
164 176 2.688666 AGGGCGAGCTGGGATTGA 60.689 61.111 0.00 0.00 0.00 2.57
239 251 0.620556 TCCTCCCAGTTCAAGGATGC 59.379 55.000 0.00 0.00 34.26 3.91
245 257 5.453339 CGAGCTTTATATCCTCCCAGTTCAA 60.453 44.000 0.00 0.00 0.00 2.69
246 258 4.039245 CGAGCTTTATATCCTCCCAGTTCA 59.961 45.833 0.00 0.00 0.00 3.18
247 259 4.281182 TCGAGCTTTATATCCTCCCAGTTC 59.719 45.833 0.00 0.00 0.00 3.01
248 260 4.223953 TCGAGCTTTATATCCTCCCAGTT 58.776 43.478 0.00 0.00 0.00 3.16
249 261 3.829601 CTCGAGCTTTATATCCTCCCAGT 59.170 47.826 0.00 0.00 0.00 4.00
250 262 4.082463 GTCTCGAGCTTTATATCCTCCCAG 60.082 50.000 7.81 0.00 0.00 4.45
251 263 3.827302 GTCTCGAGCTTTATATCCTCCCA 59.173 47.826 7.81 0.00 0.00 4.37
252 264 3.193903 GGTCTCGAGCTTTATATCCTCCC 59.806 52.174 7.81 0.00 0.00 4.30
253 265 4.083565 AGGTCTCGAGCTTTATATCCTCC 58.916 47.826 7.81 0.00 35.28 4.30
254 266 5.241949 TCAAGGTCTCGAGCTTTATATCCTC 59.758 44.000 7.81 0.00 45.80 3.71
255 267 5.010213 GTCAAGGTCTCGAGCTTTATATCCT 59.990 44.000 7.81 2.51 45.80 3.24
256 268 5.224135 GTCAAGGTCTCGAGCTTTATATCC 58.776 45.833 7.81 0.26 45.80 2.59
257 269 4.912766 CGTCAAGGTCTCGAGCTTTATATC 59.087 45.833 7.81 0.00 45.80 1.63
258 270 4.579340 TCGTCAAGGTCTCGAGCTTTATAT 59.421 41.667 7.81 0.00 45.80 0.86
259 271 3.943381 TCGTCAAGGTCTCGAGCTTTATA 59.057 43.478 7.81 0.00 45.80 0.98
260 272 2.753452 TCGTCAAGGTCTCGAGCTTTAT 59.247 45.455 7.81 0.00 45.80 1.40
261 273 2.156917 TCGTCAAGGTCTCGAGCTTTA 58.843 47.619 7.81 0.00 45.80 1.85
262 274 0.959553 TCGTCAAGGTCTCGAGCTTT 59.040 50.000 7.81 2.95 45.80 3.51
264 276 1.309499 CCTCGTCAAGGTCTCGAGCT 61.309 60.000 7.81 0.00 46.15 4.09
265 277 1.137825 CCTCGTCAAGGTCTCGAGC 59.862 63.158 7.81 2.69 46.15 5.03
266 278 0.961358 ACCCTCGTCAAGGTCTCGAG 60.961 60.000 5.93 5.93 44.56 4.04
267 279 1.074423 ACCCTCGTCAAGGTCTCGA 59.926 57.895 0.00 0.00 44.56 4.04
268 280 1.213013 CACCCTCGTCAAGGTCTCG 59.787 63.158 0.00 0.00 44.56 4.04
269 281 1.079750 GCACCCTCGTCAAGGTCTC 60.080 63.158 0.00 0.00 44.56 3.36
270 282 1.407656 TTGCACCCTCGTCAAGGTCT 61.408 55.000 0.00 0.00 44.56 3.85
271 283 0.951040 CTTGCACCCTCGTCAAGGTC 60.951 60.000 0.00 0.00 44.56 3.85
272 284 1.071471 CTTGCACCCTCGTCAAGGT 59.929 57.895 0.00 0.00 44.56 3.50
273 285 0.671781 CTCTTGCACCCTCGTCAAGG 60.672 60.000 0.00 0.00 45.77 3.61
274 286 0.034059 ACTCTTGCACCCTCGTCAAG 59.966 55.000 0.00 0.00 38.73 3.02
275 287 0.468226 AACTCTTGCACCCTCGTCAA 59.532 50.000 0.00 0.00 0.00 3.18
276 288 0.249868 CAACTCTTGCACCCTCGTCA 60.250 55.000 0.00 0.00 0.00 4.35
277 289 0.951040 CCAACTCTTGCACCCTCGTC 60.951 60.000 0.00 0.00 0.00 4.20
278 290 1.071471 CCAACTCTTGCACCCTCGT 59.929 57.895 0.00 0.00 0.00 4.18
279 291 0.535102 AACCAACTCTTGCACCCTCG 60.535 55.000 0.00 0.00 0.00 4.63
280 292 0.954452 CAACCAACTCTTGCACCCTC 59.046 55.000 0.00 0.00 0.00 4.30
281 293 0.550914 TCAACCAACTCTTGCACCCT 59.449 50.000 0.00 0.00 0.00 4.34
282 294 1.541588 GATCAACCAACTCTTGCACCC 59.458 52.381 0.00 0.00 0.00 4.61
283 295 2.227388 CAGATCAACCAACTCTTGCACC 59.773 50.000 0.00 0.00 0.00 5.01
284 296 2.351157 GCAGATCAACCAACTCTTGCAC 60.351 50.000 0.00 0.00 0.00 4.57
285 297 1.881973 GCAGATCAACCAACTCTTGCA 59.118 47.619 0.00 0.00 0.00 4.08
286 298 1.135859 CGCAGATCAACCAACTCTTGC 60.136 52.381 0.00 0.00 0.00 4.01
287 299 2.146342 ACGCAGATCAACCAACTCTTG 58.854 47.619 0.00 0.00 0.00 3.02
288 300 2.417719 GACGCAGATCAACCAACTCTT 58.582 47.619 0.00 0.00 0.00 2.85
289 301 1.338200 GGACGCAGATCAACCAACTCT 60.338 52.381 0.00 0.00 0.00 3.24
290 302 1.079503 GGACGCAGATCAACCAACTC 58.920 55.000 0.00 0.00 0.00 3.01
291 303 0.321653 GGGACGCAGATCAACCAACT 60.322 55.000 0.00 0.00 0.00 3.16
292 304 0.605319 TGGGACGCAGATCAACCAAC 60.605 55.000 0.00 0.00 0.00 3.77
293 305 0.109532 TTGGGACGCAGATCAACCAA 59.890 50.000 0.00 0.00 35.78 3.67
294 306 0.605319 GTTGGGACGCAGATCAACCA 60.605 55.000 0.00 0.00 34.97 3.67
295 307 2.171635 GTTGGGACGCAGATCAACC 58.828 57.895 0.00 0.00 34.97 3.77
296 308 0.321653 AGGTTGGGACGCAGATCAAC 60.322 55.000 0.00 0.00 38.84 3.18
297 309 0.321564 CAGGTTGGGACGCAGATCAA 60.322 55.000 0.00 0.00 0.00 2.57
298 310 1.296392 CAGGTTGGGACGCAGATCA 59.704 57.895 0.00 0.00 0.00 2.92
299 311 1.450312 CCAGGTTGGGACGCAGATC 60.450 63.158 0.00 0.00 32.67 2.75
300 312 1.918293 TCCAGGTTGGGACGCAGAT 60.918 57.895 0.00 0.00 38.32 2.90
301 313 2.525629 TCCAGGTTGGGACGCAGA 60.526 61.111 0.00 0.00 38.32 4.26
307 319 2.121963 AGGCAGTCCAGGTTGGGA 60.122 61.111 0.00 0.00 38.32 4.37
308 320 2.034687 CAGGCAGTCCAGGTTGGG 59.965 66.667 0.00 0.00 38.32 4.12
309 321 2.674380 GCAGGCAGTCCAGGTTGG 60.674 66.667 0.00 0.00 39.43 3.77
310 322 1.970114 CAGCAGGCAGTCCAGGTTG 60.970 63.158 0.00 0.00 33.74 3.77
311 323 1.708993 TTCAGCAGGCAGTCCAGGTT 61.709 55.000 0.00 0.00 33.74 3.50
312 324 1.708993 TTTCAGCAGGCAGTCCAGGT 61.709 55.000 0.00 0.00 33.74 4.00
313 325 0.538057 TTTTCAGCAGGCAGTCCAGG 60.538 55.000 0.00 0.00 33.74 4.45
314 326 1.321474 TTTTTCAGCAGGCAGTCCAG 58.679 50.000 0.00 0.00 33.74 3.86
315 327 1.888512 GATTTTTCAGCAGGCAGTCCA 59.111 47.619 0.00 0.00 33.74 4.02
316 328 1.135575 CGATTTTTCAGCAGGCAGTCC 60.136 52.381 0.00 0.00 0.00 3.85
317 329 1.806542 TCGATTTTTCAGCAGGCAGTC 59.193 47.619 0.00 0.00 0.00 3.51
318 330 1.896220 TCGATTTTTCAGCAGGCAGT 58.104 45.000 0.00 0.00 0.00 4.40
319 331 3.176708 CAATCGATTTTTCAGCAGGCAG 58.823 45.455 8.21 0.00 0.00 4.85
320 332 2.671914 GCAATCGATTTTTCAGCAGGCA 60.672 45.455 8.21 0.00 0.00 4.75
321 333 1.922545 GCAATCGATTTTTCAGCAGGC 59.077 47.619 8.21 1.60 0.00 4.85
322 334 2.094597 TGGCAATCGATTTTTCAGCAGG 60.095 45.455 8.21 0.00 0.00 4.85
323 335 2.919229 GTGGCAATCGATTTTTCAGCAG 59.081 45.455 8.21 0.00 0.00 4.24
324 336 2.668001 CGTGGCAATCGATTTTTCAGCA 60.668 45.455 8.21 0.00 0.00 4.41
325 337 1.913403 CGTGGCAATCGATTTTTCAGC 59.087 47.619 8.21 8.37 0.00 4.26
326 338 3.163594 GTCGTGGCAATCGATTTTTCAG 58.836 45.455 8.21 0.00 39.45 3.02
327 339 2.550180 TGTCGTGGCAATCGATTTTTCA 59.450 40.909 8.21 4.41 39.45 2.69
328 340 2.908626 GTGTCGTGGCAATCGATTTTTC 59.091 45.455 8.21 1.70 39.45 2.29
329 341 2.292016 TGTGTCGTGGCAATCGATTTTT 59.708 40.909 8.21 0.00 39.45 1.94
330 342 1.876799 TGTGTCGTGGCAATCGATTTT 59.123 42.857 8.21 0.00 39.45 1.82
331 343 1.518325 TGTGTCGTGGCAATCGATTT 58.482 45.000 8.21 0.00 39.45 2.17
332 344 1.464608 CTTGTGTCGTGGCAATCGATT 59.535 47.619 4.39 4.39 39.45 3.34
333 345 1.078709 CTTGTGTCGTGGCAATCGAT 58.921 50.000 3.45 0.00 39.45 3.59
334 346 1.565156 GCTTGTGTCGTGGCAATCGA 61.565 55.000 0.00 0.00 34.91 3.59
335 347 1.154413 GCTTGTGTCGTGGCAATCG 60.154 57.895 0.00 0.00 0.00 3.34
336 348 1.210155 GGCTTGTGTCGTGGCAATC 59.790 57.895 0.00 0.00 0.00 2.67
337 349 2.268076 GGGCTTGTGTCGTGGCAAT 61.268 57.895 0.00 0.00 0.00 3.56
338 350 2.904866 GGGCTTGTGTCGTGGCAA 60.905 61.111 0.00 0.00 0.00 4.52
339 351 4.182433 TGGGCTTGTGTCGTGGCA 62.182 61.111 0.00 0.00 0.00 4.92
340 352 3.660111 GTGGGCTTGTGTCGTGGC 61.660 66.667 0.00 0.00 0.00 5.01
341 353 3.345808 CGTGGGCTTGTGTCGTGG 61.346 66.667 0.00 0.00 0.00 4.94
342 354 4.012895 GCGTGGGCTTGTGTCGTG 62.013 66.667 0.00 0.00 35.83 4.35
354 366 4.758251 TGACATCCTGCGGCGTGG 62.758 66.667 9.37 11.81 0.00 4.94
355 367 2.040213 GAATGACATCCTGCGGCGTG 62.040 60.000 9.37 0.00 0.00 5.34
356 368 1.815421 GAATGACATCCTGCGGCGT 60.815 57.895 9.37 0.00 0.00 5.68
357 369 2.537560 GGAATGACATCCTGCGGCG 61.538 63.158 0.51 0.51 36.50 6.46
358 370 3.425422 GGAATGACATCCTGCGGC 58.575 61.111 0.00 0.00 36.50 6.53
364 376 4.392940 CATACCCAAGAGGAATGACATCC 58.607 47.826 0.00 0.00 39.89 3.51
365 377 4.141390 ACCATACCCAAGAGGAATGACATC 60.141 45.833 0.00 0.00 39.89 3.06
366 378 3.788142 ACCATACCCAAGAGGAATGACAT 59.212 43.478 0.00 0.00 39.89 3.06
367 379 3.189606 ACCATACCCAAGAGGAATGACA 58.810 45.455 0.00 0.00 39.89 3.58
368 380 3.933861 ACCATACCCAAGAGGAATGAC 57.066 47.619 0.00 0.00 39.89 3.06
369 381 4.946160 AAACCATACCCAAGAGGAATGA 57.054 40.909 0.00 0.00 39.89 2.57
370 382 6.663523 AGTTAAAACCATACCCAAGAGGAATG 59.336 38.462 0.00 0.00 39.89 2.67
371 383 6.663523 CAGTTAAAACCATACCCAAGAGGAAT 59.336 38.462 0.00 0.00 39.89 3.01
372 384 6.007703 CAGTTAAAACCATACCCAAGAGGAA 58.992 40.000 0.00 0.00 39.89 3.36
373 385 5.566469 CAGTTAAAACCATACCCAAGAGGA 58.434 41.667 0.00 0.00 39.89 3.71
374 386 4.157840 GCAGTTAAAACCATACCCAAGAGG 59.842 45.833 0.00 0.00 43.78 3.69
375 387 5.010282 AGCAGTTAAAACCATACCCAAGAG 58.990 41.667 0.00 0.00 0.00 2.85
376 388 4.993028 AGCAGTTAAAACCATACCCAAGA 58.007 39.130 0.00 0.00 0.00 3.02
377 389 5.722021 AAGCAGTTAAAACCATACCCAAG 57.278 39.130 0.00 0.00 0.00 3.61
378 390 7.784470 ATTAAGCAGTTAAAACCATACCCAA 57.216 32.000 0.00 0.00 31.81 4.12
379 391 7.784470 AATTAAGCAGTTAAAACCATACCCA 57.216 32.000 0.00 0.00 31.81 4.51
380 392 9.744468 CATAATTAAGCAGTTAAAACCATACCC 57.256 33.333 0.00 0.00 31.81 3.69
384 396 8.197439 GGCTCATAATTAAGCAGTTAAAACCAT 58.803 33.333 10.53 0.00 40.36 3.55
385 397 7.363443 GGGCTCATAATTAAGCAGTTAAAACCA 60.363 37.037 10.53 0.00 40.36 3.67
386 398 6.978659 GGGCTCATAATTAAGCAGTTAAAACC 59.021 38.462 10.53 0.00 40.36 3.27
387 399 7.543756 TGGGCTCATAATTAAGCAGTTAAAAC 58.456 34.615 10.53 0.00 40.36 2.43
388 400 7.710676 TGGGCTCATAATTAAGCAGTTAAAA 57.289 32.000 10.53 0.00 40.36 1.52
389 401 7.710676 TTGGGCTCATAATTAAGCAGTTAAA 57.289 32.000 10.53 0.00 40.36 1.52
390 402 7.396055 ACTTTGGGCTCATAATTAAGCAGTTAA 59.604 33.333 10.53 0.00 40.36 2.01
391 403 6.889722 ACTTTGGGCTCATAATTAAGCAGTTA 59.110 34.615 10.53 0.00 40.36 2.24
392 404 5.716703 ACTTTGGGCTCATAATTAAGCAGTT 59.283 36.000 10.53 0.00 40.36 3.16
393 405 5.264395 ACTTTGGGCTCATAATTAAGCAGT 58.736 37.500 10.53 3.66 40.36 4.40
394 406 5.841957 ACTTTGGGCTCATAATTAAGCAG 57.158 39.130 10.53 3.15 40.36 4.24
395 407 6.661377 TGTTACTTTGGGCTCATAATTAAGCA 59.339 34.615 10.53 0.00 40.36 3.91
396 408 7.095695 TGTTACTTTGGGCTCATAATTAAGC 57.904 36.000 0.00 1.17 37.80 3.09
397 409 8.070171 CGATGTTACTTTGGGCTCATAATTAAG 58.930 37.037 0.00 0.00 0.00 1.85
398 410 7.554835 ACGATGTTACTTTGGGCTCATAATTAA 59.445 33.333 0.00 0.00 0.00 1.40
399 411 7.051623 ACGATGTTACTTTGGGCTCATAATTA 58.948 34.615 0.00 0.00 0.00 1.40
400 412 5.885912 ACGATGTTACTTTGGGCTCATAATT 59.114 36.000 0.00 0.00 0.00 1.40
401 413 5.437060 ACGATGTTACTTTGGGCTCATAAT 58.563 37.500 0.00 0.00 0.00 1.28
402 414 4.839121 ACGATGTTACTTTGGGCTCATAA 58.161 39.130 0.00 0.00 0.00 1.90
403 415 4.481368 ACGATGTTACTTTGGGCTCATA 57.519 40.909 0.00 0.00 0.00 2.15
404 416 3.350219 ACGATGTTACTTTGGGCTCAT 57.650 42.857 0.00 0.00 0.00 2.90
405 417 2.851263 ACGATGTTACTTTGGGCTCA 57.149 45.000 0.00 0.00 0.00 4.26
406 418 4.023536 TGAAAACGATGTTACTTTGGGCTC 60.024 41.667 0.00 0.00 0.00 4.70
407 419 3.886505 TGAAAACGATGTTACTTTGGGCT 59.113 39.130 0.00 0.00 0.00 5.19
408 420 4.231718 TGAAAACGATGTTACTTTGGGC 57.768 40.909 0.00 0.00 0.00 5.36
409 421 7.145323 AGAAATGAAAACGATGTTACTTTGGG 58.855 34.615 0.00 0.00 0.00 4.12
410 422 8.574196 AAGAAATGAAAACGATGTTACTTTGG 57.426 30.769 0.00 0.00 0.00 3.28
413 425 8.539674 GCAAAAGAAATGAAAACGATGTTACTT 58.460 29.630 0.00 0.00 0.00 2.24
414 426 7.704472 TGCAAAAGAAATGAAAACGATGTTACT 59.296 29.630 0.00 0.00 0.00 2.24
415 427 7.836512 TGCAAAAGAAATGAAAACGATGTTAC 58.163 30.769 0.00 0.00 0.00 2.50
416 428 7.993821 TGCAAAAGAAATGAAAACGATGTTA 57.006 28.000 0.00 0.00 0.00 2.41
417 429 6.900568 TGCAAAAGAAATGAAAACGATGTT 57.099 29.167 0.00 0.00 0.00 2.71
418 430 6.900568 TTGCAAAAGAAATGAAAACGATGT 57.099 29.167 0.00 0.00 0.00 3.06
419 431 8.675016 CAAATTGCAAAAGAAATGAAAACGATG 58.325 29.630 1.71 0.00 0.00 3.84
420 432 8.610896 TCAAATTGCAAAAGAAATGAAAACGAT 58.389 25.926 1.71 0.00 0.00 3.73
421 433 7.902403 GTCAAATTGCAAAAGAAATGAAAACGA 59.098 29.630 1.71 0.00 0.00 3.85
422 434 7.164008 GGTCAAATTGCAAAAGAAATGAAAACG 59.836 33.333 1.71 0.00 0.00 3.60
423 435 7.967303 TGGTCAAATTGCAAAAGAAATGAAAAC 59.033 29.630 1.71 0.00 0.00 2.43
424 436 7.967303 GTGGTCAAATTGCAAAAGAAATGAAAA 59.033 29.630 1.71 0.00 0.00 2.29
425 437 7.120285 TGTGGTCAAATTGCAAAAGAAATGAAA 59.880 29.630 1.71 0.00 0.00 2.69
426 438 6.596888 TGTGGTCAAATTGCAAAAGAAATGAA 59.403 30.769 1.71 0.00 0.00 2.57
427 439 6.111382 TGTGGTCAAATTGCAAAAGAAATGA 58.889 32.000 1.71 0.00 0.00 2.57
428 440 6.360844 TGTGGTCAAATTGCAAAAGAAATG 57.639 33.333 1.71 0.00 0.00 2.32
429 441 7.571080 AATGTGGTCAAATTGCAAAAGAAAT 57.429 28.000 1.71 0.00 0.00 2.17
430 442 6.998968 AATGTGGTCAAATTGCAAAAGAAA 57.001 29.167 1.71 0.00 0.00 2.52
431 443 7.224362 CAGTAATGTGGTCAAATTGCAAAAGAA 59.776 33.333 1.71 0.00 0.00 2.52
432 444 6.700960 CAGTAATGTGGTCAAATTGCAAAAGA 59.299 34.615 1.71 0.00 0.00 2.52
433 445 6.700960 TCAGTAATGTGGTCAAATTGCAAAAG 59.299 34.615 1.71 0.00 0.00 2.27
434 446 6.478344 GTCAGTAATGTGGTCAAATTGCAAAA 59.522 34.615 1.71 0.00 0.00 2.44
435 447 5.982516 GTCAGTAATGTGGTCAAATTGCAAA 59.017 36.000 1.71 0.00 0.00 3.68
436 448 5.508825 GGTCAGTAATGTGGTCAAATTGCAA 60.509 40.000 0.00 0.00 0.00 4.08
437 449 4.022416 GGTCAGTAATGTGGTCAAATTGCA 60.022 41.667 5.10 0.00 0.00 4.08
438 450 4.022416 TGGTCAGTAATGTGGTCAAATTGC 60.022 41.667 0.00 0.00 0.00 3.56
439 451 5.702865 CTGGTCAGTAATGTGGTCAAATTG 58.297 41.667 0.00 0.00 0.00 2.32
440 452 4.218417 GCTGGTCAGTAATGTGGTCAAATT 59.782 41.667 0.00 0.00 0.00 1.82
441 453 3.758554 GCTGGTCAGTAATGTGGTCAAAT 59.241 43.478 0.00 0.00 0.00 2.32
442 454 3.146066 GCTGGTCAGTAATGTGGTCAAA 58.854 45.455 0.00 0.00 0.00 2.69
443 455 2.105649 TGCTGGTCAGTAATGTGGTCAA 59.894 45.455 0.00 0.00 0.00 3.18
444 456 1.696884 TGCTGGTCAGTAATGTGGTCA 59.303 47.619 0.00 0.00 0.00 4.02
445 457 2.472695 TGCTGGTCAGTAATGTGGTC 57.527 50.000 0.00 0.00 0.00 4.02
446 458 3.678806 CGTATGCTGGTCAGTAATGTGGT 60.679 47.826 0.00 0.00 0.00 4.16
447 459 2.866156 CGTATGCTGGTCAGTAATGTGG 59.134 50.000 0.00 0.00 0.00 4.17
448 460 2.285220 GCGTATGCTGGTCAGTAATGTG 59.715 50.000 0.00 0.00 38.39 3.21
449 461 2.093711 TGCGTATGCTGGTCAGTAATGT 60.094 45.455 8.69 0.00 43.34 2.71
450 462 2.549926 TGCGTATGCTGGTCAGTAATG 58.450 47.619 8.69 0.00 43.34 1.90
451 463 2.979814 TGCGTATGCTGGTCAGTAAT 57.020 45.000 8.69 0.00 43.34 1.89
452 464 2.753055 TTGCGTATGCTGGTCAGTAA 57.247 45.000 8.69 0.00 43.34 2.24
453 465 2.979814 ATTGCGTATGCTGGTCAGTA 57.020 45.000 8.69 0.00 43.34 2.74
454 466 2.113860 AATTGCGTATGCTGGTCAGT 57.886 45.000 8.69 0.00 43.34 3.41
455 467 2.419673 TCAAATTGCGTATGCTGGTCAG 59.580 45.455 8.69 0.00 43.34 3.51
456 468 2.161410 GTCAAATTGCGTATGCTGGTCA 59.839 45.455 8.69 0.00 43.34 4.02
457 469 2.477863 GGTCAAATTGCGTATGCTGGTC 60.478 50.000 8.69 0.00 43.34 4.02
458 470 1.472480 GGTCAAATTGCGTATGCTGGT 59.528 47.619 8.69 0.00 43.34 4.00
459 471 1.472082 TGGTCAAATTGCGTATGCTGG 59.528 47.619 8.69 0.00 43.34 4.85
460 472 2.095314 TGTGGTCAAATTGCGTATGCTG 60.095 45.455 8.69 0.00 43.34 4.41
461 473 2.158559 TGTGGTCAAATTGCGTATGCT 58.841 42.857 8.69 0.00 43.34 3.79
462 474 2.627863 TGTGGTCAAATTGCGTATGC 57.372 45.000 0.00 0.00 43.20 3.14
463 475 5.738693 CAGTAATGTGGTCAAATTGCGTATG 59.261 40.000 0.00 0.00 0.00 2.39
464 476 5.645929 TCAGTAATGTGGTCAAATTGCGTAT 59.354 36.000 0.00 0.00 0.00 3.06
465 477 4.998033 TCAGTAATGTGGTCAAATTGCGTA 59.002 37.500 0.00 0.00 0.00 4.42
466 478 3.818210 TCAGTAATGTGGTCAAATTGCGT 59.182 39.130 0.00 0.00 0.00 5.24
467 479 4.158384 GTCAGTAATGTGGTCAAATTGCG 58.842 43.478 0.00 0.00 0.00 4.85
468 480 4.022416 TGGTCAGTAATGTGGTCAAATTGC 60.022 41.667 0.00 0.00 0.00 3.56
469 481 5.702865 CTGGTCAGTAATGTGGTCAAATTG 58.297 41.667 0.00 0.00 0.00 2.32
470 482 4.218417 GCTGGTCAGTAATGTGGTCAAATT 59.782 41.667 0.00 0.00 0.00 1.82
471 483 3.758554 GCTGGTCAGTAATGTGGTCAAAT 59.241 43.478 0.00 0.00 0.00 2.32
472 484 3.146066 GCTGGTCAGTAATGTGGTCAAA 58.854 45.455 0.00 0.00 0.00 2.69
473 485 2.105649 TGCTGGTCAGTAATGTGGTCAA 59.894 45.455 0.00 0.00 0.00 3.18
474 486 1.696884 TGCTGGTCAGTAATGTGGTCA 59.303 47.619 0.00 0.00 0.00 4.02
475 487 2.472695 TGCTGGTCAGTAATGTGGTC 57.527 50.000 0.00 0.00 0.00 4.02
476 488 3.519510 AGTATGCTGGTCAGTAATGTGGT 59.480 43.478 0.00 0.00 0.00 4.16
477 489 3.873361 CAGTATGCTGGTCAGTAATGTGG 59.127 47.826 2.35 0.00 39.01 4.17
478 490 4.568359 GTCAGTATGCTGGTCAGTAATGTG 59.432 45.833 11.15 0.00 42.78 3.21
479 491 4.383118 GGTCAGTATGCTGGTCAGTAATGT 60.383 45.833 11.15 0.00 42.78 2.71
480 492 4.122776 GGTCAGTATGCTGGTCAGTAATG 58.877 47.826 11.15 0.00 42.78 1.90
481 493 3.774766 TGGTCAGTATGCTGGTCAGTAAT 59.225 43.478 11.15 0.00 42.78 1.89
482 494 3.169908 TGGTCAGTATGCTGGTCAGTAA 58.830 45.455 11.15 0.00 42.78 2.24
483 495 2.760650 CTGGTCAGTATGCTGGTCAGTA 59.239 50.000 11.15 0.00 42.78 2.74
484 496 1.552337 CTGGTCAGTATGCTGGTCAGT 59.448 52.381 11.15 0.00 42.78 3.41
485 497 1.741732 GCTGGTCAGTATGCTGGTCAG 60.742 57.143 20.79 20.79 42.78 3.51
486 498 0.250234 GCTGGTCAGTATGCTGGTCA 59.750 55.000 11.15 8.55 42.78 4.02
487 499 0.539051 AGCTGGTCAGTATGCTGGTC 59.461 55.000 11.15 4.88 42.78 4.02
488 500 0.987294 AAGCTGGTCAGTATGCTGGT 59.013 50.000 11.15 0.00 42.78 4.00
489 501 2.555199 GTAAGCTGGTCAGTATGCTGG 58.445 52.381 11.15 0.00 42.78 4.85
490 502 2.196749 CGTAAGCTGGTCAGTATGCTG 58.803 52.381 4.14 4.14 43.87 4.41
491 503 1.137086 CCGTAAGCTGGTCAGTATGCT 59.863 52.381 0.00 0.00 37.37 3.79
492 504 1.571919 CCGTAAGCTGGTCAGTATGC 58.428 55.000 0.00 0.00 34.76 3.14
493 505 1.202533 CCCCGTAAGCTGGTCAGTATG 60.203 57.143 0.00 0.00 37.54 2.39
494 506 1.120530 CCCCGTAAGCTGGTCAGTAT 58.879 55.000 0.00 0.00 0.00 2.12
495 507 0.974010 CCCCCGTAAGCTGGTCAGTA 60.974 60.000 0.00 0.00 0.00 2.74
496 508 2.291043 CCCCCGTAAGCTGGTCAGT 61.291 63.158 0.00 0.00 0.00 3.41
497 509 2.291043 ACCCCCGTAAGCTGGTCAG 61.291 63.158 0.00 0.00 35.12 3.51
498 510 2.203877 ACCCCCGTAAGCTGGTCA 60.204 61.111 0.00 0.00 35.12 4.02
499 511 2.582978 GACCCCCGTAAGCTGGTC 59.417 66.667 3.15 3.15 45.13 4.02
500 512 1.988406 GAGACCCCCGTAAGCTGGT 60.988 63.158 0.00 0.00 41.61 4.00
501 513 1.961180 CTGAGACCCCCGTAAGCTGG 61.961 65.000 0.00 0.00 0.00 4.85
502 514 0.970937 TCTGAGACCCCCGTAAGCTG 60.971 60.000 0.00 0.00 0.00 4.24
503 515 0.684805 CTCTGAGACCCCCGTAAGCT 60.685 60.000 0.00 0.00 0.00 3.74
504 516 0.683504 TCTCTGAGACCCCCGTAAGC 60.684 60.000 2.58 0.00 0.00 3.09
505 517 2.074729 ATCTCTGAGACCCCCGTAAG 57.925 55.000 10.00 0.00 0.00 2.34
506 518 2.423947 GGTATCTCTGAGACCCCCGTAA 60.424 54.545 10.00 0.00 37.91 3.18
507 519 1.144503 GGTATCTCTGAGACCCCCGTA 59.855 57.143 10.00 0.00 37.91 4.02
508 520 0.106116 GGTATCTCTGAGACCCCCGT 60.106 60.000 10.00 0.00 37.91 5.28
509 521 1.173444 CGGTATCTCTGAGACCCCCG 61.173 65.000 20.12 20.12 40.44 5.73
510 522 0.828343 CCGGTATCTCTGAGACCCCC 60.828 65.000 10.00 8.99 40.44 5.40
511 523 0.185416 TCCGGTATCTCTGAGACCCC 59.815 60.000 10.00 11.42 40.44 4.95
512 524 1.611519 CTCCGGTATCTCTGAGACCC 58.388 60.000 10.00 11.77 40.44 4.46
513 525 1.143277 TCCTCCGGTATCTCTGAGACC 59.857 57.143 10.00 7.48 40.18 3.85
514 526 2.642154 TCCTCCGGTATCTCTGAGAC 57.358 55.000 10.00 0.00 0.00 3.36
515 527 2.778270 TCTTCCTCCGGTATCTCTGAGA 59.222 50.000 10.23 10.23 0.00 3.27
516 528 3.146066 CTCTTCCTCCGGTATCTCTGAG 58.854 54.545 0.00 0.00 0.00 3.35
517 529 2.778270 TCTCTTCCTCCGGTATCTCTGA 59.222 50.000 0.00 0.00 0.00 3.27
518 530 3.146066 CTCTCTTCCTCCGGTATCTCTG 58.854 54.545 0.00 0.00 0.00 3.35
519 531 2.781174 ACTCTCTTCCTCCGGTATCTCT 59.219 50.000 0.00 0.00 0.00 3.10
520 532 3.143728 GACTCTCTTCCTCCGGTATCTC 58.856 54.545 0.00 0.00 0.00 2.75
521 533 2.510382 TGACTCTCTTCCTCCGGTATCT 59.490 50.000 0.00 0.00 0.00 1.98
522 534 2.933573 TGACTCTCTTCCTCCGGTATC 58.066 52.381 0.00 0.00 0.00 2.24
523 535 3.025262 GTTGACTCTCTTCCTCCGGTAT 58.975 50.000 0.00 0.00 0.00 2.73
524 536 2.444421 GTTGACTCTCTTCCTCCGGTA 58.556 52.381 0.00 0.00 0.00 4.02
525 537 1.258676 GTTGACTCTCTTCCTCCGGT 58.741 55.000 0.00 0.00 0.00 5.28
526 538 0.533032 GGTTGACTCTCTTCCTCCGG 59.467 60.000 0.00 0.00 0.00 5.14
527 539 1.257743 TGGTTGACTCTCTTCCTCCG 58.742 55.000 0.00 0.00 0.00 4.63
528 540 4.682050 GCTTATGGTTGACTCTCTTCCTCC 60.682 50.000 0.00 0.00 0.00 4.30
529 541 4.438148 GCTTATGGTTGACTCTCTTCCTC 58.562 47.826 0.00 0.00 0.00 3.71
530 542 3.198853 GGCTTATGGTTGACTCTCTTCCT 59.801 47.826 0.00 0.00 0.00 3.36
531 543 3.055094 TGGCTTATGGTTGACTCTCTTCC 60.055 47.826 0.00 0.00 0.00 3.46
532 544 4.187694 CTGGCTTATGGTTGACTCTCTTC 58.812 47.826 0.00 0.00 0.00 2.87
533 545 3.620966 GCTGGCTTATGGTTGACTCTCTT 60.621 47.826 0.00 0.00 0.00 2.85
534 546 2.093235 GCTGGCTTATGGTTGACTCTCT 60.093 50.000 0.00 0.00 0.00 3.10
535 547 2.284190 GCTGGCTTATGGTTGACTCTC 58.716 52.381 0.00 0.00 0.00 3.20
536 548 1.630369 TGCTGGCTTATGGTTGACTCT 59.370 47.619 0.00 0.00 0.00 3.24
537 549 2.113860 TGCTGGCTTATGGTTGACTC 57.886 50.000 0.00 0.00 0.00 3.36
538 550 2.291153 ACATGCTGGCTTATGGTTGACT 60.291 45.455 0.00 0.00 0.00 3.41
539 551 2.094675 ACATGCTGGCTTATGGTTGAC 58.905 47.619 0.00 0.00 0.00 3.18
540 552 2.093890 CACATGCTGGCTTATGGTTGA 58.906 47.619 0.00 0.00 0.00 3.18
541 553 2.093890 TCACATGCTGGCTTATGGTTG 58.906 47.619 0.00 0.00 0.00 3.77
542 554 2.512692 TCACATGCTGGCTTATGGTT 57.487 45.000 0.00 0.00 0.00 3.67
543 555 2.174210 AGATCACATGCTGGCTTATGGT 59.826 45.455 0.00 0.00 0.00 3.55
544 556 2.812591 GAGATCACATGCTGGCTTATGG 59.187 50.000 0.00 0.00 0.00 2.74
545 557 2.479275 CGAGATCACATGCTGGCTTATG 59.521 50.000 0.00 0.00 0.00 1.90
546 558 2.763933 CGAGATCACATGCTGGCTTAT 58.236 47.619 0.00 0.00 0.00 1.73
547 559 1.807755 GCGAGATCACATGCTGGCTTA 60.808 52.381 0.00 0.00 33.74 3.09
548 560 1.094073 GCGAGATCACATGCTGGCTT 61.094 55.000 0.00 0.00 33.74 4.35
549 561 1.523258 GCGAGATCACATGCTGGCT 60.523 57.895 0.00 0.00 33.74 4.75
550 562 2.879070 CGCGAGATCACATGCTGGC 61.879 63.158 0.00 0.00 33.28 4.85
551 563 0.249031 TACGCGAGATCACATGCTGG 60.249 55.000 15.93 0.00 0.00 4.85
552 564 1.775869 ATACGCGAGATCACATGCTG 58.224 50.000 15.93 0.00 0.00 4.41
553 565 2.515926 AATACGCGAGATCACATGCT 57.484 45.000 15.93 0.00 0.00 3.79
554 566 3.242413 ACAAAATACGCGAGATCACATGC 60.242 43.478 15.93 0.00 0.00 4.06
555 567 4.520743 ACAAAATACGCGAGATCACATG 57.479 40.909 15.93 3.70 0.00 3.21
556 568 4.870426 AGAACAAAATACGCGAGATCACAT 59.130 37.500 15.93 0.00 0.00 3.21
557 569 4.242475 AGAACAAAATACGCGAGATCACA 58.758 39.130 15.93 0.00 0.00 3.58
558 570 4.842139 AGAACAAAATACGCGAGATCAC 57.158 40.909 15.93 0.00 0.00 3.06
559 571 5.287752 GTGTAGAACAAAATACGCGAGATCA 59.712 40.000 15.93 0.00 0.00 2.92
560 572 5.287752 TGTGTAGAACAAAATACGCGAGATC 59.712 40.000 15.93 0.00 35.24 2.75
561 573 5.165676 TGTGTAGAACAAAATACGCGAGAT 58.834 37.500 15.93 2.02 35.24 2.75
562 574 4.548494 TGTGTAGAACAAAATACGCGAGA 58.452 39.130 15.93 0.00 35.24 4.04
563 575 4.896562 TGTGTAGAACAAAATACGCGAG 57.103 40.909 15.93 0.00 35.24 5.03
573 585 5.617528 TTGGTACCTCTTGTGTAGAACAA 57.382 39.130 14.36 0.00 46.66 2.83
574 586 5.104859 TGTTTGGTACCTCTTGTGTAGAACA 60.105 40.000 14.36 5.85 36.85 3.18
575 587 5.235831 GTGTTTGGTACCTCTTGTGTAGAAC 59.764 44.000 14.36 3.61 30.91 3.01
576 588 5.104859 TGTGTTTGGTACCTCTTGTGTAGAA 60.105 40.000 14.36 0.00 30.91 2.10
577 589 4.406326 TGTGTTTGGTACCTCTTGTGTAGA 59.594 41.667 14.36 0.00 0.00 2.59
578 590 4.699637 TGTGTTTGGTACCTCTTGTGTAG 58.300 43.478 14.36 0.00 0.00 2.74
579 591 4.443739 CCTGTGTTTGGTACCTCTTGTGTA 60.444 45.833 14.36 0.00 0.00 2.90
580 592 3.541632 CTGTGTTTGGTACCTCTTGTGT 58.458 45.455 14.36 0.00 0.00 3.72
581 593 2.878406 CCTGTGTTTGGTACCTCTTGTG 59.122 50.000 14.36 0.00 0.00 3.33
582 594 2.775384 TCCTGTGTTTGGTACCTCTTGT 59.225 45.455 14.36 0.00 0.00 3.16
583 595 3.485463 TCCTGTGTTTGGTACCTCTTG 57.515 47.619 14.36 0.00 0.00 3.02
584 596 4.724279 AATCCTGTGTTTGGTACCTCTT 57.276 40.909 14.36 0.00 0.00 2.85
585 597 4.351111 AGAAATCCTGTGTTTGGTACCTCT 59.649 41.667 14.36 0.00 0.00 3.69
586 598 4.455877 CAGAAATCCTGTGTTTGGTACCTC 59.544 45.833 14.36 4.50 38.10 3.85
587 599 4.398319 CAGAAATCCTGTGTTTGGTACCT 58.602 43.478 14.36 0.00 38.10 3.08
588 600 4.766404 CAGAAATCCTGTGTTTGGTACC 57.234 45.455 4.43 4.43 38.10 3.34
600 612 4.713792 AGGACACAAAGACAGAAATCCT 57.286 40.909 0.00 0.00 0.00 3.24
601 613 5.532779 AGAAAGGACACAAAGACAGAAATCC 59.467 40.000 0.00 0.00 0.00 3.01
602 614 6.625873 AGAAAGGACACAAAGACAGAAATC 57.374 37.500 0.00 0.00 0.00 2.17
603 615 8.697507 ATAAGAAAGGACACAAAGACAGAAAT 57.302 30.769 0.00 0.00 0.00 2.17
604 616 7.042051 CGATAAGAAAGGACACAAAGACAGAAA 60.042 37.037 0.00 0.00 0.00 2.52
605 617 6.423905 CGATAAGAAAGGACACAAAGACAGAA 59.576 38.462 0.00 0.00 0.00 3.02
606 618 5.926542 CGATAAGAAAGGACACAAAGACAGA 59.073 40.000 0.00 0.00 0.00 3.41
607 619 5.926542 TCGATAAGAAAGGACACAAAGACAG 59.073 40.000 0.00 0.00 0.00 3.51
608 620 5.849510 TCGATAAGAAAGGACACAAAGACA 58.150 37.500 0.00 0.00 0.00 3.41
609 621 6.157211 TCTCGATAAGAAAGGACACAAAGAC 58.843 40.000 0.00 0.00 0.00 3.01
610 622 6.340962 TCTCGATAAGAAAGGACACAAAGA 57.659 37.500 0.00 0.00 0.00 2.52
611 623 7.602517 ATTCTCGATAAGAAAGGACACAAAG 57.397 36.000 0.00 0.00 46.85 2.77
612 624 9.098355 CATATTCTCGATAAGAAAGGACACAAA 57.902 33.333 0.00 0.00 46.85 2.83
613 625 7.224753 GCATATTCTCGATAAGAAAGGACACAA 59.775 37.037 0.00 0.00 46.85 3.33
614 626 6.701841 GCATATTCTCGATAAGAAAGGACACA 59.298 38.462 0.00 0.00 46.85 3.72
615 627 6.129062 CGCATATTCTCGATAAGAAAGGACAC 60.129 42.308 0.00 0.00 46.85 3.67
616 628 5.920840 CGCATATTCTCGATAAGAAAGGACA 59.079 40.000 0.00 0.00 46.85 4.02
617 629 6.150318 TCGCATATTCTCGATAAGAAAGGAC 58.850 40.000 0.00 0.00 46.85 3.85
618 630 6.327279 TCGCATATTCTCGATAAGAAAGGA 57.673 37.500 0.00 0.00 46.85 3.36
619 631 8.864069 ATATCGCATATTCTCGATAAGAAAGG 57.136 34.615 12.58 0.00 46.85 3.11
620 632 9.508567 TGATATCGCATATTCTCGATAAGAAAG 57.491 33.333 12.58 0.00 46.85 2.62
622 634 9.670719 GATGATATCGCATATTCTCGATAAGAA 57.329 33.333 12.58 0.00 46.46 2.52
623 635 8.840321 TGATGATATCGCATATTCTCGATAAGA 58.160 33.333 12.58 5.96 46.46 2.10
624 636 9.455847 TTGATGATATCGCATATTCTCGATAAG 57.544 33.333 12.58 0.00 46.46 1.73
625 637 9.237846 GTTGATGATATCGCATATTCTCGATAA 57.762 33.333 12.58 0.00 46.46 1.75
627 639 7.260603 TGTTGATGATATCGCATATTCTCGAT 58.739 34.615 0.00 8.66 45.87 3.59
628 640 6.620678 TGTTGATGATATCGCATATTCTCGA 58.379 36.000 0.00 0.00 39.17 4.04
629 641 6.875926 TGTTGATGATATCGCATATTCTCG 57.124 37.500 0.00 0.00 0.00 4.04
634 646 9.218440 TGTGTAAATGTTGATGATATCGCATAT 57.782 29.630 0.00 0.00 30.80 1.78
635 647 8.600449 TGTGTAAATGTTGATGATATCGCATA 57.400 30.769 0.00 0.00 30.80 3.14
636 648 7.495135 TGTGTAAATGTTGATGATATCGCAT 57.505 32.000 0.00 0.00 31.78 4.73
637 649 6.917217 TGTGTAAATGTTGATGATATCGCA 57.083 33.333 0.00 0.00 0.00 5.10
638 650 8.786937 ATTTGTGTAAATGTTGATGATATCGC 57.213 30.769 0.00 0.00 35.26 4.58
644 656 9.474920 GAAAGGAATTTGTGTAAATGTTGATGA 57.525 29.630 0.00 0.00 36.65 2.92
645 657 9.480053 AGAAAGGAATTTGTGTAAATGTTGATG 57.520 29.630 0.00 0.00 36.65 3.07
646 658 9.696917 GAGAAAGGAATTTGTGTAAATGTTGAT 57.303 29.630 0.00 0.00 36.65 2.57
647 659 8.141268 GGAGAAAGGAATTTGTGTAAATGTTGA 58.859 33.333 0.00 0.00 36.65 3.18
648 660 8.143835 AGGAGAAAGGAATTTGTGTAAATGTTG 58.856 33.333 0.00 0.00 36.65 3.33
649 661 8.143835 CAGGAGAAAGGAATTTGTGTAAATGTT 58.856 33.333 0.00 0.00 36.65 2.71
650 662 7.287696 ACAGGAGAAAGGAATTTGTGTAAATGT 59.712 33.333 0.00 0.00 36.65 2.71
651 663 7.596248 CACAGGAGAAAGGAATTTGTGTAAATG 59.404 37.037 0.00 0.00 36.65 2.32
652 664 7.661040 CACAGGAGAAAGGAATTTGTGTAAAT 58.339 34.615 0.00 0.00 38.11 1.40
653 665 6.460953 GCACAGGAGAAAGGAATTTGTGTAAA 60.461 38.462 4.00 0.00 37.39 2.01
654 666 5.009610 GCACAGGAGAAAGGAATTTGTGTAA 59.990 40.000 4.00 0.00 37.39 2.41
655 667 4.518970 GCACAGGAGAAAGGAATTTGTGTA 59.481 41.667 4.00 0.00 37.39 2.90
656 668 3.319122 GCACAGGAGAAAGGAATTTGTGT 59.681 43.478 4.00 0.00 37.39 3.72
657 669 3.318839 TGCACAGGAGAAAGGAATTTGTG 59.681 43.478 0.00 0.00 37.93 3.33
658 670 3.565307 TGCACAGGAGAAAGGAATTTGT 58.435 40.909 0.00 0.00 0.00 2.83
659 671 4.170292 CTGCACAGGAGAAAGGAATTTG 57.830 45.455 0.00 0.00 0.00 2.32
677 689 0.035458 ACTAATATCGGGCAGCCTGC 59.965 55.000 16.48 8.55 44.08 4.85
678 690 2.549754 CAAACTAATATCGGGCAGCCTG 59.450 50.000 15.05 15.05 0.00 4.85
679 691 2.487265 CCAAACTAATATCGGGCAGCCT 60.487 50.000 12.43 0.00 0.00 4.58
680 692 1.880027 CCAAACTAATATCGGGCAGCC 59.120 52.381 1.26 1.26 0.00 4.85
681 693 2.290641 CACCAAACTAATATCGGGCAGC 59.709 50.000 0.00 0.00 0.00 5.25
682 694 2.290641 GCACCAAACTAATATCGGGCAG 59.709 50.000 0.00 0.00 0.00 4.85
683 695 2.294074 GCACCAAACTAATATCGGGCA 58.706 47.619 0.00 0.00 0.00 5.36
684 696 1.607148 GGCACCAAACTAATATCGGGC 59.393 52.381 0.00 0.00 0.00 6.13
685 697 2.878406 CTGGCACCAAACTAATATCGGG 59.122 50.000 0.00 0.00 0.00 5.14
686 698 3.560068 GTCTGGCACCAAACTAATATCGG 59.440 47.826 0.00 0.00 0.00 4.18
687 699 4.271049 CAGTCTGGCACCAAACTAATATCG 59.729 45.833 0.00 0.00 0.00 2.92
688 700 4.035675 GCAGTCTGGCACCAAACTAATATC 59.964 45.833 1.14 0.00 0.00 1.63
689 701 3.947834 GCAGTCTGGCACCAAACTAATAT 59.052 43.478 1.14 0.00 0.00 1.28
690 702 3.343617 GCAGTCTGGCACCAAACTAATA 58.656 45.455 1.14 0.00 0.00 0.98
691 703 2.162681 GCAGTCTGGCACCAAACTAAT 58.837 47.619 1.14 0.00 0.00 1.73
692 704 1.604604 GCAGTCTGGCACCAAACTAA 58.395 50.000 1.14 0.00 0.00 2.24
693 705 0.250727 GGCAGTCTGGCACCAAACTA 60.251 55.000 20.87 0.00 43.14 2.24
694 706 1.529244 GGCAGTCTGGCACCAAACT 60.529 57.895 20.87 0.00 43.14 2.66
695 707 3.042560 GGCAGTCTGGCACCAAAC 58.957 61.111 20.87 0.00 43.14 2.93
702 714 2.409948 AGAATTAGTGGCAGTCTGGC 57.590 50.000 19.16 19.16 44.03 4.85
703 715 2.932614 CGAAGAATTAGTGGCAGTCTGG 59.067 50.000 0.00 0.00 0.00 3.86
704 716 3.369147 CACGAAGAATTAGTGGCAGTCTG 59.631 47.826 0.00 0.00 46.10 3.51
705 717 3.589988 CACGAAGAATTAGTGGCAGTCT 58.410 45.455 0.00 0.00 46.10 3.24
706 718 3.999229 CACGAAGAATTAGTGGCAGTC 57.001 47.619 0.00 0.00 46.10 3.51
713 725 4.642429 AGTTTCAGCCACGAAGAATTAGT 58.358 39.130 0.00 0.00 32.87 2.24
714 726 5.869888 ACTAGTTTCAGCCACGAAGAATTAG 59.130 40.000 0.00 0.00 0.00 1.73
715 727 5.790593 ACTAGTTTCAGCCACGAAGAATTA 58.209 37.500 0.00 0.00 0.00 1.40
716 728 4.642429 ACTAGTTTCAGCCACGAAGAATT 58.358 39.130 0.00 0.00 0.00 2.17
717 729 4.273148 ACTAGTTTCAGCCACGAAGAAT 57.727 40.909 0.00 0.00 0.00 2.40
718 730 3.746045 ACTAGTTTCAGCCACGAAGAA 57.254 42.857 0.00 0.00 0.00 2.52
719 731 3.746045 AACTAGTTTCAGCCACGAAGA 57.254 42.857 1.12 0.00 0.00 2.87
720 732 3.807622 TCAAACTAGTTTCAGCCACGAAG 59.192 43.478 18.00 3.55 0.00 3.79
721 733 3.799366 TCAAACTAGTTTCAGCCACGAA 58.201 40.909 18.00 0.00 0.00 3.85
722 734 3.462483 TCAAACTAGTTTCAGCCACGA 57.538 42.857 18.00 7.90 0.00 4.35
723 735 4.279659 GTTTCAAACTAGTTTCAGCCACG 58.720 43.478 18.00 5.65 0.00 4.94
724 736 4.607955 GGTTTCAAACTAGTTTCAGCCAC 58.392 43.478 18.00 10.14 0.00 5.01
725 737 3.314080 CGGTTTCAAACTAGTTTCAGCCA 59.686 43.478 18.00 0.00 0.00 4.75
726 738 3.304458 CCGGTTTCAAACTAGTTTCAGCC 60.304 47.826 18.00 16.32 0.00 4.85
727 739 3.562557 TCCGGTTTCAAACTAGTTTCAGC 59.437 43.478 18.00 12.84 0.00 4.26
728 740 5.701290 AGATCCGGTTTCAAACTAGTTTCAG 59.299 40.000 18.00 8.48 0.00 3.02
729 741 5.617252 AGATCCGGTTTCAAACTAGTTTCA 58.383 37.500 18.00 2.19 0.00 2.69
730 742 6.427242 AGAAGATCCGGTTTCAAACTAGTTTC 59.573 38.462 18.00 7.02 0.00 2.78
731 743 6.296803 AGAAGATCCGGTTTCAAACTAGTTT 58.703 36.000 15.22 15.22 0.00 2.66
732 744 5.866207 AGAAGATCCGGTTTCAAACTAGTT 58.134 37.500 1.12 1.12 0.00 2.24
733 745 5.485209 AGAAGATCCGGTTTCAAACTAGT 57.515 39.130 0.00 0.00 0.00 2.57
734 746 6.803154 AAAGAAGATCCGGTTTCAAACTAG 57.197 37.500 0.00 0.00 0.00 2.57
735 747 7.067737 ACAAAAAGAAGATCCGGTTTCAAACTA 59.932 33.333 0.00 0.00 0.00 2.24
736 748 6.127451 ACAAAAAGAAGATCCGGTTTCAAACT 60.127 34.615 0.00 0.00 0.00 2.66
737 749 6.040247 ACAAAAAGAAGATCCGGTTTCAAAC 58.960 36.000 0.00 0.00 0.00 2.93
738 750 6.215495 ACAAAAAGAAGATCCGGTTTCAAA 57.785 33.333 0.00 0.00 0.00 2.69
739 751 5.845391 ACAAAAAGAAGATCCGGTTTCAA 57.155 34.783 0.00 0.00 0.00 2.69
740 752 5.845391 AACAAAAAGAAGATCCGGTTTCA 57.155 34.783 0.00 0.00 0.00 2.69
919 933 2.011947 GCCCCTAGATTAAAACGCGTT 58.988 47.619 20.79 20.79 0.00 4.84
1600 1802 3.974757 ATAGCTACCGCCGCCGTC 61.975 66.667 0.00 0.00 36.60 4.79
1859 2061 5.362105 AAATATTTCAGTGCCTACCGGTA 57.638 39.130 14.95 14.95 0.00 4.02
1952 2154 4.332819 GCAGTACCGAAATATTTCAGTGCT 59.667 41.667 25.27 23.90 39.86 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.