Multiple sequence alignment - TraesCS5B01G093600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G093600 chr5B 100.000 6198 0 0 1 6198 122838347 122844544 0.000000e+00 11446.0
1 TraesCS5B01G093600 chr5B 99.275 414 2 1 5786 6198 462132861 462133274 0.000000e+00 747.0
2 TraesCS5B01G093600 chr5B 98.313 415 5 2 5785 6198 122830382 122829969 0.000000e+00 726.0
3 TraesCS5B01G093600 chr5D 94.078 5860 244 54 1 5786 109820209 109814379 0.000000e+00 8804.0
4 TraesCS5B01G093600 chr5D 91.797 256 11 3 5541 5786 99924792 99924537 1.280000e-91 348.0
5 TraesCS5B01G093600 chr5D 77.130 446 74 19 4 423 504091819 504091376 3.740000e-57 233.0
6 TraesCS5B01G093600 chr5A 93.452 5223 222 60 537 5663 117493748 117498946 0.000000e+00 7640.0
7 TraesCS5B01G093600 chr5A 91.304 391 19 6 5408 5783 102834921 102835311 2.560000e-143 520.0
8 TraesCS5B01G093600 chr3B 98.798 416 4 1 5784 6198 84892336 84891921 0.000000e+00 739.0
9 TraesCS5B01G093600 chr3B 98.561 417 4 2 5781 6196 4258278 4257863 0.000000e+00 736.0
10 TraesCS5B01G093600 chr3B 80.123 488 65 14 4 459 821758569 821758082 9.960000e-88 335.0
11 TraesCS5B01G093600 chr3B 79.193 471 72 14 16 460 691284980 691284510 2.810000e-78 303.0
12 TraesCS5B01G093600 chr7B 98.313 415 6 1 5785 6198 511905933 511906347 0.000000e+00 726.0
13 TraesCS5B01G093600 chr7B 98.309 414 7 0 5785 6198 676973387 676972974 0.000000e+00 726.0
14 TraesCS5B01G093600 chr4A 98.313 415 6 1 5785 6198 722344389 722344803 0.000000e+00 726.0
15 TraesCS5B01G093600 chr4A 78.029 487 77 17 1 460 69305627 69306110 4.730000e-71 279.0
16 TraesCS5B01G093600 chr2B 98.313 415 6 1 5785 6198 556430876 556431290 0.000000e+00 726.0
17 TraesCS5B01G093600 chr2B 80.843 261 44 5 4 260 74244344 74244086 3.790000e-47 200.0
18 TraesCS5B01G093600 chr2A 97.418 426 5 4 5775 6198 585808826 585809247 0.000000e+00 721.0
19 TraesCS5B01G093600 chr2A 80.000 255 49 2 5 257 637233244 637233498 2.950000e-43 187.0
20 TraesCS5B01G093600 chr7D 80.992 484 63 17 1 458 635663199 635663679 2.120000e-94 357.0
21 TraesCS5B01G093600 chr1B 80.619 485 64 12 2 459 26425589 26425108 1.280000e-91 348.0
22 TraesCS5B01G093600 chr6B 92.369 249 9 2 5548 5786 184015746 184015498 4.600000e-91 346.0
23 TraesCS5B01G093600 chr6B 78.557 485 76 12 1 459 439524333 439524815 1.690000e-75 294.0
24 TraesCS5B01G093600 chr7A 80.083 482 68 11 1 456 719360778 719360299 3.580000e-87 333.0
25 TraesCS5B01G093600 chr2D 79.794 485 70 14 1 458 131775184 131775667 1.670000e-85 327.0
26 TraesCS5B01G093600 chr2D 78.093 493 76 16 1 464 645665885 645666374 3.660000e-72 283.0
27 TraesCS5B01G093600 chr2D 77.386 482 78 21 1 454 543288624 543288146 2.220000e-64 257.0
28 TraesCS5B01G093600 chr2D 87.755 49 5 1 3689 3737 159336611 159336658 8.680000e-04 56.5
29 TraesCS5B01G093600 chr3A 78.870 478 71 13 4 454 711257094 711256620 4.700000e-76 296.0
30 TraesCS5B01G093600 chr3A 78.008 482 79 12 1 459 147523732 147523255 1.700000e-70 278.0
31 TraesCS5B01G093600 chr1D 78.763 485 69 17 1 455 444845062 444844582 1.690000e-75 294.0
32 TraesCS5B01G093600 chr6A 78.661 478 68 20 1 447 29792921 29792447 2.830000e-73 287.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G093600 chr5B 122838347 122844544 6197 False 11446 11446 100.000 1 6198 1 chr5B.!!$F1 6197
1 TraesCS5B01G093600 chr5D 109814379 109820209 5830 True 8804 8804 94.078 1 5786 1 chr5D.!!$R2 5785
2 TraesCS5B01G093600 chr5A 117493748 117498946 5198 False 7640 7640 93.452 537 5663 1 chr5A.!!$F2 5126

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 843 0.102300 GCGCTCCCTTCTCTCTCTTC 59.898 60.000 0.00 0.00 0.00 2.87 F
2290 2366 0.035458 CCTCCCGGCAATCCATCTAC 59.965 60.000 0.00 0.00 0.00 2.59 F
2368 2444 2.944349 GTTTGGTAACCTCGTGGAACAA 59.056 45.455 11.17 0.75 44.16 2.83 F
3772 3862 0.839946 AGAGTCCAGGCACAAAGTGT 59.160 50.000 0.00 0.00 35.75 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2368 2444 0.598065 GCCACGCAAAATTCCAGAGT 59.402 50.000 0.00 0.00 0.00 3.24 R
3750 3840 1.625818 ACTTTGTGCCTGGACTCTAGG 59.374 52.381 4.02 4.02 38.39 3.02 R
3801 3891 1.740297 TGTGTTGCTACGTTTGGTGT 58.260 45.000 0.00 0.00 0.00 4.16 R
5197 5312 0.673022 CACTGCTCTGCTCCCACTTC 60.673 60.000 0.00 0.00 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.884075 TAGCGGTGGCGATGTCACTT 61.884 55.000 0.00 0.00 46.35 3.16
48 49 9.090103 CACTTAGTAGGAATAATATCTCCCACA 57.910 37.037 0.00 0.00 31.50 4.17
62 63 1.418908 CCCACATTCTATCCCCGCCT 61.419 60.000 0.00 0.00 0.00 5.52
88 89 0.589223 GAGTCTAGCATCGTCGGAGG 59.411 60.000 0.00 0.00 0.00 4.30
89 90 0.180642 AGTCTAGCATCGTCGGAGGA 59.819 55.000 2.53 2.53 0.00 3.71
119 120 2.764572 GGTTTATCTCCTTCGGGTCTCA 59.235 50.000 0.00 0.00 36.28 3.27
121 122 2.820728 TATCTCCTTCGGGTCTCACA 57.179 50.000 0.00 0.00 36.28 3.58
126 127 2.234908 CTCCTTCGGGTCTCACAGATTT 59.765 50.000 0.00 0.00 36.28 2.17
129 130 1.639722 TCGGGTCTCACAGATTTGGA 58.360 50.000 0.00 0.00 0.00 3.53
143 144 0.106918 TTTGGACGGTGCTGGTCTTT 60.107 50.000 0.31 0.00 34.82 2.52
151 152 2.019984 GGTGCTGGTCTTTGATGGATC 58.980 52.381 0.00 0.00 0.00 3.36
161 162 5.067023 GGTCTTTGATGGATCTGTTTGGATC 59.933 44.000 0.00 0.00 40.78 3.36
171 172 0.672401 TGTTTGGATCCGGTCTTCGC 60.672 55.000 7.39 0.00 37.59 4.70
179 180 2.506438 CGGTCTTCGCCCGTCTTC 60.506 66.667 0.00 0.00 40.59 2.87
193 194 3.060070 CCCGTCTTCGTTTGAGTGTTTAC 60.060 47.826 0.00 0.00 35.01 2.01
207 208 7.672983 TGAGTGTTTACAGATTTGATCCTTC 57.327 36.000 0.00 0.00 0.00 3.46
209 210 8.593679 TGAGTGTTTACAGATTTGATCCTTCTA 58.406 33.333 0.00 0.00 0.00 2.10
210 211 9.606631 GAGTGTTTACAGATTTGATCCTTCTAT 57.393 33.333 0.00 0.00 0.00 1.98
219 220 9.319143 CAGATTTGATCCTTCTATTTTACGACT 57.681 33.333 0.00 0.00 0.00 4.18
234 235 6.627690 TTTACGACTTTATTCTTCAGCGAG 57.372 37.500 0.00 0.00 0.00 5.03
257 258 3.730761 CTGCTCTGGTGCGTTGGC 61.731 66.667 0.00 0.00 40.52 4.52
307 316 1.152860 TTTTTGGCTCCAGTGGCGA 60.153 52.632 3.51 0.00 35.06 5.54
345 355 2.742372 GCCTTCGGCTCGCTTCAA 60.742 61.111 0.00 0.00 46.69 2.69
351 361 0.108377 TCGGCTCGCTTCAATGCTTA 60.108 50.000 0.00 0.00 0.00 3.09
364 374 4.784329 TCAATGCTTATAGTCGTCGCTAG 58.216 43.478 0.00 0.00 0.00 3.42
368 378 2.547211 GCTTATAGTCGTCGCTAGGTGA 59.453 50.000 0.00 0.00 0.00 4.02
416 426 8.094548 TGTATTACATCTGTTCTTTGTACTGCT 58.905 33.333 0.00 0.00 0.00 4.24
434 445 9.136323 TGTACTGCTATGATTGAAGAGAATAGA 57.864 33.333 0.00 0.00 0.00 1.98
469 480 7.897864 TCTTGTAAAAGAAAAGTTTCCCACAA 58.102 30.769 0.00 5.46 37.92 3.33
516 527 7.884816 TGTGGAATAAACTCTTTTACTCTCG 57.115 36.000 0.00 0.00 29.77 4.04
517 528 7.663827 TGTGGAATAAACTCTTTTACTCTCGA 58.336 34.615 0.00 0.00 29.77 4.04
518 529 8.145767 TGTGGAATAAACTCTTTTACTCTCGAA 58.854 33.333 0.00 0.00 29.77 3.71
559 570 4.954092 AAAAGTCCTCAAATCGATGCTC 57.046 40.909 0.00 0.00 0.00 4.26
586 597 0.593128 AGTCACATTTCAAGCACCGC 59.407 50.000 0.00 0.00 0.00 5.68
589 600 2.161410 GTCACATTTCAAGCACCGCATA 59.839 45.455 0.00 0.00 0.00 3.14
706 718 1.886542 GGCAACCGAAAAATCCTCACT 59.113 47.619 0.00 0.00 0.00 3.41
730 742 2.896168 TCGATTAAAAATCGGACGGCT 58.104 42.857 18.76 0.00 41.45 5.52
731 743 2.605818 TCGATTAAAAATCGGACGGCTG 59.394 45.455 18.76 0.00 41.45 4.85
776 796 3.056891 CCATATCCTCTTTCCGCTCTCTC 60.057 52.174 0.00 0.00 0.00 3.20
812 832 2.982744 GCAACTTGGCGCTCCCTTC 61.983 63.158 7.64 0.00 0.00 3.46
821 843 0.102300 GCGCTCCCTTCTCTCTCTTC 59.898 60.000 0.00 0.00 0.00 2.87
822 844 1.762708 CGCTCCCTTCTCTCTCTTCT 58.237 55.000 0.00 0.00 0.00 2.85
823 845 2.099405 CGCTCCCTTCTCTCTCTTCTT 58.901 52.381 0.00 0.00 0.00 2.52
838 860 2.657459 TCTTCTTCTTCTCCCTCCTCCT 59.343 50.000 0.00 0.00 0.00 3.69
839 861 2.838637 TCTTCTTCTCCCTCCTCCTC 57.161 55.000 0.00 0.00 0.00 3.71
840 862 1.289530 TCTTCTTCTCCCTCCTCCTCC 59.710 57.143 0.00 0.00 0.00 4.30
888 910 3.709653 CAGGATAAGGTAGCCAGTGGTAA 59.290 47.826 11.74 0.00 36.48 2.85
1151 1176 1.082496 GTGCTGTCTGCTTTGCGTC 60.082 57.895 3.20 0.00 43.37 5.19
1236 1303 1.212195 AGTTTTAGCCGGGGAAGGATC 59.788 52.381 2.18 0.00 0.00 3.36
1240 1307 1.113517 TAGCCGGGGAAGGATCGAAG 61.114 60.000 2.18 0.00 0.00 3.79
1312 1379 7.733773 TGGATGGTCTAGAGATAAGTTCAAA 57.266 36.000 0.00 0.00 0.00 2.69
1320 1387 5.707066 AGAGATAAGTTCAAATCAGGGCT 57.293 39.130 0.00 0.00 0.00 5.19
1362 1429 6.664384 GTAGCTTAGCTTGGTATAGGACCTAT 59.336 42.308 13.44 18.13 43.82 2.57
1417 1484 7.332430 TGTGGGTCTATTGTTTATTAAGTGACG 59.668 37.037 0.00 0.00 0.00 4.35
1420 1487 7.763071 GGGTCTATTGTTTATTAAGTGACGACT 59.237 37.037 0.00 0.00 0.00 4.18
1493 1560 3.186409 TCAGTATGTTTTCGCTTGAGCAC 59.814 43.478 3.65 0.00 38.09 4.40
1515 1582 2.871133 CGTGCTGATTCCTACGTTGTA 58.129 47.619 0.00 0.00 0.00 2.41
1516 1583 2.852413 CGTGCTGATTCCTACGTTGTAG 59.148 50.000 0.00 0.00 0.00 2.74
1561 1628 7.355332 TGAATTAGCAAAACGTTAGTAGGTC 57.645 36.000 0.00 0.00 0.00 3.85
1576 1643 4.212716 AGTAGGTCGATGTATGCCAAGTA 58.787 43.478 0.00 0.00 0.00 2.24
1577 1644 3.735237 AGGTCGATGTATGCCAAGTAG 57.265 47.619 0.00 0.00 0.00 2.57
1578 1645 3.031736 AGGTCGATGTATGCCAAGTAGT 58.968 45.455 0.00 0.00 0.00 2.73
1579 1646 3.123804 GGTCGATGTATGCCAAGTAGTG 58.876 50.000 0.00 0.00 0.00 2.74
1580 1647 3.181479 GGTCGATGTATGCCAAGTAGTGA 60.181 47.826 0.00 0.00 0.00 3.41
1626 1694 8.909708 TGAGTTACAATGTTTCAACTTTCAAG 57.090 30.769 2.07 0.00 31.57 3.02
1695 1765 5.633830 ACATAGCAAATGTTGAGGTTGAG 57.366 39.130 0.00 0.00 0.00 3.02
1812 1882 8.616799 ATGTTCTAGATTCTAGTCCTTTTCCT 57.383 34.615 18.06 0.00 0.00 3.36
1861 1931 0.321298 TTTTGAGGAGCTGCCGGTAC 60.321 55.000 1.90 0.00 43.43 3.34
2009 2079 4.724798 ACCCTGCTGGACTATATGGTAAAA 59.275 41.667 11.88 0.00 38.00 1.52
2010 2080 5.063880 CCCTGCTGGACTATATGGTAAAAC 58.936 45.833 11.88 0.00 35.39 2.43
2072 2143 7.011109 CACTGTTTACACTTTACACACTAAGCT 59.989 37.037 0.00 0.00 0.00 3.74
2085 2156 9.529325 TTACACACTAAGCTATGCAGTTAATAG 57.471 33.333 0.00 0.00 0.00 1.73
2192 2264 8.887036 ATTAATGTTTTCAGTTTTCAACTCCC 57.113 30.769 0.00 0.00 40.46 4.30
2233 2308 7.942894 GCATACCTACCCCTAGTGATTTTTAAT 59.057 37.037 0.00 0.00 0.00 1.40
2234 2309 9.503399 CATACCTACCCCTAGTGATTTTTAATC 57.497 37.037 0.00 0.00 0.00 1.75
2236 2311 8.171337 ACCTACCCCTAGTGATTTTTAATCTT 57.829 34.615 0.00 0.00 0.00 2.40
2290 2366 0.035458 CCTCCCGGCAATCCATCTAC 59.965 60.000 0.00 0.00 0.00 2.59
2320 2396 8.847196 GGAACTTAATACCCCTTTAACATCATC 58.153 37.037 0.00 0.00 0.00 2.92
2337 2413 5.481122 ACATCATCTATGCAGCTCTCTATGT 59.519 40.000 0.00 0.00 39.39 2.29
2359 2435 5.993441 TGTTAGCTACTTGTTTGGTAACCTC 59.007 40.000 17.07 3.87 40.84 3.85
2368 2444 2.944349 GTTTGGTAACCTCGTGGAACAA 59.056 45.455 11.17 0.75 44.16 2.83
2383 2459 3.243367 TGGAACAACTCTGGAATTTTGCG 60.243 43.478 0.00 0.00 31.92 4.85
2643 2719 9.852091 CTTGCTTTATTTTCTCTGCTTTCTTAT 57.148 29.630 0.00 0.00 0.00 1.73
2956 3032 6.479660 TCCACATTTTGTTTTGCAGATTCTTC 59.520 34.615 0.00 0.00 0.00 2.87
2997 3076 4.640201 TGCATTCCACTCCTAAAATAGCAC 59.360 41.667 0.00 0.00 0.00 4.40
2998 3077 4.884164 GCATTCCACTCCTAAAATAGCACT 59.116 41.667 0.00 0.00 0.00 4.40
3131 3211 5.250235 TCTCTATGAAGTTAGCAGGAACG 57.750 43.478 0.00 0.00 34.36 3.95
3203 3283 6.634805 TGATCTTCTTTGTGAGGTGAGATAC 58.365 40.000 0.00 0.00 0.00 2.24
3215 3295 5.670818 TGAGGTGAGATACTCCTAAGTCCTA 59.329 44.000 0.00 0.00 41.80 2.94
3302 3382 8.956426 TGTTTGGTGGATCTTGTTATCTTATTC 58.044 33.333 0.00 0.00 0.00 1.75
3331 3411 3.762288 ACTTCAATCACAGCATGCAATCT 59.238 39.130 21.98 0.00 42.53 2.40
3450 3530 5.235516 ACGACATAGTAACCTGTTTGAAGG 58.764 41.667 0.00 0.00 43.57 3.46
3772 3862 0.839946 AGAGTCCAGGCACAAAGTGT 59.160 50.000 0.00 0.00 35.75 3.55
3801 3891 7.380423 TTCATCCATTTAAAGGAAAACCCAA 57.620 32.000 0.46 0.00 38.93 4.12
3847 3937 7.994911 TCATAATGCTTAATCTCACAGTGGATT 59.005 33.333 16.73 16.73 36.36 3.01
3854 3944 2.054021 TCTCACAGTGGATTGTCCCAA 58.946 47.619 0.00 0.00 38.06 4.12
3866 3956 5.044179 TGGATTGTCCCAATGAGGAACTTAT 60.044 40.000 0.00 0.00 41.22 1.73
3906 3996 6.699575 AAGTTCAGTTATTATGTGGATGGC 57.300 37.500 0.00 0.00 0.00 4.40
3915 4005 8.172741 AGTTATTATGTGGATGGCCTGATATTT 58.827 33.333 3.32 0.00 34.31 1.40
4033 4123 5.562623 CGTGTTTCTAAATTTCAACGTAGCC 59.437 40.000 0.00 0.00 0.00 3.93
4081 4171 3.847671 TTGTTGATGCATCGGGGTATA 57.152 42.857 21.34 0.00 0.00 1.47
4180 4270 2.128035 CCATCTATCGTCGGTGCTTTC 58.872 52.381 0.00 0.00 0.00 2.62
4272 4362 9.225682 TGGAATTCTAAAGGTTGGATCTATACT 57.774 33.333 5.23 0.00 0.00 2.12
4278 4368 9.901172 TCTAAAGGTTGGATCTATACTTTTTCC 57.099 33.333 11.77 0.00 31.43 3.13
4338 4428 4.751767 ACCTCAATTTTCTTTGGTGCAA 57.248 36.364 0.00 0.00 0.00 4.08
4403 4493 2.827800 TCAAGCCTCACTCTTGTCAG 57.172 50.000 3.14 0.00 41.13 3.51
4508 4598 7.744678 AGACCTTAGCTACAAATTACCCTTA 57.255 36.000 0.00 0.00 0.00 2.69
4526 4616 9.947433 TTACCCTTAGATTAAGAATTTGACGAA 57.053 29.630 0.00 0.00 38.02 3.85
4710 4800 1.061711 GCAGAGTTAGTCATGCTTGCG 59.938 52.381 0.00 0.00 35.78 4.85
4767 4857 1.142748 CCTGGCGATCCTGTCTGTC 59.857 63.158 0.00 0.00 0.00 3.51
4770 4860 0.611896 TGGCGATCCTGTCTGTCTCA 60.612 55.000 0.00 0.00 0.00 3.27
4773 4863 1.269517 GCGATCCTGTCTGTCTCATCC 60.270 57.143 0.00 0.00 0.00 3.51
4776 4866 1.464734 TCCTGTCTGTCTCATCCGTC 58.535 55.000 0.00 0.00 0.00 4.79
4809 4899 1.156736 GGATGTTCTGTCGGTGGTTG 58.843 55.000 0.00 0.00 0.00 3.77
4810 4900 1.270625 GGATGTTCTGTCGGTGGTTGA 60.271 52.381 0.00 0.00 0.00 3.18
4839 4929 8.484921 ATCCAACAGATGAACAGAGGGAACTC 62.485 46.154 0.00 0.00 45.85 3.01
4906 4996 7.458397 TCTAATTCGTTCCATTAGCCCATTAT 58.542 34.615 0.00 0.00 35.13 1.28
4928 5018 8.862325 TTATTTCATGAAGAACATACCAGTGT 57.138 30.769 8.41 0.00 37.46 3.55
4929 5019 7.765695 ATTTCATGAAGAACATACCAGTGTT 57.234 32.000 8.41 0.00 44.53 3.32
4940 5030 6.721571 ACATACCAGTGTTCAAAATAGTCG 57.278 37.500 0.00 0.00 0.00 4.18
4947 5037 5.696724 CAGTGTTCAAAATAGTCGGACTTCT 59.303 40.000 16.95 1.43 0.00 2.85
4948 5038 5.696724 AGTGTTCAAAATAGTCGGACTTCTG 59.303 40.000 16.95 8.70 0.00 3.02
4951 5041 7.331193 GTGTTCAAAATAGTCGGACTTCTGTAT 59.669 37.037 16.95 0.00 0.00 2.29
4979 5069 3.882131 ACTGCCAAGTGTTGTGTCT 57.118 47.368 0.00 0.00 34.48 3.41
4983 5073 2.423185 CTGCCAAGTGTTGTGTCTTGAA 59.577 45.455 6.50 0.00 42.22 2.69
4984 5074 2.822561 TGCCAAGTGTTGTGTCTTGAAA 59.177 40.909 6.50 0.00 42.22 2.69
4990 5080 3.063997 AGTGTTGTGTCTTGAAAGCTTCG 59.936 43.478 0.00 0.00 0.00 3.79
4993 5083 4.270084 TGTTGTGTCTTGAAAGCTTCGTAG 59.730 41.667 0.00 0.00 0.00 3.51
5010 5100 9.480053 AGCTTCGTAGTTTATACAACTGTTTTA 57.520 29.630 9.30 0.00 0.00 1.52
5030 5120 9.398538 TGTTTTAACAGTAGGACATGTAAAACT 57.601 29.630 20.15 12.43 36.00 2.66
5031 5121 9.659830 GTTTTAACAGTAGGACATGTAAAACTG 57.340 33.333 22.71 22.71 40.08 3.16
5037 5127 6.369065 CAGTAGGACATGTAAAACTGGAACTC 59.631 42.308 19.14 0.00 32.60 3.01
5054 5144 5.055812 GGAACTCTAAGCAGGATCATCAAG 58.944 45.833 0.00 0.00 0.00 3.02
5081 5196 7.909267 TGATAAGACATGAACATCAAATCGAC 58.091 34.615 0.00 0.00 0.00 4.20
5089 5204 5.712004 TGAACATCAAATCGACATGCAAAT 58.288 33.333 0.00 0.00 0.00 2.32
5143 5258 2.054021 TCAACATCCCAACAGACCTGA 58.946 47.619 3.76 0.00 0.00 3.86
5189 5304 3.661944 CAGAGCATCGCCATCTTATCTT 58.338 45.455 0.00 0.00 42.67 2.40
5197 5312 4.814147 TCGCCATCTTATCTTGCAGATAG 58.186 43.478 6.15 0.00 38.34 2.08
5201 5316 6.229733 GCCATCTTATCTTGCAGATAGAAGT 58.770 40.000 6.15 0.00 38.34 3.01
5368 5483 1.267932 GCGCTGCAATGATCTGAAGAC 60.268 52.381 0.00 0.00 0.00 3.01
5449 5566 3.058914 CAGAGACACCCATTTGTTCGTTC 60.059 47.826 0.00 0.00 0.00 3.95
5577 5694 2.360165 AGGTAGAACGAACGTGACTGTT 59.640 45.455 0.00 0.00 34.02 3.16
5672 5789 1.722011 TTTCTGCTTCGGTCCGATTC 58.278 50.000 16.23 10.39 35.23 2.52
5706 5823 2.122768 AGGACAGAAGGTGATGGATCC 58.877 52.381 4.20 4.20 0.00 3.36
5770 5888 7.667575 ATTACTGTACTGTCTGATGATCCTT 57.332 36.000 8.85 0.00 0.00 3.36
5783 5901 9.250624 GTCTGATGATCCTTTGTGTATTAGTAC 57.749 37.037 0.00 0.00 0.00 2.73
5789 5907 8.192774 TGATCCTTTGTGTATTAGTACTTACCG 58.807 37.037 0.00 0.00 0.00 4.02
5790 5908 7.701539 TCCTTTGTGTATTAGTACTTACCGA 57.298 36.000 0.00 0.00 0.00 4.69
5791 5909 8.121305 TCCTTTGTGTATTAGTACTTACCGAA 57.879 34.615 0.00 0.00 0.00 4.30
5792 5910 8.584157 TCCTTTGTGTATTAGTACTTACCGAAA 58.416 33.333 0.00 0.34 0.00 3.46
5793 5911 9.206870 CCTTTGTGTATTAGTACTTACCGAAAA 57.793 33.333 0.00 0.00 0.00 2.29
5796 5914 8.761575 TGTGTATTAGTACTTACCGAAAAAGG 57.238 34.615 0.00 0.00 37.30 3.11
5797 5915 7.818930 TGTGTATTAGTACTTACCGAAAAAGGG 59.181 37.037 0.00 0.00 35.02 3.95
5798 5916 7.819415 GTGTATTAGTACTTACCGAAAAAGGGT 59.181 37.037 0.00 0.00 41.62 4.34
5799 5917 8.374743 TGTATTAGTACTTACCGAAAAAGGGTT 58.625 33.333 0.00 0.00 38.99 4.11
5800 5918 9.219603 GTATTAGTACTTACCGAAAAAGGGTTT 57.780 33.333 0.00 0.00 38.99 3.27
5801 5919 7.728847 TTAGTACTTACCGAAAAAGGGTTTC 57.271 36.000 0.00 0.00 38.99 2.78
5802 5920 5.065914 AGTACTTACCGAAAAAGGGTTTCC 58.934 41.667 0.00 0.00 38.99 3.13
5803 5921 3.225104 ACTTACCGAAAAAGGGTTTCCC 58.775 45.455 0.00 0.00 45.90 3.97
5814 5932 2.440517 GGGTTTCCCCCGCTTTATAA 57.559 50.000 0.00 0.00 45.80 0.98
5815 5933 2.737544 GGGTTTCCCCCGCTTTATAAA 58.262 47.619 0.00 0.00 45.80 1.40
5816 5934 3.302161 GGGTTTCCCCCGCTTTATAAAT 58.698 45.455 0.00 0.00 45.80 1.40
5817 5935 4.472496 GGGTTTCCCCCGCTTTATAAATA 58.528 43.478 0.00 0.00 45.80 1.40
5818 5936 4.894705 GGGTTTCCCCCGCTTTATAAATAA 59.105 41.667 0.00 0.00 45.80 1.40
5819 5937 5.363292 GGGTTTCCCCCGCTTTATAAATAAA 59.637 40.000 0.00 0.00 45.80 1.40
5820 5938 6.461927 GGGTTTCCCCCGCTTTATAAATAAAG 60.462 42.308 15.20 15.20 45.80 1.85
5837 5955 5.897377 ATAAAGCACCAACACTTACATCC 57.103 39.130 0.00 0.00 0.00 3.51
5838 5956 2.949177 AGCACCAACACTTACATCCA 57.051 45.000 0.00 0.00 0.00 3.41
5839 5957 3.222173 AGCACCAACACTTACATCCAA 57.778 42.857 0.00 0.00 0.00 3.53
5840 5958 3.149196 AGCACCAACACTTACATCCAAG 58.851 45.455 0.00 0.00 0.00 3.61
5841 5959 2.884639 GCACCAACACTTACATCCAAGT 59.115 45.455 0.00 0.00 39.34 3.16
5842 5960 4.069304 GCACCAACACTTACATCCAAGTA 58.931 43.478 0.00 0.00 36.61 2.24
5843 5961 4.517453 GCACCAACACTTACATCCAAGTAA 59.483 41.667 0.00 0.00 36.61 2.24
5844 5962 5.562113 GCACCAACACTTACATCCAAGTAAC 60.562 44.000 0.00 0.00 36.61 2.50
5845 5963 5.048991 CACCAACACTTACATCCAAGTAACC 60.049 44.000 0.00 0.00 36.61 2.85
5846 5964 4.153475 CCAACACTTACATCCAAGTAACCG 59.847 45.833 0.00 0.00 36.61 4.44
5847 5965 4.877378 ACACTTACATCCAAGTAACCGA 57.123 40.909 0.00 0.00 36.61 4.69
5848 5966 5.416271 ACACTTACATCCAAGTAACCGAT 57.584 39.130 0.00 0.00 36.61 4.18
5849 5967 6.534475 ACACTTACATCCAAGTAACCGATA 57.466 37.500 0.00 0.00 36.61 2.92
5850 5968 6.335777 ACACTTACATCCAAGTAACCGATAC 58.664 40.000 0.00 0.00 36.61 2.24
5851 5969 6.071221 ACACTTACATCCAAGTAACCGATACA 60.071 38.462 0.00 0.00 36.61 2.29
5852 5970 6.814644 CACTTACATCCAAGTAACCGATACAA 59.185 38.462 0.00 0.00 36.61 2.41
5853 5971 7.332430 CACTTACATCCAAGTAACCGATACAAA 59.668 37.037 0.00 0.00 36.61 2.83
5854 5972 7.332678 ACTTACATCCAAGTAACCGATACAAAC 59.667 37.037 0.00 0.00 36.99 2.93
5855 5973 4.628333 ACATCCAAGTAACCGATACAAACG 59.372 41.667 0.00 0.00 36.94 3.60
5856 5974 2.995258 TCCAAGTAACCGATACAAACGC 59.005 45.455 0.00 0.00 36.94 4.84
5857 5975 2.737783 CCAAGTAACCGATACAAACGCA 59.262 45.455 0.00 0.00 36.94 5.24
5858 5976 3.423907 CCAAGTAACCGATACAAACGCAC 60.424 47.826 0.00 0.00 36.94 5.34
5859 5977 1.987770 AGTAACCGATACAAACGCACG 59.012 47.619 0.00 0.00 36.94 5.34
5860 5978 0.714994 TAACCGATACAAACGCACGC 59.285 50.000 0.00 0.00 0.00 5.34
5861 5979 1.903783 AACCGATACAAACGCACGCC 61.904 55.000 0.00 0.00 0.00 5.68
5862 5980 2.384309 CCGATACAAACGCACGCCA 61.384 57.895 0.00 0.00 0.00 5.69
5863 5981 1.225637 CGATACAAACGCACGCCAC 60.226 57.895 0.00 0.00 0.00 5.01
5864 5982 1.863491 GATACAAACGCACGCCACA 59.137 52.632 0.00 0.00 0.00 4.17
5865 5983 0.452122 GATACAAACGCACGCCACAC 60.452 55.000 0.00 0.00 0.00 3.82
5866 5984 1.160946 ATACAAACGCACGCCACACA 61.161 50.000 0.00 0.00 0.00 3.72
5867 5985 1.366854 TACAAACGCACGCCACACAA 61.367 50.000 0.00 0.00 0.00 3.33
5868 5986 2.101380 AAACGCACGCCACACAAC 59.899 55.556 0.00 0.00 0.00 3.32
5869 5987 3.404141 AAACGCACGCCACACAACC 62.404 57.895 0.00 0.00 0.00 3.77
5872 5990 3.522731 GCACGCCACACAACCCAA 61.523 61.111 0.00 0.00 0.00 4.12
5873 5991 2.721231 CACGCCACACAACCCAAG 59.279 61.111 0.00 0.00 0.00 3.61
5874 5992 2.518349 ACGCCACACAACCCAAGG 60.518 61.111 0.00 0.00 0.00 3.61
5875 5993 3.977244 CGCCACACAACCCAAGGC 61.977 66.667 0.00 0.00 41.86 4.35
5876 5994 2.837291 GCCACACAACCCAAGGCA 60.837 61.111 0.00 0.00 44.59 4.75
5877 5995 2.430610 GCCACACAACCCAAGGCAA 61.431 57.895 0.00 0.00 44.59 4.52
5878 5996 1.741525 CCACACAACCCAAGGCAAG 59.258 57.895 0.00 0.00 0.00 4.01
5879 5997 0.754957 CCACACAACCCAAGGCAAGA 60.755 55.000 0.00 0.00 0.00 3.02
5880 5998 1.110442 CACACAACCCAAGGCAAGAA 58.890 50.000 0.00 0.00 0.00 2.52
5881 5999 1.480137 CACACAACCCAAGGCAAGAAA 59.520 47.619 0.00 0.00 0.00 2.52
5882 6000 1.480545 ACACAACCCAAGGCAAGAAAC 59.519 47.619 0.00 0.00 0.00 2.78
5883 6001 1.480137 CACAACCCAAGGCAAGAAACA 59.520 47.619 0.00 0.00 0.00 2.83
5884 6002 2.093764 CACAACCCAAGGCAAGAAACAA 60.094 45.455 0.00 0.00 0.00 2.83
5885 6003 2.569404 ACAACCCAAGGCAAGAAACAAA 59.431 40.909 0.00 0.00 0.00 2.83
5886 6004 3.008485 ACAACCCAAGGCAAGAAACAAAA 59.992 39.130 0.00 0.00 0.00 2.44
5887 6005 3.990959 ACCCAAGGCAAGAAACAAAAA 57.009 38.095 0.00 0.00 0.00 1.94
5888 6006 4.502105 ACCCAAGGCAAGAAACAAAAAT 57.498 36.364 0.00 0.00 0.00 1.82
5889 6007 4.198530 ACCCAAGGCAAGAAACAAAAATG 58.801 39.130 0.00 0.00 0.00 2.32
5890 6008 3.003585 CCCAAGGCAAGAAACAAAAATGC 59.996 43.478 0.00 0.00 36.31 3.56
5892 6010 2.947754 GGCAAGAAACAAAAATGCCG 57.052 45.000 0.00 0.00 46.11 5.69
5893 6011 1.530720 GGCAAGAAACAAAAATGCCGG 59.469 47.619 0.00 0.00 46.11 6.13
5894 6012 1.530720 GCAAGAAACAAAAATGCCGGG 59.469 47.619 2.18 0.00 0.00 5.73
5895 6013 1.530720 CAAGAAACAAAAATGCCGGGC 59.469 47.619 13.32 13.32 0.00 6.13
5896 6014 0.755686 AGAAACAAAAATGCCGGGCA 59.244 45.000 26.11 26.11 44.86 5.36
5897 6015 0.865111 GAAACAAAAATGCCGGGCAC 59.135 50.000 26.48 4.06 43.04 5.01
5909 6027 2.203153 GGGCACCGACACACAACT 60.203 61.111 0.00 0.00 40.86 3.16
5910 6028 1.822186 GGGCACCGACACACAACTT 60.822 57.895 0.00 0.00 40.86 2.66
5911 6029 1.647084 GGCACCGACACACAACTTC 59.353 57.895 0.00 0.00 0.00 3.01
5912 6030 1.092921 GGCACCGACACACAACTTCA 61.093 55.000 0.00 0.00 0.00 3.02
5913 6031 0.730265 GCACCGACACACAACTTCAA 59.270 50.000 0.00 0.00 0.00 2.69
5914 6032 1.531058 GCACCGACACACAACTTCAAC 60.531 52.381 0.00 0.00 0.00 3.18
5915 6033 1.003851 ACCGACACACAACTTCAACG 58.996 50.000 0.00 0.00 0.00 4.10
5916 6034 1.282817 CCGACACACAACTTCAACGA 58.717 50.000 0.00 0.00 0.00 3.85
5917 6035 1.005347 CCGACACACAACTTCAACGAC 60.005 52.381 0.00 0.00 0.00 4.34
5918 6036 1.924524 CGACACACAACTTCAACGACT 59.075 47.619 0.00 0.00 0.00 4.18
5919 6037 3.110358 CGACACACAACTTCAACGACTA 58.890 45.455 0.00 0.00 0.00 2.59
5920 6038 3.061403 CGACACACAACTTCAACGACTAC 60.061 47.826 0.00 0.00 0.00 2.73
5921 6039 3.192466 ACACACAACTTCAACGACTACC 58.808 45.455 0.00 0.00 0.00 3.18
5922 6040 3.191669 CACACAACTTCAACGACTACCA 58.808 45.455 0.00 0.00 0.00 3.25
5923 6041 3.000925 CACACAACTTCAACGACTACCAC 59.999 47.826 0.00 0.00 0.00 4.16
5924 6042 3.191669 CACAACTTCAACGACTACCACA 58.808 45.455 0.00 0.00 0.00 4.17
5925 6043 3.619483 CACAACTTCAACGACTACCACAA 59.381 43.478 0.00 0.00 0.00 3.33
5926 6044 3.869246 ACAACTTCAACGACTACCACAAG 59.131 43.478 0.00 0.00 0.00 3.16
5927 6045 4.116961 CAACTTCAACGACTACCACAAGA 58.883 43.478 0.00 0.00 0.00 3.02
5928 6046 4.395959 ACTTCAACGACTACCACAAGAA 57.604 40.909 0.00 0.00 0.00 2.52
5929 6047 4.369182 ACTTCAACGACTACCACAAGAAG 58.631 43.478 0.00 0.00 37.74 2.85
5930 6048 4.098960 ACTTCAACGACTACCACAAGAAGA 59.901 41.667 0.00 0.00 36.15 2.87
5931 6049 4.238761 TCAACGACTACCACAAGAAGAG 57.761 45.455 0.00 0.00 0.00 2.85
5932 6050 3.887110 TCAACGACTACCACAAGAAGAGA 59.113 43.478 0.00 0.00 0.00 3.10
5933 6051 4.023107 TCAACGACTACCACAAGAAGAGAG 60.023 45.833 0.00 0.00 0.00 3.20
5934 6052 3.752665 ACGACTACCACAAGAAGAGAGA 58.247 45.455 0.00 0.00 0.00 3.10
5935 6053 4.337145 ACGACTACCACAAGAAGAGAGAT 58.663 43.478 0.00 0.00 0.00 2.75
5936 6054 4.396790 ACGACTACCACAAGAAGAGAGATC 59.603 45.833 0.00 0.00 0.00 2.75
5937 6055 4.495019 CGACTACCACAAGAAGAGAGATCG 60.495 50.000 0.00 0.00 0.00 3.69
5938 6056 4.337145 ACTACCACAAGAAGAGAGATCGT 58.663 43.478 0.00 0.00 0.00 3.73
5939 6057 3.859411 ACCACAAGAAGAGAGATCGTC 57.141 47.619 0.00 0.00 0.00 4.20
5940 6058 2.494073 ACCACAAGAAGAGAGATCGTCC 59.506 50.000 0.00 0.00 0.00 4.79
5941 6059 2.478709 CCACAAGAAGAGAGATCGTCCG 60.479 54.545 0.00 0.00 0.00 4.79
5942 6060 1.746220 ACAAGAAGAGAGATCGTCCGG 59.254 52.381 0.00 0.00 0.00 5.14
5943 6061 1.066303 CAAGAAGAGAGATCGTCCGGG 59.934 57.143 0.00 0.00 0.00 5.73
5944 6062 0.547075 AGAAGAGAGATCGTCCGGGA 59.453 55.000 0.00 0.00 0.00 5.14
5945 6063 1.064611 AGAAGAGAGATCGTCCGGGAA 60.065 52.381 0.00 0.00 0.00 3.97
5946 6064 1.335496 GAAGAGAGATCGTCCGGGAAG 59.665 57.143 0.00 0.00 0.00 3.46
5947 6065 0.547075 AGAGAGATCGTCCGGGAAGA 59.453 55.000 15.01 15.01 0.00 2.87
5948 6066 1.064611 AGAGAGATCGTCCGGGAAGAA 60.065 52.381 16.52 1.07 0.00 2.52
5949 6067 1.335496 GAGAGATCGTCCGGGAAGAAG 59.665 57.143 16.52 0.55 0.00 2.85
5950 6068 1.104630 GAGATCGTCCGGGAAGAAGT 58.895 55.000 16.52 6.92 0.00 3.01
5951 6069 0.818296 AGATCGTCCGGGAAGAAGTG 59.182 55.000 16.52 0.00 0.00 3.16
5952 6070 0.806492 GATCGTCCGGGAAGAAGTGC 60.806 60.000 16.52 3.73 0.00 4.40
5953 6071 1.541310 ATCGTCCGGGAAGAAGTGCA 61.541 55.000 16.52 0.00 0.00 4.57
5954 6072 1.301401 CGTCCGGGAAGAAGTGCAA 60.301 57.895 3.68 0.00 0.00 4.08
5955 6073 1.566018 CGTCCGGGAAGAAGTGCAAC 61.566 60.000 3.68 0.00 0.00 4.17
5956 6074 1.301401 TCCGGGAAGAAGTGCAACG 60.301 57.895 0.00 0.00 45.86 4.10
5957 6075 2.325082 CCGGGAAGAAGTGCAACGG 61.325 63.158 0.00 0.00 45.86 4.44
5958 6076 1.301401 CGGGAAGAAGTGCAACGGA 60.301 57.895 0.00 0.00 45.86 4.69
5959 6077 1.566018 CGGGAAGAAGTGCAACGGAC 61.566 60.000 0.00 0.00 45.86 4.79
5960 6078 1.235281 GGGAAGAAGTGCAACGGACC 61.235 60.000 0.00 0.00 45.86 4.46
5961 6079 0.534203 GGAAGAAGTGCAACGGACCA 60.534 55.000 0.00 0.00 45.86 4.02
5962 6080 0.586802 GAAGAAGTGCAACGGACCAC 59.413 55.000 0.00 0.00 45.86 4.16
5981 6099 3.315949 CCGGACCGAGGGTTCCAA 61.316 66.667 17.49 0.00 35.25 3.53
5982 6100 2.264794 CGGACCGAGGGTTCCAAG 59.735 66.667 8.64 0.00 35.25 3.61
5983 6101 2.280552 CGGACCGAGGGTTCCAAGA 61.281 63.158 8.64 0.00 35.25 3.02
5984 6102 1.295746 GGACCGAGGGTTCCAAGAC 59.704 63.158 0.00 0.00 35.25 3.01
5985 6103 1.080025 GACCGAGGGTTCCAAGACG 60.080 63.158 0.00 0.00 35.25 4.18
5986 6104 1.530013 GACCGAGGGTTCCAAGACGA 61.530 60.000 0.00 0.00 35.25 4.20
5987 6105 0.903454 ACCGAGGGTTCCAAGACGAT 60.903 55.000 0.00 0.00 27.29 3.73
5988 6106 0.460284 CCGAGGGTTCCAAGACGATG 60.460 60.000 0.00 0.00 0.00 3.84
5989 6107 1.084370 CGAGGGTTCCAAGACGATGC 61.084 60.000 0.00 0.00 0.00 3.91
5990 6108 0.744771 GAGGGTTCCAAGACGATGCC 60.745 60.000 0.00 0.00 0.00 4.40
5991 6109 1.201429 AGGGTTCCAAGACGATGCCT 61.201 55.000 0.00 0.00 0.00 4.75
5992 6110 0.744771 GGGTTCCAAGACGATGCCTC 60.745 60.000 0.00 0.00 0.00 4.70
5993 6111 0.744771 GGTTCCAAGACGATGCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
5994 6112 0.036388 GTTCCAAGACGATGCCTCCA 60.036 55.000 0.00 0.00 0.00 3.86
5995 6113 0.690192 TTCCAAGACGATGCCTCCAA 59.310 50.000 0.00 0.00 0.00 3.53
5996 6114 0.250234 TCCAAGACGATGCCTCCAAG 59.750 55.000 0.00 0.00 0.00 3.61
5997 6115 0.250234 CCAAGACGATGCCTCCAAGA 59.750 55.000 0.00 0.00 0.00 3.02
5998 6116 1.339055 CCAAGACGATGCCTCCAAGAA 60.339 52.381 0.00 0.00 0.00 2.52
5999 6117 2.005451 CAAGACGATGCCTCCAAGAAG 58.995 52.381 0.00 0.00 0.00 2.85
6000 6118 0.539051 AGACGATGCCTCCAAGAAGG 59.461 55.000 0.00 0.00 39.62 3.46
6001 6119 0.462759 GACGATGCCTCCAAGAAGGG 60.463 60.000 0.00 0.00 36.88 3.95
6002 6120 1.821332 CGATGCCTCCAAGAAGGGC 60.821 63.158 0.00 0.00 45.45 5.19
6005 6123 2.747855 GCCTCCAAGAAGGGCACG 60.748 66.667 0.00 0.00 44.69 5.34
6006 6124 3.068881 CCTCCAAGAAGGGCACGA 58.931 61.111 0.00 0.00 38.24 4.35
6007 6125 1.376037 CCTCCAAGAAGGGCACGAC 60.376 63.158 0.00 0.00 38.24 4.34
6008 6126 1.376037 CTCCAAGAAGGGCACGACC 60.376 63.158 0.00 0.00 38.24 4.79
6009 6127 2.111999 CTCCAAGAAGGGCACGACCA 62.112 60.000 0.00 0.00 42.05 4.02
6010 6128 1.966451 CCAAGAAGGGCACGACCAC 60.966 63.158 0.00 0.00 42.05 4.16
6011 6129 2.030562 AAGAAGGGCACGACCACG 59.969 61.111 0.00 0.00 42.05 4.94
6012 6130 3.530910 AAGAAGGGCACGACCACGG 62.531 63.158 0.00 0.00 44.46 4.94
6013 6131 3.998672 GAAGGGCACGACCACGGA 61.999 66.667 0.00 0.00 44.46 4.69
6014 6132 4.309950 AAGGGCACGACCACGGAC 62.310 66.667 0.00 0.00 44.46 4.79
6028 6146 4.867599 GGACCGTCGCCATCGTCC 62.868 72.222 2.47 2.47 36.96 4.79
6031 6149 4.266070 CCGTCGCCATCGTCCGAT 62.266 66.667 0.00 0.00 35.76 4.18
6032 6150 2.726180 CGTCGCCATCGTCCGATC 60.726 66.667 0.00 0.00 35.76 3.69
6033 6151 2.354773 GTCGCCATCGTCCGATCC 60.355 66.667 0.00 0.00 35.76 3.36
6034 6152 2.831284 TCGCCATCGTCCGATCCA 60.831 61.111 0.00 0.00 36.96 3.41
6035 6153 2.106131 CGCCATCGTCCGATCCAA 59.894 61.111 0.00 0.00 31.62 3.53
6036 6154 1.520564 CGCCATCGTCCGATCCAAA 60.521 57.895 0.00 0.00 31.62 3.28
6037 6155 1.490693 CGCCATCGTCCGATCCAAAG 61.491 60.000 0.00 0.00 31.62 2.77
6038 6156 0.179084 GCCATCGTCCGATCCAAAGA 60.179 55.000 0.00 0.00 31.62 2.52
6039 6157 1.541233 GCCATCGTCCGATCCAAAGAT 60.541 52.381 0.00 0.00 34.57 2.40
6040 6158 2.408050 CCATCGTCCGATCCAAAGATC 58.592 52.381 0.00 0.00 44.76 2.75
6052 6170 3.496331 TCCAAAGATCAGGTTTTCACCC 58.504 45.455 0.00 0.00 45.63 4.61
6053 6171 2.228822 CCAAAGATCAGGTTTTCACCCG 59.771 50.000 0.00 0.00 45.63 5.28
6054 6172 2.200373 AAGATCAGGTTTTCACCCGG 57.800 50.000 0.00 0.00 45.63 5.73
6055 6173 1.358152 AGATCAGGTTTTCACCCGGA 58.642 50.000 0.73 0.00 45.63 5.14
6056 6174 1.702957 AGATCAGGTTTTCACCCGGAA 59.297 47.619 0.73 0.00 45.63 4.30
6057 6175 1.810755 GATCAGGTTTTCACCCGGAAC 59.189 52.381 0.73 0.00 45.63 3.62
6058 6176 0.547075 TCAGGTTTTCACCCGGAACA 59.453 50.000 0.73 0.00 45.63 3.18
6059 6177 0.666374 CAGGTTTTCACCCGGAACAC 59.334 55.000 0.73 0.00 45.63 3.32
6060 6178 0.816421 AGGTTTTCACCCGGAACACG 60.816 55.000 0.73 0.00 45.63 4.49
6061 6179 0.814812 GGTTTTCACCCGGAACACGA 60.815 55.000 0.73 0.00 43.93 4.35
6062 6180 2.995442 GGTTTTCACCCGGAACACGAC 61.995 57.143 0.73 0.00 43.93 4.34
6070 6188 2.572284 GGAACACGACGGGAGGAG 59.428 66.667 2.90 0.00 0.00 3.69
6071 6189 2.273912 GGAACACGACGGGAGGAGT 61.274 63.158 2.90 0.00 0.00 3.85
6072 6190 1.080705 GAACACGACGGGAGGAGTG 60.081 63.158 2.90 0.00 43.59 3.51
6073 6191 1.521450 GAACACGACGGGAGGAGTGA 61.521 60.000 2.90 0.00 41.62 3.41
6074 6192 1.524863 AACACGACGGGAGGAGTGAG 61.525 60.000 2.90 0.00 41.62 3.51
6075 6193 1.674651 CACGACGGGAGGAGTGAGA 60.675 63.158 0.00 0.00 41.62 3.27
6076 6194 1.377463 ACGACGGGAGGAGTGAGAG 60.377 63.158 0.00 0.00 0.00 3.20
6077 6195 2.766400 CGACGGGAGGAGTGAGAGC 61.766 68.421 0.00 0.00 0.00 4.09
6078 6196 1.679305 GACGGGAGGAGTGAGAGCA 60.679 63.158 0.00 0.00 0.00 4.26
6079 6197 1.939769 GACGGGAGGAGTGAGAGCAC 61.940 65.000 0.00 0.00 45.49 4.40
6080 6198 2.716017 CGGGAGGAGTGAGAGCACC 61.716 68.421 0.00 0.00 46.32 5.01
6081 6199 1.610673 GGGAGGAGTGAGAGCACCA 60.611 63.158 0.00 0.00 46.32 4.17
6082 6200 1.594310 GGAGGAGTGAGAGCACCAC 59.406 63.158 0.00 0.00 46.32 4.16
6083 6201 1.214062 GAGGAGTGAGAGCACCACG 59.786 63.158 0.00 0.00 46.32 4.94
6084 6202 1.228583 AGGAGTGAGAGCACCACGA 60.229 57.895 0.00 0.00 46.32 4.35
6085 6203 1.080434 GGAGTGAGAGCACCACGAC 60.080 63.158 0.00 0.00 46.32 4.34
6086 6204 1.442857 GAGTGAGAGCACCACGACG 60.443 63.158 0.00 0.00 46.32 5.12
6087 6205 2.430921 GTGAGAGCACCACGACGG 60.431 66.667 0.00 0.00 39.14 4.79
6088 6206 2.596338 TGAGAGCACCACGACGGA 60.596 61.111 0.00 0.00 38.63 4.69
6089 6207 2.179517 GAGAGCACCACGACGGAG 59.820 66.667 0.00 0.00 38.63 4.63
6093 6211 3.755628 GCACCACGACGGAGCCTA 61.756 66.667 0.00 0.00 45.00 3.93
6094 6212 2.181021 CACCACGACGGAGCCTAC 59.819 66.667 0.00 0.00 38.63 3.18
6095 6213 2.282674 ACCACGACGGAGCCTACA 60.283 61.111 0.00 0.00 38.63 2.74
6096 6214 2.341101 ACCACGACGGAGCCTACAG 61.341 63.158 0.00 0.00 38.63 2.74
6097 6215 2.490217 CACGACGGAGCCTACAGG 59.510 66.667 0.00 0.00 38.53 4.00
6098 6216 2.754658 ACGACGGAGCCTACAGGG 60.755 66.667 0.00 0.00 35.18 4.45
6099 6217 2.439701 CGACGGAGCCTACAGGGA 60.440 66.667 0.00 0.00 37.23 4.20
6100 6218 2.482333 CGACGGAGCCTACAGGGAG 61.482 68.421 0.00 0.00 37.23 4.30
6101 6219 2.042843 ACGGAGCCTACAGGGAGG 60.043 66.667 0.00 0.00 39.88 4.30
6102 6220 2.279073 CGGAGCCTACAGGGAGGA 59.721 66.667 0.47 0.00 39.15 3.71
6103 6221 1.381327 CGGAGCCTACAGGGAGGAA 60.381 63.158 0.47 0.00 39.15 3.36
6104 6222 1.677637 CGGAGCCTACAGGGAGGAAC 61.678 65.000 0.47 0.00 39.15 3.62
6105 6223 0.617820 GGAGCCTACAGGGAGGAACA 60.618 60.000 0.47 0.00 39.15 3.18
6106 6224 0.537653 GAGCCTACAGGGAGGAACAC 59.462 60.000 0.47 0.00 39.15 3.32
6107 6225 1.218316 GCCTACAGGGAGGAACACG 59.782 63.158 0.47 0.00 39.15 4.49
6108 6226 1.255667 GCCTACAGGGAGGAACACGA 61.256 60.000 0.47 0.00 39.15 4.35
6109 6227 0.531200 CCTACAGGGAGGAACACGAC 59.469 60.000 0.00 0.00 39.15 4.34
6110 6228 1.254026 CTACAGGGAGGAACACGACA 58.746 55.000 0.00 0.00 0.00 4.35
6111 6229 1.825474 CTACAGGGAGGAACACGACAT 59.175 52.381 0.00 0.00 0.00 3.06
6112 6230 0.608640 ACAGGGAGGAACACGACATC 59.391 55.000 0.00 0.00 0.00 3.06
6113 6231 0.108138 CAGGGAGGAACACGACATCC 60.108 60.000 0.00 0.00 37.47 3.51
6114 6232 1.153628 GGGAGGAACACGACATCCG 60.154 63.158 0.00 0.00 40.78 4.18
6115 6233 1.810030 GGAGGAACACGACATCCGC 60.810 63.158 0.00 0.00 43.32 5.54
6116 6234 2.126071 AGGAACACGACATCCGCG 60.126 61.111 0.00 0.00 43.32 6.46
6117 6235 3.186047 GGAACACGACATCCGCGG 61.186 66.667 22.12 22.12 43.32 6.46
6118 6236 2.126228 GAACACGACATCCGCGGA 60.126 61.111 33.12 33.12 43.32 5.54
6119 6237 2.431942 AACACGACATCCGCGGAC 60.432 61.111 33.75 17.74 43.32 4.79
6120 6238 4.771356 ACACGACATCCGCGGACG 62.771 66.667 33.75 30.60 43.32 4.79
6141 6259 3.364441 CCACCGTCGACCCGTGTA 61.364 66.667 22.16 0.00 0.00 2.90
6142 6260 2.126734 CACCGTCGACCCGTGTAC 60.127 66.667 17.98 0.00 0.00 2.90
6143 6261 3.726517 ACCGTCGACCCGTGTACG 61.727 66.667 10.58 0.00 39.44 3.67
6155 6273 1.973138 CGTGTACGGACAGGTAAGTG 58.027 55.000 12.38 0.00 35.82 3.16
6156 6274 1.536766 CGTGTACGGACAGGTAAGTGA 59.463 52.381 12.38 0.00 35.82 3.41
6157 6275 2.163010 CGTGTACGGACAGGTAAGTGAT 59.837 50.000 12.38 0.00 35.82 3.06
6158 6276 3.508762 GTGTACGGACAGGTAAGTGATG 58.491 50.000 0.00 0.00 35.82 3.07
6159 6277 3.192001 GTGTACGGACAGGTAAGTGATGA 59.808 47.826 0.00 0.00 35.82 2.92
6160 6278 3.827876 TGTACGGACAGGTAAGTGATGAA 59.172 43.478 0.00 0.00 0.00 2.57
6161 6279 3.314541 ACGGACAGGTAAGTGATGAAC 57.685 47.619 0.00 0.00 0.00 3.18
6162 6280 2.028385 ACGGACAGGTAAGTGATGAACC 60.028 50.000 0.00 0.00 0.00 3.62
6163 6281 2.677037 CGGACAGGTAAGTGATGAACCC 60.677 54.545 0.00 0.00 33.53 4.11
6164 6282 2.355818 GGACAGGTAAGTGATGAACCCC 60.356 54.545 0.00 0.00 33.53 4.95
6165 6283 1.278127 ACAGGTAAGTGATGAACCCCG 59.722 52.381 0.00 0.00 33.53 5.73
6166 6284 0.909623 AGGTAAGTGATGAACCCCGG 59.090 55.000 0.00 0.00 33.53 5.73
6167 6285 0.616891 GGTAAGTGATGAACCCCGGT 59.383 55.000 0.00 0.00 0.00 5.28
6168 6286 1.677820 GGTAAGTGATGAACCCCGGTG 60.678 57.143 0.00 0.00 0.00 4.94
6169 6287 0.035820 TAAGTGATGAACCCCGGTGC 60.036 55.000 0.00 0.00 0.00 5.01
6170 6288 1.779061 AAGTGATGAACCCCGGTGCT 61.779 55.000 0.00 0.00 0.00 4.40
6171 6289 1.745489 GTGATGAACCCCGGTGCTC 60.745 63.158 0.00 0.00 0.00 4.26
6172 6290 2.124695 GATGAACCCCGGTGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
6173 6291 2.933287 ATGAACCCCGGTGCTCCA 60.933 61.111 0.00 0.00 0.00 3.86
6174 6292 3.268103 ATGAACCCCGGTGCTCCAC 62.268 63.158 0.00 0.00 0.00 4.02
6183 6301 4.021925 GTGCTCCACCCTTCCGCT 62.022 66.667 0.00 0.00 0.00 5.52
6184 6302 4.020617 TGCTCCACCCTTCCGCTG 62.021 66.667 0.00 0.00 0.00 5.18
6186 6304 4.020617 CTCCACCCTTCCGCTGCA 62.021 66.667 0.00 0.00 0.00 4.41
6187 6305 3.329889 TCCACCCTTCCGCTGCAT 61.330 61.111 0.00 0.00 0.00 3.96
6188 6306 2.825836 CCACCCTTCCGCTGCATC 60.826 66.667 0.00 0.00 0.00 3.91
6189 6307 2.825836 CACCCTTCCGCTGCATCC 60.826 66.667 0.00 0.00 0.00 3.51
6190 6308 4.115199 ACCCTTCCGCTGCATCCC 62.115 66.667 0.00 0.00 0.00 3.85
6191 6309 4.883354 CCCTTCCGCTGCATCCCC 62.883 72.222 0.00 0.00 0.00 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.884075 TAAGTGACATCGCCACCGCT 61.884 55.000 0.00 0.00 35.23 5.52
48 49 0.987294 CCATCAGGCGGGGATAGAAT 59.013 55.000 0.00 0.00 0.00 2.40
62 63 2.359214 GACGATGCTAGACTCACCATCA 59.641 50.000 0.00 0.00 35.08 3.07
111 112 1.726853 GTCCAAATCTGTGAGACCCG 58.273 55.000 0.00 0.00 0.00 5.28
114 115 2.069273 CACCGTCCAAATCTGTGAGAC 58.931 52.381 0.00 0.00 0.00 3.36
119 120 0.606401 CCAGCACCGTCCAAATCTGT 60.606 55.000 0.00 0.00 0.00 3.41
121 122 0.321653 GACCAGCACCGTCCAAATCT 60.322 55.000 0.00 0.00 0.00 2.40
126 127 1.227823 CAAAGACCAGCACCGTCCA 60.228 57.895 0.00 0.00 0.00 4.02
129 130 0.606401 CCATCAAAGACCAGCACCGT 60.606 55.000 0.00 0.00 0.00 4.83
151 152 1.359848 CGAAGACCGGATCCAAACAG 58.640 55.000 9.46 0.00 33.91 3.16
171 172 1.578583 AACACTCAAACGAAGACGGG 58.421 50.000 0.00 0.00 44.46 5.28
179 180 6.797033 GGATCAAATCTGTAAACACTCAAACG 59.203 38.462 0.00 0.00 0.00 3.60
193 194 9.319143 AGTCGTAAAATAGAAGGATCAAATCTG 57.681 33.333 0.00 0.00 0.00 2.90
207 208 8.804743 TCGCTGAAGAATAAAGTCGTAAAATAG 58.195 33.333 0.00 0.00 0.00 1.73
209 210 7.201530 CCTCGCTGAAGAATAAAGTCGTAAAAT 60.202 37.037 0.00 0.00 0.00 1.82
210 211 6.090358 CCTCGCTGAAGAATAAAGTCGTAAAA 59.910 38.462 0.00 0.00 0.00 1.52
212 213 5.100259 CCTCGCTGAAGAATAAAGTCGTAA 58.900 41.667 0.00 0.00 0.00 3.18
219 220 4.072131 AGCAAACCTCGCTGAAGAATAAA 58.928 39.130 0.00 0.00 38.60 1.40
229 230 1.670406 CAGAGCAGCAAACCTCGCT 60.670 57.895 0.00 0.00 41.47 4.93
234 235 2.647297 GCACCAGAGCAGCAAACC 59.353 61.111 0.00 0.00 0.00 3.27
264 265 2.806608 TGTTGTAGTGGGAAGTCGTC 57.193 50.000 0.00 0.00 0.00 4.20
267 268 3.487120 ACCTTGTTGTAGTGGGAAGTC 57.513 47.619 0.00 0.00 0.00 3.01
292 301 2.032528 CTTCGCCACTGGAGCCAA 59.967 61.111 0.00 0.00 0.00 4.52
293 302 4.020617 CCTTCGCCACTGGAGCCA 62.021 66.667 0.00 0.00 0.00 4.75
301 310 4.467084 TCATCGCCCCTTCGCCAC 62.467 66.667 0.00 0.00 0.00 5.01
339 349 3.362110 GCGACGACTATAAGCATTGAAGC 60.362 47.826 0.00 0.00 0.00 3.86
345 355 3.058155 CACCTAGCGACGACTATAAGCAT 60.058 47.826 0.00 0.00 0.00 3.79
351 361 2.152830 GGATCACCTAGCGACGACTAT 58.847 52.381 0.00 0.00 0.00 2.12
391 401 8.480643 AGCAGTACAAAGAACAGATGTAATAC 57.519 34.615 0.00 0.00 31.85 1.89
405 415 8.484641 TTCTCTTCAATCATAGCAGTACAAAG 57.515 34.615 0.00 0.00 0.00 2.77
414 424 9.539825 TTTCAGTCTATTCTCTTCAATCATAGC 57.460 33.333 0.00 0.00 0.00 2.97
480 491 9.965902 AGAGTTTATTCCACAATGATTAGAGTT 57.034 29.630 0.00 0.00 0.00 3.01
481 492 9.965902 AAGAGTTTATTCCACAATGATTAGAGT 57.034 29.630 0.00 0.00 0.00 3.24
493 504 8.530269 TTCGAGAGTAAAAGAGTTTATTCCAC 57.470 34.615 0.00 0.00 36.89 4.02
559 570 3.365364 GCTTGAAATGTGACTTTCGAGGG 60.365 47.826 18.10 4.57 42.90 4.30
586 597 6.494893 TTTCTTGTCCTCGTTCCATTTATG 57.505 37.500 0.00 0.00 0.00 1.90
589 600 6.215845 CAAATTTCTTGTCCTCGTTCCATTT 58.784 36.000 0.00 0.00 0.00 2.32
730 742 2.445525 GGGGATAAATGGAGGCCTAACA 59.554 50.000 4.42 9.02 0.00 2.41
731 743 2.716969 AGGGGATAAATGGAGGCCTAAC 59.283 50.000 4.42 1.67 0.00 2.34
742 754 5.326372 AGAGGATATGGGAGGGGATAAAT 57.674 43.478 0.00 0.00 0.00 1.40
776 796 2.435586 CAACTGAGGCAGCGAGGG 60.436 66.667 0.00 0.00 34.37 4.30
812 832 3.954258 GGAGGGAGAAGAAGAAGAGAGAG 59.046 52.174 0.00 0.00 0.00 3.20
821 843 1.788229 GGAGGAGGAGGGAGAAGAAG 58.212 60.000 0.00 0.00 0.00 2.85
822 844 0.033011 CGGAGGAGGAGGGAGAAGAA 60.033 60.000 0.00 0.00 0.00 2.52
823 845 1.615814 CGGAGGAGGAGGGAGAAGA 59.384 63.158 0.00 0.00 0.00 2.87
838 860 3.327404 GGTGGAAGAAGGGGCGGA 61.327 66.667 0.00 0.00 0.00 5.54
839 861 3.330720 AGGTGGAAGAAGGGGCGG 61.331 66.667 0.00 0.00 0.00 6.13
840 862 2.124507 TTGAGGTGGAAGAAGGGGCG 62.125 60.000 0.00 0.00 0.00 6.13
1119 1144 2.203082 AGCACGCAGTCACCTGAGA 61.203 57.895 0.44 0.00 41.61 3.27
1320 1387 2.102588 GCTACCGGAGAAGCCTAAATCA 59.897 50.000 9.46 0.00 31.61 2.57
1362 1429 1.659233 CAACGCCACCTGCATTTGA 59.341 52.632 0.00 0.00 41.33 2.69
1417 1484 5.602628 ACACTCTTCCTTACAAACTCAGTC 58.397 41.667 0.00 0.00 0.00 3.51
1420 1487 6.474140 TGTACACTCTTCCTTACAAACTCA 57.526 37.500 0.00 0.00 0.00 3.41
1493 1560 1.076533 AACGTAGGAATCAGCACGCG 61.077 55.000 3.53 3.53 37.92 6.01
1561 1628 4.046938 ACTCACTACTTGGCATACATCG 57.953 45.455 0.00 0.00 0.00 3.84
1576 1643 4.989279 ACAAAAGCAACATCAACTCACT 57.011 36.364 0.00 0.00 0.00 3.41
1577 1644 5.343249 AGAACAAAAGCAACATCAACTCAC 58.657 37.500 0.00 0.00 0.00 3.51
1578 1645 5.581126 AGAACAAAAGCAACATCAACTCA 57.419 34.783 0.00 0.00 0.00 3.41
1579 1646 6.035843 TCAAGAACAAAAGCAACATCAACTC 58.964 36.000 0.00 0.00 0.00 3.01
1580 1647 5.964758 TCAAGAACAAAAGCAACATCAACT 58.035 33.333 0.00 0.00 0.00 3.16
1626 1694 6.177610 TGACCTGGGAAAATACTAACATGAC 58.822 40.000 0.00 0.00 0.00 3.06
1695 1765 7.773690 TCCTCTTCCTTATTTACATTGCTAACC 59.226 37.037 0.00 0.00 0.00 2.85
1749 1819 0.835941 CTGGAATAGAGCAGCCTGGT 59.164 55.000 0.00 0.00 0.00 4.00
1812 1882 3.384789 GGTGCTGAGTACTATCATGTGGA 59.615 47.826 0.00 0.00 0.00 4.02
1861 1931 3.153919 TGGTGGAGGAAAGAAAAATCCG 58.846 45.455 0.00 0.00 40.78 4.18
1866 1936 3.140144 AGACCATGGTGGAGGAAAGAAAA 59.860 43.478 25.52 0.00 40.96 2.29
2009 2079 6.493115 TCCAACTATGTTGTCATGAAAATGGT 59.507 34.615 11.68 0.00 35.70 3.55
2010 2080 6.923012 TCCAACTATGTTGTCATGAAAATGG 58.077 36.000 0.61 4.57 35.70 3.16
2046 2116 7.011109 AGCTTAGTGTGTAAAGTGTAAACAGTG 59.989 37.037 1.61 0.00 0.00 3.66
2116 2188 5.500234 AGCAGATACTTTGGTTAATGAGCA 58.500 37.500 0.00 0.00 0.00 4.26
2118 2190 9.113838 ACAATAGCAGATACTTTGGTTAATGAG 57.886 33.333 0.00 0.00 0.00 2.90
2192 2264 1.402968 GTATGCCCTGCTTGTCACATG 59.597 52.381 0.00 0.00 0.00 3.21
2290 2366 6.893005 TGTTAAAGGGGTATTAAGTTCCATGG 59.107 38.462 4.97 4.97 0.00 3.66
2320 2396 5.389859 AGCTAACATAGAGAGCTGCATAG 57.610 43.478 1.02 0.00 44.77 2.23
2337 2413 5.221501 ACGAGGTTACCAAACAAGTAGCTAA 60.222 40.000 3.51 0.00 37.34 3.09
2359 2435 4.290155 CAAAATTCCAGAGTTGTTCCACG 58.710 43.478 0.00 0.00 0.00 4.94
2368 2444 0.598065 GCCACGCAAAATTCCAGAGT 59.402 50.000 0.00 0.00 0.00 3.24
2508 2584 6.749923 ACTGAGAGCTGGAAATCATAAAAC 57.250 37.500 0.00 0.00 0.00 2.43
2643 2719 9.146586 AGCAATCTATTTTCTTTGCCCATAATA 57.853 29.630 3.10 0.00 44.21 0.98
2695 2771 9.696917 AGAAGAAAACTGGCATAAACTATTTTG 57.303 29.630 0.00 0.00 0.00 2.44
2970 3049 7.093377 TGCTATTTTAGGAGTGGAATGCATTTT 60.093 33.333 14.33 0.00 0.00 1.82
2997 3076 3.369756 TCCGTTGCTAAATCGCTAACAAG 59.630 43.478 0.00 0.00 0.00 3.16
2998 3077 3.327626 TCCGTTGCTAAATCGCTAACAA 58.672 40.909 0.00 0.00 0.00 2.83
3090 3169 3.737850 AGAAAGAAGAACAGTGAGGCAG 58.262 45.455 0.00 0.00 0.00 4.85
3203 3283 7.107542 AGCTCTATATCGTTAGGACTTAGGAG 58.892 42.308 0.00 0.00 0.00 3.69
3215 3295 7.559590 AAAAAGATGCAAGCTCTATATCGTT 57.440 32.000 0.00 0.00 0.00 3.85
3302 3382 5.673068 GCATGCTGTGATTGAAGTACAGAAG 60.673 44.000 11.37 5.43 43.35 2.85
3313 3393 6.754675 TCAAAATAGATTGCATGCTGTGATTG 59.245 34.615 20.33 12.97 0.00 2.67
3450 3530 5.994054 TGCATATCATTAGAGCAGAGGAAAC 59.006 40.000 0.00 0.00 0.00 2.78
3750 3840 1.625818 ACTTTGTGCCTGGACTCTAGG 59.374 52.381 4.02 4.02 38.39 3.02
3801 3891 1.740297 TGTGTTGCTACGTTTGGTGT 58.260 45.000 0.00 0.00 0.00 4.16
3830 3920 4.288366 TGGGACAATCCACTGTGAGATTAA 59.712 41.667 17.96 5.82 38.64 1.40
3895 3985 6.044754 AGAGAAAATATCAGGCCATCCACATA 59.955 38.462 5.01 0.00 33.74 2.29
3905 3995 6.995091 ACTGAATGGTAGAGAAAATATCAGGC 59.005 38.462 0.00 0.00 36.86 4.85
3906 3996 8.970859 AACTGAATGGTAGAGAAAATATCAGG 57.029 34.615 0.00 0.00 36.86 3.86
3915 4005 7.452880 CCATTTTGAACTGAATGGTAGAGAA 57.547 36.000 6.89 0.00 44.61 2.87
4081 4171 5.813513 AATTTGAGCTGGGAAAGTGAAAT 57.186 34.783 0.00 0.00 0.00 2.17
4138 4228 5.013287 TGGACTAATACCTGTTAAACAGCCA 59.987 40.000 0.00 0.00 44.63 4.75
4139 4229 5.493809 TGGACTAATACCTGTTAAACAGCC 58.506 41.667 0.00 0.00 44.63 4.85
4180 4270 4.156556 CCCATAACAGAACACAATCCACTG 59.843 45.833 0.00 0.00 35.14 3.66
4272 4362 5.789574 ATAGTGTAGACATGGGGGAAAAA 57.210 39.130 0.00 0.00 0.00 1.94
4277 4367 4.080582 TGACAAATAGTGTAGACATGGGGG 60.081 45.833 0.00 0.00 41.96 5.40
4278 4368 4.876107 GTGACAAATAGTGTAGACATGGGG 59.124 45.833 0.00 0.00 41.96 4.96
4308 4398 4.663636 AGAAAATTGAGGTAAGTTCGCG 57.336 40.909 0.00 0.00 0.00 5.87
4311 4401 6.420903 GCACCAAAGAAAATTGAGGTAAGTTC 59.579 38.462 0.00 0.00 31.84 3.01
4338 4428 7.227910 CCGCCTGGTATTTATAACATAACAGTT 59.772 37.037 19.87 0.00 39.44 3.16
4390 4480 3.243670 TGAGAGCAACTGACAAGAGTGAG 60.244 47.826 0.00 0.00 34.90 3.51
4403 4493 2.744202 CCCAATACACTGTGAGAGCAAC 59.256 50.000 15.86 0.00 0.00 4.17
4526 4616 7.338449 ACCGCCAAAATGTTTAGTCTATTGTAT 59.662 33.333 0.00 0.00 0.00 2.29
4545 4635 4.099573 TGAAAATTAACAGGAAACCGCCAA 59.900 37.500 0.00 0.00 0.00 4.52
4546 4636 3.637229 TGAAAATTAACAGGAAACCGCCA 59.363 39.130 0.00 0.00 0.00 5.69
4710 4800 5.762045 ACGTCATTTGCAATTATAGCCATC 58.238 37.500 0.00 0.00 0.00 3.51
4767 4857 4.899239 GCCCCAGCGACGGATGAG 62.899 72.222 0.00 0.00 0.00 2.90
4788 4878 0.984230 ACCACCGACAGAACATCCAT 59.016 50.000 0.00 0.00 0.00 3.41
4809 4899 5.353678 CCTCTGTTCATCTGTTGGATTTCTC 59.646 44.000 0.00 0.00 31.27 2.87
4810 4900 5.251764 CCTCTGTTCATCTGTTGGATTTCT 58.748 41.667 0.00 0.00 31.27 2.52
4839 4929 4.937620 TGGAAGTGAGGATCGAAAATGAAG 59.062 41.667 0.00 0.00 38.61 3.02
4928 5018 9.582431 CTAATACAGAAGTCCGACTATTTTGAA 57.418 33.333 0.26 0.00 0.00 2.69
4929 5019 8.963725 TCTAATACAGAAGTCCGACTATTTTGA 58.036 33.333 0.26 0.00 0.00 2.69
4934 5024 8.522542 AAACTCTAATACAGAAGTCCGACTAT 57.477 34.615 0.26 0.00 31.12 2.12
4935 5025 7.609146 TGAAACTCTAATACAGAAGTCCGACTA 59.391 37.037 0.26 0.00 31.12 2.59
4936 5026 6.433404 TGAAACTCTAATACAGAAGTCCGACT 59.567 38.462 0.00 0.00 31.12 4.18
4937 5027 6.527372 GTGAAACTCTAATACAGAAGTCCGAC 59.473 42.308 0.00 0.00 31.12 4.79
4939 5029 6.872670 GTGAAACTCTAATACAGAAGTCCG 57.127 41.667 0.00 0.00 31.12 4.79
4974 5064 5.405331 AAACTACGAAGCTTTCAAGACAC 57.595 39.130 0.00 0.00 0.00 3.67
4979 5069 8.492748 CAGTTGTATAAACTACGAAGCTTTCAA 58.507 33.333 0.00 0.00 36.59 2.69
4983 5073 7.958053 AACAGTTGTATAAACTACGAAGCTT 57.042 32.000 0.00 0.00 36.59 3.74
4984 5074 7.958053 AAACAGTTGTATAAACTACGAAGCT 57.042 32.000 0.00 0.00 36.59 3.74
5010 5100 6.182507 TCCAGTTTTACATGTCCTACTGTT 57.817 37.500 22.28 0.00 33.04 3.16
5011 5101 5.818678 TCCAGTTTTACATGTCCTACTGT 57.181 39.130 22.28 0.00 33.04 3.55
5016 5106 5.568620 AGAGTTCCAGTTTTACATGTCCT 57.431 39.130 0.00 0.00 0.00 3.85
5017 5107 6.128254 GCTTAGAGTTCCAGTTTTACATGTCC 60.128 42.308 0.00 0.00 0.00 4.02
5019 5109 6.296026 TGCTTAGAGTTCCAGTTTTACATGT 58.704 36.000 2.69 2.69 0.00 3.21
5023 5113 5.548406 TCCTGCTTAGAGTTCCAGTTTTAC 58.452 41.667 0.00 0.00 0.00 2.01
5024 5114 5.818678 TCCTGCTTAGAGTTCCAGTTTTA 57.181 39.130 0.00 0.00 0.00 1.52
5025 5115 4.706842 TCCTGCTTAGAGTTCCAGTTTT 57.293 40.909 0.00 0.00 0.00 2.43
5029 5119 4.100653 TGATGATCCTGCTTAGAGTTCCAG 59.899 45.833 0.00 0.00 0.00 3.86
5030 5120 4.033009 TGATGATCCTGCTTAGAGTTCCA 58.967 43.478 0.00 0.00 0.00 3.53
5031 5121 4.679373 TGATGATCCTGCTTAGAGTTCC 57.321 45.455 0.00 0.00 0.00 3.62
5037 5127 8.312564 TCTTATCATCTTGATGATCCTGCTTAG 58.687 37.037 24.13 13.40 41.20 2.18
5054 5144 8.768019 TCGATTTGATGTTCATGTCTTATCATC 58.232 33.333 0.00 0.00 34.28 2.92
5062 5177 4.731961 GCATGTCGATTTGATGTTCATGTC 59.268 41.667 8.17 0.00 35.25 3.06
5065 5180 4.968812 TGCATGTCGATTTGATGTTCAT 57.031 36.364 0.00 0.00 0.00 2.57
5111 5226 1.270550 GGATGTTGAACTGCCACCTTG 59.729 52.381 0.00 0.00 0.00 3.61
5143 5258 6.183360 GCGTAAGTGTCATTTGTAAGCAGTAT 60.183 38.462 0.00 0.00 41.68 2.12
5189 5304 1.483827 CTGCTCCCACTTCTATCTGCA 59.516 52.381 0.00 0.00 0.00 4.41
5197 5312 0.673022 CACTGCTCTGCTCCCACTTC 60.673 60.000 0.00 0.00 0.00 3.01
5201 5316 3.324930 CCCACTGCTCTGCTCCCA 61.325 66.667 0.00 0.00 0.00 4.37
5449 5566 1.260538 TGCTGGGTGGCTCAGACTAG 61.261 60.000 0.00 0.00 34.36 2.57
5577 5694 7.717875 ACCTTACTGATTTTGTTACAACTAGCA 59.282 33.333 0.00 0.00 0.00 3.49
5672 5789 1.302033 GTCCTGCACCACCACTCAG 60.302 63.158 0.00 0.00 0.00 3.35
5706 5823 0.814010 CCGCACCTAAATCCGGGAAG 60.814 60.000 0.00 0.00 37.21 3.46
5770 5888 9.206870 CCTTTTTCGGTAAGTACTAATACACAA 57.793 33.333 0.00 0.00 33.30 3.33
5796 5914 6.509656 CTTTATTTATAAAGCGGGGGAAACC 58.490 40.000 8.78 0.00 44.97 3.27
5811 5929 8.466798 GGATGTAAGTGTTGGTGCTTTATTTAT 58.533 33.333 0.00 0.00 0.00 1.40
5812 5930 7.448777 TGGATGTAAGTGTTGGTGCTTTATTTA 59.551 33.333 0.00 0.00 0.00 1.40
5813 5931 6.266558 TGGATGTAAGTGTTGGTGCTTTATTT 59.733 34.615 0.00 0.00 0.00 1.40
5814 5932 5.772672 TGGATGTAAGTGTTGGTGCTTTATT 59.227 36.000 0.00 0.00 0.00 1.40
5815 5933 5.321102 TGGATGTAAGTGTTGGTGCTTTAT 58.679 37.500 0.00 0.00 0.00 1.40
5816 5934 4.720046 TGGATGTAAGTGTTGGTGCTTTA 58.280 39.130 0.00 0.00 0.00 1.85
5817 5935 3.561143 TGGATGTAAGTGTTGGTGCTTT 58.439 40.909 0.00 0.00 0.00 3.51
5818 5936 3.222173 TGGATGTAAGTGTTGGTGCTT 57.778 42.857 0.00 0.00 0.00 3.91
5819 5937 2.949177 TGGATGTAAGTGTTGGTGCT 57.051 45.000 0.00 0.00 0.00 4.40
5820 5938 2.884639 ACTTGGATGTAAGTGTTGGTGC 59.115 45.455 0.00 0.00 39.33 5.01
5821 5939 5.048991 GGTTACTTGGATGTAAGTGTTGGTG 60.049 44.000 0.00 0.00 40.85 4.17
5822 5940 5.067954 GGTTACTTGGATGTAAGTGTTGGT 58.932 41.667 0.00 0.00 40.85 3.67
5823 5941 4.153475 CGGTTACTTGGATGTAAGTGTTGG 59.847 45.833 0.00 0.00 40.85 3.77
5824 5942 4.992319 TCGGTTACTTGGATGTAAGTGTTG 59.008 41.667 0.00 0.00 40.85 3.33
5825 5943 5.217978 TCGGTTACTTGGATGTAAGTGTT 57.782 39.130 0.00 0.00 40.85 3.32
5826 5944 4.877378 TCGGTTACTTGGATGTAAGTGT 57.123 40.909 0.00 0.00 40.85 3.55
5827 5945 6.334989 TGTATCGGTTACTTGGATGTAAGTG 58.665 40.000 0.00 0.00 40.85 3.16
5828 5946 6.534475 TGTATCGGTTACTTGGATGTAAGT 57.466 37.500 0.00 0.00 43.03 2.24
5829 5947 7.463648 CGTTTGTATCGGTTACTTGGATGTAAG 60.464 40.741 0.00 0.00 33.67 2.34
5830 5948 6.310956 CGTTTGTATCGGTTACTTGGATGTAA 59.689 38.462 0.00 0.00 0.00 2.41
5831 5949 5.806502 CGTTTGTATCGGTTACTTGGATGTA 59.193 40.000 0.00 0.00 0.00 2.29
5832 5950 4.628333 CGTTTGTATCGGTTACTTGGATGT 59.372 41.667 0.00 0.00 0.00 3.06
5833 5951 4.493545 GCGTTTGTATCGGTTACTTGGATG 60.494 45.833 0.00 0.00 0.00 3.51
5834 5952 3.619929 GCGTTTGTATCGGTTACTTGGAT 59.380 43.478 0.00 0.00 0.00 3.41
5835 5953 2.995258 GCGTTTGTATCGGTTACTTGGA 59.005 45.455 0.00 0.00 0.00 3.53
5836 5954 2.737783 TGCGTTTGTATCGGTTACTTGG 59.262 45.455 0.00 0.00 0.00 3.61
5837 5955 3.719763 CGTGCGTTTGTATCGGTTACTTG 60.720 47.826 0.00 0.00 0.00 3.16
5838 5956 2.409378 CGTGCGTTTGTATCGGTTACTT 59.591 45.455 0.00 0.00 0.00 2.24
5839 5957 1.987770 CGTGCGTTTGTATCGGTTACT 59.012 47.619 0.00 0.00 0.00 2.24
5840 5958 1.525584 GCGTGCGTTTGTATCGGTTAC 60.526 52.381 0.00 0.00 0.00 2.50
5841 5959 0.714994 GCGTGCGTTTGTATCGGTTA 59.285 50.000 0.00 0.00 0.00 2.85
5842 5960 1.494189 GCGTGCGTTTGTATCGGTT 59.506 52.632 0.00 0.00 0.00 4.44
5843 5961 2.385091 GGCGTGCGTTTGTATCGGT 61.385 57.895 0.00 0.00 0.00 4.69
5844 5962 2.384309 TGGCGTGCGTTTGTATCGG 61.384 57.895 0.00 0.00 0.00 4.18
5845 5963 1.225637 GTGGCGTGCGTTTGTATCG 60.226 57.895 0.00 0.00 0.00 2.92
5846 5964 0.452122 GTGTGGCGTGCGTTTGTATC 60.452 55.000 0.00 0.00 0.00 2.24
5847 5965 1.160946 TGTGTGGCGTGCGTTTGTAT 61.161 50.000 0.00 0.00 0.00 2.29
5848 5966 1.366854 TTGTGTGGCGTGCGTTTGTA 61.367 50.000 0.00 0.00 0.00 2.41
5849 5967 2.691771 TTGTGTGGCGTGCGTTTGT 61.692 52.632 0.00 0.00 0.00 2.83
5850 5968 2.101185 TTGTGTGGCGTGCGTTTG 59.899 55.556 0.00 0.00 0.00 2.93
5851 5969 2.101380 GTTGTGTGGCGTGCGTTT 59.899 55.556 0.00 0.00 0.00 3.60
5852 5970 3.883180 GGTTGTGTGGCGTGCGTT 61.883 61.111 0.00 0.00 0.00 4.84
5855 5973 3.483235 CTTGGGTTGTGTGGCGTGC 62.483 63.158 0.00 0.00 0.00 5.34
5856 5974 2.721231 CTTGGGTTGTGTGGCGTG 59.279 61.111 0.00 0.00 0.00 5.34
5857 5975 2.518349 CCTTGGGTTGTGTGGCGT 60.518 61.111 0.00 0.00 0.00 5.68
5858 5976 3.977244 GCCTTGGGTTGTGTGGCG 61.977 66.667 0.00 0.00 33.96 5.69
5859 5977 2.367868 CTTGCCTTGGGTTGTGTGGC 62.368 60.000 0.00 0.00 43.49 5.01
5860 5978 0.754957 TCTTGCCTTGGGTTGTGTGG 60.755 55.000 0.00 0.00 0.00 4.17
5861 5979 1.110442 TTCTTGCCTTGGGTTGTGTG 58.890 50.000 0.00 0.00 0.00 3.82
5862 5980 1.480545 GTTTCTTGCCTTGGGTTGTGT 59.519 47.619 0.00 0.00 0.00 3.72
5863 5981 1.480137 TGTTTCTTGCCTTGGGTTGTG 59.520 47.619 0.00 0.00 0.00 3.33
5864 5982 1.859302 TGTTTCTTGCCTTGGGTTGT 58.141 45.000 0.00 0.00 0.00 3.32
5865 5983 2.977772 TTGTTTCTTGCCTTGGGTTG 57.022 45.000 0.00 0.00 0.00 3.77
5866 5984 3.990959 TTTTGTTTCTTGCCTTGGGTT 57.009 38.095 0.00 0.00 0.00 4.11
5867 5985 3.990959 TTTTTGTTTCTTGCCTTGGGT 57.009 38.095 0.00 0.00 0.00 4.51
5868 5986 3.003585 GCATTTTTGTTTCTTGCCTTGGG 59.996 43.478 0.00 0.00 0.00 4.12
5869 5987 4.213596 GCATTTTTGTTTCTTGCCTTGG 57.786 40.909 0.00 0.00 0.00 3.61
5874 5992 1.530720 CCCGGCATTTTTGTTTCTTGC 59.469 47.619 0.00 0.00 0.00 4.01
5875 5993 1.530720 GCCCGGCATTTTTGTTTCTTG 59.469 47.619 3.91 0.00 0.00 3.02
5876 5994 1.139853 TGCCCGGCATTTTTGTTTCTT 59.860 42.857 8.43 0.00 31.71 2.52
5877 5995 0.755686 TGCCCGGCATTTTTGTTTCT 59.244 45.000 8.43 0.00 31.71 2.52
5878 5996 0.865111 GTGCCCGGCATTTTTGTTTC 59.135 50.000 16.96 0.00 41.91 2.78
5879 5997 0.533978 GGTGCCCGGCATTTTTGTTT 60.534 50.000 16.96 0.00 41.91 2.83
5880 5998 1.070615 GGTGCCCGGCATTTTTGTT 59.929 52.632 16.96 0.00 41.91 2.83
5881 5999 2.740438 GGTGCCCGGCATTTTTGT 59.260 55.556 16.96 0.00 41.91 2.83
5882 6000 2.432285 CGGTGCCCGGCATTTTTG 60.432 61.111 16.96 0.10 44.15 2.44
5892 6010 1.782028 GAAGTTGTGTGTCGGTGCCC 61.782 60.000 0.00 0.00 0.00 5.36
5893 6011 1.092921 TGAAGTTGTGTGTCGGTGCC 61.093 55.000 0.00 0.00 0.00 5.01
5894 6012 0.730265 TTGAAGTTGTGTGTCGGTGC 59.270 50.000 0.00 0.00 0.00 5.01
5895 6013 1.267334 CGTTGAAGTTGTGTGTCGGTG 60.267 52.381 0.00 0.00 0.00 4.94
5896 6014 1.003851 CGTTGAAGTTGTGTGTCGGT 58.996 50.000 0.00 0.00 0.00 4.69
5897 6015 1.005347 GTCGTTGAAGTTGTGTGTCGG 60.005 52.381 0.00 0.00 0.00 4.79
5898 6016 1.924524 AGTCGTTGAAGTTGTGTGTCG 59.075 47.619 0.00 0.00 0.00 4.35
5899 6017 3.244579 GGTAGTCGTTGAAGTTGTGTGTC 59.755 47.826 0.00 0.00 0.00 3.67
5900 6018 3.192466 GGTAGTCGTTGAAGTTGTGTGT 58.808 45.455 0.00 0.00 0.00 3.72
5901 6019 3.000925 GTGGTAGTCGTTGAAGTTGTGTG 59.999 47.826 0.00 0.00 0.00 3.82
5902 6020 3.192466 GTGGTAGTCGTTGAAGTTGTGT 58.808 45.455 0.00 0.00 0.00 3.72
5903 6021 3.191669 TGTGGTAGTCGTTGAAGTTGTG 58.808 45.455 0.00 0.00 0.00 3.33
5904 6022 3.530265 TGTGGTAGTCGTTGAAGTTGT 57.470 42.857 0.00 0.00 0.00 3.32
5905 6023 4.116961 TCTTGTGGTAGTCGTTGAAGTTG 58.883 43.478 0.00 0.00 0.00 3.16
5906 6024 4.395959 TCTTGTGGTAGTCGTTGAAGTT 57.604 40.909 0.00 0.00 0.00 2.66
5907 6025 4.098960 TCTTCTTGTGGTAGTCGTTGAAGT 59.901 41.667 0.00 0.00 33.57 3.01
5908 6026 4.617959 TCTTCTTGTGGTAGTCGTTGAAG 58.382 43.478 0.00 0.00 0.00 3.02
5909 6027 4.340097 TCTCTTCTTGTGGTAGTCGTTGAA 59.660 41.667 0.00 0.00 0.00 2.69
5910 6028 3.887110 TCTCTTCTTGTGGTAGTCGTTGA 59.113 43.478 0.00 0.00 0.00 3.18
5911 6029 4.023107 TCTCTCTTCTTGTGGTAGTCGTTG 60.023 45.833 0.00 0.00 0.00 4.10
5912 6030 4.142790 TCTCTCTTCTTGTGGTAGTCGTT 58.857 43.478 0.00 0.00 0.00 3.85
5913 6031 3.752665 TCTCTCTTCTTGTGGTAGTCGT 58.247 45.455 0.00 0.00 0.00 4.34
5914 6032 4.495019 CGATCTCTCTTCTTGTGGTAGTCG 60.495 50.000 0.00 0.00 0.00 4.18
5915 6033 4.396790 ACGATCTCTCTTCTTGTGGTAGTC 59.603 45.833 0.00 0.00 0.00 2.59
5916 6034 4.337145 ACGATCTCTCTTCTTGTGGTAGT 58.663 43.478 0.00 0.00 0.00 2.73
5917 6035 4.201970 GGACGATCTCTCTTCTTGTGGTAG 60.202 50.000 0.00 0.00 0.00 3.18
5918 6036 3.695060 GGACGATCTCTCTTCTTGTGGTA 59.305 47.826 0.00 0.00 0.00 3.25
5919 6037 2.494073 GGACGATCTCTCTTCTTGTGGT 59.506 50.000 0.00 0.00 0.00 4.16
5920 6038 2.478709 CGGACGATCTCTCTTCTTGTGG 60.479 54.545 0.00 0.00 0.00 4.17
5921 6039 2.478709 CCGGACGATCTCTCTTCTTGTG 60.479 54.545 0.00 0.00 0.00 3.33
5922 6040 1.746220 CCGGACGATCTCTCTTCTTGT 59.254 52.381 0.00 0.00 0.00 3.16
5923 6041 1.066303 CCCGGACGATCTCTCTTCTTG 59.934 57.143 0.73 0.00 0.00 3.02
5924 6042 1.064611 TCCCGGACGATCTCTCTTCTT 60.065 52.381 0.73 0.00 0.00 2.52
5925 6043 0.547075 TCCCGGACGATCTCTCTTCT 59.453 55.000 0.73 0.00 0.00 2.85
5926 6044 1.335496 CTTCCCGGACGATCTCTCTTC 59.665 57.143 0.73 0.00 0.00 2.87
5927 6045 1.064611 TCTTCCCGGACGATCTCTCTT 60.065 52.381 0.73 0.00 0.00 2.85
5928 6046 0.547075 TCTTCCCGGACGATCTCTCT 59.453 55.000 0.73 0.00 0.00 3.10
5929 6047 1.335496 CTTCTTCCCGGACGATCTCTC 59.665 57.143 0.73 0.00 0.00 3.20
5930 6048 1.341187 ACTTCTTCCCGGACGATCTCT 60.341 52.381 0.73 0.00 0.00 3.10
5931 6049 1.104630 ACTTCTTCCCGGACGATCTC 58.895 55.000 0.73 0.00 0.00 2.75
5932 6050 0.818296 CACTTCTTCCCGGACGATCT 59.182 55.000 0.73 0.00 0.00 2.75
5933 6051 0.806492 GCACTTCTTCCCGGACGATC 60.806 60.000 0.73 0.00 0.00 3.69
5934 6052 1.218316 GCACTTCTTCCCGGACGAT 59.782 57.895 0.73 0.00 0.00 3.73
5935 6053 1.750341 TTGCACTTCTTCCCGGACGA 61.750 55.000 0.73 0.00 0.00 4.20
5936 6054 1.301401 TTGCACTTCTTCCCGGACG 60.301 57.895 0.73 0.00 0.00 4.79
5937 6055 1.566018 CGTTGCACTTCTTCCCGGAC 61.566 60.000 0.73 0.00 0.00 4.79
5938 6056 1.301401 CGTTGCACTTCTTCCCGGA 60.301 57.895 0.73 0.00 0.00 5.14
5939 6057 2.325082 CCGTTGCACTTCTTCCCGG 61.325 63.158 0.00 0.00 0.00 5.73
5940 6058 1.301401 TCCGTTGCACTTCTTCCCG 60.301 57.895 0.00 0.00 0.00 5.14
5941 6059 1.235281 GGTCCGTTGCACTTCTTCCC 61.235 60.000 0.00 0.00 0.00 3.97
5942 6060 0.534203 TGGTCCGTTGCACTTCTTCC 60.534 55.000 0.00 0.00 0.00 3.46
5943 6061 0.586802 GTGGTCCGTTGCACTTCTTC 59.413 55.000 0.00 0.00 0.00 2.87
5944 6062 1.157870 CGTGGTCCGTTGCACTTCTT 61.158 55.000 0.00 0.00 0.00 2.52
5945 6063 1.594293 CGTGGTCCGTTGCACTTCT 60.594 57.895 0.00 0.00 0.00 2.85
5946 6064 2.935955 CGTGGTCCGTTGCACTTC 59.064 61.111 0.00 0.00 0.00 3.01
5947 6065 3.276846 GCGTGGTCCGTTGCACTT 61.277 61.111 0.00 0.00 39.32 3.16
5964 6082 3.310860 CTTGGAACCCTCGGTCCGG 62.311 68.421 12.29 0.00 33.12 5.14
5965 6083 2.264794 CTTGGAACCCTCGGTCCG 59.735 66.667 4.39 4.39 33.12 4.79
5966 6084 1.295746 GTCTTGGAACCCTCGGTCC 59.704 63.158 0.00 0.00 33.12 4.46
5967 6085 1.080025 CGTCTTGGAACCCTCGGTC 60.080 63.158 0.00 0.00 33.12 4.79
5968 6086 0.903454 ATCGTCTTGGAACCCTCGGT 60.903 55.000 0.00 0.00 37.65 4.69
5969 6087 0.460284 CATCGTCTTGGAACCCTCGG 60.460 60.000 0.00 0.00 0.00 4.63
5970 6088 1.084370 GCATCGTCTTGGAACCCTCG 61.084 60.000 0.00 0.00 0.00 4.63
5971 6089 0.744771 GGCATCGTCTTGGAACCCTC 60.745 60.000 0.00 0.00 0.00 4.30
5972 6090 1.201429 AGGCATCGTCTTGGAACCCT 61.201 55.000 0.00 0.00 0.00 4.34
5973 6091 0.744771 GAGGCATCGTCTTGGAACCC 60.745 60.000 0.00 0.00 0.00 4.11
5974 6092 0.744771 GGAGGCATCGTCTTGGAACC 60.745 60.000 0.00 0.00 0.00 3.62
5975 6093 0.036388 TGGAGGCATCGTCTTGGAAC 60.036 55.000 0.00 0.00 0.00 3.62
5976 6094 0.690192 TTGGAGGCATCGTCTTGGAA 59.310 50.000 0.00 0.00 0.00 3.53
5977 6095 0.250234 CTTGGAGGCATCGTCTTGGA 59.750 55.000 0.00 0.00 0.00 3.53
5978 6096 0.250234 TCTTGGAGGCATCGTCTTGG 59.750 55.000 0.00 0.00 0.00 3.61
5979 6097 2.005451 CTTCTTGGAGGCATCGTCTTG 58.995 52.381 0.00 0.00 0.00 3.02
5980 6098 1.065854 CCTTCTTGGAGGCATCGTCTT 60.066 52.381 0.00 0.00 38.35 3.01
5981 6099 0.539051 CCTTCTTGGAGGCATCGTCT 59.461 55.000 0.00 0.00 38.35 4.18
5982 6100 0.462759 CCCTTCTTGGAGGCATCGTC 60.463 60.000 0.00 0.00 38.35 4.20
5983 6101 1.604378 CCCTTCTTGGAGGCATCGT 59.396 57.895 0.00 0.00 38.35 3.73
5984 6102 1.821332 GCCCTTCTTGGAGGCATCG 60.821 63.158 0.00 0.00 46.34 3.84
5985 6103 4.249513 GCCCTTCTTGGAGGCATC 57.750 61.111 0.00 0.00 46.34 3.91
5989 6107 1.376037 GTCGTGCCCTTCTTGGAGG 60.376 63.158 0.00 0.00 38.35 4.30
5990 6108 1.376037 GGTCGTGCCCTTCTTGGAG 60.376 63.158 0.00 0.00 38.35 3.86
5991 6109 2.144078 TGGTCGTGCCCTTCTTGGA 61.144 57.895 0.00 0.00 38.35 3.53
5992 6110 1.966451 GTGGTCGTGCCCTTCTTGG 60.966 63.158 0.00 0.00 36.04 3.61
5993 6111 2.317609 CGTGGTCGTGCCCTTCTTG 61.318 63.158 0.00 0.00 36.04 3.02
5994 6112 2.030562 CGTGGTCGTGCCCTTCTT 59.969 61.111 0.00 0.00 36.04 2.52
5995 6113 4.003788 CCGTGGTCGTGCCCTTCT 62.004 66.667 0.00 0.00 36.04 2.85
5996 6114 3.998672 TCCGTGGTCGTGCCCTTC 61.999 66.667 0.00 0.00 36.04 3.46
5997 6115 4.309950 GTCCGTGGTCGTGCCCTT 62.310 66.667 0.00 0.00 36.04 3.95
6011 6129 4.867599 GGACGATGGCGACGGTCC 62.868 72.222 9.81 9.81 41.64 4.46
6014 6132 4.266070 ATCGGACGATGGCGACGG 62.266 66.667 6.39 0.00 41.64 4.79
6015 6133 2.726180 GATCGGACGATGGCGACG 60.726 66.667 12.40 0.00 41.64 5.12
6016 6134 2.354773 GGATCGGACGATGGCGAC 60.355 66.667 12.40 0.00 41.64 5.19
6017 6135 1.950973 TTTGGATCGGACGATGGCGA 61.951 55.000 12.40 0.00 41.64 5.54
6018 6136 1.490693 CTTTGGATCGGACGATGGCG 61.491 60.000 12.40 0.00 44.79 5.69
6019 6137 0.179084 TCTTTGGATCGGACGATGGC 60.179 55.000 12.40 0.00 34.60 4.40
6020 6138 2.408050 GATCTTTGGATCGGACGATGG 58.592 52.381 12.40 0.00 38.91 3.51
6029 6147 4.158579 GGGTGAAAACCTGATCTTTGGATC 59.841 45.833 6.91 0.00 46.20 3.36
6030 6148 4.089361 GGGTGAAAACCTGATCTTTGGAT 58.911 43.478 6.91 0.00 34.45 3.41
6031 6149 3.496331 GGGTGAAAACCTGATCTTTGGA 58.504 45.455 6.91 0.00 0.00 3.53
6032 6150 2.228822 CGGGTGAAAACCTGATCTTTGG 59.771 50.000 0.00 0.00 38.41 3.28
6033 6151 2.228822 CCGGGTGAAAACCTGATCTTTG 59.771 50.000 5.26 0.00 38.41 2.77
6034 6152 2.107552 TCCGGGTGAAAACCTGATCTTT 59.892 45.455 0.00 0.00 38.41 2.52
6035 6153 1.702957 TCCGGGTGAAAACCTGATCTT 59.297 47.619 0.00 0.00 38.41 2.40
6036 6154 1.358152 TCCGGGTGAAAACCTGATCT 58.642 50.000 0.00 0.00 38.41 2.75
6037 6155 1.810755 GTTCCGGGTGAAAACCTGATC 59.189 52.381 0.00 0.00 38.41 2.92
6038 6156 1.144093 TGTTCCGGGTGAAAACCTGAT 59.856 47.619 0.00 0.00 38.41 2.90
6039 6157 0.547075 TGTTCCGGGTGAAAACCTGA 59.453 50.000 0.00 0.00 38.41 3.86
6040 6158 0.666374 GTGTTCCGGGTGAAAACCTG 59.334 55.000 0.00 0.00 35.47 4.00
6041 6159 0.816421 CGTGTTCCGGGTGAAAACCT 60.816 55.000 0.00 0.00 37.85 3.50
6042 6160 0.814812 TCGTGTTCCGGGTGAAAACC 60.815 55.000 0.00 0.00 37.85 3.27
6043 6161 0.305617 GTCGTGTTCCGGGTGAAAAC 59.694 55.000 0.00 0.00 37.77 2.43
6044 6162 1.152989 CGTCGTGTTCCGGGTGAAAA 61.153 55.000 0.00 0.00 33.94 2.29
6045 6163 1.592131 CGTCGTGTTCCGGGTGAAA 60.592 57.895 0.00 0.00 33.94 2.69
6046 6164 2.027897 CGTCGTGTTCCGGGTGAA 59.972 61.111 0.00 0.00 37.11 3.18
6047 6165 3.980989 CCGTCGTGTTCCGGGTGA 61.981 66.667 0.00 0.00 40.54 4.02
6051 6169 4.430765 CCTCCCGTCGTGTTCCGG 62.431 72.222 0.00 0.00 43.82 5.14
6052 6170 3.338126 CTCCTCCCGTCGTGTTCCG 62.338 68.421 0.00 0.00 38.13 4.30
6053 6171 2.273912 ACTCCTCCCGTCGTGTTCC 61.274 63.158 0.00 0.00 0.00 3.62
6054 6172 1.080705 CACTCCTCCCGTCGTGTTC 60.081 63.158 0.00 0.00 0.00 3.18
6055 6173 1.524863 CTCACTCCTCCCGTCGTGTT 61.525 60.000 0.00 0.00 0.00 3.32
6056 6174 1.972223 CTCACTCCTCCCGTCGTGT 60.972 63.158 0.00 0.00 0.00 4.49
6057 6175 1.649390 CTCTCACTCCTCCCGTCGTG 61.649 65.000 0.00 0.00 0.00 4.35
6058 6176 1.377463 CTCTCACTCCTCCCGTCGT 60.377 63.158 0.00 0.00 0.00 4.34
6059 6177 2.766400 GCTCTCACTCCTCCCGTCG 61.766 68.421 0.00 0.00 0.00 5.12
6060 6178 1.679305 TGCTCTCACTCCTCCCGTC 60.679 63.158 0.00 0.00 0.00 4.79
6061 6179 1.979693 GTGCTCTCACTCCTCCCGT 60.980 63.158 0.00 0.00 40.03 5.28
6062 6180 2.716017 GGTGCTCTCACTCCTCCCG 61.716 68.421 0.00 0.00 42.72 5.14
6063 6181 1.610673 TGGTGCTCTCACTCCTCCC 60.611 63.158 0.00 0.00 42.72 4.30
6064 6182 1.594310 GTGGTGCTCTCACTCCTCC 59.406 63.158 0.00 0.00 42.72 4.30
6065 6183 1.214062 CGTGGTGCTCTCACTCCTC 59.786 63.158 6.05 0.00 42.72 3.71
6066 6184 1.228583 TCGTGGTGCTCTCACTCCT 60.229 57.895 6.05 0.00 42.72 3.69
6067 6185 1.080434 GTCGTGGTGCTCTCACTCC 60.080 63.158 6.05 0.00 42.72 3.85
6068 6186 1.442857 CGTCGTGGTGCTCTCACTC 60.443 63.158 6.05 0.68 42.72 3.51
6069 6187 2.645567 CGTCGTGGTGCTCTCACT 59.354 61.111 6.05 0.00 42.72 3.41
6070 6188 2.430921 CCGTCGTGGTGCTCTCAC 60.431 66.667 0.00 0.00 42.40 3.51
6071 6189 2.596338 TCCGTCGTGGTGCTCTCA 60.596 61.111 0.00 0.00 39.52 3.27
6072 6190 2.179517 CTCCGTCGTGGTGCTCTC 59.820 66.667 0.00 0.00 39.52 3.20
6077 6195 2.181021 GTAGGCTCCGTCGTGGTG 59.819 66.667 0.00 0.00 39.52 4.17
6078 6196 2.282674 TGTAGGCTCCGTCGTGGT 60.283 61.111 0.00 0.00 39.52 4.16
6079 6197 2.490217 CTGTAGGCTCCGTCGTGG 59.510 66.667 0.00 0.00 40.09 4.94
6080 6198 2.490217 CCTGTAGGCTCCGTCGTG 59.510 66.667 0.00 0.00 0.00 4.35
6081 6199 2.754658 CCCTGTAGGCTCCGTCGT 60.755 66.667 0.00 0.00 0.00 4.34
6082 6200 2.439701 TCCCTGTAGGCTCCGTCG 60.440 66.667 0.00 0.00 34.51 5.12
6083 6201 2.128507 CCTCCCTGTAGGCTCCGTC 61.129 68.421 0.00 0.00 34.51 4.79
6084 6202 2.042843 CCTCCCTGTAGGCTCCGT 60.043 66.667 0.00 0.00 34.51 4.69
6085 6203 1.381327 TTCCTCCCTGTAGGCTCCG 60.381 63.158 0.00 0.00 36.51 4.63
6086 6204 0.617820 TGTTCCTCCCTGTAGGCTCC 60.618 60.000 0.00 0.00 36.51 4.70
6087 6205 0.537653 GTGTTCCTCCCTGTAGGCTC 59.462 60.000 0.00 0.00 36.51 4.70
6088 6206 1.258445 CGTGTTCCTCCCTGTAGGCT 61.258 60.000 0.00 0.00 36.51 4.58
6089 6207 1.218316 CGTGTTCCTCCCTGTAGGC 59.782 63.158 0.00 0.00 36.51 3.93
6090 6208 0.531200 GTCGTGTTCCTCCCTGTAGG 59.469 60.000 0.00 0.00 38.06 3.18
6091 6209 1.254026 TGTCGTGTTCCTCCCTGTAG 58.746 55.000 0.00 0.00 0.00 2.74
6092 6210 1.822990 GATGTCGTGTTCCTCCCTGTA 59.177 52.381 0.00 0.00 0.00 2.74
6093 6211 0.608640 GATGTCGTGTTCCTCCCTGT 59.391 55.000 0.00 0.00 0.00 4.00
6094 6212 0.108138 GGATGTCGTGTTCCTCCCTG 60.108 60.000 0.00 0.00 0.00 4.45
6095 6213 1.605058 CGGATGTCGTGTTCCTCCCT 61.605 60.000 0.00 0.00 0.00 4.20
6096 6214 1.153628 CGGATGTCGTGTTCCTCCC 60.154 63.158 0.00 0.00 0.00 4.30
6097 6215 1.810030 GCGGATGTCGTGTTCCTCC 60.810 63.158 0.00 0.00 41.72 4.30
6098 6216 2.158959 CGCGGATGTCGTGTTCCTC 61.159 63.158 0.00 0.00 43.65 3.71
6099 6217 2.126071 CGCGGATGTCGTGTTCCT 60.126 61.111 0.00 0.00 43.65 3.36
6100 6218 3.186047 CCGCGGATGTCGTGTTCC 61.186 66.667 24.07 0.00 46.86 3.62
6101 6219 2.126228 TCCGCGGATGTCGTGTTC 60.126 61.111 27.28 0.00 46.86 3.18
6102 6220 2.431942 GTCCGCGGATGTCGTGTT 60.432 61.111 33.58 0.00 46.86 3.32
6103 6221 4.771356 CGTCCGCGGATGTCGTGT 62.771 66.667 34.37 0.00 46.86 4.49
6126 6244 3.726517 CGTACACGGGTCGACGGT 61.727 66.667 9.92 7.29 38.39 4.83
6136 6254 1.536766 TCACTTACCTGTCCGTACACG 59.463 52.381 0.00 0.00 39.44 4.49
6137 6255 3.192001 TCATCACTTACCTGTCCGTACAC 59.808 47.826 0.00 0.00 0.00 2.90
6138 6256 3.423749 TCATCACTTACCTGTCCGTACA 58.576 45.455 0.00 0.00 0.00 2.90
6139 6257 4.171754 GTTCATCACTTACCTGTCCGTAC 58.828 47.826 0.00 0.00 0.00 3.67
6140 6258 3.194116 GGTTCATCACTTACCTGTCCGTA 59.806 47.826 0.00 0.00 0.00 4.02
6141 6259 2.028385 GGTTCATCACTTACCTGTCCGT 60.028 50.000 0.00 0.00 0.00 4.69
6142 6260 2.618053 GGTTCATCACTTACCTGTCCG 58.382 52.381 0.00 0.00 0.00 4.79
6143 6261 2.355818 GGGGTTCATCACTTACCTGTCC 60.356 54.545 0.00 0.00 32.46 4.02
6144 6262 2.677037 CGGGGTTCATCACTTACCTGTC 60.677 54.545 0.00 0.00 32.46 3.51
6145 6263 1.278127 CGGGGTTCATCACTTACCTGT 59.722 52.381 0.00 0.00 32.46 4.00
6146 6264 1.406887 CCGGGGTTCATCACTTACCTG 60.407 57.143 0.00 0.00 32.46 4.00
6147 6265 0.909623 CCGGGGTTCATCACTTACCT 59.090 55.000 0.00 0.00 32.46 3.08
6148 6266 0.616891 ACCGGGGTTCATCACTTACC 59.383 55.000 6.32 0.00 0.00 2.85
6149 6267 1.734163 CACCGGGGTTCATCACTTAC 58.266 55.000 6.32 0.00 0.00 2.34
6150 6268 0.035820 GCACCGGGGTTCATCACTTA 60.036 55.000 5.12 0.00 0.00 2.24
6151 6269 1.303317 GCACCGGGGTTCATCACTT 60.303 57.895 5.12 0.00 0.00 3.16
6152 6270 2.185310 GAGCACCGGGGTTCATCACT 62.185 60.000 16.65 0.00 0.00 3.41
6153 6271 1.745489 GAGCACCGGGGTTCATCAC 60.745 63.158 16.65 0.00 0.00 3.06
6154 6272 2.668632 GAGCACCGGGGTTCATCA 59.331 61.111 16.65 0.00 0.00 3.07
6155 6273 2.124695 GGAGCACCGGGGTTCATC 60.125 66.667 22.95 7.32 0.00 2.92
6156 6274 2.933287 TGGAGCACCGGGGTTCAT 60.933 61.111 22.95 0.00 39.42 2.57
6157 6275 3.948719 GTGGAGCACCGGGGTTCA 61.949 66.667 22.95 10.80 39.42 3.18
6158 6276 4.717313 GGTGGAGCACCGGGGTTC 62.717 72.222 12.91 12.91 44.95 3.62
6166 6284 4.021925 AGCGGAAGGGTGGAGCAC 62.022 66.667 0.00 0.00 0.00 4.40
6167 6285 4.020617 CAGCGGAAGGGTGGAGCA 62.021 66.667 0.00 0.00 40.47 4.26
6169 6287 4.020617 TGCAGCGGAAGGGTGGAG 62.021 66.667 0.00 0.00 44.32 3.86
6171 6289 2.825836 GATGCAGCGGAAGGGTGG 60.826 66.667 0.00 0.00 44.32 4.61
6172 6290 2.825836 GGATGCAGCGGAAGGGTG 60.826 66.667 0.00 0.00 46.88 4.61
6173 6291 4.115199 GGGATGCAGCGGAAGGGT 62.115 66.667 0.00 0.00 0.00 4.34
6174 6292 4.883354 GGGGATGCAGCGGAAGGG 62.883 72.222 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.