Multiple sequence alignment - TraesCS5B01G093500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G093500 chr5B 100.000 6013 0 0 1 6013 122828389 122834401 0.000000e+00 11105.0
1 TraesCS5B01G093500 chr5B 84.245 1371 216 0 2970 4340 34720239 34721609 0.000000e+00 1336.0
2 TraesCS5B01G093500 chr5B 88.525 793 86 5 762 1549 34718789 34719581 0.000000e+00 955.0
3 TraesCS5B01G093500 chr5B 98.198 444 6 2 1552 1994 122844573 122844131 0.000000e+00 774.0
4 TraesCS5B01G093500 chr5B 81.849 595 108 0 4404 4998 34721646 34722240 9.000000e-138 501.0
5 TraesCS5B01G093500 chr5B 73.256 946 233 14 3118 4050 122437540 122436602 1.620000e-85 327.0
6 TraesCS5B01G093500 chr5B 84.615 299 44 1 1992 2288 34719568 34719866 4.560000e-76 296.0
7 TraesCS5B01G093500 chr5B 85.714 56 5 2 5563 5617 522324743 522324796 8.420000e-04 56.5
8 TraesCS5B01G093500 chr5D 96.788 2989 66 7 1992 4960 109944910 109941932 0.000000e+00 4961.0
9 TraesCS5B01G093500 chr5D 93.554 1179 66 7 377 1549 109946071 109944897 0.000000e+00 1748.0
10 TraesCS5B01G093500 chr5D 94.281 612 18 6 5404 6013 109940293 109939697 0.000000e+00 920.0
11 TraesCS5B01G093500 chr5D 74.421 1208 281 20 3058 4248 110367344 110368540 1.510000e-135 494.0
12 TraesCS5B01G093500 chr5D 75.616 730 166 10 2989 3712 110348844 110349567 9.590000e-93 351.0
13 TraesCS5B01G093500 chr5D 93.506 154 6 1 4946 5095 109941919 109941766 6.060000e-55 226.0
14 TraesCS5B01G093500 chr5D 97.692 130 3 0 5082 5211 109940591 109940462 2.180000e-54 224.0
15 TraesCS5B01G093500 chr5D 85.714 56 5 3 5563 5617 433727682 433727629 8.420000e-04 56.5
16 TraesCS5B01G093500 chr5D 85.714 56 5 3 5563 5617 513168987 513169040 8.420000e-04 56.5
17 TraesCS5B01G093500 chr5D 85.714 56 5 3 5563 5617 513249486 513249539 8.420000e-04 56.5
18 TraesCS5B01G093500 chr5A 97.379 2213 51 4 3448 5658 117388437 117390644 0.000000e+00 3759.0
19 TraesCS5B01G093500 chr5A 94.633 1267 60 5 287 1549 117379112 117380374 0.000000e+00 1956.0
20 TraesCS5B01G093500 chr5A 96.863 1084 26 2 2325 3402 117387349 117388430 0.000000e+00 1807.0
21 TraesCS5B01G093500 chr5A 95.870 339 12 2 5677 6013 117394586 117394924 1.140000e-151 547.0
22 TraesCS5B01G093500 chr5A 98.339 301 5 0 1992 2292 117380361 117380661 4.130000e-146 529.0
23 TraesCS5B01G093500 chr5A 74.274 1205 288 16 3058 4248 116586240 116585044 7.000000e-134 488.0
24 TraesCS5B01G093500 chr5A 86.513 304 20 11 1 287 117378768 117379067 1.260000e-81 315.0
25 TraesCS5B01G093500 chr5A 95.312 128 6 0 5551 5678 117390637 117390764 2.840000e-48 204.0
26 TraesCS5B01G093500 chr5A 85.246 61 9 0 1095 1155 578023057 578023117 5.030000e-06 63.9
27 TraesCS5B01G093500 chr3B 83.357 1388 223 7 2970 4353 779546962 779545579 0.000000e+00 1277.0
28 TraesCS5B01G093500 chr3B 82.120 1387 238 10 2970 4353 725096738 725098117 0.000000e+00 1179.0
29 TraesCS5B01G093500 chr3B 91.185 726 48 8 831 1549 779548399 779547683 0.000000e+00 972.0
30 TraesCS5B01G093500 chr3B 98.210 447 7 1 1549 1994 84891889 84892335 0.000000e+00 780.0
31 TraesCS5B01G093500 chr3B 97.991 448 8 1 1549 1995 4257829 4258276 0.000000e+00 776.0
32 TraesCS5B01G093500 chr3B 91.731 387 32 0 1160 1546 725095629 725096015 6.860000e-149 538.0
33 TraesCS5B01G093500 chr3B 93.981 216 11 2 950 1164 725036658 725036872 5.810000e-85 326.0
34 TraesCS5B01G093500 chr3D 82.997 1388 228 7 2970 4353 582017419 582018802 0.000000e+00 1249.0
35 TraesCS5B01G093500 chr3D 91.516 719 52 6 831 1546 582015984 582016696 0.000000e+00 981.0
36 TraesCS5B01G093500 chr3D 85.765 281 38 2 1992 2271 582016686 582016965 4.560000e-76 296.0
37 TraesCS5B01G093500 chr3D 91.026 78 7 0 296 373 111901834 111901757 8.240000e-19 106.0
38 TraesCS5B01G093500 chr2B 98.652 445 5 1 1552 1995 556431319 556430875 0.000000e+00 787.0
39 TraesCS5B01G093500 chr4B 98.423 444 6 1 1552 1994 347550291 347549848 0.000000e+00 780.0
40 TraesCS5B01G093500 chr4B 85.714 56 5 3 5563 5617 341886626 341886679 8.420000e-04 56.5
41 TraesCS5B01G093500 chr4A 98.423 444 6 1 1549 1991 603752019 603752462 0.000000e+00 780.0
42 TraesCS5B01G093500 chr4A 85.714 56 5 3 5563 5617 333269131 333269184 8.420000e-04 56.5
43 TraesCS5B01G093500 chr7B 98.202 445 7 1 1552 1995 511906376 511905932 0.000000e+00 776.0
44 TraesCS5B01G093500 chr7B 98.416 442 4 2 1549 1989 386242996 386243435 0.000000e+00 774.0
45 TraesCS5B01G093500 chr7B 97.768 448 8 2 1549 1995 676972942 676973388 0.000000e+00 771.0
46 TraesCS5B01G093500 chr2D 96.154 52 2 0 322 373 6654194 6654143 1.070000e-12 86.1
47 TraesCS5B01G093500 chr2A 96.154 52 2 0 322 373 4958998 4958947 1.070000e-12 86.1
48 TraesCS5B01G093500 chr2A 85.965 57 5 3 5563 5618 177447237 177447291 2.340000e-04 58.4
49 TraesCS5B01G093500 chr6A 85.897 78 11 0 290 367 105202151 105202074 3.860000e-12 84.2
50 TraesCS5B01G093500 chr6D 83.562 73 12 0 295 367 87316022 87315950 1.080000e-07 69.4
51 TraesCS5B01G093500 chr1B 87.037 54 4 3 5563 5615 314549129 314549180 2.340000e-04 58.4
52 TraesCS5B01G093500 chr7D 85.714 56 5 3 5563 5617 578633224 578633277 8.420000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G093500 chr5B 122828389 122834401 6012 False 11105.000000 11105 100.000000 1 6013 1 chr5B.!!$F1 6012
1 TraesCS5B01G093500 chr5B 34718789 34722240 3451 False 772.000000 1336 84.808500 762 4998 4 chr5B.!!$F3 4236
2 TraesCS5B01G093500 chr5B 122436602 122437540 938 True 327.000000 327 73.256000 3118 4050 1 chr5B.!!$R1 932
3 TraesCS5B01G093500 chr5D 109939697 109946071 6374 True 1615.800000 4961 95.164200 377 6013 5 chr5D.!!$R2 5636
4 TraesCS5B01G093500 chr5D 110367344 110368540 1196 False 494.000000 494 74.421000 3058 4248 1 chr5D.!!$F2 1190
5 TraesCS5B01G093500 chr5D 110348844 110349567 723 False 351.000000 351 75.616000 2989 3712 1 chr5D.!!$F1 723
6 TraesCS5B01G093500 chr5A 117387349 117394924 7575 False 1579.250000 3759 96.356000 2325 6013 4 chr5A.!!$F3 3688
7 TraesCS5B01G093500 chr5A 117378768 117380661 1893 False 933.333333 1956 93.161667 1 2292 3 chr5A.!!$F2 2291
8 TraesCS5B01G093500 chr5A 116585044 116586240 1196 True 488.000000 488 74.274000 3058 4248 1 chr5A.!!$R1 1190
9 TraesCS5B01G093500 chr3B 779545579 779548399 2820 True 1124.500000 1277 87.271000 831 4353 2 chr3B.!!$R1 3522
10 TraesCS5B01G093500 chr3B 725095629 725098117 2488 False 858.500000 1179 86.925500 1160 4353 2 chr3B.!!$F4 3193
11 TraesCS5B01G093500 chr3D 582015984 582018802 2818 False 842.000000 1249 86.759333 831 4353 3 chr3D.!!$F1 3522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 286 1.807142 GATCCTTATTTGCTAGCGGGC 59.193 52.381 10.77 0.0 0.00 6.13 F
1546 1623 0.106519 CAAGTGCCTAATGGAGGGGG 60.107 60.000 0.00 0.0 46.81 5.40 F
1627 1704 0.035820 GCACCGGGGTTCATCACTTA 60.036 55.000 5.12 0.0 0.00 2.24 F
1802 1879 0.036388 TGGAGGCATCGTCTTGGAAC 60.036 55.000 0.00 0.0 0.00 3.62 F
1842 1919 0.181587 TTGCACTTCTTCCCGGACAA 59.818 50.000 0.73 0.0 0.00 3.18 F
1899 1976 0.388520 GTGCCCGGCATTCTTGTTTC 60.389 55.000 16.96 0.0 41.91 2.78 F
1931 2008 0.452122 GTGTGGCGTGCGTTTGTATC 60.452 55.000 0.00 0.0 0.00 2.24 F
3831 4005 0.247460 TCATTGCCGGTCTCTCAGTG 59.753 55.000 1.90 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1608 1685 0.035820 TAAGTGATGAACCCCGGTGC 60.036 55.000 0.0 0.00 0.00 5.01 R
2494 2619 1.963515 CCCCTGAAACCAAAACCAGAG 59.036 52.381 0.0 0.00 0.00 3.35 R
2656 2824 2.564947 AGAACGTGAGCTTCAGGAATCT 59.435 45.455 11.2 10.57 35.94 2.40 R
2776 2944 6.351286 GCACCCTTTATTTCCTCAATGAACAT 60.351 38.462 0.0 0.00 0.00 2.71 R
3824 3998 4.469586 TCAGCATACCCAAATACACTGAGA 59.530 41.667 0.0 0.00 0.00 3.27 R
3831 4005 5.506317 GCATCTGTTCAGCATACCCAAATAC 60.506 44.000 0.0 0.00 0.00 1.89 R
3998 4178 4.467795 TGCTGTAGTTCTCCTAATTGCTCT 59.532 41.667 0.0 0.00 0.00 4.09 R
5868 11194 0.106819 CTGATTGCCTGGAGGAAGGG 60.107 60.000 0.0 0.00 37.84 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 44 6.544564 TCATAGTTGACATGTTCATGATGCAT 59.455 34.615 17.96 0.00 32.84 3.96
43 45 7.716123 TCATAGTTGACATGTTCATGATGCATA 59.284 33.333 17.96 6.91 32.84 3.14
44 46 6.127810 AGTTGACATGTTCATGATGCATAC 57.872 37.500 17.96 0.00 32.84 2.39
51 53 6.261603 ACATGTTCATGATGCATACTACTTGG 59.738 38.462 17.96 2.63 0.00 3.61
54 56 6.761242 TGTTCATGATGCATACTACTTGGTAC 59.239 38.462 0.00 0.00 0.00 3.34
62 64 4.038402 GCATACTACTTGGTACGGGTATGT 59.962 45.833 0.00 8.24 38.85 2.29
71 73 3.075884 GGTACGGGTATGTTTGCTTTGA 58.924 45.455 0.00 0.00 0.00 2.69
73 75 4.023021 GGTACGGGTATGTTTGCTTTGAAA 60.023 41.667 0.00 0.00 0.00 2.69
94 96 8.266392 TGAAAAATTTGACAAGTTCTGCATTT 57.734 26.923 0.00 0.00 0.00 2.32
105 107 5.841957 AGTTCTGCATTTCACTGTTCTTT 57.158 34.783 0.00 0.00 0.00 2.52
121 123 6.497259 ACTGTTCTTTAACCCTCTGATGACTA 59.503 38.462 0.00 0.00 34.49 2.59
124 126 9.213777 TGTTCTTTAACCCTCTGATGACTATAT 57.786 33.333 0.00 0.00 34.49 0.86
125 127 9.699703 GTTCTTTAACCCTCTGATGACTATATC 57.300 37.037 0.00 0.00 0.00 1.63
126 128 8.112016 TCTTTAACCCTCTGATGACTATATCG 57.888 38.462 0.00 0.00 0.00 2.92
127 129 4.792521 AACCCTCTGATGACTATATCGC 57.207 45.455 0.00 0.00 0.00 4.58
128 130 4.040936 ACCCTCTGATGACTATATCGCT 57.959 45.455 0.00 0.00 0.00 4.93
129 131 5.180810 ACCCTCTGATGACTATATCGCTA 57.819 43.478 0.00 0.00 0.00 4.26
130 132 5.189928 ACCCTCTGATGACTATATCGCTAG 58.810 45.833 0.00 0.00 0.00 3.42
132 134 5.295787 CCCTCTGATGACTATATCGCTAGTC 59.704 48.000 10.78 10.78 45.18 2.59
199 209 5.538433 AGAAAGCACAATTTTTGCCCTACTA 59.462 36.000 3.97 0.00 41.18 1.82
243 261 6.640137 CACAACTTATGTATATGCAGACACG 58.360 40.000 0.00 0.00 41.46 4.49
252 270 2.015736 ATGCAGACACGAACTGATCC 57.984 50.000 10.99 0.00 37.54 3.36
264 282 4.811557 ACGAACTGATCCTTATTTGCTAGC 59.188 41.667 8.10 8.10 0.00 3.42
268 286 1.807142 GATCCTTATTTGCTAGCGGGC 59.193 52.381 10.77 0.00 0.00 6.13
287 305 3.877508 GGGCTACAACTAAATACTGGCTG 59.122 47.826 0.00 0.00 0.00 4.85
320 383 3.479269 CGAACGTTCGCTGGGAGC 61.479 66.667 34.54 2.69 44.26 4.70
372 435 3.427573 AGTTTAGTTGTATGGGGTTGGC 58.572 45.455 0.00 0.00 0.00 4.52
423 486 6.808212 GCTCTACAATTTGTTGTATTGTGCAT 59.192 34.615 7.45 0.00 43.85 3.96
484 547 3.793797 TCATGCGACTCGATTCCTAAA 57.206 42.857 1.63 0.00 0.00 1.85
606 670 8.217111 TCTGGTACAATTGGATAAATAGCATGA 58.783 33.333 10.83 5.06 38.70 3.07
687 751 7.907045 CAGTTATTATGTCATTTGCAGAGTGAC 59.093 37.037 16.62 16.62 41.90 3.67
756 821 4.097892 ACTGTGACATTGAGTGGTTTTTCC 59.902 41.667 0.00 0.00 0.00 3.13
826 891 5.398603 TGTGTATTTAGGTTGGCAATTGG 57.601 39.130 1.92 0.00 0.00 3.16
860 925 7.823149 AGTTACGATTGTAGTTATGGTTGTC 57.177 36.000 0.00 0.00 0.00 3.18
899 970 5.654901 ACAGACCTACCTCTCTGATGATA 57.345 43.478 1.74 0.00 37.85 2.15
1224 1301 3.850752 AGTCCGGGAGATGTCTTATGAT 58.149 45.455 0.00 0.00 0.00 2.45
1301 1378 0.185901 AGAGCAGGGCTTGTCCAAAA 59.814 50.000 0.00 0.00 39.88 2.44
1331 1408 2.045536 GCTCAAGGCACTGAGGGG 60.046 66.667 15.75 0.00 40.86 4.79
1538 1615 2.169352 ACGAGCTCATCAAGTGCCTAAT 59.831 45.455 15.40 0.00 37.44 1.73
1539 1616 2.543012 CGAGCTCATCAAGTGCCTAATG 59.457 50.000 15.40 0.00 37.44 1.90
1540 1617 2.877168 GAGCTCATCAAGTGCCTAATGG 59.123 50.000 9.40 0.00 37.44 3.16
1541 1618 2.507058 AGCTCATCAAGTGCCTAATGGA 59.493 45.455 0.00 0.00 37.44 3.41
1542 1619 2.877168 GCTCATCAAGTGCCTAATGGAG 59.123 50.000 0.00 0.00 34.57 3.86
1544 1621 2.173356 TCATCAAGTGCCTAATGGAGGG 59.827 50.000 0.00 0.00 46.81 4.30
1545 1622 0.918983 TCAAGTGCCTAATGGAGGGG 59.081 55.000 0.00 0.00 46.81 4.79
1546 1623 0.106519 CAAGTGCCTAATGGAGGGGG 60.107 60.000 0.00 0.00 46.81 5.40
1547 1624 0.552615 AAGTGCCTAATGGAGGGGGT 60.553 55.000 0.00 0.00 46.81 4.95
1548 1625 1.227383 GTGCCTAATGGAGGGGGTG 59.773 63.158 0.00 0.00 46.81 4.61
1549 1626 2.195956 GCCTAATGGAGGGGGTGC 59.804 66.667 0.00 0.00 46.81 5.01
1550 1627 2.689691 GCCTAATGGAGGGGGTGCA 61.690 63.158 0.00 0.00 46.81 4.57
1551 1628 1.533711 CCTAATGGAGGGGGTGCAG 59.466 63.158 0.00 0.00 42.39 4.41
1552 1629 1.152881 CTAATGGAGGGGGTGCAGC 60.153 63.158 7.55 7.55 0.00 5.25
1553 1630 1.619363 TAATGGAGGGGGTGCAGCT 60.619 57.895 16.65 0.00 0.00 4.24
1554 1631 1.214305 TAATGGAGGGGGTGCAGCTT 61.214 55.000 16.65 2.65 0.00 3.74
1555 1632 2.793317 AATGGAGGGGGTGCAGCTTG 62.793 60.000 16.65 0.00 0.00 4.01
1556 1633 4.748144 GGAGGGGGTGCAGCTTGG 62.748 72.222 16.65 0.00 0.00 3.61
1557 1634 4.748144 GAGGGGGTGCAGCTTGGG 62.748 72.222 16.65 0.00 0.00 4.12
1563 1640 2.993264 GTGCAGCTTGGGTGGCAT 60.993 61.111 0.00 0.00 0.00 4.40
1564 1641 2.992689 TGCAGCTTGGGTGGCATG 60.993 61.111 0.00 0.00 0.00 4.06
1565 1642 3.766691 GCAGCTTGGGTGGCATGG 61.767 66.667 0.00 0.00 0.00 3.66
1566 1643 2.283388 CAGCTTGGGTGGCATGGT 60.283 61.111 0.00 0.00 0.00 3.55
1567 1644 1.909781 CAGCTTGGGTGGCATGGTT 60.910 57.895 0.00 0.00 0.00 3.67
1568 1645 1.909781 AGCTTGGGTGGCATGGTTG 60.910 57.895 0.00 0.00 0.00 3.77
1579 1656 1.667151 CATGGTTGCAGGTGGTTGG 59.333 57.895 0.00 0.00 0.00 3.77
1580 1657 2.209315 ATGGTTGCAGGTGGTTGGC 61.209 57.895 0.00 0.00 0.00 4.52
1581 1658 3.615709 GGTTGCAGGTGGTTGGCC 61.616 66.667 0.00 0.00 0.00 5.36
1582 1659 3.977244 GTTGCAGGTGGTTGGCCG 61.977 66.667 0.00 0.00 37.67 6.13
1583 1660 4.196778 TTGCAGGTGGTTGGCCGA 62.197 61.111 0.00 0.00 37.67 5.54
1584 1661 4.947147 TGCAGGTGGTTGGCCGAC 62.947 66.667 15.51 15.51 37.67 4.79
1601 1678 4.609018 CCGGGGATGCAGCGGTAG 62.609 72.222 0.00 0.00 0.00 3.18
1602 1679 4.609018 CGGGGATGCAGCGGTAGG 62.609 72.222 0.00 0.00 0.00 3.18
1603 1680 4.256180 GGGGATGCAGCGGTAGGG 62.256 72.222 0.00 0.00 0.00 3.53
1604 1681 3.480133 GGGATGCAGCGGTAGGGT 61.480 66.667 0.00 0.00 0.00 4.34
1605 1682 2.203070 GGATGCAGCGGTAGGGTG 60.203 66.667 0.00 0.00 46.88 4.61
1606 1683 2.203070 GATGCAGCGGTAGGGTGG 60.203 66.667 0.00 0.00 44.32 4.61
1608 1685 3.390521 TGCAGCGGTAGGGTGGAG 61.391 66.667 0.00 0.00 44.32 3.86
1609 1686 4.840005 GCAGCGGTAGGGTGGAGC 62.840 72.222 0.00 0.00 44.32 4.70
1610 1687 3.390521 CAGCGGTAGGGTGGAGCA 61.391 66.667 0.00 0.00 40.47 4.26
1611 1688 3.391382 AGCGGTAGGGTGGAGCAC 61.391 66.667 0.00 0.00 0.00 4.40
1619 1696 4.717313 GGTGGAGCACCGGGGTTC 62.717 72.222 12.91 12.91 44.95 3.62
1620 1697 3.948719 GTGGAGCACCGGGGTTCA 61.949 66.667 22.95 10.80 39.42 3.18
1621 1698 2.933287 TGGAGCACCGGGGTTCAT 60.933 61.111 22.95 0.00 39.42 2.57
1622 1699 2.124695 GGAGCACCGGGGTTCATC 60.125 66.667 22.95 7.32 0.00 2.92
1623 1700 2.668632 GAGCACCGGGGTTCATCA 59.331 61.111 16.65 0.00 0.00 3.07
1624 1701 1.745489 GAGCACCGGGGTTCATCAC 60.745 63.158 16.65 0.00 0.00 3.06
1625 1702 2.185310 GAGCACCGGGGTTCATCACT 62.185 60.000 16.65 0.00 0.00 3.41
1626 1703 1.303317 GCACCGGGGTTCATCACTT 60.303 57.895 5.12 0.00 0.00 3.16
1627 1704 0.035820 GCACCGGGGTTCATCACTTA 60.036 55.000 5.12 0.00 0.00 2.24
1628 1705 1.734163 CACCGGGGTTCATCACTTAC 58.266 55.000 6.32 0.00 0.00 2.34
1629 1706 0.616891 ACCGGGGTTCATCACTTACC 59.383 55.000 6.32 0.00 0.00 2.85
1630 1707 0.909623 CCGGGGTTCATCACTTACCT 59.090 55.000 0.00 0.00 32.46 3.08
1631 1708 1.406887 CCGGGGTTCATCACTTACCTG 60.407 57.143 0.00 0.00 32.46 4.00
1632 1709 1.278127 CGGGGTTCATCACTTACCTGT 59.722 52.381 0.00 0.00 32.46 4.00
1633 1710 2.677037 CGGGGTTCATCACTTACCTGTC 60.677 54.545 0.00 0.00 32.46 3.51
1634 1711 2.355818 GGGGTTCATCACTTACCTGTCC 60.356 54.545 0.00 0.00 32.46 4.02
1635 1712 2.618053 GGTTCATCACTTACCTGTCCG 58.382 52.381 0.00 0.00 0.00 4.79
1636 1713 2.028385 GGTTCATCACTTACCTGTCCGT 60.028 50.000 0.00 0.00 0.00 4.69
1637 1714 3.194116 GGTTCATCACTTACCTGTCCGTA 59.806 47.826 0.00 0.00 0.00 4.02
1638 1715 4.171754 GTTCATCACTTACCTGTCCGTAC 58.828 47.826 0.00 0.00 0.00 3.67
1639 1716 3.423749 TCATCACTTACCTGTCCGTACA 58.576 45.455 0.00 0.00 0.00 2.90
1640 1717 3.192001 TCATCACTTACCTGTCCGTACAC 59.808 47.826 0.00 0.00 0.00 2.90
1641 1718 1.536766 TCACTTACCTGTCCGTACACG 59.463 52.381 0.00 0.00 39.44 4.49
1651 1728 3.726517 CGTACACGGGTCGACGGT 61.727 66.667 9.92 7.29 38.39 4.83
1672 1749 4.430765 GGCGTCCGTGGATGTCGT 62.431 66.667 9.73 0.00 33.91 4.34
1673 1750 3.179265 GCGTCCGTGGATGTCGTG 61.179 66.667 9.73 0.00 33.91 4.35
1674 1751 2.257371 CGTCCGTGGATGTCGTGT 59.743 61.111 0.00 0.00 0.00 4.49
1675 1752 1.372499 CGTCCGTGGATGTCGTGTT 60.372 57.895 0.00 0.00 0.00 3.32
1676 1753 1.342082 CGTCCGTGGATGTCGTGTTC 61.342 60.000 0.00 0.00 0.00 3.18
1677 1754 1.012486 GTCCGTGGATGTCGTGTTCC 61.012 60.000 0.00 0.00 0.00 3.62
1678 1755 1.183030 TCCGTGGATGTCGTGTTCCT 61.183 55.000 0.00 0.00 32.95 3.36
1679 1756 0.736325 CCGTGGATGTCGTGTTCCTC 60.736 60.000 0.00 0.00 32.95 3.71
1680 1757 0.736325 CGTGGATGTCGTGTTCCTCC 60.736 60.000 0.00 0.00 32.95 4.30
1681 1758 0.391263 GTGGATGTCGTGTTCCTCCC 60.391 60.000 0.00 0.00 32.95 4.30
1682 1759 0.544357 TGGATGTCGTGTTCCTCCCT 60.544 55.000 0.00 0.00 32.95 4.20
1683 1760 0.108138 GGATGTCGTGTTCCTCCCTG 60.108 60.000 0.00 0.00 0.00 4.45
1684 1761 0.608640 GATGTCGTGTTCCTCCCTGT 59.391 55.000 0.00 0.00 0.00 4.00
1685 1762 1.822990 GATGTCGTGTTCCTCCCTGTA 59.177 52.381 0.00 0.00 0.00 2.74
1686 1763 1.254026 TGTCGTGTTCCTCCCTGTAG 58.746 55.000 0.00 0.00 0.00 2.74
1687 1764 0.531200 GTCGTGTTCCTCCCTGTAGG 59.469 60.000 0.00 0.00 38.06 3.18
1688 1765 1.218316 CGTGTTCCTCCCTGTAGGC 59.782 63.158 0.00 0.00 36.51 3.93
1689 1766 1.258445 CGTGTTCCTCCCTGTAGGCT 61.258 60.000 0.00 0.00 36.51 4.58
1690 1767 0.537653 GTGTTCCTCCCTGTAGGCTC 59.462 60.000 0.00 0.00 36.51 4.70
1691 1768 0.617820 TGTTCCTCCCTGTAGGCTCC 60.618 60.000 0.00 0.00 36.51 4.70
1692 1769 1.381327 TTCCTCCCTGTAGGCTCCG 60.381 63.158 0.00 0.00 36.51 4.63
1693 1770 2.042843 CCTCCCTGTAGGCTCCGT 60.043 66.667 0.00 0.00 34.51 4.69
1694 1771 2.128507 CCTCCCTGTAGGCTCCGTC 61.129 68.421 0.00 0.00 34.51 4.79
1695 1772 2.439701 TCCCTGTAGGCTCCGTCG 60.440 66.667 0.00 0.00 34.51 5.12
1696 1773 2.754658 CCCTGTAGGCTCCGTCGT 60.755 66.667 0.00 0.00 0.00 4.34
1697 1774 2.490217 CCTGTAGGCTCCGTCGTG 59.510 66.667 0.00 0.00 0.00 4.35
1698 1775 2.490217 CTGTAGGCTCCGTCGTGG 59.510 66.667 0.00 0.00 40.09 4.94
1699 1776 2.282674 TGTAGGCTCCGTCGTGGT 60.283 61.111 0.00 0.00 39.52 4.16
1700 1777 2.181021 GTAGGCTCCGTCGTGGTG 59.819 66.667 0.00 0.00 39.52 4.17
1705 1782 2.179517 CTCCGTCGTGGTGCTCTC 59.820 66.667 0.00 0.00 39.52 3.20
1706 1783 2.596338 TCCGTCGTGGTGCTCTCA 60.596 61.111 0.00 0.00 39.52 3.27
1707 1784 2.430921 CCGTCGTGGTGCTCTCAC 60.431 66.667 0.00 0.00 42.40 3.51
1708 1785 2.645567 CGTCGTGGTGCTCTCACT 59.354 61.111 6.05 0.00 42.72 3.41
1709 1786 1.442857 CGTCGTGGTGCTCTCACTC 60.443 63.158 6.05 0.68 42.72 3.51
1710 1787 1.080434 GTCGTGGTGCTCTCACTCC 60.080 63.158 6.05 0.00 42.72 3.85
1711 1788 1.228583 TCGTGGTGCTCTCACTCCT 60.229 57.895 6.05 0.00 42.72 3.69
1712 1789 1.214062 CGTGGTGCTCTCACTCCTC 59.786 63.158 6.05 0.00 42.72 3.71
1713 1790 1.594310 GTGGTGCTCTCACTCCTCC 59.406 63.158 0.00 0.00 42.72 4.30
1714 1791 1.610673 TGGTGCTCTCACTCCTCCC 60.611 63.158 0.00 0.00 42.72 4.30
1715 1792 2.716017 GGTGCTCTCACTCCTCCCG 61.716 68.421 0.00 0.00 42.72 5.14
1716 1793 1.979693 GTGCTCTCACTCCTCCCGT 60.980 63.158 0.00 0.00 40.03 5.28
1717 1794 1.679305 TGCTCTCACTCCTCCCGTC 60.679 63.158 0.00 0.00 0.00 4.79
1718 1795 2.766400 GCTCTCACTCCTCCCGTCG 61.766 68.421 0.00 0.00 0.00 5.12
1719 1796 1.377463 CTCTCACTCCTCCCGTCGT 60.377 63.158 0.00 0.00 0.00 4.34
1720 1797 1.649390 CTCTCACTCCTCCCGTCGTG 61.649 65.000 0.00 0.00 0.00 4.35
1721 1798 1.972223 CTCACTCCTCCCGTCGTGT 60.972 63.158 0.00 0.00 0.00 4.49
1722 1799 1.524863 CTCACTCCTCCCGTCGTGTT 61.525 60.000 0.00 0.00 0.00 3.32
1723 1800 1.080705 CACTCCTCCCGTCGTGTTC 60.081 63.158 0.00 0.00 0.00 3.18
1724 1801 2.273912 ACTCCTCCCGTCGTGTTCC 61.274 63.158 0.00 0.00 0.00 3.62
1725 1802 3.338126 CTCCTCCCGTCGTGTTCCG 62.338 68.421 0.00 0.00 38.13 4.30
1726 1803 4.430765 CCTCCCGTCGTGTTCCGG 62.431 72.222 0.00 0.00 43.82 5.14
1730 1807 3.980989 CCGTCGTGTTCCGGGTGA 61.981 66.667 0.00 0.00 40.54 4.02
1731 1808 2.027897 CGTCGTGTTCCGGGTGAA 59.972 61.111 0.00 0.00 37.11 3.18
1732 1809 1.592131 CGTCGTGTTCCGGGTGAAA 60.592 57.895 0.00 0.00 33.94 2.69
1733 1810 1.152989 CGTCGTGTTCCGGGTGAAAA 61.153 55.000 0.00 0.00 33.94 2.29
1734 1811 0.305617 GTCGTGTTCCGGGTGAAAAC 59.694 55.000 0.00 0.00 37.77 2.43
1735 1812 0.814812 TCGTGTTCCGGGTGAAAACC 60.815 55.000 0.00 0.00 37.85 3.27
1736 1813 0.816421 CGTGTTCCGGGTGAAAACCT 60.816 55.000 0.00 0.00 37.85 3.50
1737 1814 0.666374 GTGTTCCGGGTGAAAACCTG 59.334 55.000 0.00 0.00 35.47 4.00
1738 1815 0.547075 TGTTCCGGGTGAAAACCTGA 59.453 50.000 0.00 0.00 38.41 3.86
1739 1816 1.144093 TGTTCCGGGTGAAAACCTGAT 59.856 47.619 0.00 0.00 38.41 2.90
1740 1817 1.810755 GTTCCGGGTGAAAACCTGATC 59.189 52.381 0.00 0.00 38.41 2.92
1741 1818 1.358152 TCCGGGTGAAAACCTGATCT 58.642 50.000 0.00 0.00 38.41 2.75
1742 1819 1.702957 TCCGGGTGAAAACCTGATCTT 59.297 47.619 0.00 0.00 38.41 2.40
1743 1820 2.107552 TCCGGGTGAAAACCTGATCTTT 59.892 45.455 0.00 0.00 38.41 2.52
1744 1821 2.228822 CCGGGTGAAAACCTGATCTTTG 59.771 50.000 5.26 0.00 38.41 2.77
1745 1822 2.228822 CGGGTGAAAACCTGATCTTTGG 59.771 50.000 0.00 0.00 38.41 3.28
1746 1823 3.496331 GGGTGAAAACCTGATCTTTGGA 58.504 45.455 6.91 0.00 0.00 3.53
1747 1824 4.089361 GGGTGAAAACCTGATCTTTGGAT 58.911 43.478 6.91 0.00 34.45 3.41
1748 1825 4.158579 GGGTGAAAACCTGATCTTTGGATC 59.841 45.833 6.91 0.00 46.20 3.36
1757 1834 2.408050 GATCTTTGGATCGGACGATGG 58.592 52.381 12.40 0.00 38.91 3.51
1758 1835 0.179084 TCTTTGGATCGGACGATGGC 60.179 55.000 12.40 0.00 34.60 4.40
1759 1836 1.490693 CTTTGGATCGGACGATGGCG 61.491 60.000 12.40 0.00 44.79 5.69
1760 1837 1.950973 TTTGGATCGGACGATGGCGA 61.951 55.000 12.40 0.00 41.64 5.54
1761 1838 2.354773 GGATCGGACGATGGCGAC 60.355 66.667 12.40 0.00 41.64 5.19
1762 1839 2.726180 GATCGGACGATGGCGACG 60.726 66.667 12.40 0.00 41.64 5.12
1763 1840 4.266070 ATCGGACGATGGCGACGG 62.266 66.667 6.39 0.00 41.64 4.79
1766 1843 4.867599 GGACGATGGCGACGGTCC 62.868 72.222 9.81 9.81 41.64 4.46
1780 1857 4.309950 GTCCGTGGTCGTGCCCTT 62.310 66.667 0.00 0.00 36.04 3.95
1781 1858 3.998672 TCCGTGGTCGTGCCCTTC 61.999 66.667 0.00 0.00 36.04 3.46
1782 1859 4.003788 CCGTGGTCGTGCCCTTCT 62.004 66.667 0.00 0.00 36.04 2.85
1783 1860 2.030562 CGTGGTCGTGCCCTTCTT 59.969 61.111 0.00 0.00 36.04 2.52
1784 1861 2.317609 CGTGGTCGTGCCCTTCTTG 61.318 63.158 0.00 0.00 36.04 3.02
1785 1862 1.966451 GTGGTCGTGCCCTTCTTGG 60.966 63.158 0.00 0.00 36.04 3.61
1786 1863 2.144078 TGGTCGTGCCCTTCTTGGA 61.144 57.895 0.00 0.00 38.35 3.53
1787 1864 1.376037 GGTCGTGCCCTTCTTGGAG 60.376 63.158 0.00 0.00 38.35 3.86
1788 1865 1.376037 GTCGTGCCCTTCTTGGAGG 60.376 63.158 0.00 0.00 38.35 4.30
1792 1869 4.249513 GCCCTTCTTGGAGGCATC 57.750 61.111 0.00 0.00 46.34 3.91
1793 1870 1.821332 GCCCTTCTTGGAGGCATCG 60.821 63.158 0.00 0.00 46.34 3.84
1794 1871 1.604378 CCCTTCTTGGAGGCATCGT 59.396 57.895 0.00 0.00 38.35 3.73
1795 1872 0.462759 CCCTTCTTGGAGGCATCGTC 60.463 60.000 0.00 0.00 38.35 4.20
1796 1873 0.539051 CCTTCTTGGAGGCATCGTCT 59.461 55.000 0.00 0.00 38.35 4.18
1797 1874 1.065854 CCTTCTTGGAGGCATCGTCTT 60.066 52.381 0.00 0.00 38.35 3.01
1798 1875 2.005451 CTTCTTGGAGGCATCGTCTTG 58.995 52.381 0.00 0.00 0.00 3.02
1799 1876 0.250234 TCTTGGAGGCATCGTCTTGG 59.750 55.000 0.00 0.00 0.00 3.61
1800 1877 0.250234 CTTGGAGGCATCGTCTTGGA 59.750 55.000 0.00 0.00 0.00 3.53
1801 1878 0.690192 TTGGAGGCATCGTCTTGGAA 59.310 50.000 0.00 0.00 0.00 3.53
1802 1879 0.036388 TGGAGGCATCGTCTTGGAAC 60.036 55.000 0.00 0.00 0.00 3.62
1803 1880 0.744771 GGAGGCATCGTCTTGGAACC 60.745 60.000 0.00 0.00 0.00 3.62
1804 1881 0.744771 GAGGCATCGTCTTGGAACCC 60.745 60.000 0.00 0.00 0.00 4.11
1805 1882 1.201429 AGGCATCGTCTTGGAACCCT 61.201 55.000 0.00 0.00 0.00 4.34
1806 1883 0.744771 GGCATCGTCTTGGAACCCTC 60.745 60.000 0.00 0.00 0.00 4.30
1807 1884 1.084370 GCATCGTCTTGGAACCCTCG 61.084 60.000 0.00 0.00 0.00 4.63
1808 1885 0.460284 CATCGTCTTGGAACCCTCGG 60.460 60.000 0.00 0.00 0.00 4.63
1809 1886 0.903454 ATCGTCTTGGAACCCTCGGT 60.903 55.000 0.00 0.00 37.65 4.69
1810 1887 1.080025 CGTCTTGGAACCCTCGGTC 60.080 63.158 0.00 0.00 33.12 4.79
1811 1888 1.295746 GTCTTGGAACCCTCGGTCC 59.704 63.158 0.00 0.00 33.12 4.46
1812 1889 2.264794 CTTGGAACCCTCGGTCCG 59.735 66.667 4.39 4.39 33.12 4.79
1813 1890 3.310860 CTTGGAACCCTCGGTCCGG 62.311 68.421 12.29 0.00 33.12 5.14
1830 1907 3.276846 GCGTGGTCCGTTGCACTT 61.277 61.111 0.00 0.00 39.32 3.16
1831 1908 2.935955 CGTGGTCCGTTGCACTTC 59.064 61.111 0.00 0.00 0.00 3.01
1832 1909 1.594293 CGTGGTCCGTTGCACTTCT 60.594 57.895 0.00 0.00 0.00 2.85
1833 1910 1.157870 CGTGGTCCGTTGCACTTCTT 61.158 55.000 0.00 0.00 0.00 2.52
1834 1911 0.586802 GTGGTCCGTTGCACTTCTTC 59.413 55.000 0.00 0.00 0.00 2.87
1835 1912 0.534203 TGGTCCGTTGCACTTCTTCC 60.534 55.000 0.00 0.00 0.00 3.46
1836 1913 1.235281 GGTCCGTTGCACTTCTTCCC 61.235 60.000 0.00 0.00 0.00 3.97
1837 1914 1.301401 TCCGTTGCACTTCTTCCCG 60.301 57.895 0.00 0.00 0.00 5.14
1838 1915 2.325082 CCGTTGCACTTCTTCCCGG 61.325 63.158 0.00 0.00 0.00 5.73
1839 1916 1.301401 CGTTGCACTTCTTCCCGGA 60.301 57.895 0.73 0.00 0.00 5.14
1840 1917 1.566018 CGTTGCACTTCTTCCCGGAC 61.566 60.000 0.73 0.00 0.00 4.79
1841 1918 0.534203 GTTGCACTTCTTCCCGGACA 60.534 55.000 0.73 0.00 0.00 4.02
1842 1919 0.181587 TTGCACTTCTTCCCGGACAA 59.818 50.000 0.73 0.00 0.00 3.18
1843 1920 0.400213 TGCACTTCTTCCCGGACAAT 59.600 50.000 0.73 0.00 0.00 2.71
1844 1921 1.087501 GCACTTCTTCCCGGACAATC 58.912 55.000 0.73 0.00 0.00 2.67
1845 1922 1.339151 GCACTTCTTCCCGGACAATCT 60.339 52.381 0.73 0.00 0.00 2.40
1846 1923 2.622436 CACTTCTTCCCGGACAATCTC 58.378 52.381 0.73 0.00 0.00 2.75
1847 1924 2.234908 CACTTCTTCCCGGACAATCTCT 59.765 50.000 0.73 0.00 0.00 3.10
1848 1925 2.498078 ACTTCTTCCCGGACAATCTCTC 59.502 50.000 0.73 0.00 0.00 3.20
1849 1926 2.231716 TCTTCCCGGACAATCTCTCA 57.768 50.000 0.73 0.00 0.00 3.27
1850 1927 2.752030 TCTTCCCGGACAATCTCTCAT 58.248 47.619 0.73 0.00 0.00 2.90
1851 1928 2.695666 TCTTCCCGGACAATCTCTCATC 59.304 50.000 0.73 0.00 0.00 2.92
1852 1929 2.461300 TCCCGGACAATCTCTCATCT 57.539 50.000 0.73 0.00 0.00 2.90
1853 1930 2.752030 TCCCGGACAATCTCTCATCTT 58.248 47.619 0.73 0.00 0.00 2.40
1854 1931 2.432146 TCCCGGACAATCTCTCATCTTG 59.568 50.000 0.73 0.00 0.00 3.02
1855 1932 2.169352 CCCGGACAATCTCTCATCTTGT 59.831 50.000 0.73 0.00 35.89 3.16
1856 1933 3.193263 CCGGACAATCTCTCATCTTGTG 58.807 50.000 0.00 0.00 33.46 3.33
1857 1934 3.193263 CGGACAATCTCTCATCTTGTGG 58.807 50.000 0.00 0.00 33.46 4.17
1858 1935 3.368843 CGGACAATCTCTCATCTTGTGGT 60.369 47.826 0.00 0.00 33.46 4.16
1859 1936 4.142160 CGGACAATCTCTCATCTTGTGGTA 60.142 45.833 0.00 0.00 33.46 3.25
1860 1937 5.355596 GGACAATCTCTCATCTTGTGGTAG 58.644 45.833 0.00 0.00 33.46 3.18
1861 1938 5.105146 GGACAATCTCTCATCTTGTGGTAGT 60.105 44.000 0.00 0.00 33.46 2.73
1862 1939 5.971763 ACAATCTCTCATCTTGTGGTAGTC 58.028 41.667 0.00 0.00 32.16 2.59
1863 1940 4.909696 ATCTCTCATCTTGTGGTAGTCG 57.090 45.455 0.00 0.00 0.00 4.18
1864 1941 3.687125 TCTCTCATCTTGTGGTAGTCGT 58.313 45.455 0.00 0.00 0.00 4.34
1865 1942 4.079970 TCTCTCATCTTGTGGTAGTCGTT 58.920 43.478 0.00 0.00 0.00 3.85
1866 1943 4.082733 TCTCTCATCTTGTGGTAGTCGTTG 60.083 45.833 0.00 0.00 0.00 4.10
1867 1944 3.824443 TCTCATCTTGTGGTAGTCGTTGA 59.176 43.478 0.00 0.00 0.00 3.18
1868 1945 4.279922 TCTCATCTTGTGGTAGTCGTTGAA 59.720 41.667 0.00 0.00 0.00 2.69
1869 1946 4.556233 TCATCTTGTGGTAGTCGTTGAAG 58.444 43.478 0.00 0.00 0.00 3.02
1870 1947 4.038763 TCATCTTGTGGTAGTCGTTGAAGT 59.961 41.667 0.00 0.00 0.00 3.01
1871 1948 4.395959 TCTTGTGGTAGTCGTTGAAGTT 57.604 40.909 0.00 0.00 0.00 2.66
1872 1949 4.116961 TCTTGTGGTAGTCGTTGAAGTTG 58.883 43.478 0.00 0.00 0.00 3.16
1873 1950 3.530265 TGTGGTAGTCGTTGAAGTTGT 57.470 42.857 0.00 0.00 0.00 3.32
1874 1951 3.191669 TGTGGTAGTCGTTGAAGTTGTG 58.808 45.455 0.00 0.00 0.00 3.33
1875 1952 3.192466 GTGGTAGTCGTTGAAGTTGTGT 58.808 45.455 0.00 0.00 0.00 3.72
1876 1953 3.000925 GTGGTAGTCGTTGAAGTTGTGTG 59.999 47.826 0.00 0.00 0.00 3.82
1877 1954 3.192466 GGTAGTCGTTGAAGTTGTGTGT 58.808 45.455 0.00 0.00 0.00 3.72
1878 1955 3.244579 GGTAGTCGTTGAAGTTGTGTGTC 59.755 47.826 0.00 0.00 0.00 3.67
1879 1956 1.924524 AGTCGTTGAAGTTGTGTGTCG 59.075 47.619 0.00 0.00 0.00 4.35
1880 1957 1.005347 GTCGTTGAAGTTGTGTGTCGG 60.005 52.381 0.00 0.00 0.00 4.79
1881 1958 1.003851 CGTTGAAGTTGTGTGTCGGT 58.996 50.000 0.00 0.00 0.00 4.69
1882 1959 1.267334 CGTTGAAGTTGTGTGTCGGTG 60.267 52.381 0.00 0.00 0.00 4.94
1883 1960 0.730265 TTGAAGTTGTGTGTCGGTGC 59.270 50.000 0.00 0.00 0.00 5.01
1884 1961 1.092921 TGAAGTTGTGTGTCGGTGCC 61.093 55.000 0.00 0.00 0.00 5.01
1885 1962 1.782028 GAAGTTGTGTGTCGGTGCCC 61.782 60.000 0.00 0.00 0.00 5.36
1895 1972 3.814268 CGGTGCCCGGCATTCTTG 61.814 66.667 16.96 0.10 44.15 3.02
1896 1973 2.676471 GGTGCCCGGCATTCTTGT 60.676 61.111 16.96 0.00 41.91 3.16
1897 1974 2.275380 GGTGCCCGGCATTCTTGTT 61.275 57.895 16.96 0.00 41.91 2.83
1898 1975 1.665442 GTGCCCGGCATTCTTGTTT 59.335 52.632 16.96 0.00 41.91 2.83
1899 1976 0.388520 GTGCCCGGCATTCTTGTTTC 60.389 55.000 16.96 0.00 41.91 2.78
1900 1977 0.539438 TGCCCGGCATTCTTGTTTCT 60.539 50.000 8.43 0.00 31.71 2.52
1901 1978 0.603065 GCCCGGCATTCTTGTTTCTT 59.397 50.000 3.91 0.00 0.00 2.52
1902 1979 1.669795 GCCCGGCATTCTTGTTTCTTG 60.670 52.381 3.91 0.00 0.00 3.02
1903 1980 1.669795 CCCGGCATTCTTGTTTCTTGC 60.670 52.381 0.00 0.00 0.00 4.01
1908 1985 3.062042 GCATTCTTGTTTCTTGCCTTGG 58.938 45.455 0.00 0.00 0.00 3.61
1909 1986 3.656559 CATTCTTGTTTCTTGCCTTGGG 58.343 45.455 0.00 0.00 0.00 4.12
1910 1987 2.452600 TCTTGTTTCTTGCCTTGGGT 57.547 45.000 0.00 0.00 0.00 4.51
1911 1988 2.745968 TCTTGTTTCTTGCCTTGGGTT 58.254 42.857 0.00 0.00 0.00 4.11
1912 1989 2.430332 TCTTGTTTCTTGCCTTGGGTTG 59.570 45.455 0.00 0.00 0.00 3.77
1913 1990 1.859302 TGTTTCTTGCCTTGGGTTGT 58.141 45.000 0.00 0.00 0.00 3.32
1914 1991 1.480137 TGTTTCTTGCCTTGGGTTGTG 59.520 47.619 0.00 0.00 0.00 3.33
1915 1992 1.480545 GTTTCTTGCCTTGGGTTGTGT 59.519 47.619 0.00 0.00 0.00 3.72
1916 1993 1.110442 TTCTTGCCTTGGGTTGTGTG 58.890 50.000 0.00 0.00 0.00 3.82
1917 1994 0.754957 TCTTGCCTTGGGTTGTGTGG 60.755 55.000 0.00 0.00 0.00 4.17
1918 1995 2.367868 CTTGCCTTGGGTTGTGTGGC 62.368 60.000 0.00 0.00 43.49 5.01
1919 1996 3.977244 GCCTTGGGTTGTGTGGCG 61.977 66.667 0.00 0.00 33.96 5.69
1920 1997 2.518349 CCTTGGGTTGTGTGGCGT 60.518 61.111 0.00 0.00 0.00 5.68
1921 1998 2.721231 CTTGGGTTGTGTGGCGTG 59.279 61.111 0.00 0.00 0.00 5.34
1922 1999 3.483235 CTTGGGTTGTGTGGCGTGC 62.483 63.158 0.00 0.00 0.00 5.34
1925 2002 3.883180 GGTTGTGTGGCGTGCGTT 61.883 61.111 0.00 0.00 0.00 4.84
1926 2003 2.101380 GTTGTGTGGCGTGCGTTT 59.899 55.556 0.00 0.00 0.00 3.60
1927 2004 2.101185 TTGTGTGGCGTGCGTTTG 59.899 55.556 0.00 0.00 0.00 2.93
1928 2005 2.691771 TTGTGTGGCGTGCGTTTGT 61.692 52.632 0.00 0.00 0.00 2.83
1929 2006 1.366854 TTGTGTGGCGTGCGTTTGTA 61.367 50.000 0.00 0.00 0.00 2.41
1930 2007 1.160946 TGTGTGGCGTGCGTTTGTAT 61.161 50.000 0.00 0.00 0.00 2.29
1931 2008 0.452122 GTGTGGCGTGCGTTTGTATC 60.452 55.000 0.00 0.00 0.00 2.24
1932 2009 1.225637 GTGGCGTGCGTTTGTATCG 60.226 57.895 0.00 0.00 0.00 2.92
1933 2010 2.384309 TGGCGTGCGTTTGTATCGG 61.384 57.895 0.00 0.00 0.00 4.18
1934 2011 2.385091 GGCGTGCGTTTGTATCGGT 61.385 57.895 0.00 0.00 0.00 4.69
1935 2012 1.494189 GCGTGCGTTTGTATCGGTT 59.506 52.632 0.00 0.00 0.00 4.44
1936 2013 0.517742 GCGTGCGTTTGTATCGGTTC 60.518 55.000 0.00 0.00 0.00 3.62
1937 2014 1.065358 CGTGCGTTTGTATCGGTTCT 58.935 50.000 0.00 0.00 0.00 3.01
1938 2015 1.458064 CGTGCGTTTGTATCGGTTCTT 59.542 47.619 0.00 0.00 0.00 2.52
1939 2016 2.720590 CGTGCGTTTGTATCGGTTCTTG 60.721 50.000 0.00 0.00 0.00 3.02
1940 2017 1.801771 TGCGTTTGTATCGGTTCTTGG 59.198 47.619 0.00 0.00 0.00 3.61
1941 2018 2.070783 GCGTTTGTATCGGTTCTTGGA 58.929 47.619 0.00 0.00 0.00 3.53
1942 2019 2.676342 GCGTTTGTATCGGTTCTTGGAT 59.324 45.455 0.00 0.00 0.00 3.41
1943 2020 3.485216 GCGTTTGTATCGGTTCTTGGATG 60.485 47.826 0.00 0.00 0.00 3.51
1944 2021 3.682858 CGTTTGTATCGGTTCTTGGATGT 59.317 43.478 0.00 0.00 0.00 3.06
1945 2022 4.865925 CGTTTGTATCGGTTCTTGGATGTA 59.134 41.667 0.00 0.00 0.00 2.29
1946 2023 5.349270 CGTTTGTATCGGTTCTTGGATGTAA 59.651 40.000 0.00 0.00 0.00 2.41
1947 2024 6.455113 CGTTTGTATCGGTTCTTGGATGTAAG 60.455 42.308 0.00 0.00 0.00 2.34
1948 2025 5.670792 TGTATCGGTTCTTGGATGTAAGT 57.329 39.130 0.00 0.00 0.00 2.24
1949 2026 5.416083 TGTATCGGTTCTTGGATGTAAGTG 58.584 41.667 0.00 0.00 0.00 3.16
1950 2027 4.553330 ATCGGTTCTTGGATGTAAGTGT 57.447 40.909 0.00 0.00 0.00 3.55
1951 2028 4.345859 TCGGTTCTTGGATGTAAGTGTT 57.654 40.909 0.00 0.00 0.00 3.32
1952 2029 4.062293 TCGGTTCTTGGATGTAAGTGTTG 58.938 43.478 0.00 0.00 0.00 3.33
1953 2030 3.188460 CGGTTCTTGGATGTAAGTGTTGG 59.812 47.826 0.00 0.00 0.00 3.77
1954 2031 4.142038 GGTTCTTGGATGTAAGTGTTGGT 58.858 43.478 0.00 0.00 0.00 3.67
1955 2032 4.023193 GGTTCTTGGATGTAAGTGTTGGTG 60.023 45.833 0.00 0.00 0.00 4.17
1956 2033 3.146066 TCTTGGATGTAAGTGTTGGTGC 58.854 45.455 0.00 0.00 0.00 5.01
1957 2034 2.949177 TGGATGTAAGTGTTGGTGCT 57.051 45.000 0.00 0.00 0.00 4.40
1958 2035 3.222173 TGGATGTAAGTGTTGGTGCTT 57.778 42.857 0.00 0.00 0.00 3.91
1959 2036 3.561143 TGGATGTAAGTGTTGGTGCTTT 58.439 40.909 0.00 0.00 0.00 3.51
1960 2037 4.720046 TGGATGTAAGTGTTGGTGCTTTA 58.280 39.130 0.00 0.00 0.00 1.85
1961 2038 5.321102 TGGATGTAAGTGTTGGTGCTTTAT 58.679 37.500 0.00 0.00 0.00 1.40
1962 2039 5.772672 TGGATGTAAGTGTTGGTGCTTTATT 59.227 36.000 0.00 0.00 0.00 1.40
1963 2040 6.266558 TGGATGTAAGTGTTGGTGCTTTATTT 59.733 34.615 0.00 0.00 0.00 1.40
1964 2041 7.448777 TGGATGTAAGTGTTGGTGCTTTATTTA 59.551 33.333 0.00 0.00 0.00 1.40
1965 2042 8.466798 GGATGTAAGTGTTGGTGCTTTATTTAT 58.533 33.333 0.00 0.00 0.00 1.40
2012 2089 3.672503 GGAGGGGGTGGGTGCATT 61.673 66.667 0.00 0.00 0.00 3.56
2037 2114 2.424601 GCAGCAGCAAAAGGTGATATCA 59.575 45.455 0.00 0.00 41.58 2.15
2764 2932 1.460255 CCAGCCTTGGGAAACTCCA 59.540 57.895 0.00 0.00 41.05 3.86
3824 3998 2.787473 TCATTTCTCATTGCCGGTCT 57.213 45.000 1.90 0.00 0.00 3.85
3831 4005 0.247460 TCATTGCCGGTCTCTCAGTG 59.753 55.000 1.90 0.00 0.00 3.66
3977 4157 1.571919 AGTATTTGCGGCTCGATGTC 58.428 50.000 0.00 0.00 0.00 3.06
4299 4479 6.885735 ACAAAGAAATTTTTGTGGAGAACG 57.114 33.333 7.32 0.00 46.44 3.95
4865 5045 2.524887 ACGGTTCGGGAGGTGGAA 60.525 61.111 0.00 0.00 0.00 3.53
5034 5241 9.150348 TCTGACAAATTTTCAGGTTTTCTTTTC 57.850 29.630 20.52 0.00 40.87 2.29
5063 5274 7.179338 TCCCTTAGGCTGCATAATTTTTGTAAA 59.821 33.333 7.25 0.00 0.00 2.01
5069 5280 7.064490 AGGCTGCATAATTTTTGTAAATTTCCG 59.936 33.333 0.50 0.00 40.22 4.30
5131 6530 7.482654 AATTACATATGGATCACTGAACACG 57.517 36.000 7.80 0.00 0.00 4.49
5152 6551 4.219070 ACGTACTGCTGGTTCAAGTATGTA 59.781 41.667 5.37 0.00 34.60 2.29
5214 6613 3.200385 GTGGGTCAGTCTAGGAGTCTAGA 59.800 52.174 0.00 0.00 46.96 2.43
5235 6634 2.506444 TCGGTACCAACATTTTGTCCC 58.494 47.619 13.54 0.00 0.00 4.46
5307 6706 6.901081 AAAAAGGACAAATCTGGTAGGAAG 57.099 37.500 0.00 0.00 0.00 3.46
5345 6744 1.534729 GAGGTGTTCCATCCAACCAC 58.465 55.000 0.00 0.00 35.01 4.16
5399 6798 1.687123 CCTAGTCCACCCAATCCTACG 59.313 57.143 0.00 0.00 0.00 3.51
5411 6810 3.066760 CCAATCCTACGCTTCCATTTTCC 59.933 47.826 0.00 0.00 0.00 3.13
5418 6817 2.296190 ACGCTTCCATTTTCCTGTTTCC 59.704 45.455 0.00 0.00 0.00 3.13
5459 6858 3.624777 ACCAAAACCATGATGCTCCTAG 58.375 45.455 0.00 0.00 0.00 3.02
5461 6860 3.881688 CCAAAACCATGATGCTCCTAGAG 59.118 47.826 0.00 0.00 0.00 2.43
5624 7025 4.009675 TCAAAGAATGCCACTATGACCAC 58.990 43.478 0.00 0.00 0.00 4.16
5809 11133 4.651045 ACAGAAGGAAGCAAAGGAACAAAT 59.349 37.500 0.00 0.00 0.00 2.32
5868 11194 2.512515 GCACCCTCGATGTCAGGC 60.513 66.667 0.00 0.00 0.00 4.85
5869 11195 2.187946 CACCCTCGATGTCAGGCC 59.812 66.667 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 6.544564 TGCATCATGAACATGTCAACTATGAT 59.455 34.615 13.35 7.91 40.50 2.45
24 25 6.585416 AGTAGTATGCATCATGAACATGTCA 58.415 36.000 19.60 8.78 41.67 3.58
29 30 5.744171 ACCAAGTAGTATGCATCATGAACA 58.256 37.500 0.19 1.24 0.00 3.18
42 44 5.624281 GCAAACATACCCGTACCAAGTAGTA 60.624 44.000 0.00 0.00 0.00 1.82
43 45 4.824289 CAAACATACCCGTACCAAGTAGT 58.176 43.478 0.00 0.00 0.00 2.73
44 46 3.619929 GCAAACATACCCGTACCAAGTAG 59.380 47.826 0.00 0.00 0.00 2.57
51 53 4.752661 TTCAAAGCAAACATACCCGTAC 57.247 40.909 0.00 0.00 0.00 3.67
54 56 6.538189 AATTTTTCAAAGCAAACATACCCG 57.462 33.333 0.00 0.00 0.00 5.28
62 64 8.782144 AGAACTTGTCAAATTTTTCAAAGCAAA 58.218 25.926 0.00 0.00 0.00 3.68
71 73 8.177013 GTGAAATGCAGAACTTGTCAAATTTTT 58.823 29.630 0.00 0.00 0.00 1.94
73 75 7.010738 CAGTGAAATGCAGAACTTGTCAAATTT 59.989 33.333 0.00 0.00 0.00 1.82
94 96 5.306937 TCATCAGAGGGTTAAAGAACAGTGA 59.693 40.000 0.00 0.00 37.29 3.41
105 107 5.571285 AGCGATATAGTCATCAGAGGGTTA 58.429 41.667 0.00 0.00 0.00 2.85
126 128 2.735663 TGCGTAGATAGTAGCGACTAGC 59.264 50.000 13.59 13.59 43.59 3.42
127 129 4.090354 GTCTGCGTAGATAGTAGCGACTAG 59.910 50.000 12.39 0.00 41.50 2.57
128 130 3.986572 GTCTGCGTAGATAGTAGCGACTA 59.013 47.826 6.47 9.24 42.41 2.59
129 131 2.801679 GTCTGCGTAGATAGTAGCGACT 59.198 50.000 6.47 4.47 39.92 4.18
130 132 2.096318 GGTCTGCGTAGATAGTAGCGAC 60.096 54.545 6.47 0.00 34.94 5.19
132 134 1.871676 TGGTCTGCGTAGATAGTAGCG 59.128 52.381 6.47 0.00 34.94 4.26
186 196 6.116711 TGACTGTACATAGTAGGGCAAAAA 57.883 37.500 0.00 0.00 0.00 1.94
214 228 8.184192 GTCTGCATATACATAAGTTGTGCTTTT 58.816 33.333 0.00 0.00 39.48 2.27
227 241 5.262588 TCAGTTCGTGTCTGCATATACAT 57.737 39.130 0.17 0.00 33.48 2.29
243 261 4.212214 CCGCTAGCAAATAAGGATCAGTTC 59.788 45.833 16.45 0.00 0.00 3.01
252 270 2.833794 TGTAGCCCGCTAGCAAATAAG 58.166 47.619 16.45 0.00 34.23 1.73
264 282 2.870411 GCCAGTATTTAGTTGTAGCCCG 59.130 50.000 0.00 0.00 0.00 6.13
268 286 5.291128 CGGTTCAGCCAGTATTTAGTTGTAG 59.709 44.000 0.00 0.00 36.97 2.74
320 383 2.437200 ATGTTCACAAATGCCAACCG 57.563 45.000 0.00 0.00 0.00 4.44
333 396 8.177119 ACTAAACTTGCCATCTAAAATGTTCA 57.823 30.769 0.00 0.00 0.00 3.18
372 435 4.295051 CAATTTTGGGACACACTAAACCG 58.705 43.478 0.00 0.00 39.29 4.44
504 567 3.868757 TGAGTTGCTACGCTAACTGAT 57.131 42.857 3.59 0.00 37.27 2.90
513 576 7.019418 GGTTAAAATACCTTTGAGTTGCTACG 58.981 38.462 0.00 0.00 35.23 3.51
668 732 5.151297 TCAGTCACTCTGCAAATGACATA 57.849 39.130 20.65 9.70 44.26 2.29
669 733 4.011966 TCAGTCACTCTGCAAATGACAT 57.988 40.909 20.65 8.29 44.26 3.06
679 743 8.945481 ATTTCTATCAGAATTCAGTCACTCTG 57.055 34.615 8.44 0.00 38.51 3.35
687 751 9.635520 AAACTTGCAATTTCTATCAGAATTCAG 57.364 29.630 8.44 0.00 33.67 3.02
826 891 4.516092 ACAATCGTAACTTCATAAGCGC 57.484 40.909 0.00 0.00 0.00 5.92
860 925 7.531857 AGGTCTGTAGGTATCATACTGAATG 57.468 40.000 0.00 0.00 34.27 2.67
899 970 6.205464 GCAAACACCTGCTGATATATGTATGT 59.795 38.462 0.00 0.00 39.34 2.29
926 997 0.877071 CCACAAGCTTCAGCACGATT 59.123 50.000 0.00 0.00 45.16 3.34
927 998 1.580845 GCCACAAGCTTCAGCACGAT 61.581 55.000 0.00 0.00 45.16 3.73
1224 1301 5.791336 AGTCGTCTATGCAATCCTCAATA 57.209 39.130 0.00 0.00 0.00 1.90
1301 1378 1.408405 CCTTGAGCTGCTGGATCACAT 60.408 52.381 7.01 0.00 40.29 3.21
1331 1408 0.242017 GCTGGATATTTGATGGCGCC 59.758 55.000 22.73 22.73 0.00 6.53
1435 1512 0.749091 TCAATGGCCCTTGAGATGCG 60.749 55.000 18.40 0.00 31.65 4.73
1494 1571 1.393539 CTTGGCTTGTCAATACCGACG 59.606 52.381 0.00 0.00 38.84 5.12
1538 1615 3.970410 CAAGCTGCACCCCCTCCA 61.970 66.667 1.02 0.00 0.00 3.86
1539 1616 4.748144 CCAAGCTGCACCCCCTCC 62.748 72.222 1.02 0.00 0.00 4.30
1540 1617 4.748144 CCCAAGCTGCACCCCCTC 62.748 72.222 1.02 0.00 0.00 4.30
1546 1623 2.993264 ATGCCACCCAAGCTGCAC 60.993 61.111 1.02 0.00 36.41 4.57
1547 1624 2.992689 CATGCCACCCAAGCTGCA 60.993 61.111 1.02 0.00 38.23 4.41
1548 1625 3.766691 CCATGCCACCCAAGCTGC 61.767 66.667 0.00 0.00 0.00 5.25
1549 1626 1.909781 AACCATGCCACCCAAGCTG 60.910 57.895 0.00 0.00 0.00 4.24
1550 1627 1.909781 CAACCATGCCACCCAAGCT 60.910 57.895 0.00 0.00 0.00 3.74
1551 1628 2.658422 CAACCATGCCACCCAAGC 59.342 61.111 0.00 0.00 0.00 4.01
1561 1638 1.667151 CCAACCACCTGCAACCATG 59.333 57.895 0.00 0.00 0.00 3.66
1562 1639 2.209315 GCCAACCACCTGCAACCAT 61.209 57.895 0.00 0.00 0.00 3.55
1563 1640 2.837291 GCCAACCACCTGCAACCA 60.837 61.111 0.00 0.00 0.00 3.67
1564 1641 3.615709 GGCCAACCACCTGCAACC 61.616 66.667 0.00 0.00 35.26 3.77
1565 1642 3.977244 CGGCCAACCACCTGCAAC 61.977 66.667 2.24 0.00 34.57 4.17
1566 1643 4.196778 TCGGCCAACCACCTGCAA 62.197 61.111 2.24 0.00 34.57 4.08
1567 1644 4.947147 GTCGGCCAACCACCTGCA 62.947 66.667 2.24 0.00 34.57 4.41
1584 1661 4.609018 CTACCGCTGCATCCCCGG 62.609 72.222 11.98 11.98 46.97 5.73
1585 1662 4.609018 CCTACCGCTGCATCCCCG 62.609 72.222 0.00 0.00 0.00 5.73
1586 1663 4.256180 CCCTACCGCTGCATCCCC 62.256 72.222 0.00 0.00 0.00 4.81
1587 1664 3.480133 ACCCTACCGCTGCATCCC 61.480 66.667 0.00 0.00 0.00 3.85
1588 1665 2.203070 CACCCTACCGCTGCATCC 60.203 66.667 0.00 0.00 0.00 3.51
1589 1666 2.203070 CCACCCTACCGCTGCATC 60.203 66.667 0.00 0.00 0.00 3.91
1590 1667 2.687200 TCCACCCTACCGCTGCAT 60.687 61.111 0.00 0.00 0.00 3.96
1591 1668 3.390521 CTCCACCCTACCGCTGCA 61.391 66.667 0.00 0.00 0.00 4.41
1592 1669 4.840005 GCTCCACCCTACCGCTGC 62.840 72.222 0.00 0.00 0.00 5.25
1593 1670 3.390521 TGCTCCACCCTACCGCTG 61.391 66.667 0.00 0.00 0.00 5.18
1594 1671 3.391382 GTGCTCCACCCTACCGCT 61.391 66.667 0.00 0.00 0.00 5.52
1603 1680 3.268103 ATGAACCCCGGTGCTCCAC 62.268 63.158 0.00 0.00 0.00 4.02
1604 1681 2.933287 ATGAACCCCGGTGCTCCA 60.933 61.111 0.00 0.00 0.00 3.86
1605 1682 2.124695 GATGAACCCCGGTGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
1606 1683 1.745489 GTGATGAACCCCGGTGCTC 60.745 63.158 0.00 0.00 0.00 4.26
1607 1684 1.779061 AAGTGATGAACCCCGGTGCT 61.779 55.000 0.00 0.00 0.00 4.40
1608 1685 0.035820 TAAGTGATGAACCCCGGTGC 60.036 55.000 0.00 0.00 0.00 5.01
1609 1686 1.677820 GGTAAGTGATGAACCCCGGTG 60.678 57.143 0.00 0.00 0.00 4.94
1610 1687 0.616891 GGTAAGTGATGAACCCCGGT 59.383 55.000 0.00 0.00 0.00 5.28
1611 1688 0.909623 AGGTAAGTGATGAACCCCGG 59.090 55.000 0.00 0.00 33.53 5.73
1612 1689 1.278127 ACAGGTAAGTGATGAACCCCG 59.722 52.381 0.00 0.00 33.53 5.73
1613 1690 2.355818 GGACAGGTAAGTGATGAACCCC 60.356 54.545 0.00 0.00 33.53 4.95
1614 1691 2.677037 CGGACAGGTAAGTGATGAACCC 60.677 54.545 0.00 0.00 33.53 4.11
1615 1692 2.028385 ACGGACAGGTAAGTGATGAACC 60.028 50.000 0.00 0.00 0.00 3.62
1616 1693 3.314541 ACGGACAGGTAAGTGATGAAC 57.685 47.619 0.00 0.00 0.00 3.18
1617 1694 3.827876 TGTACGGACAGGTAAGTGATGAA 59.172 43.478 0.00 0.00 0.00 2.57
1618 1695 3.192001 GTGTACGGACAGGTAAGTGATGA 59.808 47.826 0.00 0.00 35.82 2.92
1619 1696 3.508762 GTGTACGGACAGGTAAGTGATG 58.491 50.000 0.00 0.00 35.82 3.07
1620 1697 2.163010 CGTGTACGGACAGGTAAGTGAT 59.837 50.000 12.38 0.00 35.82 3.06
1621 1698 1.536766 CGTGTACGGACAGGTAAGTGA 59.463 52.381 12.38 0.00 35.82 3.41
1622 1699 1.973138 CGTGTACGGACAGGTAAGTG 58.027 55.000 12.38 0.00 35.82 3.16
1634 1711 3.726517 ACCGTCGACCCGTGTACG 61.727 66.667 10.58 0.00 39.44 3.67
1635 1712 2.126734 CACCGTCGACCCGTGTAC 60.127 66.667 17.98 0.00 0.00 2.90
1636 1713 3.364441 CCACCGTCGACCCGTGTA 61.364 66.667 22.16 0.00 0.00 2.90
1655 1732 4.430765 ACGACATCCACGGACGCC 62.431 66.667 0.00 0.00 34.93 5.68
1656 1733 3.179265 CACGACATCCACGGACGC 61.179 66.667 0.00 0.00 34.93 5.19
1657 1734 1.342082 GAACACGACATCCACGGACG 61.342 60.000 0.00 0.00 34.93 4.79
1658 1735 1.012486 GGAACACGACATCCACGGAC 61.012 60.000 0.00 0.00 35.71 4.79
1659 1736 1.183030 AGGAACACGACATCCACGGA 61.183 55.000 0.00 0.00 38.23 4.69
1660 1737 0.736325 GAGGAACACGACATCCACGG 60.736 60.000 0.00 0.00 38.23 4.94
1661 1738 0.736325 GGAGGAACACGACATCCACG 60.736 60.000 0.00 0.00 38.00 4.94
1662 1739 0.391263 GGGAGGAACACGACATCCAC 60.391 60.000 0.00 0.00 39.56 4.02
1663 1740 0.544357 AGGGAGGAACACGACATCCA 60.544 55.000 0.00 0.00 39.56 3.41
1664 1741 0.108138 CAGGGAGGAACACGACATCC 60.108 60.000 0.00 0.00 37.47 3.51
1665 1742 0.608640 ACAGGGAGGAACACGACATC 59.391 55.000 0.00 0.00 0.00 3.06
1666 1743 1.825474 CTACAGGGAGGAACACGACAT 59.175 52.381 0.00 0.00 0.00 3.06
1667 1744 1.254026 CTACAGGGAGGAACACGACA 58.746 55.000 0.00 0.00 0.00 4.35
1668 1745 0.531200 CCTACAGGGAGGAACACGAC 59.469 60.000 0.00 0.00 39.15 4.34
1669 1746 1.255667 GCCTACAGGGAGGAACACGA 61.256 60.000 0.47 0.00 39.15 4.35
1670 1747 1.218316 GCCTACAGGGAGGAACACG 59.782 63.158 0.47 0.00 39.15 4.49
1671 1748 0.537653 GAGCCTACAGGGAGGAACAC 59.462 60.000 0.47 0.00 39.15 3.32
1672 1749 0.617820 GGAGCCTACAGGGAGGAACA 60.618 60.000 0.47 0.00 39.15 3.18
1673 1750 1.677637 CGGAGCCTACAGGGAGGAAC 61.678 65.000 0.47 0.00 39.15 3.62
1674 1751 1.381327 CGGAGCCTACAGGGAGGAA 60.381 63.158 0.47 0.00 39.15 3.36
1675 1752 2.279073 CGGAGCCTACAGGGAGGA 59.721 66.667 0.47 0.00 39.15 3.71
1676 1753 2.042843 ACGGAGCCTACAGGGAGG 60.043 66.667 0.00 0.00 39.88 4.30
1677 1754 2.482333 CGACGGAGCCTACAGGGAG 61.482 68.421 0.00 0.00 37.23 4.30
1678 1755 2.439701 CGACGGAGCCTACAGGGA 60.440 66.667 0.00 0.00 37.23 4.20
1679 1756 2.754658 ACGACGGAGCCTACAGGG 60.755 66.667 0.00 0.00 35.18 4.45
1680 1757 2.490217 CACGACGGAGCCTACAGG 59.510 66.667 0.00 0.00 38.53 4.00
1681 1758 2.341101 ACCACGACGGAGCCTACAG 61.341 63.158 0.00 0.00 38.63 2.74
1682 1759 2.282674 ACCACGACGGAGCCTACA 60.283 61.111 0.00 0.00 38.63 2.74
1683 1760 2.181021 CACCACGACGGAGCCTAC 59.819 66.667 0.00 0.00 38.63 3.18
1684 1761 3.755628 GCACCACGACGGAGCCTA 61.756 66.667 0.00 0.00 45.00 3.93
1688 1765 2.179517 GAGAGCACCACGACGGAG 59.820 66.667 0.00 0.00 38.63 4.63
1689 1766 2.596338 TGAGAGCACCACGACGGA 60.596 61.111 0.00 0.00 38.63 4.69
1690 1767 2.430921 GTGAGAGCACCACGACGG 60.431 66.667 0.00 0.00 39.14 4.79
1691 1768 1.442857 GAGTGAGAGCACCACGACG 60.443 63.158 0.00 0.00 46.32 5.12
1692 1769 1.080434 GGAGTGAGAGCACCACGAC 60.080 63.158 0.00 0.00 46.32 4.34
1693 1770 1.228583 AGGAGTGAGAGCACCACGA 60.229 57.895 0.00 0.00 46.32 4.35
1694 1771 1.214062 GAGGAGTGAGAGCACCACG 59.786 63.158 0.00 0.00 46.32 4.94
1695 1772 1.594310 GGAGGAGTGAGAGCACCAC 59.406 63.158 0.00 0.00 46.32 4.16
1696 1773 1.610673 GGGAGGAGTGAGAGCACCA 60.611 63.158 0.00 0.00 46.32 4.17
1697 1774 2.716017 CGGGAGGAGTGAGAGCACC 61.716 68.421 0.00 0.00 46.32 5.01
1698 1775 1.939769 GACGGGAGGAGTGAGAGCAC 61.940 65.000 0.00 0.00 45.49 4.40
1699 1776 1.679305 GACGGGAGGAGTGAGAGCA 60.679 63.158 0.00 0.00 0.00 4.26
1700 1777 2.766400 CGACGGGAGGAGTGAGAGC 61.766 68.421 0.00 0.00 0.00 4.09
1701 1778 1.377463 ACGACGGGAGGAGTGAGAG 60.377 63.158 0.00 0.00 0.00 3.20
1702 1779 1.674651 CACGACGGGAGGAGTGAGA 60.675 63.158 0.00 0.00 41.62 3.27
1703 1780 1.524863 AACACGACGGGAGGAGTGAG 61.525 60.000 2.90 0.00 41.62 3.51
1704 1781 1.521450 GAACACGACGGGAGGAGTGA 61.521 60.000 2.90 0.00 41.62 3.41
1705 1782 1.080705 GAACACGACGGGAGGAGTG 60.081 63.158 2.90 0.00 43.59 3.51
1706 1783 2.273912 GGAACACGACGGGAGGAGT 61.274 63.158 2.90 0.00 0.00 3.85
1707 1784 2.572284 GGAACACGACGGGAGGAG 59.428 66.667 2.90 0.00 0.00 3.69
1715 1792 2.995442 GGTTTTCACCCGGAACACGAC 61.995 57.143 0.73 0.00 43.93 4.34
1716 1793 0.814812 GGTTTTCACCCGGAACACGA 60.815 55.000 0.73 0.00 43.93 4.35
1717 1794 0.816421 AGGTTTTCACCCGGAACACG 60.816 55.000 0.73 0.00 45.63 4.49
1718 1795 0.666374 CAGGTTTTCACCCGGAACAC 59.334 55.000 0.73 0.00 45.63 3.32
1719 1796 0.547075 TCAGGTTTTCACCCGGAACA 59.453 50.000 0.73 0.00 45.63 3.18
1720 1797 1.810755 GATCAGGTTTTCACCCGGAAC 59.189 52.381 0.73 0.00 45.63 3.62
1721 1798 1.702957 AGATCAGGTTTTCACCCGGAA 59.297 47.619 0.73 0.00 45.63 4.30
1722 1799 1.358152 AGATCAGGTTTTCACCCGGA 58.642 50.000 0.73 0.00 45.63 5.14
1723 1800 2.200373 AAGATCAGGTTTTCACCCGG 57.800 50.000 0.00 0.00 45.63 5.73
1724 1801 2.228822 CCAAAGATCAGGTTTTCACCCG 59.771 50.000 0.00 0.00 45.63 5.28
1725 1802 3.496331 TCCAAAGATCAGGTTTTCACCC 58.504 45.455 0.00 0.00 45.63 4.61
1737 1814 2.408050 CCATCGTCCGATCCAAAGATC 58.592 52.381 0.00 0.00 44.76 2.75
1738 1815 1.541233 GCCATCGTCCGATCCAAAGAT 60.541 52.381 0.00 0.00 34.57 2.40
1739 1816 0.179084 GCCATCGTCCGATCCAAAGA 60.179 55.000 0.00 0.00 31.62 2.52
1740 1817 1.490693 CGCCATCGTCCGATCCAAAG 61.491 60.000 0.00 0.00 31.62 2.77
1741 1818 1.520564 CGCCATCGTCCGATCCAAA 60.521 57.895 0.00 0.00 31.62 3.28
1742 1819 2.106131 CGCCATCGTCCGATCCAA 59.894 61.111 0.00 0.00 31.62 3.53
1743 1820 2.831284 TCGCCATCGTCCGATCCA 60.831 61.111 0.00 0.00 36.96 3.41
1744 1821 2.354773 GTCGCCATCGTCCGATCC 60.355 66.667 0.00 0.00 35.76 3.36
1745 1822 2.726180 CGTCGCCATCGTCCGATC 60.726 66.667 0.00 0.00 35.76 3.69
1746 1823 4.266070 CCGTCGCCATCGTCCGAT 62.266 66.667 0.00 0.00 35.76 4.18
1749 1826 4.867599 GGACCGTCGCCATCGTCC 62.868 72.222 2.47 2.47 36.96 4.79
1763 1840 4.309950 AAGGGCACGACCACGGAC 62.310 66.667 0.00 0.00 44.46 4.79
1764 1841 3.998672 GAAGGGCACGACCACGGA 61.999 66.667 0.00 0.00 44.46 4.69
1765 1842 3.530910 AAGAAGGGCACGACCACGG 62.531 63.158 0.00 0.00 44.46 4.94
1766 1843 2.030562 AAGAAGGGCACGACCACG 59.969 61.111 0.00 0.00 42.05 4.94
1767 1844 1.966451 CCAAGAAGGGCACGACCAC 60.966 63.158 0.00 0.00 42.05 4.16
1768 1845 2.111999 CTCCAAGAAGGGCACGACCA 62.112 60.000 0.00 0.00 42.05 4.02
1769 1846 1.376037 CTCCAAGAAGGGCACGACC 60.376 63.158 0.00 0.00 38.24 4.79
1770 1847 1.376037 CCTCCAAGAAGGGCACGAC 60.376 63.158 0.00 0.00 38.24 4.34
1771 1848 3.068881 CCTCCAAGAAGGGCACGA 58.931 61.111 0.00 0.00 38.24 4.35
1772 1849 2.747855 GCCTCCAAGAAGGGCACG 60.748 66.667 0.00 0.00 44.69 5.34
1775 1852 1.821332 CGATGCCTCCAAGAAGGGC 60.821 63.158 0.00 0.00 45.45 5.19
1776 1853 0.462759 GACGATGCCTCCAAGAAGGG 60.463 60.000 0.00 0.00 36.88 3.95
1777 1854 0.539051 AGACGATGCCTCCAAGAAGG 59.461 55.000 0.00 0.00 39.62 3.46
1778 1855 2.005451 CAAGACGATGCCTCCAAGAAG 58.995 52.381 0.00 0.00 0.00 2.85
1779 1856 1.339055 CCAAGACGATGCCTCCAAGAA 60.339 52.381 0.00 0.00 0.00 2.52
1780 1857 0.250234 CCAAGACGATGCCTCCAAGA 59.750 55.000 0.00 0.00 0.00 3.02
1781 1858 0.250234 TCCAAGACGATGCCTCCAAG 59.750 55.000 0.00 0.00 0.00 3.61
1782 1859 0.690192 TTCCAAGACGATGCCTCCAA 59.310 50.000 0.00 0.00 0.00 3.53
1783 1860 0.036388 GTTCCAAGACGATGCCTCCA 60.036 55.000 0.00 0.00 0.00 3.86
1784 1861 0.744771 GGTTCCAAGACGATGCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
1785 1862 0.744771 GGGTTCCAAGACGATGCCTC 60.745 60.000 0.00 0.00 0.00 4.70
1786 1863 1.201429 AGGGTTCCAAGACGATGCCT 61.201 55.000 0.00 0.00 0.00 4.75
1787 1864 0.744771 GAGGGTTCCAAGACGATGCC 60.745 60.000 0.00 0.00 0.00 4.40
1788 1865 1.084370 CGAGGGTTCCAAGACGATGC 61.084 60.000 0.00 0.00 0.00 3.91
1789 1866 0.460284 CCGAGGGTTCCAAGACGATG 60.460 60.000 0.00 0.00 0.00 3.84
1790 1867 0.903454 ACCGAGGGTTCCAAGACGAT 60.903 55.000 0.00 0.00 27.29 3.73
1791 1868 1.530013 GACCGAGGGTTCCAAGACGA 61.530 60.000 0.00 0.00 35.25 4.20
1792 1869 1.080025 GACCGAGGGTTCCAAGACG 60.080 63.158 0.00 0.00 35.25 4.18
1793 1870 1.295746 GGACCGAGGGTTCCAAGAC 59.704 63.158 0.00 0.00 35.25 3.01
1794 1871 2.280552 CGGACCGAGGGTTCCAAGA 61.281 63.158 8.64 0.00 35.25 3.02
1795 1872 2.264794 CGGACCGAGGGTTCCAAG 59.735 66.667 8.64 0.00 35.25 3.61
1796 1873 3.315949 CCGGACCGAGGGTTCCAA 61.316 66.667 17.49 0.00 35.25 3.53
1815 1892 0.586802 GAAGAAGTGCAACGGACCAC 59.413 55.000 0.00 0.00 45.86 4.16
1816 1893 0.534203 GGAAGAAGTGCAACGGACCA 60.534 55.000 0.00 0.00 45.86 4.02
1817 1894 1.235281 GGGAAGAAGTGCAACGGACC 61.235 60.000 0.00 0.00 45.86 4.46
1818 1895 1.566018 CGGGAAGAAGTGCAACGGAC 61.566 60.000 0.00 0.00 45.86 4.79
1819 1896 1.301401 CGGGAAGAAGTGCAACGGA 60.301 57.895 0.00 0.00 45.86 4.69
1820 1897 2.325082 CCGGGAAGAAGTGCAACGG 61.325 63.158 0.00 0.00 45.86 4.44
1821 1898 1.301401 TCCGGGAAGAAGTGCAACG 60.301 57.895 0.00 0.00 45.86 4.10
1822 1899 0.534203 TGTCCGGGAAGAAGTGCAAC 60.534 55.000 0.00 0.00 0.00 4.17
1823 1900 0.181587 TTGTCCGGGAAGAAGTGCAA 59.818 50.000 0.00 0.00 0.00 4.08
1824 1901 0.400213 ATTGTCCGGGAAGAAGTGCA 59.600 50.000 0.00 0.00 0.00 4.57
1825 1902 1.087501 GATTGTCCGGGAAGAAGTGC 58.912 55.000 0.00 0.00 0.00 4.40
1826 1903 2.234908 AGAGATTGTCCGGGAAGAAGTG 59.765 50.000 0.00 0.00 0.00 3.16
1827 1904 2.498078 GAGAGATTGTCCGGGAAGAAGT 59.502 50.000 0.00 0.00 0.00 3.01
1828 1905 2.497675 TGAGAGATTGTCCGGGAAGAAG 59.502 50.000 0.00 0.00 0.00 2.85
1829 1906 2.536066 TGAGAGATTGTCCGGGAAGAA 58.464 47.619 0.00 0.00 0.00 2.52
1830 1907 2.231716 TGAGAGATTGTCCGGGAAGA 57.768 50.000 0.00 0.00 0.00 2.87
1831 1908 2.697751 AGATGAGAGATTGTCCGGGAAG 59.302 50.000 0.00 0.00 0.00 3.46
1832 1909 2.752030 AGATGAGAGATTGTCCGGGAA 58.248 47.619 0.00 0.00 0.00 3.97
1833 1910 2.432146 CAAGATGAGAGATTGTCCGGGA 59.568 50.000 0.00 0.00 0.00 5.14
1834 1911 2.169352 ACAAGATGAGAGATTGTCCGGG 59.831 50.000 0.00 0.00 31.72 5.73
1835 1912 3.193263 CACAAGATGAGAGATTGTCCGG 58.807 50.000 0.00 0.00 35.04 5.14
1836 1913 3.193263 CCACAAGATGAGAGATTGTCCG 58.807 50.000 0.00 0.00 35.04 4.79
1837 1914 4.213564 ACCACAAGATGAGAGATTGTCC 57.786 45.455 0.00 0.00 35.04 4.02
1838 1915 5.971763 ACTACCACAAGATGAGAGATTGTC 58.028 41.667 0.00 0.00 35.04 3.18
1839 1916 5.393569 CGACTACCACAAGATGAGAGATTGT 60.394 44.000 0.00 0.00 37.64 2.71
1840 1917 5.039984 CGACTACCACAAGATGAGAGATTG 58.960 45.833 0.00 0.00 0.00 2.67
1841 1918 4.707448 ACGACTACCACAAGATGAGAGATT 59.293 41.667 0.00 0.00 0.00 2.40
1842 1919 4.274147 ACGACTACCACAAGATGAGAGAT 58.726 43.478 0.00 0.00 0.00 2.75
1843 1920 3.687125 ACGACTACCACAAGATGAGAGA 58.313 45.455 0.00 0.00 0.00 3.10
1844 1921 4.082733 TCAACGACTACCACAAGATGAGAG 60.083 45.833 0.00 0.00 0.00 3.20
1845 1922 3.824443 TCAACGACTACCACAAGATGAGA 59.176 43.478 0.00 0.00 0.00 3.27
1846 1923 4.174411 TCAACGACTACCACAAGATGAG 57.826 45.455 0.00 0.00 0.00 2.90
1847 1924 4.038763 ACTTCAACGACTACCACAAGATGA 59.961 41.667 0.00 0.00 0.00 2.92
1848 1925 4.307432 ACTTCAACGACTACCACAAGATG 58.693 43.478 0.00 0.00 0.00 2.90
1849 1926 4.602340 ACTTCAACGACTACCACAAGAT 57.398 40.909 0.00 0.00 0.00 2.40
1850 1927 4.116961 CAACTTCAACGACTACCACAAGA 58.883 43.478 0.00 0.00 0.00 3.02
1851 1928 3.869246 ACAACTTCAACGACTACCACAAG 59.131 43.478 0.00 0.00 0.00 3.16
1852 1929 3.619483 CACAACTTCAACGACTACCACAA 59.381 43.478 0.00 0.00 0.00 3.33
1853 1930 3.191669 CACAACTTCAACGACTACCACA 58.808 45.455 0.00 0.00 0.00 4.17
1854 1931 3.000925 CACACAACTTCAACGACTACCAC 59.999 47.826 0.00 0.00 0.00 4.16
1855 1932 3.191669 CACACAACTTCAACGACTACCA 58.808 45.455 0.00 0.00 0.00 3.25
1856 1933 3.192466 ACACACAACTTCAACGACTACC 58.808 45.455 0.00 0.00 0.00 3.18
1857 1934 3.061403 CGACACACAACTTCAACGACTAC 60.061 47.826 0.00 0.00 0.00 2.73
1858 1935 3.110358 CGACACACAACTTCAACGACTA 58.890 45.455 0.00 0.00 0.00 2.59
1859 1936 1.924524 CGACACACAACTTCAACGACT 59.075 47.619 0.00 0.00 0.00 4.18
1860 1937 1.005347 CCGACACACAACTTCAACGAC 60.005 52.381 0.00 0.00 0.00 4.34
1861 1938 1.282817 CCGACACACAACTTCAACGA 58.717 50.000 0.00 0.00 0.00 3.85
1862 1939 1.003851 ACCGACACACAACTTCAACG 58.996 50.000 0.00 0.00 0.00 4.10
1863 1940 1.531058 GCACCGACACACAACTTCAAC 60.531 52.381 0.00 0.00 0.00 3.18
1864 1941 0.730265 GCACCGACACACAACTTCAA 59.270 50.000 0.00 0.00 0.00 2.69
1865 1942 1.092921 GGCACCGACACACAACTTCA 61.093 55.000 0.00 0.00 0.00 3.02
1866 1943 1.647084 GGCACCGACACACAACTTC 59.353 57.895 0.00 0.00 0.00 3.01
1867 1944 1.822186 GGGCACCGACACACAACTT 60.822 57.895 0.00 0.00 40.86 2.66
1868 1945 2.203153 GGGCACCGACACACAACT 60.203 61.111 0.00 0.00 40.86 3.16
1880 1957 0.388520 GAAACAAGAATGCCGGGCAC 60.389 55.000 26.48 13.10 43.04 5.01
1881 1958 0.539438 AGAAACAAGAATGCCGGGCA 60.539 50.000 26.11 26.11 44.86 5.36
1882 1959 0.603065 AAGAAACAAGAATGCCGGGC 59.397 50.000 13.32 13.32 0.00 6.13
1883 1960 1.669795 GCAAGAAACAAGAATGCCGGG 60.670 52.381 2.18 0.00 0.00 5.73
1884 1961 1.669795 GGCAAGAAACAAGAATGCCGG 60.670 52.381 0.00 0.00 46.11 6.13
1885 1962 1.701704 GGCAAGAAACAAGAATGCCG 58.298 50.000 0.00 0.00 46.11 5.69
1887 1964 3.062042 CCAAGGCAAGAAACAAGAATGC 58.938 45.455 0.00 0.00 36.31 3.56
1888 1965 3.070015 ACCCAAGGCAAGAAACAAGAATG 59.930 43.478 0.00 0.00 0.00 2.67
1889 1966 3.308401 ACCCAAGGCAAGAAACAAGAAT 58.692 40.909 0.00 0.00 0.00 2.40
1890 1967 2.745968 ACCCAAGGCAAGAAACAAGAA 58.254 42.857 0.00 0.00 0.00 2.52
1891 1968 2.430332 CAACCCAAGGCAAGAAACAAGA 59.570 45.455 0.00 0.00 0.00 3.02
1892 1969 2.168313 ACAACCCAAGGCAAGAAACAAG 59.832 45.455 0.00 0.00 0.00 3.16
1893 1970 2.093764 CACAACCCAAGGCAAGAAACAA 60.094 45.455 0.00 0.00 0.00 2.83
1894 1971 1.480137 CACAACCCAAGGCAAGAAACA 59.520 47.619 0.00 0.00 0.00 2.83
1895 1972 1.480545 ACACAACCCAAGGCAAGAAAC 59.519 47.619 0.00 0.00 0.00 2.78
1896 1973 1.480137 CACACAACCCAAGGCAAGAAA 59.520 47.619 0.00 0.00 0.00 2.52
1897 1974 1.110442 CACACAACCCAAGGCAAGAA 58.890 50.000 0.00 0.00 0.00 2.52
1898 1975 0.754957 CCACACAACCCAAGGCAAGA 60.755 55.000 0.00 0.00 0.00 3.02
1899 1976 1.741525 CCACACAACCCAAGGCAAG 59.258 57.895 0.00 0.00 0.00 4.01
1900 1977 2.430610 GCCACACAACCCAAGGCAA 61.431 57.895 0.00 0.00 44.59 4.52
1901 1978 2.837291 GCCACACAACCCAAGGCA 60.837 61.111 0.00 0.00 44.59 4.75
1902 1979 3.977244 CGCCACACAACCCAAGGC 61.977 66.667 0.00 0.00 41.86 4.35
1903 1980 2.518349 ACGCCACACAACCCAAGG 60.518 61.111 0.00 0.00 0.00 3.61
1904 1981 2.721231 CACGCCACACAACCCAAG 59.279 61.111 0.00 0.00 0.00 3.61
1905 1982 3.522731 GCACGCCACACAACCCAA 61.523 61.111 0.00 0.00 0.00 4.12
1908 1985 3.404141 AAACGCACGCCACACAACC 62.404 57.895 0.00 0.00 0.00 3.77
1909 1986 2.101380 AAACGCACGCCACACAAC 59.899 55.556 0.00 0.00 0.00 3.32
1910 1987 1.366854 TACAAACGCACGCCACACAA 61.367 50.000 0.00 0.00 0.00 3.33
1911 1988 1.160946 ATACAAACGCACGCCACACA 61.161 50.000 0.00 0.00 0.00 3.72
1912 1989 0.452122 GATACAAACGCACGCCACAC 60.452 55.000 0.00 0.00 0.00 3.82
1913 1990 1.863491 GATACAAACGCACGCCACA 59.137 52.632 0.00 0.00 0.00 4.17
1914 1991 1.225637 CGATACAAACGCACGCCAC 60.226 57.895 0.00 0.00 0.00 5.01
1915 1992 2.384309 CCGATACAAACGCACGCCA 61.384 57.895 0.00 0.00 0.00 5.69
1916 1993 1.903783 AACCGATACAAACGCACGCC 61.904 55.000 0.00 0.00 0.00 5.68
1917 1994 0.517742 GAACCGATACAAACGCACGC 60.518 55.000 0.00 0.00 0.00 5.34
1918 1995 1.065358 AGAACCGATACAAACGCACG 58.935 50.000 0.00 0.00 0.00 5.34
1919 1996 2.412325 CCAAGAACCGATACAAACGCAC 60.412 50.000 0.00 0.00 0.00 5.34
1920 1997 1.801771 CCAAGAACCGATACAAACGCA 59.198 47.619 0.00 0.00 0.00 5.24
1921 1998 2.070783 TCCAAGAACCGATACAAACGC 58.929 47.619 0.00 0.00 0.00 4.84
1922 1999 3.682858 ACATCCAAGAACCGATACAAACG 59.317 43.478 0.00 0.00 0.00 3.60
1923 2000 6.370718 ACTTACATCCAAGAACCGATACAAAC 59.629 38.462 0.00 0.00 0.00 2.93
1924 2001 6.370442 CACTTACATCCAAGAACCGATACAAA 59.630 38.462 0.00 0.00 0.00 2.83
1925 2002 5.872617 CACTTACATCCAAGAACCGATACAA 59.127 40.000 0.00 0.00 0.00 2.41
1926 2003 5.046878 ACACTTACATCCAAGAACCGATACA 60.047 40.000 0.00 0.00 0.00 2.29
1927 2004 5.416947 ACACTTACATCCAAGAACCGATAC 58.583 41.667 0.00 0.00 0.00 2.24
1928 2005 5.670792 ACACTTACATCCAAGAACCGATA 57.329 39.130 0.00 0.00 0.00 2.92
1929 2006 4.553330 ACACTTACATCCAAGAACCGAT 57.447 40.909 0.00 0.00 0.00 4.18
1930 2007 4.062293 CAACACTTACATCCAAGAACCGA 58.938 43.478 0.00 0.00 0.00 4.69
1931 2008 3.188460 CCAACACTTACATCCAAGAACCG 59.812 47.826 0.00 0.00 0.00 4.44
1932 2009 4.023193 CACCAACACTTACATCCAAGAACC 60.023 45.833 0.00 0.00 0.00 3.62
1933 2010 4.556699 GCACCAACACTTACATCCAAGAAC 60.557 45.833 0.00 0.00 0.00 3.01
1934 2011 3.568007 GCACCAACACTTACATCCAAGAA 59.432 43.478 0.00 0.00 0.00 2.52
1935 2012 3.146066 GCACCAACACTTACATCCAAGA 58.854 45.455 0.00 0.00 0.00 3.02
1936 2013 3.149196 AGCACCAACACTTACATCCAAG 58.851 45.455 0.00 0.00 0.00 3.61
1937 2014 3.222173 AGCACCAACACTTACATCCAA 57.778 42.857 0.00 0.00 0.00 3.53
1938 2015 2.949177 AGCACCAACACTTACATCCA 57.051 45.000 0.00 0.00 0.00 3.41
1939 2016 5.897377 ATAAAGCACCAACACTTACATCC 57.103 39.130 0.00 0.00 0.00 3.51
1974 2051 3.056393 CCATTACCGAAAAAGGGTTTCCC 60.056 47.826 0.00 0.00 45.90 3.97
1975 2052 3.827876 TCCATTACCGAAAAAGGGTTTCC 59.172 43.478 0.00 0.00 38.99 3.13
1976 2053 4.082408 CCTCCATTACCGAAAAAGGGTTTC 60.082 45.833 0.00 0.00 38.99 2.78
1977 2054 3.830178 CCTCCATTACCGAAAAAGGGTTT 59.170 43.478 0.00 0.00 38.99 3.27
1978 2055 3.427573 CCTCCATTACCGAAAAAGGGTT 58.572 45.455 0.00 0.00 38.99 4.11
1979 2056 2.291346 CCCTCCATTACCGAAAAAGGGT 60.291 50.000 0.00 0.00 41.62 4.34
1980 2057 2.375146 CCCTCCATTACCGAAAAAGGG 58.625 52.381 0.00 0.00 36.32 3.95
1981 2058 2.375146 CCCCTCCATTACCGAAAAAGG 58.625 52.381 0.00 0.00 37.30 3.11
1982 2059 2.291346 ACCCCCTCCATTACCGAAAAAG 60.291 50.000 0.00 0.00 0.00 2.27
1983 2060 1.711942 ACCCCCTCCATTACCGAAAAA 59.288 47.619 0.00 0.00 0.00 1.94
1984 2061 1.004979 CACCCCCTCCATTACCGAAAA 59.995 52.381 0.00 0.00 0.00 2.29
1985 2062 0.621609 CACCCCCTCCATTACCGAAA 59.378 55.000 0.00 0.00 0.00 3.46
1986 2063 1.276140 CCACCCCCTCCATTACCGAA 61.276 60.000 0.00 0.00 0.00 4.30
1987 2064 1.691337 CCACCCCCTCCATTACCGA 60.691 63.158 0.00 0.00 0.00 4.69
1988 2065 2.752807 CCCACCCCCTCCATTACCG 61.753 68.421 0.00 0.00 0.00 4.02
1989 2066 1.621514 ACCCACCCCCTCCATTACC 60.622 63.158 0.00 0.00 0.00 2.85
1990 2067 1.613061 CACCCACCCCCTCCATTAC 59.387 63.158 0.00 0.00 0.00 1.89
1991 2068 2.313427 GCACCCACCCCCTCCATTA 61.313 63.158 0.00 0.00 0.00 1.90
1992 2069 3.672503 GCACCCACCCCCTCCATT 61.673 66.667 0.00 0.00 0.00 3.16
2037 2114 1.229177 GCCCCCAGAACCCACAATT 60.229 57.895 0.00 0.00 0.00 2.32
2303 2400 6.294473 ACTGAATAGATGTGGACATTGATCC 58.706 40.000 0.00 0.00 36.57 3.36
2494 2619 1.963515 CCCCTGAAACCAAAACCAGAG 59.036 52.381 0.00 0.00 0.00 3.35
2656 2824 2.564947 AGAACGTGAGCTTCAGGAATCT 59.435 45.455 11.20 10.57 35.94 2.40
2776 2944 6.351286 GCACCCTTTATTTCCTCAATGAACAT 60.351 38.462 0.00 0.00 0.00 2.71
3723 3897 8.818057 ACGAATCTTATGTTGTAGCACTAATTC 58.182 33.333 0.00 0.00 0.00 2.17
3824 3998 4.469586 TCAGCATACCCAAATACACTGAGA 59.530 41.667 0.00 0.00 0.00 3.27
3831 4005 5.506317 GCATCTGTTCAGCATACCCAAATAC 60.506 44.000 0.00 0.00 0.00 1.89
3998 4178 4.467795 TGCTGTAGTTCTCCTAATTGCTCT 59.532 41.667 0.00 0.00 0.00 4.09
4299 4479 2.924290 GTTTACAGAGCGATGAGACCAC 59.076 50.000 0.00 0.00 0.00 4.16
4409 4589 3.766051 GGAACCAAGAATCCAGCAAGAAT 59.234 43.478 0.00 0.00 35.71 2.40
5034 5241 1.140312 TTATGCAGCCTAAGGGAGGG 58.860 55.000 0.00 0.00 46.81 4.30
5063 5274 3.823873 TGTGTAATTTGCTCCACGGAAAT 59.176 39.130 0.00 0.00 44.30 2.17
5069 5280 4.398988 TGATCCATGTGTAATTTGCTCCAC 59.601 41.667 0.00 0.00 0.00 4.02
5131 6530 6.477033 CAGATACATACTTGAACCAGCAGTAC 59.523 42.308 0.00 0.00 0.00 2.73
5152 6551 7.472334 AAATATGCAAGTTTGGAGTTCAGAT 57.528 32.000 0.00 0.00 30.13 2.90
5214 6613 3.086282 GGGACAAAATGTTGGTACCGAT 58.914 45.455 4.77 0.00 39.22 4.18
5235 6634 1.802636 GGTGGCATCGGTGAACATG 59.197 57.895 0.00 0.00 0.00 3.21
5307 6706 4.841246 ACCTCCAGTCTATAATGGGTGATC 59.159 45.833 0.00 0.00 37.19 2.92
5345 6744 0.247460 TCCCATGCTCGTCAGAACAG 59.753 55.000 0.00 0.00 0.00 3.16
5399 6798 5.418840 TCATAGGAAACAGGAAAATGGAAGC 59.581 40.000 0.00 0.00 0.00 3.86
5411 6810 7.798596 ACTTTCTATGCATCATAGGAAACAG 57.201 36.000 0.19 0.00 40.24 3.16
5459 6858 8.554835 AACTAAGAGCCTTCTTTTATTCACTC 57.445 34.615 0.00 0.00 40.79 3.51
5624 7025 5.633830 ATTGACAAGTGTTTATGCTCAGG 57.366 39.130 0.00 0.00 0.00 3.86
5786 11110 3.297134 TGTTCCTTTGCTTCCTTCTGT 57.703 42.857 0.00 0.00 0.00 3.41
5809 11133 6.127281 CCATGATTCATCACCTGGAAATTCAA 60.127 38.462 0.00 0.00 38.59 2.69
5868 11194 0.106819 CTGATTGCCTGGAGGAAGGG 60.107 60.000 0.00 0.00 37.84 3.95
5869 11195 0.750911 GCTGATTGCCTGGAGGAAGG 60.751 60.000 0.00 0.00 40.63 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.