Multiple sequence alignment - TraesCS5B01G095700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G095700 chr5B 100.000 9059 0 0 1 9059 126254891 126245833 0.000000e+00 16729.0
1 TraesCS5B01G095700 chr5B 95.296 829 27 5 2717 3539 388804350 388803528 0.000000e+00 1304.0
2 TraesCS5B01G095700 chr5B 89.115 836 47 21 2716 3536 13615035 13614229 0.000000e+00 1000.0
3 TraesCS5B01G095700 chr5B 88.743 835 52 20 2716 3536 13647770 13646964 0.000000e+00 983.0
4 TraesCS5B01G095700 chr5B 88.626 844 44 22 2716 3540 546903797 546904607 0.000000e+00 979.0
5 TraesCS5B01G095700 chr5B 81.001 879 122 24 4952 5801 126296838 126295976 0.000000e+00 656.0
6 TraesCS5B01G095700 chr5B 97.143 385 11 0 1 385 35305971 35306355 0.000000e+00 651.0
7 TraesCS5B01G095700 chr5B 76.256 1234 200 48 6448 7629 126295533 126294341 3.670000e-158 569.0
8 TraesCS5B01G095700 chr5D 97.812 5530 77 16 3536 9059 114901106 114895615 0.000000e+00 9502.0
9 TraesCS5B01G095700 chr5D 93.984 881 12 9 1866 2717 114901974 114901106 0.000000e+00 1295.0
10 TraesCS5B01G095700 chr5D 77.581 1240 180 45 6448 7629 115022220 115021021 0.000000e+00 660.0
11 TraesCS5B01G095700 chr5D 81.040 865 119 26 4975 5810 115023497 115022649 0.000000e+00 647.0
12 TraesCS5B01G095700 chr5D 93.464 306 10 5 1541 1844 114902338 114902041 6.450000e-121 446.0
13 TraesCS5B01G095700 chr5D 92.739 303 11 4 790 1088 114903379 114903084 2.340000e-115 427.0
14 TraesCS5B01G095700 chr5D 86.649 382 49 2 5 385 88515389 88515009 1.090000e-113 422.0
15 TraesCS5B01G095700 chr5D 86.872 358 22 6 413 747 114904821 114904466 2.390000e-100 377.0
16 TraesCS5B01G095700 chr5D 92.453 265 4 6 1073 1321 114903064 114902800 1.860000e-96 364.0
17 TraesCS5B01G095700 chr5D 97.073 205 5 1 1341 1545 114902625 114902422 2.420000e-90 344.0
18 TraesCS5B01G095700 chr5D 82.730 359 50 6 5980 6338 114898252 114897906 8.830000e-80 309.0
19 TraesCS5B01G095700 chr5D 88.462 156 11 3 4059 4212 42065269 42065419 2.010000e-41 182.0
20 TraesCS5B01G095700 chr5D 87.500 160 17 2 4054 4211 91653961 91654119 2.010000e-41 182.0
21 TraesCS5B01G095700 chr5D 86.747 166 15 4 4051 4211 240087543 240087706 2.600000e-40 178.0
22 TraesCS5B01G095700 chr5D 100.000 46 0 0 382 427 114911885 114911840 1.620000e-12 86.1
23 TraesCS5B01G095700 chr5A 97.052 2035 50 6 4649 6681 120759368 120757342 0.000000e+00 3417.0
24 TraesCS5B01G095700 chr5A 97.209 1935 49 5 7128 9059 120753903 120751971 0.000000e+00 3269.0
25 TraesCS5B01G095700 chr5A 94.073 928 35 6 3536 4450 120781421 120780501 0.000000e+00 1391.0
26 TraesCS5B01G095700 chr5A 90.065 775 33 17 1952 2710 120782203 120781457 0.000000e+00 965.0
27 TraesCS5B01G095700 chr5A 96.112 463 17 1 6678 7140 120754762 120754301 0.000000e+00 754.0
28 TraesCS5B01G095700 chr5A 77.583 1200 160 46 6453 7594 121114490 121113342 7.720000e-175 625.0
29 TraesCS5B01G095700 chr5A 82.660 767 58 37 382 1088 120783953 120783202 2.160000e-170 610.0
30 TraesCS5B01G095700 chr5A 77.653 1065 174 36 4952 5965 121115808 121114757 2.820000e-164 590.0
31 TraesCS5B01G095700 chr5A 90.136 294 10 6 1073 1350 120783182 120782892 1.860000e-96 364.0
32 TraesCS5B01G095700 chr5A 97.143 210 5 1 4446 4655 120764831 120764623 4.020000e-93 353.0
33 TraesCS5B01G095700 chr5A 93.805 226 12 2 1321 1545 120782892 120782668 1.130000e-88 339.0
34 TraesCS5B01G095700 chr5A 86.667 210 18 5 1599 1807 120782543 120782343 3.290000e-54 224.0
35 TraesCS5B01G095700 chr5A 90.526 95 9 0 6244 6338 120754762 120754668 9.550000e-25 126.0
36 TraesCS5B01G095700 chr1B 98.197 832 6 4 2716 3539 583851152 583851982 0.000000e+00 1445.0
37 TraesCS5B01G095700 chr1B 87.381 840 58 20 2717 3540 645097181 645097988 0.000000e+00 920.0
38 TraesCS5B01G095700 chr7B 88.717 842 51 20 2716 3540 594051712 594050898 0.000000e+00 989.0
39 TraesCS5B01G095700 chr7B 87.139 381 49 0 5 385 4356615 4356995 5.020000e-117 433.0
40 TraesCS5B01G095700 chr6A 88.319 839 62 14 2716 3540 55030862 55030046 0.000000e+00 974.0
41 TraesCS5B01G095700 chr3B 88.480 842 48 22 2717 3540 139473072 139472262 0.000000e+00 972.0
42 TraesCS5B01G095700 chr3B 95.890 365 14 1 3176 3540 67063416 67063053 2.820000e-164 590.0
43 TraesCS5B01G095700 chrUn 97.143 385 11 0 1 385 304652650 304653034 0.000000e+00 651.0
44 TraesCS5B01G095700 chr4B 80.952 861 91 42 2717 3540 440331591 440330767 1.670000e-171 614.0
45 TraesCS5B01G095700 chr7A 89.231 455 34 9 3085 3538 665759638 665759198 1.030000e-153 555.0
46 TraesCS5B01G095700 chr7A 85.227 176 17 4 4051 4220 277729860 277730032 1.210000e-38 172.0
47 TraesCS5B01G095700 chr7D 88.743 382 41 2 5 385 151028075 151028455 4.950000e-127 466.0
48 TraesCS5B01G095700 chr7D 100.000 29 0 0 1871 1899 214120621 214120649 5.000000e-03 54.7
49 TraesCS5B01G095700 chr2A 86.753 385 51 0 1 385 180442360 180442744 6.500000e-116 429.0
50 TraesCS5B01G095700 chr3A 88.599 307 30 3 3239 3545 731213272 731212971 1.440000e-97 368.0
51 TraesCS5B01G095700 chr2D 89.809 157 13 2 4060 4214 533659846 533660001 2.000000e-46 198.0
52 TraesCS5B01G095700 chr4A 87.975 158 15 3 4057 4211 677936820 677936664 5.590000e-42 183.0
53 TraesCS5B01G095700 chr1D 87.342 158 14 4 4060 4211 459929533 459929376 9.350000e-40 176.0
54 TraesCS5B01G095700 chr6B 100.000 30 0 0 1871 1900 604221899 604221870 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G095700 chr5B 126245833 126254891 9058 True 16729.000000 16729 100.000000 1 9059 1 chr5B.!!$R3 9058
1 TraesCS5B01G095700 chr5B 388803528 388804350 822 True 1304.000000 1304 95.296000 2717 3539 1 chr5B.!!$R4 822
2 TraesCS5B01G095700 chr5B 13614229 13615035 806 True 1000.000000 1000 89.115000 2716 3536 1 chr5B.!!$R1 820
3 TraesCS5B01G095700 chr5B 13646964 13647770 806 True 983.000000 983 88.743000 2716 3536 1 chr5B.!!$R2 820
4 TraesCS5B01G095700 chr5B 546903797 546904607 810 False 979.000000 979 88.626000 2716 3540 1 chr5B.!!$F2 824
5 TraesCS5B01G095700 chr5B 126294341 126296838 2497 True 612.500000 656 78.628500 4952 7629 2 chr5B.!!$R5 2677
6 TraesCS5B01G095700 chr5D 114895615 114904821 9206 True 1633.000000 9502 92.140875 413 9059 8 chr5D.!!$R3 8646
7 TraesCS5B01G095700 chr5D 115021021 115023497 2476 True 653.500000 660 79.310500 4975 7629 2 chr5D.!!$R4 2654
8 TraesCS5B01G095700 chr5A 120751971 120759368 7397 True 1891.500000 3417 95.224750 4649 9059 4 chr5A.!!$R2 4410
9 TraesCS5B01G095700 chr5A 120780501 120783953 3452 True 648.833333 1391 89.567667 382 4450 6 chr5A.!!$R3 4068
10 TraesCS5B01G095700 chr5A 121113342 121115808 2466 True 607.500000 625 77.618000 4952 7594 2 chr5A.!!$R4 2642
11 TraesCS5B01G095700 chr1B 583851152 583851982 830 False 1445.000000 1445 98.197000 2716 3539 1 chr1B.!!$F1 823
12 TraesCS5B01G095700 chr1B 645097181 645097988 807 False 920.000000 920 87.381000 2717 3540 1 chr1B.!!$F2 823
13 TraesCS5B01G095700 chr7B 594050898 594051712 814 True 989.000000 989 88.717000 2716 3540 1 chr7B.!!$R1 824
14 TraesCS5B01G095700 chr6A 55030046 55030862 816 True 974.000000 974 88.319000 2716 3540 1 chr6A.!!$R1 824
15 TraesCS5B01G095700 chr3B 139472262 139473072 810 True 972.000000 972 88.480000 2717 3540 1 chr3B.!!$R2 823
16 TraesCS5B01G095700 chr4B 440330767 440331591 824 True 614.000000 614 80.952000 2717 3540 1 chr4B.!!$R1 823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.032130 TCTTATCAGTCGCCGCATCC 59.968 55.000 0.00 0.00 0.00 3.51 F
282 283 0.035317 TCAAGCAGTAGTGGGCAGTG 59.965 55.000 0.00 0.00 0.00 3.66 F
313 314 0.036671 ACGTACCCAAGGCAGTAAGC 60.037 55.000 0.00 0.00 44.65 3.09 F
2167 3631 0.108709 AATTGTGCGCGCATTGGATT 60.109 45.000 38.62 27.49 0.00 3.01 F
3255 4834 1.534729 TGCTAGTCTCTCGTGAAGCA 58.465 50.000 7.33 7.33 37.62 3.91 F
3990 5622 1.444250 GGTCGTGACAACTCACCCA 59.556 57.895 2.00 0.00 43.64 4.51 F
5562 7208 0.527817 CGGTGCTGGATCGTAGGAAC 60.528 60.000 0.00 0.00 0.00 3.62 F
6187 8120 0.687427 TCTCGGGCATGGATCTGTCA 60.687 55.000 0.00 0.00 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1373 2684 1.822990 ACCGTGATCTTTTCGCTCCTA 59.177 47.619 0.00 0.00 32.41 2.94 R
2149 3613 0.108709 AAATCCAATGCGCGCACAAT 60.109 45.000 39.05 23.04 0.00 2.71 R
2294 3767 3.953612 GGGGATTGCATGACAGTTTCATA 59.046 43.478 0.00 0.00 43.68 2.15 R
3434 5064 0.106708 GGAGCAGTGGGATTCGCATA 59.893 55.000 6.70 0.00 0.00 3.14 R
5118 6761 1.425428 CAGGAAACGCAGGCGAATC 59.575 57.895 21.62 16.16 42.83 2.52 R
5761 7443 0.179111 CCGCGTCCTTATTCAGAGCA 60.179 55.000 4.92 0.00 0.00 4.26 R
6681 8614 1.307097 GCTCATTGGAGTGAGATGGC 58.693 55.000 8.01 0.00 46.77 4.40 R
8157 13118 0.608130 ATACTGGCAGCGACTGAACA 59.392 50.000 15.89 7.47 32.44 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.300233 CCCTCTTATCAGTCGCCGC 60.300 63.158 0.00 0.00 0.00 6.53
19 20 1.437573 CCTCTTATCAGTCGCCGCA 59.562 57.895 0.00 0.00 0.00 5.69
20 21 0.032678 CCTCTTATCAGTCGCCGCAT 59.967 55.000 0.00 0.00 0.00 4.73
21 22 1.413382 CTCTTATCAGTCGCCGCATC 58.587 55.000 0.00 0.00 0.00 3.91
22 23 0.032130 TCTTATCAGTCGCCGCATCC 59.968 55.000 0.00 0.00 0.00 3.51
23 24 0.249447 CTTATCAGTCGCCGCATCCA 60.249 55.000 0.00 0.00 0.00 3.41
24 25 0.249447 TTATCAGTCGCCGCATCCAG 60.249 55.000 0.00 0.00 0.00 3.86
25 26 2.087462 TATCAGTCGCCGCATCCAGG 62.087 60.000 0.00 0.00 0.00 4.45
34 35 3.028969 GCATCCAGGCGAGCAATC 58.971 61.111 0.00 0.00 0.00 2.67
35 36 1.820906 GCATCCAGGCGAGCAATCA 60.821 57.895 0.00 0.00 0.00 2.57
36 37 1.783031 GCATCCAGGCGAGCAATCAG 61.783 60.000 0.00 0.00 0.00 2.90
37 38 1.525535 ATCCAGGCGAGCAATCAGC 60.526 57.895 0.00 0.00 46.19 4.26
46 47 3.126528 GCAATCAGCTCCATGGCC 58.873 61.111 6.96 0.00 41.15 5.36
47 48 1.755395 GCAATCAGCTCCATGGCCA 60.755 57.895 8.56 8.56 41.15 5.36
48 49 1.113517 GCAATCAGCTCCATGGCCAT 61.114 55.000 14.09 14.09 41.15 4.40
49 50 0.959553 CAATCAGCTCCATGGCCATC 59.040 55.000 17.61 4.36 0.00 3.51
50 51 0.178970 AATCAGCTCCATGGCCATCC 60.179 55.000 17.61 4.63 0.00 3.51
51 52 2.077842 ATCAGCTCCATGGCCATCCC 62.078 60.000 17.61 4.24 0.00 3.85
60 61 3.909587 TGGCCATCCCAATCTGAAG 57.090 52.632 0.00 0.00 41.82 3.02
61 62 0.396139 TGGCCATCCCAATCTGAAGC 60.396 55.000 0.00 0.00 41.82 3.86
62 63 0.106318 GGCCATCCCAATCTGAAGCT 60.106 55.000 0.00 0.00 0.00 3.74
63 64 1.687368 GGCCATCCCAATCTGAAGCTT 60.687 52.381 0.00 0.00 0.00 3.74
64 65 1.407979 GCCATCCCAATCTGAAGCTTG 59.592 52.381 2.10 0.00 0.00 4.01
65 66 2.947243 GCCATCCCAATCTGAAGCTTGA 60.947 50.000 2.10 0.00 0.00 3.02
66 67 3.563223 CCATCCCAATCTGAAGCTTGAT 58.437 45.455 2.10 0.00 0.00 2.57
67 68 3.318275 CCATCCCAATCTGAAGCTTGATG 59.682 47.826 2.10 7.90 0.00 3.07
68 69 3.726557 TCCCAATCTGAAGCTTGATGT 57.273 42.857 2.10 0.00 0.00 3.06
69 70 4.038271 TCCCAATCTGAAGCTTGATGTT 57.962 40.909 2.10 0.00 0.00 2.71
70 71 4.012374 TCCCAATCTGAAGCTTGATGTTC 58.988 43.478 2.10 0.00 0.00 3.18
71 72 3.129988 CCCAATCTGAAGCTTGATGTTCC 59.870 47.826 2.10 0.00 0.00 3.62
72 73 3.760151 CCAATCTGAAGCTTGATGTTCCA 59.240 43.478 2.10 0.00 0.00 3.53
73 74 4.219070 CCAATCTGAAGCTTGATGTTCCAA 59.781 41.667 2.10 0.00 0.00 3.53
74 75 5.279106 CCAATCTGAAGCTTGATGTTCCAAA 60.279 40.000 2.10 0.00 0.00 3.28
75 76 6.395629 CAATCTGAAGCTTGATGTTCCAAAT 58.604 36.000 2.10 0.00 0.00 2.32
76 77 5.633830 TCTGAAGCTTGATGTTCCAAATC 57.366 39.130 2.10 0.00 0.00 2.17
77 78 4.460382 TCTGAAGCTTGATGTTCCAAATCC 59.540 41.667 2.10 0.00 0.00 3.01
78 79 4.151121 TGAAGCTTGATGTTCCAAATCCA 58.849 39.130 2.10 0.00 0.00 3.41
79 80 4.022068 TGAAGCTTGATGTTCCAAATCCAC 60.022 41.667 2.10 0.00 0.00 4.02
80 81 2.827921 AGCTTGATGTTCCAAATCCACC 59.172 45.455 0.00 0.00 0.00 4.61
81 82 2.827921 GCTTGATGTTCCAAATCCACCT 59.172 45.455 0.00 0.00 0.00 4.00
82 83 3.367703 GCTTGATGTTCCAAATCCACCTG 60.368 47.826 0.00 0.00 0.00 4.00
83 84 3.524095 TGATGTTCCAAATCCACCTGT 57.476 42.857 0.00 0.00 0.00 4.00
84 85 3.420893 TGATGTTCCAAATCCACCTGTC 58.579 45.455 0.00 0.00 0.00 3.51
85 86 3.181435 TGATGTTCCAAATCCACCTGTCA 60.181 43.478 0.00 0.00 0.00 3.58
86 87 2.582052 TGTTCCAAATCCACCTGTCAC 58.418 47.619 0.00 0.00 0.00 3.67
87 88 2.174639 TGTTCCAAATCCACCTGTCACT 59.825 45.455 0.00 0.00 0.00 3.41
88 89 2.814336 GTTCCAAATCCACCTGTCACTC 59.186 50.000 0.00 0.00 0.00 3.51
89 90 1.351017 TCCAAATCCACCTGTCACTCC 59.649 52.381 0.00 0.00 0.00 3.85
90 91 1.073763 CCAAATCCACCTGTCACTCCA 59.926 52.381 0.00 0.00 0.00 3.86
91 92 2.488891 CCAAATCCACCTGTCACTCCAA 60.489 50.000 0.00 0.00 0.00 3.53
92 93 2.554032 CAAATCCACCTGTCACTCCAAC 59.446 50.000 0.00 0.00 0.00 3.77
93 94 1.734655 ATCCACCTGTCACTCCAACT 58.265 50.000 0.00 0.00 0.00 3.16
94 95 1.048601 TCCACCTGTCACTCCAACTC 58.951 55.000 0.00 0.00 0.00 3.01
95 96 1.051812 CCACCTGTCACTCCAACTCT 58.948 55.000 0.00 0.00 0.00 3.24
96 97 1.270518 CCACCTGTCACTCCAACTCTG 60.271 57.143 0.00 0.00 0.00 3.35
97 98 1.051812 ACCTGTCACTCCAACTCTGG 58.948 55.000 0.00 0.00 45.08 3.86
106 107 3.256281 CCAACTCTGGAGGGCTTTC 57.744 57.895 2.58 0.00 46.92 2.62
107 108 0.674895 CCAACTCTGGAGGGCTTTCG 60.675 60.000 2.58 0.00 46.92 3.46
108 109 1.003233 AACTCTGGAGGGCTTTCGC 60.003 57.895 2.58 0.00 0.00 4.70
119 120 4.735132 CTTTCGCCGTCGCCCTCA 62.735 66.667 0.00 0.00 35.26 3.86
120 121 4.302509 TTTCGCCGTCGCCCTCAA 62.303 61.111 0.00 0.00 35.26 3.02
124 125 3.423154 GCCGTCGCCCTCAACTTG 61.423 66.667 0.00 0.00 0.00 3.16
125 126 3.423154 CCGTCGCCCTCAACTTGC 61.423 66.667 0.00 0.00 0.00 4.01
126 127 2.357517 CGTCGCCCTCAACTTGCT 60.358 61.111 0.00 0.00 0.00 3.91
127 128 2.671177 CGTCGCCCTCAACTTGCTG 61.671 63.158 0.00 0.00 0.00 4.41
128 129 1.598130 GTCGCCCTCAACTTGCTGT 60.598 57.895 0.00 0.00 0.00 4.40
129 130 1.301716 TCGCCCTCAACTTGCTGTC 60.302 57.895 0.00 0.00 0.00 3.51
130 131 2.328099 CGCCCTCAACTTGCTGTCC 61.328 63.158 0.00 0.00 0.00 4.02
131 132 1.228245 GCCCTCAACTTGCTGTCCA 60.228 57.895 0.00 0.00 0.00 4.02
132 133 0.823356 GCCCTCAACTTGCTGTCCAA 60.823 55.000 0.00 0.00 0.00 3.53
133 134 0.954452 CCCTCAACTTGCTGTCCAAC 59.046 55.000 0.00 0.00 0.00 3.77
134 135 1.679139 CCTCAACTTGCTGTCCAACA 58.321 50.000 0.00 0.00 0.00 3.33
135 136 1.334869 CCTCAACTTGCTGTCCAACAC 59.665 52.381 0.00 0.00 0.00 3.32
136 137 2.292267 CTCAACTTGCTGTCCAACACT 58.708 47.619 0.00 0.00 0.00 3.55
137 138 3.466836 CTCAACTTGCTGTCCAACACTA 58.533 45.455 0.00 0.00 0.00 2.74
138 139 3.466836 TCAACTTGCTGTCCAACACTAG 58.533 45.455 0.00 0.00 0.00 2.57
139 140 2.549754 CAACTTGCTGTCCAACACTAGG 59.450 50.000 0.00 0.00 0.00 3.02
140 141 2.047061 ACTTGCTGTCCAACACTAGGA 58.953 47.619 0.00 0.00 0.00 2.94
141 142 2.438021 ACTTGCTGTCCAACACTAGGAA 59.562 45.455 0.00 0.00 36.80 3.36
142 143 2.543777 TGCTGTCCAACACTAGGAAC 57.456 50.000 0.00 0.00 36.80 3.62
143 144 1.270094 TGCTGTCCAACACTAGGAACG 60.270 52.381 0.00 0.00 36.80 3.95
144 145 1.939838 GCTGTCCAACACTAGGAACGG 60.940 57.143 0.00 0.00 36.80 4.44
145 146 0.682852 TGTCCAACACTAGGAACGGG 59.317 55.000 0.00 0.00 36.80 5.28
146 147 0.683412 GTCCAACACTAGGAACGGGT 59.317 55.000 0.00 0.00 36.80 5.28
147 148 1.071228 GTCCAACACTAGGAACGGGTT 59.929 52.381 0.00 0.00 36.80 4.11
148 149 1.071071 TCCAACACTAGGAACGGGTTG 59.929 52.381 0.00 0.00 38.76 3.77
149 150 0.872388 CAACACTAGGAACGGGTTGC 59.128 55.000 0.00 0.00 33.36 4.17
150 151 0.250597 AACACTAGGAACGGGTTGCC 60.251 55.000 0.00 0.00 0.00 4.52
151 152 1.373435 CACTAGGAACGGGTTGCCA 59.627 57.895 0.00 0.00 0.00 4.92
152 153 0.673644 CACTAGGAACGGGTTGCCAG 60.674 60.000 0.00 0.00 0.00 4.85
153 154 1.745489 CTAGGAACGGGTTGCCAGC 60.745 63.158 0.00 0.00 0.00 4.85
154 155 3.262448 TAGGAACGGGTTGCCAGCC 62.262 63.158 0.00 0.00 37.19 4.85
162 163 3.064324 GTTGCCAGCCGCCAGAAT 61.064 61.111 0.00 0.00 36.24 2.40
163 164 2.751436 TTGCCAGCCGCCAGAATC 60.751 61.111 0.00 0.00 36.24 2.52
165 166 4.838152 GCCAGCCGCCAGAATCGA 62.838 66.667 0.00 0.00 0.00 3.59
166 167 2.109799 CCAGCCGCCAGAATCGAT 59.890 61.111 0.00 0.00 0.00 3.59
167 168 1.524621 CCAGCCGCCAGAATCGATT 60.525 57.895 11.20 11.20 0.00 3.34
168 169 1.645455 CAGCCGCCAGAATCGATTG 59.355 57.895 16.96 2.29 0.00 2.67
169 170 2.182842 AGCCGCCAGAATCGATTGC 61.183 57.895 16.96 11.98 0.00 3.56
170 171 3.025619 CCGCCAGAATCGATTGCC 58.974 61.111 16.96 1.60 0.00 4.52
171 172 1.819208 CCGCCAGAATCGATTGCCA 60.819 57.895 16.96 0.00 0.00 4.92
172 173 1.168407 CCGCCAGAATCGATTGCCAT 61.168 55.000 16.96 0.00 0.00 4.40
173 174 0.040692 CGCCAGAATCGATTGCCATG 60.041 55.000 16.96 8.60 0.00 3.66
174 175 0.318445 GCCAGAATCGATTGCCATGC 60.318 55.000 16.96 7.13 0.00 4.06
175 176 0.313043 CCAGAATCGATTGCCATGCC 59.687 55.000 16.96 0.00 0.00 4.40
176 177 1.315690 CAGAATCGATTGCCATGCCT 58.684 50.000 16.96 1.08 0.00 4.75
177 178 1.001706 CAGAATCGATTGCCATGCCTG 60.002 52.381 16.96 10.60 0.00 4.85
178 179 0.313043 GAATCGATTGCCATGCCTGG 59.687 55.000 16.96 3.22 46.17 4.45
179 180 0.106569 AATCGATTGCCATGCCTGGA 60.107 50.000 12.80 0.00 46.37 3.86
180 181 0.536687 ATCGATTGCCATGCCTGGAG 60.537 55.000 12.80 0.00 46.37 3.86
181 182 1.153107 CGATTGCCATGCCTGGAGA 60.153 57.895 12.80 0.00 46.37 3.71
182 183 0.749091 CGATTGCCATGCCTGGAGAA 60.749 55.000 12.80 3.89 46.37 2.87
183 184 0.743097 GATTGCCATGCCTGGAGAAC 59.257 55.000 12.80 0.00 46.37 3.01
184 185 0.333993 ATTGCCATGCCTGGAGAACT 59.666 50.000 12.80 0.00 46.37 3.01
185 186 0.991146 TTGCCATGCCTGGAGAACTA 59.009 50.000 12.80 0.00 46.37 2.24
186 187 0.253044 TGCCATGCCTGGAGAACTAC 59.747 55.000 12.80 0.00 46.37 2.73
187 188 0.253044 GCCATGCCTGGAGAACTACA 59.747 55.000 12.80 0.00 46.37 2.74
188 189 1.133976 GCCATGCCTGGAGAACTACAT 60.134 52.381 12.80 0.00 46.37 2.29
189 190 2.843701 CCATGCCTGGAGAACTACATC 58.156 52.381 0.97 0.00 46.37 3.06
190 191 2.171237 CCATGCCTGGAGAACTACATCA 59.829 50.000 0.97 0.00 46.37 3.07
191 192 3.181447 CCATGCCTGGAGAACTACATCAT 60.181 47.826 0.97 0.00 46.37 2.45
192 193 3.548745 TGCCTGGAGAACTACATCATG 57.451 47.619 0.00 0.00 0.00 3.07
193 194 2.171237 TGCCTGGAGAACTACATCATGG 59.829 50.000 0.00 0.00 0.00 3.66
194 195 2.435805 GCCTGGAGAACTACATCATGGA 59.564 50.000 0.00 0.00 0.00 3.41
195 196 3.118261 GCCTGGAGAACTACATCATGGAA 60.118 47.826 0.00 0.00 0.00 3.53
196 197 4.446371 CCTGGAGAACTACATCATGGAAC 58.554 47.826 0.00 0.00 0.00 3.62
197 198 4.446371 CTGGAGAACTACATCATGGAACC 58.554 47.826 0.00 0.00 0.00 3.62
198 199 3.199946 TGGAGAACTACATCATGGAACCC 59.800 47.826 0.00 0.00 0.00 4.11
199 200 3.458189 GAGAACTACATCATGGAACCCG 58.542 50.000 0.00 0.00 0.00 5.28
200 201 2.838202 AGAACTACATCATGGAACCCGT 59.162 45.455 0.00 0.00 0.00 5.28
201 202 2.981859 ACTACATCATGGAACCCGTC 57.018 50.000 0.00 0.00 0.00 4.79
210 211 2.369654 GGAACCCGTCCACCTTAGT 58.630 57.895 0.00 0.00 46.97 2.24
211 212 0.248565 GGAACCCGTCCACCTTAGTC 59.751 60.000 0.00 0.00 46.97 2.59
212 213 0.248565 GAACCCGTCCACCTTAGTCC 59.751 60.000 0.00 0.00 0.00 3.85
213 214 0.472352 AACCCGTCCACCTTAGTCCA 60.472 55.000 0.00 0.00 0.00 4.02
214 215 0.472352 ACCCGTCCACCTTAGTCCAA 60.472 55.000 0.00 0.00 0.00 3.53
215 216 0.688487 CCCGTCCACCTTAGTCCAAA 59.312 55.000 0.00 0.00 0.00 3.28
216 217 1.072648 CCCGTCCACCTTAGTCCAAAA 59.927 52.381 0.00 0.00 0.00 2.44
217 218 2.423577 CCGTCCACCTTAGTCCAAAAG 58.576 52.381 0.00 0.00 0.00 2.27
218 219 2.224450 CCGTCCACCTTAGTCCAAAAGT 60.224 50.000 0.00 0.00 0.00 2.66
219 220 3.473625 CGTCCACCTTAGTCCAAAAGTT 58.526 45.455 0.00 0.00 0.00 2.66
220 221 3.497262 CGTCCACCTTAGTCCAAAAGTTC 59.503 47.826 0.00 0.00 0.00 3.01
221 222 4.715713 GTCCACCTTAGTCCAAAAGTTCT 58.284 43.478 0.00 0.00 0.00 3.01
222 223 4.755629 GTCCACCTTAGTCCAAAAGTTCTC 59.244 45.833 0.00 0.00 0.00 2.87
223 224 4.410883 TCCACCTTAGTCCAAAAGTTCTCA 59.589 41.667 0.00 0.00 0.00 3.27
224 225 5.104277 TCCACCTTAGTCCAAAAGTTCTCAA 60.104 40.000 0.00 0.00 0.00 3.02
225 226 5.592688 CCACCTTAGTCCAAAAGTTCTCAAA 59.407 40.000 0.00 0.00 0.00 2.69
226 227 6.238759 CCACCTTAGTCCAAAAGTTCTCAAAG 60.239 42.308 0.00 0.00 0.00 2.77
227 228 5.299531 ACCTTAGTCCAAAAGTTCTCAAAGC 59.700 40.000 0.00 0.00 0.00 3.51
228 229 3.971032 AGTCCAAAAGTTCTCAAAGCG 57.029 42.857 0.00 0.00 0.00 4.68
229 230 3.541632 AGTCCAAAAGTTCTCAAAGCGA 58.458 40.909 0.00 0.00 0.00 4.93
230 231 3.945285 AGTCCAAAAGTTCTCAAAGCGAA 59.055 39.130 0.00 0.00 0.00 4.70
231 232 4.398044 AGTCCAAAAGTTCTCAAAGCGAAA 59.602 37.500 0.00 0.00 0.00 3.46
232 233 5.067805 AGTCCAAAAGTTCTCAAAGCGAAAT 59.932 36.000 0.00 0.00 0.00 2.17
233 234 5.399596 GTCCAAAAGTTCTCAAAGCGAAATC 59.600 40.000 0.00 0.00 0.00 2.17
234 235 5.299279 TCCAAAAGTTCTCAAAGCGAAATCT 59.701 36.000 0.00 0.00 0.00 2.40
235 236 5.400485 CCAAAAGTTCTCAAAGCGAAATCTG 59.600 40.000 0.00 0.00 0.00 2.90
236 237 3.820777 AGTTCTCAAAGCGAAATCTGC 57.179 42.857 0.00 0.00 0.00 4.26
237 238 2.158449 AGTTCTCAAAGCGAAATCTGCG 59.842 45.455 0.00 0.00 37.44 5.18
238 239 1.795768 TCTCAAAGCGAAATCTGCGT 58.204 45.000 0.00 0.00 37.44 5.24
239 240 1.726791 TCTCAAAGCGAAATCTGCGTC 59.273 47.619 0.00 0.00 37.44 5.19
240 241 0.796312 TCAAAGCGAAATCTGCGTCC 59.204 50.000 0.00 0.00 37.44 4.79
241 242 0.179189 CAAAGCGAAATCTGCGTCCC 60.179 55.000 0.00 0.00 37.44 4.46
242 243 0.605319 AAAGCGAAATCTGCGTCCCA 60.605 50.000 0.00 0.00 37.44 4.37
243 244 0.392998 AAGCGAAATCTGCGTCCCAT 60.393 50.000 0.00 0.00 37.44 4.00
244 245 0.464036 AGCGAAATCTGCGTCCCATA 59.536 50.000 0.00 0.00 37.44 2.74
245 246 1.070758 AGCGAAATCTGCGTCCCATAT 59.929 47.619 0.00 0.00 37.44 1.78
246 247 1.195448 GCGAAATCTGCGTCCCATATG 59.805 52.381 0.00 0.00 0.00 1.78
247 248 1.800586 CGAAATCTGCGTCCCATATGG 59.199 52.381 15.41 15.41 0.00 2.74
248 249 2.547855 CGAAATCTGCGTCCCATATGGA 60.548 50.000 24.00 6.56 42.41 3.41
256 257 2.923619 TCCCATATGGAACTCCGCA 58.076 52.632 24.00 0.00 41.40 5.69
257 258 0.468226 TCCCATATGGAACTCCGCAC 59.532 55.000 24.00 0.00 41.40 5.34
258 259 0.535102 CCCATATGGAACTCCGCACC 60.535 60.000 24.00 0.00 39.43 5.01
259 260 0.535102 CCATATGGAACTCCGCACCC 60.535 60.000 17.49 0.00 39.43 4.61
260 261 0.180171 CATATGGAACTCCGCACCCA 59.820 55.000 0.00 0.00 39.43 4.51
261 262 0.916086 ATATGGAACTCCGCACCCAA 59.084 50.000 0.00 0.00 39.43 4.12
262 263 0.251916 TATGGAACTCCGCACCCAAG 59.748 55.000 0.00 0.00 39.43 3.61
263 264 1.779061 ATGGAACTCCGCACCCAAGT 61.779 55.000 0.00 0.00 39.43 3.16
264 265 1.671379 GGAACTCCGCACCCAAGTC 60.671 63.158 0.00 0.00 0.00 3.01
265 266 1.070786 GAACTCCGCACCCAAGTCA 59.929 57.895 0.00 0.00 0.00 3.41
266 267 0.534203 GAACTCCGCACCCAAGTCAA 60.534 55.000 0.00 0.00 0.00 3.18
267 268 0.535102 AACTCCGCACCCAAGTCAAG 60.535 55.000 0.00 0.00 0.00 3.02
268 269 2.281484 TCCGCACCCAAGTCAAGC 60.281 61.111 0.00 0.00 0.00 4.01
269 270 2.594303 CCGCACCCAAGTCAAGCA 60.594 61.111 0.00 0.00 0.00 3.91
270 271 2.620112 CCGCACCCAAGTCAAGCAG 61.620 63.158 0.00 0.00 0.00 4.24
271 272 1.893808 CGCACCCAAGTCAAGCAGT 60.894 57.895 0.00 0.00 0.00 4.40
272 273 0.602638 CGCACCCAAGTCAAGCAGTA 60.603 55.000 0.00 0.00 0.00 2.74
273 274 1.160137 GCACCCAAGTCAAGCAGTAG 58.840 55.000 0.00 0.00 0.00 2.57
274 275 1.543429 GCACCCAAGTCAAGCAGTAGT 60.543 52.381 0.00 0.00 0.00 2.73
275 276 2.146342 CACCCAAGTCAAGCAGTAGTG 58.854 52.381 0.00 0.00 0.00 2.74
276 277 1.072331 ACCCAAGTCAAGCAGTAGTGG 59.928 52.381 0.00 0.00 0.00 4.00
277 278 1.611673 CCCAAGTCAAGCAGTAGTGGG 60.612 57.143 0.00 0.00 38.42 4.61
278 279 1.160137 CAAGTCAAGCAGTAGTGGGC 58.840 55.000 0.00 0.00 0.00 5.36
279 280 0.764890 AAGTCAAGCAGTAGTGGGCA 59.235 50.000 0.00 0.00 0.00 5.36
280 281 0.322975 AGTCAAGCAGTAGTGGGCAG 59.677 55.000 0.00 0.00 0.00 4.85
281 282 0.035458 GTCAAGCAGTAGTGGGCAGT 59.965 55.000 0.00 0.00 0.00 4.40
282 283 0.035317 TCAAGCAGTAGTGGGCAGTG 59.965 55.000 0.00 0.00 0.00 3.66
283 284 0.957395 CAAGCAGTAGTGGGCAGTGG 60.957 60.000 0.00 0.00 0.00 4.00
284 285 1.418908 AAGCAGTAGTGGGCAGTGGT 61.419 55.000 0.00 0.00 0.00 4.16
285 286 1.376037 GCAGTAGTGGGCAGTGGTC 60.376 63.158 0.00 0.00 0.00 4.02
286 287 1.296715 CAGTAGTGGGCAGTGGTCC 59.703 63.158 0.00 0.00 40.08 4.46
287 288 2.264794 GTAGTGGGCAGTGGTCCG 59.735 66.667 0.00 0.00 43.76 4.79
288 289 2.118732 TAGTGGGCAGTGGTCCGA 59.881 61.111 0.00 0.00 43.76 4.55
289 290 1.982395 TAGTGGGCAGTGGTCCGAG 60.982 63.158 0.00 0.00 43.76 4.63
290 291 2.435120 TAGTGGGCAGTGGTCCGAGA 62.435 60.000 0.00 0.00 43.76 4.04
291 292 2.284625 TGGGCAGTGGTCCGAGAT 60.285 61.111 0.00 0.00 43.76 2.75
292 293 2.187946 GGGCAGTGGTCCGAGATG 59.812 66.667 0.00 0.00 0.00 2.90
293 294 2.187946 GGCAGTGGTCCGAGATGG 59.812 66.667 0.00 0.00 40.09 3.51
301 302 4.247781 TCCGAGATGGACGTACCC 57.752 61.111 0.00 0.00 43.74 3.69
302 303 1.303948 TCCGAGATGGACGTACCCA 59.696 57.895 0.00 0.00 43.74 4.51
303 304 0.323633 TCCGAGATGGACGTACCCAA 60.324 55.000 0.00 0.00 43.74 4.12
304 305 0.102481 CCGAGATGGACGTACCCAAG 59.898 60.000 0.00 0.00 42.00 3.61
305 306 0.102481 CGAGATGGACGTACCCAAGG 59.898 60.000 0.00 0.00 40.04 3.61
306 307 0.179081 GAGATGGACGTACCCAAGGC 60.179 60.000 0.00 0.00 40.04 4.35
307 308 0.907704 AGATGGACGTACCCAAGGCA 60.908 55.000 0.00 0.00 40.04 4.75
308 309 0.462047 GATGGACGTACCCAAGGCAG 60.462 60.000 0.00 0.00 40.04 4.85
309 310 1.198759 ATGGACGTACCCAAGGCAGT 61.199 55.000 0.00 0.00 40.04 4.40
310 311 0.542467 TGGACGTACCCAAGGCAGTA 60.542 55.000 0.00 0.00 38.00 2.74
311 312 0.609662 GGACGTACCCAAGGCAGTAA 59.390 55.000 0.00 0.00 0.00 2.24
312 313 1.405121 GGACGTACCCAAGGCAGTAAG 60.405 57.143 0.00 0.00 0.00 2.34
313 314 0.036671 ACGTACCCAAGGCAGTAAGC 60.037 55.000 0.00 0.00 44.65 3.09
329 330 3.440415 GCAGGTTTGCCGGGTAGC 61.440 66.667 2.18 0.00 44.74 3.58
330 331 2.750237 CAGGTTTGCCGGGTAGCC 60.750 66.667 2.18 0.00 40.50 3.93
331 332 3.253838 AGGTTTGCCGGGTAGCCA 61.254 61.111 12.31 0.00 40.50 4.75
332 333 2.044352 GGTTTGCCGGGTAGCCAT 60.044 61.111 12.31 0.00 0.00 4.40
333 334 2.119029 GGTTTGCCGGGTAGCCATC 61.119 63.158 12.31 2.03 0.00 3.51
334 335 2.119029 GTTTGCCGGGTAGCCATCC 61.119 63.158 12.31 0.00 0.00 3.51
335 336 2.305607 TTTGCCGGGTAGCCATCCT 61.306 57.895 12.31 0.00 0.00 3.24
336 337 2.265467 TTTGCCGGGTAGCCATCCTC 62.265 60.000 12.31 0.00 0.00 3.71
337 338 3.942439 GCCGGGTAGCCATCCTCC 61.942 72.222 12.31 0.00 0.00 4.30
338 339 3.242291 CCGGGTAGCCATCCTCCC 61.242 72.222 12.31 0.00 36.82 4.30
339 340 2.445845 CGGGTAGCCATCCTCCCA 60.446 66.667 12.31 0.00 39.87 4.37
340 341 2.070039 CGGGTAGCCATCCTCCCAA 61.070 63.158 12.31 0.00 39.87 4.12
341 342 1.839894 GGGTAGCCATCCTCCCAAG 59.160 63.158 5.96 0.00 39.68 3.61
342 343 0.988678 GGGTAGCCATCCTCCCAAGT 60.989 60.000 5.96 0.00 39.68 3.16
343 344 0.181350 GGTAGCCATCCTCCCAAGTG 59.819 60.000 0.00 0.00 0.00 3.16
344 345 0.912486 GTAGCCATCCTCCCAAGTGT 59.088 55.000 0.00 0.00 0.00 3.55
345 346 1.282157 GTAGCCATCCTCCCAAGTGTT 59.718 52.381 0.00 0.00 0.00 3.32
346 347 0.329596 AGCCATCCTCCCAAGTGTTC 59.670 55.000 0.00 0.00 0.00 3.18
347 348 1.026718 GCCATCCTCCCAAGTGTTCG 61.027 60.000 0.00 0.00 0.00 3.95
348 349 0.324943 CCATCCTCCCAAGTGTTCGT 59.675 55.000 0.00 0.00 0.00 3.85
349 350 1.553248 CCATCCTCCCAAGTGTTCGTA 59.447 52.381 0.00 0.00 0.00 3.43
350 351 2.418746 CCATCCTCCCAAGTGTTCGTAG 60.419 54.545 0.00 0.00 0.00 3.51
351 352 0.606604 TCCTCCCAAGTGTTCGTAGC 59.393 55.000 0.00 0.00 0.00 3.58
352 353 0.320374 CCTCCCAAGTGTTCGTAGCA 59.680 55.000 0.00 0.00 0.00 3.49
353 354 1.270625 CCTCCCAAGTGTTCGTAGCAA 60.271 52.381 0.00 0.00 0.00 3.91
354 355 2.489971 CTCCCAAGTGTTCGTAGCAAA 58.510 47.619 0.00 0.00 0.00 3.68
355 356 2.480419 CTCCCAAGTGTTCGTAGCAAAG 59.520 50.000 0.00 0.00 0.00 2.77
356 357 2.103432 TCCCAAGTGTTCGTAGCAAAGA 59.897 45.455 0.00 0.00 0.00 2.52
357 358 3.074412 CCCAAGTGTTCGTAGCAAAGAT 58.926 45.455 0.00 0.00 0.00 2.40
358 359 3.120199 CCCAAGTGTTCGTAGCAAAGATG 60.120 47.826 0.00 0.00 0.00 2.90
359 360 3.498397 CCAAGTGTTCGTAGCAAAGATGT 59.502 43.478 0.00 0.00 0.00 3.06
360 361 4.457810 CAAGTGTTCGTAGCAAAGATGTG 58.542 43.478 0.00 0.00 0.00 3.21
361 362 3.990092 AGTGTTCGTAGCAAAGATGTGA 58.010 40.909 0.00 0.00 0.00 3.58
362 363 4.569943 AGTGTTCGTAGCAAAGATGTGAT 58.430 39.130 0.00 0.00 0.00 3.06
363 364 4.627467 AGTGTTCGTAGCAAAGATGTGATC 59.373 41.667 0.00 0.00 0.00 2.92
364 365 4.388773 GTGTTCGTAGCAAAGATGTGATCA 59.611 41.667 0.00 0.00 0.00 2.92
365 366 4.994217 TGTTCGTAGCAAAGATGTGATCAA 59.006 37.500 0.00 0.00 0.00 2.57
366 367 5.643348 TGTTCGTAGCAAAGATGTGATCAAT 59.357 36.000 0.00 0.00 0.00 2.57
367 368 5.973651 TCGTAGCAAAGATGTGATCAATC 57.026 39.130 0.00 3.46 0.00 2.67
368 369 5.664457 TCGTAGCAAAGATGTGATCAATCT 58.336 37.500 0.00 5.81 0.00 2.40
369 370 6.108687 TCGTAGCAAAGATGTGATCAATCTT 58.891 36.000 19.14 19.14 36.32 2.40
370 371 6.256539 TCGTAGCAAAGATGTGATCAATCTTC 59.743 38.462 22.37 15.55 33.93 2.87
371 372 6.257411 CGTAGCAAAGATGTGATCAATCTTCT 59.743 38.462 22.37 19.28 33.93 2.85
372 373 6.680874 AGCAAAGATGTGATCAATCTTCTC 57.319 37.500 22.37 18.33 33.93 2.87
373 374 5.589452 AGCAAAGATGTGATCAATCTTCTCC 59.411 40.000 22.37 16.50 33.93 3.71
374 375 5.356190 GCAAAGATGTGATCAATCTTCTCCA 59.644 40.000 22.37 7.07 33.93 3.86
375 376 6.127814 GCAAAGATGTGATCAATCTTCTCCAA 60.128 38.462 22.37 0.00 33.93 3.53
376 377 6.998968 AAGATGTGATCAATCTTCTCCAAC 57.001 37.500 19.14 3.65 29.44 3.77
377 378 5.114780 AGATGTGATCAATCTTCTCCAACG 58.885 41.667 0.00 0.00 0.00 4.10
378 379 4.271696 TGTGATCAATCTTCTCCAACGT 57.728 40.909 0.00 0.00 0.00 3.99
379 380 3.996363 TGTGATCAATCTTCTCCAACGTG 59.004 43.478 0.00 0.00 0.00 4.49
380 381 3.372206 GTGATCAATCTTCTCCAACGTGG 59.628 47.826 0.00 0.00 39.43 4.94
395 396 4.082949 CCAACGTGGGGTTAGATTTTTCTC 60.083 45.833 0.00 0.00 36.49 2.87
396 397 3.682696 ACGTGGGGTTAGATTTTTCTCC 58.317 45.455 0.00 0.00 0.00 3.71
411 412 4.386867 TTTCTCCATGACACCTATCGAC 57.613 45.455 0.00 0.00 0.00 4.20
434 436 9.595823 CGACCTGGATTTAAATCTTAGACTTAA 57.404 33.333 23.85 0.00 35.73 1.85
452 454 7.531716 AGACTTAATATAGATGCTCGCACTAC 58.468 38.462 0.00 0.00 0.00 2.73
529 553 6.589454 GCGTTAGCATTTGCAAAATACTTTT 58.411 32.000 17.19 0.00 45.16 2.27
590 634 3.877508 CGGCTCCTATCAGGGTTAAAAAG 59.122 47.826 0.00 0.00 35.59 2.27
604 648 7.337942 CAGGGTTAAAAAGATCTAGACTTGCAT 59.662 37.037 0.00 0.00 0.00 3.96
708 752 4.156455 AGGTGTCAGTGATGACTTTGTT 57.844 40.909 9.57 0.00 39.41 2.83
726 770 8.502161 ACTTTGTTAATTTTCAGATGTTACGC 57.498 30.769 0.00 0.00 0.00 4.42
740 784 2.428171 TGTTACGCCGGCTTAGTATCTT 59.572 45.455 26.68 0.00 0.00 2.40
747 791 3.069158 GCCGGCTTAGTATCTTTGAGGTA 59.931 47.826 22.15 0.00 0.00 3.08
748 792 4.796618 GCCGGCTTAGTATCTTTGAGGTAG 60.797 50.000 22.15 0.00 0.00 3.18
754 816 7.379750 GCTTAGTATCTTTGAGGTAGGGTATG 58.620 42.308 0.00 0.00 0.00 2.39
763 825 0.179056 GGTAGGGTATGCGTGCATGT 60.179 55.000 17.21 2.43 37.82 3.21
775 837 8.661257 GGTATGCGTGCATGTACATATTTATAA 58.339 33.333 17.21 0.00 37.82 0.98
852 1946 2.913777 TCCAAGAGTACGTGTCGATG 57.086 50.000 0.00 0.36 0.00 3.84
942 2036 2.179517 GACTCGACTGCCTCCGTG 59.820 66.667 0.00 0.00 0.00 4.94
1018 2116 1.414919 ACCCGCGCTAATCCATTCTTA 59.585 47.619 5.56 0.00 0.00 2.10
1031 2129 5.843019 TCCATTCTTACTCCTTTTCCACT 57.157 39.130 0.00 0.00 0.00 4.00
1035 2133 7.236847 TCCATTCTTACTCCTTTTCCACTAAGA 59.763 37.037 0.00 0.00 0.00 2.10
1036 2134 7.550906 CCATTCTTACTCCTTTTCCACTAAGAG 59.449 40.741 0.00 0.00 0.00 2.85
1037 2135 6.607004 TCTTACTCCTTTTCCACTAAGAGG 57.393 41.667 0.00 0.00 40.19 3.69
1038 2136 6.320518 TCTTACTCCTTTTCCACTAAGAGGA 58.679 40.000 0.00 0.00 44.22 3.71
1039 2137 6.785963 TCTTACTCCTTTTCCACTAAGAGGAA 59.214 38.462 0.00 0.00 45.34 3.36
1120 2253 1.204113 AAGAGGGAGCTGGTCTTGGG 61.204 60.000 6.83 0.00 0.00 4.12
1180 2313 3.791586 GGTCCCTGGAGCTGCCTC 61.792 72.222 1.53 0.00 39.31 4.70
1273 2415 4.337763 CTCTTTCTTGTGCGAATGTATGC 58.662 43.478 0.00 0.00 0.00 3.14
1322 2471 2.084610 TGATTCTCGTCTGCACCTTG 57.915 50.000 0.00 0.00 0.00 3.61
1373 2684 0.752054 CCCTGCCAATTTGTGTGTGT 59.248 50.000 0.00 0.00 0.00 3.72
1441 2752 2.415090 GCATGGTGAGCACAGATCAAAC 60.415 50.000 2.75 0.00 26.97 2.93
1553 2951 7.087007 TCAATATGCGTTAATTGTGCTTTTCA 58.913 30.769 2.19 0.00 35.16 2.69
1555 2953 9.018716 CAATATGCGTTAATTGTGCTTTTCATA 57.981 29.630 0.00 0.00 0.00 2.15
1904 3348 4.379499 CCTTGATTAGTTGCTCCCGAAAAC 60.379 45.833 0.00 0.00 0.00 2.43
1961 3405 2.443416 GTACCCCTTGGAACCATTGTC 58.557 52.381 0.00 0.00 34.81 3.18
1962 3406 0.114364 ACCCCTTGGAACCATTGTCC 59.886 55.000 0.00 0.00 34.81 4.02
2167 3631 0.108709 AATTGTGCGCGCATTGGATT 60.109 45.000 38.62 27.49 0.00 3.01
2458 3931 3.938963 GTCACAAAAGTTCAGACAGGTCA 59.061 43.478 1.84 0.00 0.00 4.02
2512 3985 6.326323 TGAGGCTTCAGTTACATACATGGATA 59.674 38.462 0.00 0.00 0.00 2.59
2513 3986 6.763355 AGGCTTCAGTTACATACATGGATAG 58.237 40.000 0.00 0.00 0.00 2.08
2514 3987 5.934625 GGCTTCAGTTACATACATGGATAGG 59.065 44.000 0.00 0.00 0.00 2.57
2515 3988 5.934625 GCTTCAGTTACATACATGGATAGGG 59.065 44.000 0.00 0.00 0.00 3.53
2516 3989 6.239600 GCTTCAGTTACATACATGGATAGGGA 60.240 42.308 0.00 0.00 0.00 4.20
2517 3990 6.665992 TCAGTTACATACATGGATAGGGAC 57.334 41.667 0.00 0.00 0.00 4.46
2518 3991 6.140377 TCAGTTACATACATGGATAGGGACA 58.860 40.000 0.00 0.00 0.00 4.02
2519 3992 6.787458 TCAGTTACATACATGGATAGGGACAT 59.213 38.462 0.00 0.00 0.00 3.06
3255 4834 1.534729 TGCTAGTCTCTCGTGAAGCA 58.465 50.000 7.33 7.33 37.62 3.91
3399 5028 2.236146 TGGGTCACACAGCGAATTCTAT 59.764 45.455 3.52 0.00 0.00 1.98
3683 5315 3.117738 CCACTTGATTTGGCTATCTCCCT 60.118 47.826 0.00 0.00 0.00 4.20
3897 5529 7.710475 TCAAAAACATCAGTTCCATTTTTCTCC 59.290 33.333 0.00 0.00 36.84 3.71
3990 5622 1.444250 GGTCGTGACAACTCACCCA 59.556 57.895 2.00 0.00 43.64 4.51
4392 6035 9.473007 TTTTGATGATCAAGGTTGTATATTGGA 57.527 29.630 8.01 0.00 37.70 3.53
4977 6620 5.068636 CCATCTGATGTTCCCTTAATGGAG 58.931 45.833 15.95 0.00 38.35 3.86
5118 6761 0.878523 TGAGTGAACCGAACGCCAAG 60.879 55.000 0.00 0.00 0.00 3.61
5562 7208 0.527817 CGGTGCTGGATCGTAGGAAC 60.528 60.000 0.00 0.00 0.00 3.62
5706 7386 5.163363 CTGGAAGAAATAGCCAACGATGGT 61.163 45.833 13.78 3.04 43.10 3.55
5761 7443 6.672266 TCTACAGTGGAAGACTTCTTGAAT 57.328 37.500 14.72 1.88 36.11 2.57
5779 7461 1.858091 ATGCTCTGAATAAGGACGCG 58.142 50.000 3.53 3.53 0.00 6.01
5803 7485 2.167075 CGACCTCCGTGTAAGGGTAAAT 59.833 50.000 0.00 0.00 43.84 1.40
6021 7945 4.253685 AGTTCCGTTTGACTATGTGATGG 58.746 43.478 0.00 0.00 0.00 3.51
6173 8106 1.227089 CGATGGCCTCAACTCTCGG 60.227 63.158 3.32 0.00 0.00 4.63
6179 8112 1.153289 CCTCAACTCTCGGGCATGG 60.153 63.158 0.00 0.00 0.00 3.66
6187 8120 0.687427 TCTCGGGCATGGATCTGTCA 60.687 55.000 0.00 0.00 0.00 3.58
6404 8337 6.040209 TGCTCATACTTGCCATTTTTCAAT 57.960 33.333 0.00 0.00 0.00 2.57
6567 8500 8.910944 GGTACTTCAAGGTTAGTCAGATATACA 58.089 37.037 0.00 0.00 0.00 2.29
6651 8584 1.781025 CGTTTCAAGGAACCGCAGCA 61.781 55.000 0.00 0.00 0.00 4.41
6681 8614 2.738846 CCGGTTTCATCAAGTCACTGAG 59.261 50.000 0.00 0.00 0.00 3.35
6761 11277 3.477530 ACCAAGGTAGTTGTTGCTTCTC 58.522 45.455 0.00 0.00 33.87 2.87
6831 11348 3.899734 TGCAATTTCGGTGACTTGAATG 58.100 40.909 0.00 0.00 0.00 2.67
7001 11523 6.183360 GCAAAACTGAACAGACCTGATAGATC 60.183 42.308 8.87 0.00 0.00 2.75
7038 11563 2.290514 TGCTTCCAGGATCAGTTCAAGG 60.291 50.000 0.00 0.00 0.00 3.61
7257 12192 3.823330 CGAACCGGAGCCTAGCGT 61.823 66.667 9.46 0.00 0.00 5.07
7354 12297 7.437862 GTGTAACATCATGGTTTTGTGTCATTT 59.562 33.333 0.00 0.00 36.32 2.32
7511 12468 1.150536 GGGTGTGCTCCAACTTGGA 59.849 57.895 10.23 10.23 45.98 3.53
8057 13018 3.508793 AGGTATCTCAGGAAAACGTTCGA 59.491 43.478 0.00 0.00 34.28 3.71
8090 13051 4.161565 AGTTTGAGAACACAGTACCTGACA 59.838 41.667 0.00 0.00 38.26 3.58
8157 13118 4.515191 AGACATTTGTAAGTGTTCGCATGT 59.485 37.500 0.00 0.00 0.00 3.21
8488 13451 0.554305 TGCTCGGTACCTCCATCCTA 59.446 55.000 10.90 0.00 35.57 2.94
8524 13487 3.192422 CACAACCAACAAACTGAAGTCCA 59.808 43.478 0.00 0.00 0.00 4.02
8813 13776 7.095439 GGTCAATGAGAAACACTAAGAGTTCAG 60.095 40.741 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.300233 GCGGCGACTGATAAGAGGG 60.300 63.158 12.98 0.00 0.00 4.30
1 2 0.032678 ATGCGGCGACTGATAAGAGG 59.967 55.000 12.98 0.00 0.00 3.69
2 3 1.413382 GATGCGGCGACTGATAAGAG 58.587 55.000 12.98 0.00 0.00 2.85
3 4 0.032130 GGATGCGGCGACTGATAAGA 59.968 55.000 12.98 0.00 0.00 2.10
4 5 0.249447 TGGATGCGGCGACTGATAAG 60.249 55.000 12.98 0.00 0.00 1.73
5 6 0.249447 CTGGATGCGGCGACTGATAA 60.249 55.000 12.98 0.00 0.00 1.75
6 7 1.363807 CTGGATGCGGCGACTGATA 59.636 57.895 12.98 0.00 0.00 2.15
7 8 2.107750 CTGGATGCGGCGACTGAT 59.892 61.111 12.98 0.00 0.00 2.90
8 9 4.147449 CCTGGATGCGGCGACTGA 62.147 66.667 12.98 0.00 0.00 3.41
17 18 1.783031 CTGATTGCTCGCCTGGATGC 61.783 60.000 0.00 0.00 0.00 3.91
18 19 1.783031 GCTGATTGCTCGCCTGGATG 61.783 60.000 0.00 0.00 38.95 3.51
19 20 1.525535 GCTGATTGCTCGCCTGGAT 60.526 57.895 0.00 0.00 38.95 3.41
20 21 2.124983 GCTGATTGCTCGCCTGGA 60.125 61.111 0.00 0.00 38.95 3.86
29 30 1.113517 ATGGCCATGGAGCTGATTGC 61.114 55.000 20.04 0.00 43.29 3.56
30 31 0.959553 GATGGCCATGGAGCTGATTG 59.040 55.000 26.56 0.00 0.00 2.67
31 32 0.178970 GGATGGCCATGGAGCTGATT 60.179 55.000 26.56 0.00 0.00 2.57
32 33 1.459369 GGATGGCCATGGAGCTGAT 59.541 57.895 26.56 0.00 0.00 2.90
33 34 2.760378 GGGATGGCCATGGAGCTGA 61.760 63.158 26.56 0.00 35.15 4.26
34 35 2.203451 GGGATGGCCATGGAGCTG 60.203 66.667 26.56 0.00 35.15 4.24
35 36 1.661990 ATTGGGATGGCCATGGAGCT 61.662 55.000 26.56 0.00 35.15 4.09
36 37 1.152398 ATTGGGATGGCCATGGAGC 60.152 57.895 26.56 8.49 35.15 4.70
37 38 0.481567 AGATTGGGATGGCCATGGAG 59.518 55.000 26.56 0.00 35.15 3.86
38 39 0.186630 CAGATTGGGATGGCCATGGA 59.813 55.000 26.56 6.15 35.15 3.41
39 40 0.186630 TCAGATTGGGATGGCCATGG 59.813 55.000 26.56 7.63 35.15 3.66
40 41 1.961394 CTTCAGATTGGGATGGCCATG 59.039 52.381 26.56 7.81 35.15 3.66
41 42 1.756690 GCTTCAGATTGGGATGGCCAT 60.757 52.381 20.96 20.96 35.15 4.40
42 43 0.396139 GCTTCAGATTGGGATGGCCA 60.396 55.000 8.56 8.56 35.15 5.36
43 44 0.106318 AGCTTCAGATTGGGATGGCC 60.106 55.000 0.00 0.00 0.00 5.36
44 45 1.407979 CAAGCTTCAGATTGGGATGGC 59.592 52.381 0.00 0.00 37.74 4.40
45 46 3.008835 TCAAGCTTCAGATTGGGATGG 57.991 47.619 0.00 0.00 41.37 3.51
46 47 3.952323 ACATCAAGCTTCAGATTGGGATG 59.048 43.478 14.30 14.30 41.37 3.51
47 48 4.246712 ACATCAAGCTTCAGATTGGGAT 57.753 40.909 0.00 0.00 41.37 3.85
48 49 3.726557 ACATCAAGCTTCAGATTGGGA 57.273 42.857 0.00 0.00 41.37 4.37
49 50 3.129988 GGAACATCAAGCTTCAGATTGGG 59.870 47.826 0.00 1.32 41.37 4.12
50 51 3.760151 TGGAACATCAAGCTTCAGATTGG 59.240 43.478 0.00 0.00 41.37 3.16
51 52 5.381174 TTGGAACATCAAGCTTCAGATTG 57.619 39.130 0.00 0.00 42.30 2.67
52 53 6.350780 GGATTTGGAACATCAAGCTTCAGATT 60.351 38.462 0.00 0.00 39.30 2.40
53 54 5.126707 GGATTTGGAACATCAAGCTTCAGAT 59.873 40.000 0.00 0.00 39.30 2.90
54 55 4.460382 GGATTTGGAACATCAAGCTTCAGA 59.540 41.667 0.00 0.00 39.30 3.27
55 56 4.219070 TGGATTTGGAACATCAAGCTTCAG 59.781 41.667 0.00 0.00 39.30 3.02
56 57 4.022068 GTGGATTTGGAACATCAAGCTTCA 60.022 41.667 0.00 0.00 39.30 3.02
57 58 4.488879 GTGGATTTGGAACATCAAGCTTC 58.511 43.478 0.00 0.00 39.30 3.86
58 59 3.259123 GGTGGATTTGGAACATCAAGCTT 59.741 43.478 0.00 0.00 39.30 3.74
59 60 2.827921 GGTGGATTTGGAACATCAAGCT 59.172 45.455 0.00 0.00 39.30 3.74
60 61 2.827921 AGGTGGATTTGGAACATCAAGC 59.172 45.455 0.00 0.00 39.30 4.01
61 62 3.828451 ACAGGTGGATTTGGAACATCAAG 59.172 43.478 0.00 0.00 39.30 3.02
62 63 3.826157 GACAGGTGGATTTGGAACATCAA 59.174 43.478 0.00 0.00 39.30 2.57
63 64 3.181435 TGACAGGTGGATTTGGAACATCA 60.181 43.478 0.00 0.00 39.30 3.07
64 65 3.191371 GTGACAGGTGGATTTGGAACATC 59.809 47.826 0.00 0.00 39.30 3.06
65 66 3.157087 GTGACAGGTGGATTTGGAACAT 58.843 45.455 0.00 0.00 39.30 2.71
66 67 2.174639 AGTGACAGGTGGATTTGGAACA 59.825 45.455 0.00 0.00 0.00 3.18
67 68 2.814336 GAGTGACAGGTGGATTTGGAAC 59.186 50.000 0.00 0.00 0.00 3.62
68 69 2.224769 GGAGTGACAGGTGGATTTGGAA 60.225 50.000 0.00 0.00 0.00 3.53
69 70 1.351017 GGAGTGACAGGTGGATTTGGA 59.649 52.381 0.00 0.00 0.00 3.53
70 71 1.073763 TGGAGTGACAGGTGGATTTGG 59.926 52.381 0.00 0.00 0.00 3.28
71 72 2.554032 GTTGGAGTGACAGGTGGATTTG 59.446 50.000 0.00 0.00 0.00 2.32
72 73 2.443255 AGTTGGAGTGACAGGTGGATTT 59.557 45.455 0.00 0.00 0.00 2.17
73 74 2.039084 GAGTTGGAGTGACAGGTGGATT 59.961 50.000 0.00 0.00 0.00 3.01
74 75 1.625818 GAGTTGGAGTGACAGGTGGAT 59.374 52.381 0.00 0.00 0.00 3.41
75 76 1.048601 GAGTTGGAGTGACAGGTGGA 58.951 55.000 0.00 0.00 0.00 4.02
76 77 1.051812 AGAGTTGGAGTGACAGGTGG 58.948 55.000 0.00 0.00 0.00 4.61
77 78 2.160822 CAGAGTTGGAGTGACAGGTG 57.839 55.000 0.00 0.00 0.00 4.00
88 89 0.674895 CGAAAGCCCTCCAGAGTTGG 60.675 60.000 0.00 0.00 46.49 3.77
89 90 2.846371 CGAAAGCCCTCCAGAGTTG 58.154 57.895 0.00 0.00 0.00 3.16
102 103 4.735132 TGAGGGCGACGGCGAAAG 62.735 66.667 18.90 5.16 41.24 2.62
103 104 4.302509 TTGAGGGCGACGGCGAAA 62.303 61.111 18.90 6.63 41.24 3.46
107 108 3.423154 CAAGTTGAGGGCGACGGC 61.423 66.667 13.84 13.84 38.90 5.68
108 109 3.423154 GCAAGTTGAGGGCGACGG 61.423 66.667 7.16 0.00 33.42 4.79
109 110 2.357517 AGCAAGTTGAGGGCGACG 60.358 61.111 7.16 0.00 33.42 5.12
110 111 1.569479 GACAGCAAGTTGAGGGCGAC 61.569 60.000 7.16 0.00 0.00 5.19
111 112 1.301716 GACAGCAAGTTGAGGGCGA 60.302 57.895 7.16 0.00 0.00 5.54
112 113 2.328099 GGACAGCAAGTTGAGGGCG 61.328 63.158 7.16 0.00 0.00 6.13
113 114 0.823356 TTGGACAGCAAGTTGAGGGC 60.823 55.000 7.16 0.00 0.00 5.19
114 115 0.954452 GTTGGACAGCAAGTTGAGGG 59.046 55.000 7.16 0.00 0.00 4.30
115 116 1.334869 GTGTTGGACAGCAAGTTGAGG 59.665 52.381 7.16 0.00 0.00 3.86
116 117 2.292267 AGTGTTGGACAGCAAGTTGAG 58.708 47.619 7.16 0.27 0.00 3.02
117 118 2.418368 AGTGTTGGACAGCAAGTTGA 57.582 45.000 7.16 0.00 0.00 3.18
118 119 2.549754 CCTAGTGTTGGACAGCAAGTTG 59.450 50.000 0.00 0.00 0.00 3.16
119 120 2.438021 TCCTAGTGTTGGACAGCAAGTT 59.562 45.455 0.00 0.00 0.00 2.66
120 121 2.047061 TCCTAGTGTTGGACAGCAAGT 58.953 47.619 0.00 0.00 0.00 3.16
121 122 2.808543 GTTCCTAGTGTTGGACAGCAAG 59.191 50.000 0.00 0.00 32.65 4.01
122 123 2.805295 CGTTCCTAGTGTTGGACAGCAA 60.805 50.000 0.00 0.00 32.65 3.91
123 124 1.270094 CGTTCCTAGTGTTGGACAGCA 60.270 52.381 0.00 0.00 32.65 4.41
124 125 1.429463 CGTTCCTAGTGTTGGACAGC 58.571 55.000 0.00 0.00 32.65 4.40
125 126 1.337823 CCCGTTCCTAGTGTTGGACAG 60.338 57.143 0.00 0.00 32.65 3.51
126 127 0.682852 CCCGTTCCTAGTGTTGGACA 59.317 55.000 0.00 0.00 32.65 4.02
127 128 0.683412 ACCCGTTCCTAGTGTTGGAC 59.317 55.000 0.00 0.00 32.65 4.02
128 129 1.071071 CAACCCGTTCCTAGTGTTGGA 59.929 52.381 0.00 0.00 34.21 3.53
129 130 1.519408 CAACCCGTTCCTAGTGTTGG 58.481 55.000 0.00 0.00 34.21 3.77
130 131 0.872388 GCAACCCGTTCCTAGTGTTG 59.128 55.000 0.00 0.00 39.35 3.33
131 132 0.250597 GGCAACCCGTTCCTAGTGTT 60.251 55.000 0.00 0.00 0.00 3.32
132 133 1.373812 GGCAACCCGTTCCTAGTGT 59.626 57.895 0.00 0.00 0.00 3.55
133 134 0.673644 CTGGCAACCCGTTCCTAGTG 60.674 60.000 0.00 0.00 0.00 2.74
134 135 1.677552 CTGGCAACCCGTTCCTAGT 59.322 57.895 0.00 0.00 0.00 2.57
135 136 1.745489 GCTGGCAACCCGTTCCTAG 60.745 63.158 0.00 0.00 0.00 3.02
136 137 2.349755 GCTGGCAACCCGTTCCTA 59.650 61.111 0.00 0.00 0.00 2.94
137 138 4.660938 GGCTGGCAACCCGTTCCT 62.661 66.667 0.00 0.00 0.00 3.36
148 149 4.838152 TCGATTCTGGCGGCTGGC 62.838 66.667 13.15 13.15 42.51 4.85
149 150 1.524621 AATCGATTCTGGCGGCTGG 60.525 57.895 15.75 6.13 0.00 4.85
150 151 1.645455 CAATCGATTCTGGCGGCTG 59.355 57.895 7.92 10.52 0.00 4.85
151 152 2.182842 GCAATCGATTCTGGCGGCT 61.183 57.895 7.92 0.00 0.00 5.52
152 153 2.329339 GCAATCGATTCTGGCGGC 59.671 61.111 7.92 0.00 0.00 6.53
153 154 1.168407 ATGGCAATCGATTCTGGCGG 61.168 55.000 7.92 0.00 40.82 6.13
154 155 0.040692 CATGGCAATCGATTCTGGCG 60.041 55.000 7.92 0.00 40.82 5.69
155 156 0.318445 GCATGGCAATCGATTCTGGC 60.318 55.000 14.85 14.85 38.54 4.85
156 157 0.313043 GGCATGGCAATCGATTCTGG 59.687 55.000 15.47 0.00 0.00 3.86
157 158 1.001706 CAGGCATGGCAATCGATTCTG 60.002 52.381 22.64 7.00 0.00 3.02
158 159 1.315690 CAGGCATGGCAATCGATTCT 58.684 50.000 22.64 0.00 0.00 2.40
159 160 0.313043 CCAGGCATGGCAATCGATTC 59.687 55.000 22.64 3.47 40.52 2.52
160 161 2.422303 CCAGGCATGGCAATCGATT 58.578 52.632 22.64 4.39 40.52 3.34
161 162 4.169271 CCAGGCATGGCAATCGAT 57.831 55.556 22.64 0.00 40.52 3.59
170 171 3.548745 TGATGTAGTTCTCCAGGCATG 57.451 47.619 0.00 0.00 0.00 4.06
171 172 3.181447 CCATGATGTAGTTCTCCAGGCAT 60.181 47.826 0.00 0.00 0.00 4.40
172 173 2.171237 CCATGATGTAGTTCTCCAGGCA 59.829 50.000 0.00 0.00 0.00 4.75
173 174 2.435805 TCCATGATGTAGTTCTCCAGGC 59.564 50.000 0.00 0.00 0.00 4.85
174 175 4.446371 GTTCCATGATGTAGTTCTCCAGG 58.554 47.826 0.00 0.00 0.00 4.45
175 176 4.446371 GGTTCCATGATGTAGTTCTCCAG 58.554 47.826 0.00 0.00 0.00 3.86
176 177 3.199946 GGGTTCCATGATGTAGTTCTCCA 59.800 47.826 0.00 0.00 0.00 3.86
177 178 3.741388 CGGGTTCCATGATGTAGTTCTCC 60.741 52.174 0.00 0.00 0.00 3.71
178 179 3.118738 ACGGGTTCCATGATGTAGTTCTC 60.119 47.826 0.00 0.00 0.00 2.87
179 180 2.838202 ACGGGTTCCATGATGTAGTTCT 59.162 45.455 0.00 0.00 0.00 3.01
180 181 3.195661 GACGGGTTCCATGATGTAGTTC 58.804 50.000 0.00 0.00 0.00 3.01
181 182 2.093128 GGACGGGTTCCATGATGTAGTT 60.093 50.000 0.00 0.00 45.10 2.24
182 183 1.485066 GGACGGGTTCCATGATGTAGT 59.515 52.381 0.00 0.00 45.10 2.73
183 184 2.240493 GGACGGGTTCCATGATGTAG 57.760 55.000 0.00 0.00 45.10 2.74
192 193 0.248565 GACTAAGGTGGACGGGTTCC 59.751 60.000 0.00 0.00 46.13 3.62
193 194 0.248565 GGACTAAGGTGGACGGGTTC 59.751 60.000 0.00 0.00 0.00 3.62
194 195 0.472352 TGGACTAAGGTGGACGGGTT 60.472 55.000 0.00 0.00 0.00 4.11
195 196 0.472352 TTGGACTAAGGTGGACGGGT 60.472 55.000 0.00 0.00 0.00 5.28
196 197 0.688487 TTTGGACTAAGGTGGACGGG 59.312 55.000 0.00 0.00 0.00 5.28
197 198 2.224450 ACTTTTGGACTAAGGTGGACGG 60.224 50.000 0.00 0.00 0.00 4.79
198 199 3.121738 ACTTTTGGACTAAGGTGGACG 57.878 47.619 0.00 0.00 0.00 4.79
199 200 4.715713 AGAACTTTTGGACTAAGGTGGAC 58.284 43.478 0.00 0.00 0.00 4.02
200 201 4.410883 TGAGAACTTTTGGACTAAGGTGGA 59.589 41.667 0.00 0.00 0.00 4.02
201 202 4.714632 TGAGAACTTTTGGACTAAGGTGG 58.285 43.478 0.00 0.00 0.00 4.61
202 203 6.693315 TTTGAGAACTTTTGGACTAAGGTG 57.307 37.500 0.00 0.00 0.00 4.00
203 204 5.299531 GCTTTGAGAACTTTTGGACTAAGGT 59.700 40.000 0.00 0.00 0.00 3.50
204 205 5.560953 CGCTTTGAGAACTTTTGGACTAAGG 60.561 44.000 0.00 0.00 0.00 2.69
205 206 5.236478 TCGCTTTGAGAACTTTTGGACTAAG 59.764 40.000 0.00 0.00 0.00 2.18
206 207 5.120399 TCGCTTTGAGAACTTTTGGACTAA 58.880 37.500 0.00 0.00 0.00 2.24
207 208 4.699637 TCGCTTTGAGAACTTTTGGACTA 58.300 39.130 0.00 0.00 0.00 2.59
208 209 3.541632 TCGCTTTGAGAACTTTTGGACT 58.458 40.909 0.00 0.00 0.00 3.85
209 210 3.963383 TCGCTTTGAGAACTTTTGGAC 57.037 42.857 0.00 0.00 0.00 4.02
210 211 4.974368 TTTCGCTTTGAGAACTTTTGGA 57.026 36.364 0.00 0.00 0.00 3.53
211 212 5.400485 CAGATTTCGCTTTGAGAACTTTTGG 59.600 40.000 0.00 0.00 0.00 3.28
212 213 5.108103 GCAGATTTCGCTTTGAGAACTTTTG 60.108 40.000 0.00 0.00 0.00 2.44
213 214 4.978580 GCAGATTTCGCTTTGAGAACTTTT 59.021 37.500 0.00 0.00 0.00 2.27
214 215 4.540824 GCAGATTTCGCTTTGAGAACTTT 58.459 39.130 0.00 0.00 0.00 2.66
215 216 3.364366 CGCAGATTTCGCTTTGAGAACTT 60.364 43.478 0.00 0.00 0.00 2.66
216 217 2.158449 CGCAGATTTCGCTTTGAGAACT 59.842 45.455 0.00 0.00 0.00 3.01
217 218 2.096218 ACGCAGATTTCGCTTTGAGAAC 60.096 45.455 0.00 0.00 0.00 3.01
218 219 2.143122 ACGCAGATTTCGCTTTGAGAA 58.857 42.857 0.00 0.00 0.00 2.87
219 220 1.726791 GACGCAGATTTCGCTTTGAGA 59.273 47.619 0.00 0.00 0.00 3.27
220 221 1.201965 GGACGCAGATTTCGCTTTGAG 60.202 52.381 0.00 0.00 0.00 3.02
221 222 0.796312 GGACGCAGATTTCGCTTTGA 59.204 50.000 0.00 0.00 0.00 2.69
222 223 0.179189 GGGACGCAGATTTCGCTTTG 60.179 55.000 0.00 0.00 0.00 2.77
223 224 0.605319 TGGGACGCAGATTTCGCTTT 60.605 50.000 0.00 0.00 0.00 3.51
224 225 0.392998 ATGGGACGCAGATTTCGCTT 60.393 50.000 0.00 0.00 0.00 4.68
225 226 0.464036 TATGGGACGCAGATTTCGCT 59.536 50.000 0.00 0.00 0.00 4.93
226 227 1.195448 CATATGGGACGCAGATTTCGC 59.805 52.381 0.00 0.00 0.00 4.70
227 228 1.800586 CCATATGGGACGCAGATTTCG 59.199 52.381 14.52 0.00 40.01 3.46
228 229 3.126001 TCCATATGGGACGCAGATTTC 57.874 47.619 21.78 0.00 42.15 2.17
238 239 0.468226 GTGCGGAGTTCCATATGGGA 59.532 55.000 21.78 10.84 46.61 4.37
239 240 0.535102 GGTGCGGAGTTCCATATGGG 60.535 60.000 21.78 5.52 35.14 4.00
240 241 0.535102 GGGTGCGGAGTTCCATATGG 60.535 60.000 16.25 16.25 35.14 2.74
241 242 0.180171 TGGGTGCGGAGTTCCATATG 59.820 55.000 0.00 0.00 35.14 1.78
242 243 0.916086 TTGGGTGCGGAGTTCCATAT 59.084 50.000 0.00 0.00 35.14 1.78
243 244 0.251916 CTTGGGTGCGGAGTTCCATA 59.748 55.000 0.00 0.00 35.14 2.74
244 245 1.002134 CTTGGGTGCGGAGTTCCAT 60.002 57.895 0.00 0.00 35.14 3.41
245 246 2.391724 GACTTGGGTGCGGAGTTCCA 62.392 60.000 0.00 0.00 35.14 3.53
246 247 1.671379 GACTTGGGTGCGGAGTTCC 60.671 63.158 0.00 0.00 0.00 3.62
247 248 0.534203 TTGACTTGGGTGCGGAGTTC 60.534 55.000 0.00 0.00 0.00 3.01
248 249 0.535102 CTTGACTTGGGTGCGGAGTT 60.535 55.000 0.00 0.00 0.00 3.01
249 250 1.071471 CTTGACTTGGGTGCGGAGT 59.929 57.895 0.00 0.00 0.00 3.85
250 251 2.328099 GCTTGACTTGGGTGCGGAG 61.328 63.158 0.00 0.00 0.00 4.63
251 252 2.281484 GCTTGACTTGGGTGCGGA 60.281 61.111 0.00 0.00 0.00 5.54
252 253 2.594303 TGCTTGACTTGGGTGCGG 60.594 61.111 0.00 0.00 0.00 5.69
253 254 0.602638 TACTGCTTGACTTGGGTGCG 60.603 55.000 0.00 0.00 0.00 5.34
254 255 1.160137 CTACTGCTTGACTTGGGTGC 58.840 55.000 0.00 0.00 0.00 5.01
255 256 2.146342 CACTACTGCTTGACTTGGGTG 58.854 52.381 0.00 0.00 0.00 4.61
256 257 1.072331 CCACTACTGCTTGACTTGGGT 59.928 52.381 0.00 0.00 0.00 4.51
257 258 1.611673 CCCACTACTGCTTGACTTGGG 60.612 57.143 0.00 0.00 36.49 4.12
258 259 1.813513 CCCACTACTGCTTGACTTGG 58.186 55.000 0.00 0.00 0.00 3.61
259 260 1.160137 GCCCACTACTGCTTGACTTG 58.840 55.000 0.00 0.00 0.00 3.16
260 261 0.764890 TGCCCACTACTGCTTGACTT 59.235 50.000 0.00 0.00 0.00 3.01
261 262 0.322975 CTGCCCACTACTGCTTGACT 59.677 55.000 0.00 0.00 0.00 3.41
262 263 0.035458 ACTGCCCACTACTGCTTGAC 59.965 55.000 0.00 0.00 0.00 3.18
263 264 0.035317 CACTGCCCACTACTGCTTGA 59.965 55.000 0.00 0.00 0.00 3.02
264 265 0.957395 CCACTGCCCACTACTGCTTG 60.957 60.000 0.00 0.00 0.00 4.01
265 266 1.376466 CCACTGCCCACTACTGCTT 59.624 57.895 0.00 0.00 0.00 3.91
266 267 1.831652 GACCACTGCCCACTACTGCT 61.832 60.000 0.00 0.00 0.00 4.24
267 268 1.376037 GACCACTGCCCACTACTGC 60.376 63.158 0.00 0.00 0.00 4.40
268 269 1.296715 GGACCACTGCCCACTACTG 59.703 63.158 0.00 0.00 0.00 2.74
269 270 2.283529 CGGACCACTGCCCACTACT 61.284 63.158 0.00 0.00 0.00 2.57
270 271 2.227089 CTCGGACCACTGCCCACTAC 62.227 65.000 0.00 0.00 0.00 2.73
271 272 1.982395 CTCGGACCACTGCCCACTA 60.982 63.158 0.00 0.00 0.00 2.74
272 273 3.314331 CTCGGACCACTGCCCACT 61.314 66.667 0.00 0.00 0.00 4.00
273 274 2.660064 ATCTCGGACCACTGCCCAC 61.660 63.158 0.00 0.00 0.00 4.61
274 275 2.284625 ATCTCGGACCACTGCCCA 60.285 61.111 0.00 0.00 0.00 5.36
275 276 2.187946 CATCTCGGACCACTGCCC 59.812 66.667 0.00 0.00 0.00 5.36
276 277 2.187946 CCATCTCGGACCACTGCC 59.812 66.667 0.00 0.00 36.56 4.85
277 278 3.298958 TCCATCTCGGACCACTGC 58.701 61.111 0.00 0.00 39.64 4.40
284 285 0.323633 TTGGGTACGTCCATCTCGGA 60.324 55.000 0.00 0.00 43.61 4.55
285 286 0.102481 CTTGGGTACGTCCATCTCGG 59.898 60.000 0.00 0.00 36.58 4.63
286 287 0.102481 CCTTGGGTACGTCCATCTCG 59.898 60.000 0.00 0.00 36.58 4.04
287 288 0.179081 GCCTTGGGTACGTCCATCTC 60.179 60.000 0.00 0.00 36.58 2.75
288 289 0.907704 TGCCTTGGGTACGTCCATCT 60.908 55.000 0.00 0.00 36.58 2.90
289 290 0.462047 CTGCCTTGGGTACGTCCATC 60.462 60.000 0.00 0.00 36.58 3.51
290 291 1.198759 ACTGCCTTGGGTACGTCCAT 61.199 55.000 0.00 0.00 36.58 3.41
291 292 0.542467 TACTGCCTTGGGTACGTCCA 60.542 55.000 0.00 0.00 38.11 4.02
292 293 0.609662 TTACTGCCTTGGGTACGTCC 59.390 55.000 0.00 0.00 0.00 4.79
293 294 2.005560 GCTTACTGCCTTGGGTACGTC 61.006 57.143 0.00 0.00 35.15 4.34
294 295 0.036671 GCTTACTGCCTTGGGTACGT 60.037 55.000 0.00 0.00 35.15 3.57
295 296 0.036765 TGCTTACTGCCTTGGGTACG 60.037 55.000 0.00 0.00 42.00 3.67
296 297 1.679032 CCTGCTTACTGCCTTGGGTAC 60.679 57.143 0.00 0.00 42.00 3.34
297 298 0.618458 CCTGCTTACTGCCTTGGGTA 59.382 55.000 0.00 0.00 42.00 3.69
298 299 1.380302 CCTGCTTACTGCCTTGGGT 59.620 57.895 0.00 0.00 42.00 4.51
299 300 0.251341 AACCTGCTTACTGCCTTGGG 60.251 55.000 0.00 0.00 42.00 4.12
300 301 1.270550 CAAACCTGCTTACTGCCTTGG 59.729 52.381 0.00 0.00 42.00 3.61
301 302 1.336240 GCAAACCTGCTTACTGCCTTG 60.336 52.381 0.00 0.00 45.74 3.61
302 303 0.961753 GCAAACCTGCTTACTGCCTT 59.038 50.000 0.00 0.00 45.74 4.35
303 304 2.646121 GCAAACCTGCTTACTGCCT 58.354 52.632 0.00 0.00 45.74 4.75
313 314 2.750237 GGCTACCCGGCAAACCTG 60.750 66.667 0.00 0.00 38.25 4.00
314 315 3.253838 TGGCTACCCGGCAAACCT 61.254 61.111 0.00 0.00 46.25 3.50
320 321 3.942439 GGAGGATGGCTACCCGGC 61.942 72.222 0.00 0.00 38.97 6.13
321 322 3.242291 GGGAGGATGGCTACCCGG 61.242 72.222 0.00 0.00 32.73 5.73
322 323 2.044806 CTTGGGAGGATGGCTACCCG 62.045 65.000 0.00 0.00 44.70 5.28
323 324 0.988678 ACTTGGGAGGATGGCTACCC 60.989 60.000 0.00 0.00 42.37 3.69
324 325 0.181350 CACTTGGGAGGATGGCTACC 59.819 60.000 0.00 0.00 0.00 3.18
325 326 0.912486 ACACTTGGGAGGATGGCTAC 59.088 55.000 0.00 0.00 0.00 3.58
326 327 1.559682 GAACACTTGGGAGGATGGCTA 59.440 52.381 0.00 0.00 0.00 3.93
327 328 0.329596 GAACACTTGGGAGGATGGCT 59.670 55.000 0.00 0.00 0.00 4.75
328 329 1.026718 CGAACACTTGGGAGGATGGC 61.027 60.000 0.00 0.00 0.00 4.40
329 330 0.324943 ACGAACACTTGGGAGGATGG 59.675 55.000 0.00 0.00 0.00 3.51
330 331 2.893637 CTACGAACACTTGGGAGGATG 58.106 52.381 0.00 0.00 0.00 3.51
331 332 1.207329 GCTACGAACACTTGGGAGGAT 59.793 52.381 0.00 0.00 0.00 3.24
332 333 0.606604 GCTACGAACACTTGGGAGGA 59.393 55.000 0.00 0.00 0.00 3.71
333 334 0.320374 TGCTACGAACACTTGGGAGG 59.680 55.000 0.00 0.00 0.00 4.30
334 335 2.163818 TTGCTACGAACACTTGGGAG 57.836 50.000 0.00 0.00 0.00 4.30
335 336 2.103432 TCTTTGCTACGAACACTTGGGA 59.897 45.455 0.00 0.00 0.00 4.37
336 337 2.489971 TCTTTGCTACGAACACTTGGG 58.510 47.619 0.00 0.00 0.00 4.12
337 338 3.498397 ACATCTTTGCTACGAACACTTGG 59.502 43.478 0.00 0.00 0.00 3.61
338 339 4.211164 TCACATCTTTGCTACGAACACTTG 59.789 41.667 0.00 0.00 0.00 3.16
339 340 4.377021 TCACATCTTTGCTACGAACACTT 58.623 39.130 0.00 0.00 0.00 3.16
340 341 3.990092 TCACATCTTTGCTACGAACACT 58.010 40.909 0.00 0.00 0.00 3.55
341 342 4.388773 TGATCACATCTTTGCTACGAACAC 59.611 41.667 0.00 0.00 0.00 3.32
342 343 4.565022 TGATCACATCTTTGCTACGAACA 58.435 39.130 0.00 0.00 0.00 3.18
343 344 5.530519 TTGATCACATCTTTGCTACGAAC 57.469 39.130 0.00 0.00 0.00 3.95
344 345 6.108687 AGATTGATCACATCTTTGCTACGAA 58.891 36.000 12.07 0.00 0.00 3.85
345 346 5.664457 AGATTGATCACATCTTTGCTACGA 58.336 37.500 12.07 0.00 0.00 3.43
346 347 5.980698 AGATTGATCACATCTTTGCTACG 57.019 39.130 12.07 0.00 0.00 3.51
347 348 7.254727 GGAGAAGATTGATCACATCTTTGCTAC 60.255 40.741 22.73 16.85 35.06 3.58
348 349 6.765036 GGAGAAGATTGATCACATCTTTGCTA 59.235 38.462 22.73 0.00 35.06 3.49
349 350 5.589452 GGAGAAGATTGATCACATCTTTGCT 59.411 40.000 22.73 18.49 35.06 3.91
350 351 5.356190 TGGAGAAGATTGATCACATCTTTGC 59.644 40.000 22.73 18.78 35.06 3.68
351 352 6.997239 TGGAGAAGATTGATCACATCTTTG 57.003 37.500 22.73 0.00 35.06 2.77
352 353 6.093219 CGTTGGAGAAGATTGATCACATCTTT 59.907 38.462 22.73 16.43 35.06 2.52
353 354 5.583854 CGTTGGAGAAGATTGATCACATCTT 59.416 40.000 22.35 22.35 37.36 2.40
354 355 5.114780 CGTTGGAGAAGATTGATCACATCT 58.885 41.667 12.07 12.07 0.00 2.90
355 356 4.872691 ACGTTGGAGAAGATTGATCACATC 59.127 41.667 0.00 2.41 0.00 3.06
356 357 4.633126 CACGTTGGAGAAGATTGATCACAT 59.367 41.667 0.00 0.00 0.00 3.21
357 358 3.996363 CACGTTGGAGAAGATTGATCACA 59.004 43.478 0.00 0.00 0.00 3.58
358 359 3.372206 CCACGTTGGAGAAGATTGATCAC 59.628 47.826 0.00 0.00 40.96 3.06
359 360 3.599343 CCACGTTGGAGAAGATTGATCA 58.401 45.455 0.00 0.00 40.96 2.92
360 361 2.939103 CCCACGTTGGAGAAGATTGATC 59.061 50.000 0.00 0.00 40.96 2.92
361 362 2.356125 CCCCACGTTGGAGAAGATTGAT 60.356 50.000 7.36 0.00 40.96 2.57
362 363 1.003118 CCCCACGTTGGAGAAGATTGA 59.997 52.381 7.36 0.00 40.96 2.57
363 364 1.271379 ACCCCACGTTGGAGAAGATTG 60.271 52.381 7.36 0.00 40.96 2.67
364 365 1.064825 ACCCCACGTTGGAGAAGATT 58.935 50.000 7.36 0.00 40.96 2.40
365 366 1.064825 AACCCCACGTTGGAGAAGAT 58.935 50.000 7.36 0.00 40.96 2.40
366 367 1.621814 CTAACCCCACGTTGGAGAAGA 59.378 52.381 7.36 0.00 40.96 2.87
367 368 1.621814 TCTAACCCCACGTTGGAGAAG 59.378 52.381 7.36 1.32 40.96 2.85
368 369 1.719529 TCTAACCCCACGTTGGAGAA 58.280 50.000 7.36 0.00 40.96 2.87
369 370 1.946984 ATCTAACCCCACGTTGGAGA 58.053 50.000 7.36 2.55 44.20 3.71
370 371 2.781681 AATCTAACCCCACGTTGGAG 57.218 50.000 7.36 0.00 44.20 3.86
371 372 3.512219 AAAATCTAACCCCACGTTGGA 57.488 42.857 7.36 0.00 44.96 3.53
372 373 3.824443 AGAAAAATCTAACCCCACGTTGG 59.176 43.478 0.00 0.00 35.79 3.77
373 374 4.082949 GGAGAAAAATCTAACCCCACGTTG 60.083 45.833 0.00 0.00 35.79 4.10
374 375 4.077108 GGAGAAAAATCTAACCCCACGTT 58.923 43.478 0.00 0.00 38.57 3.99
375 376 3.073356 TGGAGAAAAATCTAACCCCACGT 59.927 43.478 0.00 0.00 0.00 4.49
376 377 3.681593 TGGAGAAAAATCTAACCCCACG 58.318 45.455 0.00 0.00 0.00 4.94
377 378 5.125578 GTCATGGAGAAAAATCTAACCCCAC 59.874 44.000 0.00 0.00 0.00 4.61
378 379 5.222233 TGTCATGGAGAAAAATCTAACCCCA 60.222 40.000 0.00 0.00 0.00 4.96
379 380 5.125578 GTGTCATGGAGAAAAATCTAACCCC 59.874 44.000 0.00 0.00 0.00 4.95
380 381 5.125578 GGTGTCATGGAGAAAAATCTAACCC 59.874 44.000 0.00 0.00 0.00 4.11
395 396 1.069204 CCAGGTCGATAGGTGTCATGG 59.931 57.143 0.00 0.00 0.00 3.66
396 397 2.031870 TCCAGGTCGATAGGTGTCATG 58.968 52.381 0.00 0.00 0.00 3.07
434 436 7.392113 AGTCTAAAGTAGTGCGAGCATCTATAT 59.608 37.037 0.00 0.00 0.00 0.86
486 489 9.920826 GCTAACGCTTACATATACGTATATACA 57.079 33.333 24.07 13.88 37.87 2.29
525 549 9.725019 AATAGAAAGCCCAAATCCTTTTAAAAG 57.275 29.630 19.19 19.19 31.85 2.27
529 553 7.453126 TCACAATAGAAAGCCCAAATCCTTTTA 59.547 33.333 0.00 0.00 31.85 1.52
534 559 5.659440 TTCACAATAGAAAGCCCAAATCC 57.341 39.130 0.00 0.00 0.00 3.01
604 648 2.143122 CCAGAAAACTGCGAGCACTAA 58.857 47.619 0.00 0.00 0.00 2.24
642 686 8.896744 TCTTCTCTTACCGAACGAATATTTCTA 58.103 33.333 0.00 0.00 0.00 2.10
660 704 4.608948 ATCAACACGAAGGTCTTCTCTT 57.391 40.909 8.79 0.00 37.44 2.85
708 752 3.064271 GCCGGCGTAACATCTGAAAATTA 59.936 43.478 12.58 0.00 0.00 1.40
723 767 1.479323 TCAAAGATACTAAGCCGGCGT 59.521 47.619 23.20 22.12 0.00 5.68
726 770 3.821421 ACCTCAAAGATACTAAGCCGG 57.179 47.619 0.00 0.00 0.00 6.13
740 784 0.177141 GCACGCATACCCTACCTCAA 59.823 55.000 0.00 0.00 0.00 3.02
747 791 0.539518 TGTACATGCACGCATACCCT 59.460 50.000 3.80 0.00 34.91 4.34
748 792 1.593196 ATGTACATGCACGCATACCC 58.407 50.000 7.78 0.00 34.91 3.69
792 854 7.330900 AGATGCCCACGTATACATATAGTAC 57.669 40.000 3.32 0.00 35.05 2.73
852 1946 2.029020 GGCAAGGAATCTGGTTTGGTTC 60.029 50.000 0.00 0.00 0.00 3.62
1004 2100 6.828785 TGGAAAAGGAGTAAGAATGGATTAGC 59.171 38.462 0.00 0.00 0.00 3.09
1018 2116 5.906772 TTTCCTCTTAGTGGAAAAGGAGT 57.093 39.130 21.63 0.00 46.70 3.85
1035 2133 5.071653 AGAGCAAAGAAGAGAAGAGTTTCCT 59.928 40.000 0.00 0.00 33.64 3.36
1036 2134 5.304778 AGAGCAAAGAAGAGAAGAGTTTCC 58.695 41.667 0.00 0.00 33.64 3.13
1037 2135 6.705825 AGAAGAGCAAAGAAGAGAAGAGTTTC 59.294 38.462 0.00 0.00 0.00 2.78
1038 2136 6.482973 CAGAAGAGCAAAGAAGAGAAGAGTTT 59.517 38.462 0.00 0.00 0.00 2.66
1039 2137 5.990996 CAGAAGAGCAAAGAAGAGAAGAGTT 59.009 40.000 0.00 0.00 0.00 3.01
1040 2138 5.540911 CAGAAGAGCAAAGAAGAGAAGAGT 58.459 41.667 0.00 0.00 0.00 3.24
1347 2658 2.564062 CACAAATTGGCAGGGACAGAAT 59.436 45.455 0.00 0.00 0.00 2.40
1373 2684 1.822990 ACCGTGATCTTTTCGCTCCTA 59.177 47.619 0.00 0.00 32.41 2.94
1797 3196 5.764686 GGAATTTTGGTTCTCCTTTTTGCAT 59.235 36.000 0.00 0.00 34.23 3.96
1844 3261 4.527157 GAGCGCGCCAAGTGATGC 62.527 66.667 30.33 2.03 0.00 3.91
1904 3348 5.451798 CCCGAAATACTCCCCAAAATGATTG 60.452 44.000 0.00 0.00 0.00 2.67
1961 3405 3.989787 GCCTGGCCCAAAACACGG 61.990 66.667 7.66 0.00 0.00 4.94
1962 3406 3.989787 GGCCTGGCCCAAAACACG 61.990 66.667 27.77 0.00 44.06 4.49
2149 3613 0.108709 AAATCCAATGCGCGCACAAT 60.109 45.000 39.05 23.04 0.00 2.71
2158 3622 7.344910 TGAAACATAACGAAAAATCCAATGC 57.655 32.000 0.00 0.00 0.00 3.56
2294 3767 3.953612 GGGGATTGCATGACAGTTTCATA 59.046 43.478 0.00 0.00 43.68 2.15
2458 3931 8.800370 ACTTTTTAACCAAACAACCAATTCAT 57.200 26.923 0.00 0.00 0.00 2.57
2512 3985 2.119495 CTGCTTACACCCTATGTCCCT 58.881 52.381 0.00 0.00 42.09 4.20
2513 3986 2.103263 CTCTGCTTACACCCTATGTCCC 59.897 54.545 0.00 0.00 42.09 4.46
2514 3987 2.766828 ACTCTGCTTACACCCTATGTCC 59.233 50.000 0.00 0.00 42.09 4.02
2515 3988 4.888239 TCTACTCTGCTTACACCCTATGTC 59.112 45.833 0.00 0.00 42.09 3.06
2516 3989 4.868268 TCTACTCTGCTTACACCCTATGT 58.132 43.478 0.00 0.00 46.06 2.29
2517 3990 6.943146 TCTATCTACTCTGCTTACACCCTATG 59.057 42.308 0.00 0.00 0.00 2.23
2518 3991 7.092748 TCTATCTACTCTGCTTACACCCTAT 57.907 40.000 0.00 0.00 0.00 2.57
2519 3992 6.511017 TCTATCTACTCTGCTTACACCCTA 57.489 41.667 0.00 0.00 0.00 3.53
3255 4834 0.531532 GCTACCTGCATGCATCGACT 60.532 55.000 22.97 4.47 42.31 4.18
3399 5028 6.055588 GCTCCAAACCTATGTCTGCTATTTA 58.944 40.000 0.00 0.00 0.00 1.40
3434 5064 0.106708 GGAGCAGTGGGATTCGCATA 59.893 55.000 6.70 0.00 0.00 3.14
3683 5315 4.072131 GCCACAACAGGAACAGAATAAGA 58.928 43.478 0.00 0.00 0.00 2.10
3897 5529 2.479049 CCTATACTGGTGACCGTGTTCG 60.479 54.545 5.46 0.00 0.00 3.95
3990 5622 6.640925 TCTAATATAGGCCCCTAAAGAGGTT 58.359 40.000 0.00 0.00 41.95 3.50
4100 5734 3.285484 TCACTCCGTATGTAGTCCCTTC 58.715 50.000 0.00 0.00 0.00 3.46
4589 6232 5.105756 GCAGAACCACAGGTAAGCATTTTAT 60.106 40.000 0.00 0.00 33.12 1.40
4922 6565 5.991328 ACTACATAAATGGCATCTTGACG 57.009 39.130 0.00 0.00 0.00 4.35
5118 6761 1.425428 CAGGAAACGCAGGCGAATC 59.575 57.895 21.62 16.16 42.83 2.52
5303 6946 1.900545 CTCTCCGGTCCAGTTTCCCC 61.901 65.000 0.00 0.00 0.00 4.81
5562 7208 5.872617 TCACAATGTTCTATTGGTACCTTCG 59.127 40.000 14.36 0.00 33.56 3.79
5706 7386 5.829062 TTTTAAGCCTCCTGTGGTAAGTA 57.171 39.130 0.00 0.00 0.00 2.24
5761 7443 0.179111 CCGCGTCCTTATTCAGAGCA 60.179 55.000 4.92 0.00 0.00 4.26
5803 7485 6.494952 AGAGAGAAGTTCCAGACCAAGTATA 58.505 40.000 0.00 0.00 0.00 1.47
6021 7945 4.367386 CTTGTTGAGGAAGATTGCCATC 57.633 45.455 0.00 0.00 0.00 3.51
6140 8067 3.934579 GGCCATCGCAAAAAGATGAAAAT 59.065 39.130 0.00 0.00 46.09 1.82
6173 8106 3.067742 CCTTGAAATGACAGATCCATGCC 59.932 47.826 0.00 0.00 0.00 4.40
6179 8112 4.761739 TGTGGTTCCTTGAAATGACAGATC 59.238 41.667 0.00 0.00 0.00 2.75
6187 8120 3.490761 CGTTTGCTGTGGTTCCTTGAAAT 60.491 43.478 0.00 0.00 0.00 2.17
6404 8337 7.408756 CATTTTCTGGATTGGATTGACCTAA 57.591 36.000 0.00 0.00 39.86 2.69
6567 8500 8.849543 TGAGAACATAGTAAGGGTAAGGTAAT 57.150 34.615 0.00 0.00 0.00 1.89
6681 8614 1.307097 GCTCATTGGAGTGAGATGGC 58.693 55.000 8.01 0.00 46.77 4.40
6761 11277 7.447238 AGAGGATAAAGAGATAAGAGAGGAACG 59.553 40.741 0.00 0.00 0.00 3.95
6831 11348 3.874392 AAAATGGCCAAGTATGAGCAC 57.126 42.857 10.96 0.00 0.00 4.40
7001 11523 4.756642 TGGAAGCAGAGTAAAATGTGAGTG 59.243 41.667 0.00 0.00 0.00 3.51
7038 11563 3.216800 TGCATCTGGCTATGGATGTTTC 58.783 45.455 0.00 0.00 45.15 2.78
7257 12192 3.675613 TCCAGCCCAGGATAAGGATAAA 58.324 45.455 0.00 0.00 31.23 1.40
7354 12297 5.617528 TCACAACCTGACACCTAAGTTAA 57.382 39.130 0.00 0.00 0.00 2.01
7651 12612 9.292195 CTGGTGAAATAAGTACCCTTTTAGAAA 57.708 33.333 0.00 0.00 33.51 2.52
8057 13018 7.227156 ACTGTGTTCTCAAACTTGATTATCCT 58.773 34.615 0.00 0.00 36.46 3.24
8157 13118 0.608130 ATACTGGCAGCGACTGAACA 59.392 50.000 15.89 7.47 32.44 3.18
8488 13451 5.128499 TGTTGGTTGTGATGAAAGTGGAAAT 59.872 36.000 0.00 0.00 0.00 2.17
8524 13487 3.159472 TGTTCCAATGCTTGAGAATGCT 58.841 40.909 0.00 0.00 0.00 3.79
8622 13585 2.122783 ACCCCGTGTTATTCATGTGG 57.877 50.000 0.00 0.00 36.79 4.17
8813 13776 1.135859 CATGTTGTCAGGAGCTTTCGC 60.136 52.381 0.00 0.00 0.00 4.70
8828 13791 0.459489 AACTGTTTGTGCGGCATGTT 59.541 45.000 5.72 2.65 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.