Multiple sequence alignment - TraesCS5B01G092800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G092800 chr5B 100.000 2549 0 0 1 2549 121671517 121668969 0.000000e+00 4708.0
1 TraesCS5B01G092800 chr5B 98.030 1980 37 1 572 2549 206051426 206049447 0.000000e+00 3439.0
2 TraesCS5B01G092800 chr6B 98.144 1993 32 4 560 2549 660437756 660435766 0.000000e+00 3470.0
3 TraesCS5B01G092800 chr7A 98.234 1982 32 2 571 2549 701581939 701583920 0.000000e+00 3463.0
4 TraesCS5B01G092800 chr6A 98.373 1967 30 2 573 2537 617222869 617220903 0.000000e+00 3454.0
5 TraesCS5B01G092800 chr7B 98.133 1982 33 2 572 2549 552932144 552930163 0.000000e+00 3452.0
6 TraesCS5B01G092800 chr7B 97.648 1998 44 2 555 2549 1776649 1774652 0.000000e+00 3426.0
7 TraesCS5B01G092800 chr5A 98.132 1981 35 2 571 2549 459744879 459746859 0.000000e+00 3452.0
8 TraesCS5B01G092800 chr5A 91.435 432 26 6 1 430 115662058 115661636 1.310000e-162 582.0
9 TraesCS5B01G092800 chr5A 87.591 137 13 2 426 562 115634208 115634076 3.400000e-34 156.0
10 TraesCS5B01G092800 chr2B 98.130 1979 34 3 571 2549 25861470 25863445 0.000000e+00 3446.0
11 TraesCS5B01G092800 chr1A 98.129 1978 35 2 573 2549 22791529 22793505 0.000000e+00 3446.0
12 TraesCS5B01G092800 chr5D 93.651 63 4 0 508 570 111609965 111610027 7.510000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G092800 chr5B 121668969 121671517 2548 True 4708 4708 100.000 1 2549 1 chr5B.!!$R1 2548
1 TraesCS5B01G092800 chr5B 206049447 206051426 1979 True 3439 3439 98.030 572 2549 1 chr5B.!!$R2 1977
2 TraesCS5B01G092800 chr6B 660435766 660437756 1990 True 3470 3470 98.144 560 2549 1 chr6B.!!$R1 1989
3 TraesCS5B01G092800 chr7A 701581939 701583920 1981 False 3463 3463 98.234 571 2549 1 chr7A.!!$F1 1978
4 TraesCS5B01G092800 chr6A 617220903 617222869 1966 True 3454 3454 98.373 573 2537 1 chr6A.!!$R1 1964
5 TraesCS5B01G092800 chr7B 552930163 552932144 1981 True 3452 3452 98.133 572 2549 1 chr7B.!!$R2 1977
6 TraesCS5B01G092800 chr7B 1774652 1776649 1997 True 3426 3426 97.648 555 2549 1 chr7B.!!$R1 1994
7 TraesCS5B01G092800 chr5A 459744879 459746859 1980 False 3452 3452 98.132 571 2549 1 chr5A.!!$F1 1978
8 TraesCS5B01G092800 chr2B 25861470 25863445 1975 False 3446 3446 98.130 571 2549 1 chr2B.!!$F1 1978
9 TraesCS5B01G092800 chr1A 22791529 22793505 1976 False 3446 3446 98.129 573 2549 1 chr1A.!!$F1 1976

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
438 439 0.035439 TCTTTGCCTCCCAACGATCC 60.035 55.0 0.0 0.0 31.97 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2210 2215 1.020437 GTCCTAGCGGTTACTAGCGT 58.98 55.0 0.0 0.0 46.45 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.803452 AGAGGAAGAATGAGAGACCTAGG 58.197 47.826 7.41 7.41 0.00 3.02
24 25 3.895041 GAGGAAGAATGAGAGACCTAGGG 59.105 52.174 14.81 0.00 0.00 3.53
25 26 2.969262 GGAAGAATGAGAGACCTAGGGG 59.031 54.545 14.81 0.00 38.88 4.79
26 27 2.785357 AGAATGAGAGACCTAGGGGG 57.215 55.000 14.81 0.00 41.89 5.40
41 42 2.203070 GGGGAGTACGCCATGCTG 60.203 66.667 17.99 0.00 46.50 4.41
42 43 2.897350 GGGAGTACGCCATGCTGC 60.897 66.667 17.99 0.00 0.00 5.25
43 44 2.897350 GGAGTACGCCATGCTGCC 60.897 66.667 11.20 0.00 0.00 4.85
44 45 2.125147 GAGTACGCCATGCTGCCA 60.125 61.111 0.00 0.00 0.00 4.92
45 46 1.524621 GAGTACGCCATGCTGCCAT 60.525 57.895 0.00 0.00 0.00 4.40
46 47 1.077501 AGTACGCCATGCTGCCATT 60.078 52.632 0.00 0.00 0.00 3.16
47 48 1.064621 GTACGCCATGCTGCCATTG 59.935 57.895 0.00 0.00 0.00 2.82
48 49 1.378382 TACGCCATGCTGCCATTGT 60.378 52.632 0.00 0.00 0.00 2.71
49 50 1.375853 TACGCCATGCTGCCATTGTC 61.376 55.000 0.00 0.00 0.00 3.18
50 51 2.702788 CGCCATGCTGCCATTGTCA 61.703 57.895 0.00 0.00 0.00 3.58
51 52 1.820581 GCCATGCTGCCATTGTCAT 59.179 52.632 0.00 0.00 0.00 3.06
52 53 0.177141 GCCATGCTGCCATTGTCATT 59.823 50.000 0.00 0.00 0.00 2.57
53 54 1.406341 GCCATGCTGCCATTGTCATTT 60.406 47.619 0.00 0.00 0.00 2.32
54 55 2.937873 GCCATGCTGCCATTGTCATTTT 60.938 45.455 0.00 0.00 0.00 1.82
55 56 3.340034 CCATGCTGCCATTGTCATTTTT 58.660 40.909 0.00 0.00 0.00 1.94
56 57 3.372822 CCATGCTGCCATTGTCATTTTTC 59.627 43.478 0.00 0.00 0.00 2.29
57 58 4.250464 CATGCTGCCATTGTCATTTTTCT 58.750 39.130 0.00 0.00 0.00 2.52
58 59 3.655486 TGCTGCCATTGTCATTTTTCTG 58.345 40.909 0.00 0.00 0.00 3.02
59 60 3.069872 TGCTGCCATTGTCATTTTTCTGT 59.930 39.130 0.00 0.00 0.00 3.41
60 61 4.060205 GCTGCCATTGTCATTTTTCTGTT 58.940 39.130 0.00 0.00 0.00 3.16
61 62 4.084223 GCTGCCATTGTCATTTTTCTGTTG 60.084 41.667 0.00 0.00 0.00 3.33
62 63 3.808726 TGCCATTGTCATTTTTCTGTTGC 59.191 39.130 0.00 0.00 0.00 4.17
63 64 4.060205 GCCATTGTCATTTTTCTGTTGCT 58.940 39.130 0.00 0.00 0.00 3.91
64 65 4.151157 GCCATTGTCATTTTTCTGTTGCTC 59.849 41.667 0.00 0.00 0.00 4.26
65 66 5.535333 CCATTGTCATTTTTCTGTTGCTCT 58.465 37.500 0.00 0.00 0.00 4.09
66 67 5.987347 CCATTGTCATTTTTCTGTTGCTCTT 59.013 36.000 0.00 0.00 0.00 2.85
67 68 6.073980 CCATTGTCATTTTTCTGTTGCTCTTG 60.074 38.462 0.00 0.00 0.00 3.02
68 69 4.362279 TGTCATTTTTCTGTTGCTCTTGC 58.638 39.130 0.00 0.00 40.20 4.01
69 70 3.423206 GTCATTTTTCTGTTGCTCTTGCG 59.577 43.478 0.00 0.00 43.34 4.85
70 71 3.066621 TCATTTTTCTGTTGCTCTTGCGT 59.933 39.130 0.00 0.00 43.34 5.24
71 72 2.473530 TTTTCTGTTGCTCTTGCGTG 57.526 45.000 0.00 0.00 43.34 5.34
72 73 1.662517 TTTCTGTTGCTCTTGCGTGA 58.337 45.000 0.00 0.00 43.34 4.35
73 74 1.220529 TTCTGTTGCTCTTGCGTGAG 58.779 50.000 1.89 1.89 43.34 3.51
74 75 0.389025 TCTGTTGCTCTTGCGTGAGA 59.611 50.000 9.56 0.00 43.34 3.27
75 76 1.202521 TCTGTTGCTCTTGCGTGAGAA 60.203 47.619 9.56 0.00 43.34 2.87
76 77 1.194098 CTGTTGCTCTTGCGTGAGAAG 59.806 52.381 9.56 0.00 43.34 2.85
77 78 1.202521 TGTTGCTCTTGCGTGAGAAGA 60.203 47.619 9.56 0.00 43.34 2.87
78 79 1.867233 GTTGCTCTTGCGTGAGAAGAA 59.133 47.619 9.56 0.00 43.34 2.52
79 80 1.788258 TGCTCTTGCGTGAGAAGAAG 58.212 50.000 9.56 0.00 43.34 2.85
80 81 1.341209 TGCTCTTGCGTGAGAAGAAGA 59.659 47.619 9.56 0.00 43.34 2.87
81 82 2.224042 TGCTCTTGCGTGAGAAGAAGAA 60.224 45.455 9.56 0.00 43.34 2.52
82 83 2.411409 GCTCTTGCGTGAGAAGAAGAAG 59.589 50.000 9.56 0.00 36.23 2.85
83 84 3.858877 GCTCTTGCGTGAGAAGAAGAAGA 60.859 47.826 9.56 0.00 36.23 2.87
84 85 4.493547 CTCTTGCGTGAGAAGAAGAAGAT 58.506 43.478 0.04 0.00 36.23 2.40
85 86 4.489810 TCTTGCGTGAGAAGAAGAAGATC 58.510 43.478 0.00 0.00 0.00 2.75
86 87 3.942130 TGCGTGAGAAGAAGAAGATCA 57.058 42.857 0.00 0.00 0.00 2.92
87 88 4.257267 TGCGTGAGAAGAAGAAGATCAA 57.743 40.909 0.00 0.00 0.00 2.57
88 89 4.631131 TGCGTGAGAAGAAGAAGATCAAA 58.369 39.130 0.00 0.00 0.00 2.69
89 90 4.687948 TGCGTGAGAAGAAGAAGATCAAAG 59.312 41.667 0.00 0.00 0.00 2.77
90 91 4.688413 GCGTGAGAAGAAGAAGATCAAAGT 59.312 41.667 0.00 0.00 0.00 2.66
91 92 5.864474 GCGTGAGAAGAAGAAGATCAAAGTA 59.136 40.000 0.00 0.00 0.00 2.24
92 93 6.366332 GCGTGAGAAGAAGAAGATCAAAGTAA 59.634 38.462 0.00 0.00 0.00 2.24
93 94 7.095607 GCGTGAGAAGAAGAAGATCAAAGTAAA 60.096 37.037 0.00 0.00 0.00 2.01
94 95 8.765219 CGTGAGAAGAAGAAGATCAAAGTAAAA 58.235 33.333 0.00 0.00 0.00 1.52
95 96 9.871299 GTGAGAAGAAGAAGATCAAAGTAAAAC 57.129 33.333 0.00 0.00 0.00 2.43
96 97 9.613428 TGAGAAGAAGAAGATCAAAGTAAAACA 57.387 29.630 0.00 0.00 0.00 2.83
97 98 9.871299 GAGAAGAAGAAGATCAAAGTAAAACAC 57.129 33.333 0.00 0.00 0.00 3.32
98 99 9.396022 AGAAGAAGAAGATCAAAGTAAAACACA 57.604 29.630 0.00 0.00 0.00 3.72
101 102 9.178758 AGAAGAAGATCAAAGTAAAACACAAGT 57.821 29.630 0.00 0.00 0.00 3.16
106 107 9.498307 AAGATCAAAGTAAAACACAAGTAAACG 57.502 29.630 0.00 0.00 0.00 3.60
107 108 8.885722 AGATCAAAGTAAAACACAAGTAAACGA 58.114 29.630 0.00 0.00 0.00 3.85
108 109 9.155053 GATCAAAGTAAAACACAAGTAAACGAG 57.845 33.333 0.00 0.00 0.00 4.18
109 110 6.962678 TCAAAGTAAAACACAAGTAAACGAGC 59.037 34.615 0.00 0.00 0.00 5.03
110 111 6.673154 AAGTAAAACACAAGTAAACGAGCT 57.327 33.333 0.00 0.00 0.00 4.09
111 112 7.775397 AAGTAAAACACAAGTAAACGAGCTA 57.225 32.000 0.00 0.00 0.00 3.32
112 113 7.404139 AGTAAAACACAAGTAAACGAGCTAG 57.596 36.000 0.00 0.00 0.00 3.42
113 114 5.668558 AAAACACAAGTAAACGAGCTAGG 57.331 39.130 0.00 0.00 0.00 3.02
114 115 3.314541 ACACAAGTAAACGAGCTAGGG 57.685 47.619 0.00 0.00 0.00 3.53
115 116 2.631545 ACACAAGTAAACGAGCTAGGGT 59.368 45.455 0.00 0.00 0.00 4.34
116 117 3.070590 ACACAAGTAAACGAGCTAGGGTT 59.929 43.478 0.00 0.00 0.00 4.11
117 118 4.281688 ACACAAGTAAACGAGCTAGGGTTA 59.718 41.667 0.00 0.00 0.00 2.85
118 119 5.046807 ACACAAGTAAACGAGCTAGGGTTAT 60.047 40.000 0.00 0.00 0.00 1.89
119 120 6.153340 ACACAAGTAAACGAGCTAGGGTTATA 59.847 38.462 0.00 0.00 0.00 0.98
120 121 7.037438 CACAAGTAAACGAGCTAGGGTTATAA 58.963 38.462 0.00 0.00 0.00 0.98
121 122 7.009907 CACAAGTAAACGAGCTAGGGTTATAAC 59.990 40.741 7.09 7.09 0.00 1.89
122 123 7.093596 ACAAGTAAACGAGCTAGGGTTATAACT 60.094 37.037 15.05 0.00 0.00 2.24
123 124 6.803642 AGTAAACGAGCTAGGGTTATAACTG 58.196 40.000 15.05 5.16 0.00 3.16
124 125 5.927281 AAACGAGCTAGGGTTATAACTGA 57.073 39.130 15.05 0.82 0.00 3.41
125 126 5.517322 AACGAGCTAGGGTTATAACTGAG 57.483 43.478 15.05 10.54 0.00 3.35
126 127 4.789807 ACGAGCTAGGGTTATAACTGAGA 58.210 43.478 15.05 0.00 0.00 3.27
127 128 4.579753 ACGAGCTAGGGTTATAACTGAGAC 59.420 45.833 15.05 3.51 0.00 3.36
128 129 4.822896 CGAGCTAGGGTTATAACTGAGACT 59.177 45.833 15.05 7.88 0.00 3.24
129 130 5.049267 CGAGCTAGGGTTATAACTGAGACTC 60.049 48.000 15.05 14.19 0.00 3.36
130 131 5.141910 AGCTAGGGTTATAACTGAGACTCC 58.858 45.833 15.05 6.19 0.00 3.85
131 132 4.023021 GCTAGGGTTATAACTGAGACTCCG 60.023 50.000 15.05 0.00 0.00 4.63
132 133 4.246712 AGGGTTATAACTGAGACTCCGA 57.753 45.455 15.05 0.00 0.00 4.55
133 134 3.952967 AGGGTTATAACTGAGACTCCGAC 59.047 47.826 15.05 0.00 0.00 4.79
134 135 3.952967 GGGTTATAACTGAGACTCCGACT 59.047 47.826 15.05 0.00 0.00 4.18
135 136 4.036616 GGGTTATAACTGAGACTCCGACTC 59.963 50.000 15.05 0.00 35.26 3.36
136 137 4.260702 GGTTATAACTGAGACTCCGACTCG 60.261 50.000 15.05 0.00 37.22 4.18
137 138 2.469274 TAACTGAGACTCCGACTCGT 57.531 50.000 0.00 0.00 37.22 4.18
138 139 1.606903 AACTGAGACTCCGACTCGTT 58.393 50.000 0.00 0.00 37.22 3.85
139 140 2.469274 ACTGAGACTCCGACTCGTTA 57.531 50.000 0.00 0.00 37.22 3.18
140 141 2.075338 ACTGAGACTCCGACTCGTTAC 58.925 52.381 0.00 0.00 37.22 2.50
141 142 1.397692 CTGAGACTCCGACTCGTTACC 59.602 57.143 0.00 0.00 37.22 2.85
142 143 1.002888 TGAGACTCCGACTCGTTACCT 59.997 52.381 0.00 0.00 37.22 3.08
143 144 2.234661 TGAGACTCCGACTCGTTACCTA 59.765 50.000 0.00 0.00 37.22 3.08
144 145 2.865551 GAGACTCCGACTCGTTACCTAG 59.134 54.545 0.00 0.00 0.00 3.02
145 146 2.499289 AGACTCCGACTCGTTACCTAGA 59.501 50.000 0.00 0.00 0.00 2.43
146 147 3.134442 AGACTCCGACTCGTTACCTAGAT 59.866 47.826 0.00 0.00 0.00 1.98
147 148 4.343526 AGACTCCGACTCGTTACCTAGATA 59.656 45.833 0.00 0.00 0.00 1.98
148 149 4.376146 ACTCCGACTCGTTACCTAGATAC 58.624 47.826 0.00 0.00 0.00 2.24
149 150 4.100808 ACTCCGACTCGTTACCTAGATACT 59.899 45.833 0.00 0.00 0.00 2.12
150 151 4.626042 TCCGACTCGTTACCTAGATACTC 58.374 47.826 0.00 0.00 0.00 2.59
151 152 4.343526 TCCGACTCGTTACCTAGATACTCT 59.656 45.833 0.00 0.00 0.00 3.24
152 153 5.536538 TCCGACTCGTTACCTAGATACTCTA 59.463 44.000 0.00 0.00 0.00 2.43
153 154 5.863397 CCGACTCGTTACCTAGATACTCTAG 59.137 48.000 4.51 4.51 44.62 2.43
172 173 1.739667 GTGGAACCCAAGTGCAACC 59.260 57.895 0.00 0.00 37.80 3.77
173 174 1.040339 GTGGAACCCAAGTGCAACCA 61.040 55.000 0.00 0.00 37.80 3.67
174 175 0.754957 TGGAACCCAAGTGCAACCAG 60.755 55.000 0.00 0.00 37.80 4.00
175 176 0.467290 GGAACCCAAGTGCAACCAGA 60.467 55.000 0.00 0.00 37.80 3.86
176 177 0.954452 GAACCCAAGTGCAACCAGAG 59.046 55.000 0.00 0.00 37.80 3.35
177 178 0.258774 AACCCAAGTGCAACCAGAGT 59.741 50.000 0.00 0.00 37.80 3.24
178 179 1.136828 ACCCAAGTGCAACCAGAGTA 58.863 50.000 0.00 0.00 37.80 2.59
179 180 1.493022 ACCCAAGTGCAACCAGAGTAA 59.507 47.619 0.00 0.00 37.80 2.24
180 181 1.880027 CCCAAGTGCAACCAGAGTAAC 59.120 52.381 0.00 0.00 37.80 2.50
181 182 2.571212 CCAAGTGCAACCAGAGTAACA 58.429 47.619 0.00 0.00 37.80 2.41
182 183 2.549754 CCAAGTGCAACCAGAGTAACAG 59.450 50.000 0.00 0.00 37.80 3.16
183 184 3.466836 CAAGTGCAACCAGAGTAACAGA 58.533 45.455 0.00 0.00 37.80 3.41
184 185 4.067896 CAAGTGCAACCAGAGTAACAGAT 58.932 43.478 0.00 0.00 37.80 2.90
185 186 5.237815 CAAGTGCAACCAGAGTAACAGATA 58.762 41.667 0.00 0.00 37.80 1.98
186 187 5.078411 AGTGCAACCAGAGTAACAGATAG 57.922 43.478 0.00 0.00 37.80 2.08
187 188 4.772624 AGTGCAACCAGAGTAACAGATAGA 59.227 41.667 0.00 0.00 37.80 1.98
188 189 5.423610 AGTGCAACCAGAGTAACAGATAGAT 59.576 40.000 0.00 0.00 37.80 1.98
189 190 6.607600 AGTGCAACCAGAGTAACAGATAGATA 59.392 38.462 0.00 0.00 37.80 1.98
190 191 6.697892 GTGCAACCAGAGTAACAGATAGATAC 59.302 42.308 0.00 0.00 0.00 2.24
191 192 6.607600 TGCAACCAGAGTAACAGATAGATACT 59.392 38.462 0.00 0.00 38.40 2.12
192 193 7.142680 GCAACCAGAGTAACAGATAGATACTC 58.857 42.308 4.43 4.43 47.00 2.59
198 199 7.141100 GAGTAACAGATAGATACTCTGGCTC 57.859 44.000 5.41 5.92 44.67 4.70
199 200 6.848069 AGTAACAGATAGATACTCTGGCTCT 58.152 40.000 5.41 0.00 43.58 4.09
200 201 6.714810 AGTAACAGATAGATACTCTGGCTCTG 59.285 42.308 5.41 0.00 43.58 3.35
201 202 5.317600 ACAGATAGATACTCTGGCTCTGA 57.682 43.478 14.67 0.00 43.58 3.27
202 203 5.070001 ACAGATAGATACTCTGGCTCTGAC 58.930 45.833 14.67 0.00 43.58 3.51
203 204 4.458989 CAGATAGATACTCTGGCTCTGACC 59.541 50.000 0.00 0.00 37.15 4.02
204 205 2.080654 AGATACTCTGGCTCTGACCC 57.919 55.000 0.00 0.00 0.00 4.46
205 206 0.671251 GATACTCTGGCTCTGACCCG 59.329 60.000 0.00 0.00 0.00 5.28
206 207 0.259065 ATACTCTGGCTCTGACCCGA 59.741 55.000 0.00 0.00 0.00 5.14
207 208 0.394488 TACTCTGGCTCTGACCCGAG 60.394 60.000 12.57 12.57 32.80 4.63
208 209 1.379176 CTCTGGCTCTGACCCGAGA 60.379 63.158 10.13 3.01 32.74 4.04
209 210 1.379176 TCTGGCTCTGACCCGAGAG 60.379 63.158 0.00 0.00 42.24 3.20
227 228 5.517904 CGAGAGGGGTTATAGTAAAACTCG 58.482 45.833 0.00 0.00 37.69 4.18
228 229 5.297776 CGAGAGGGGTTATAGTAAAACTCGA 59.702 44.000 0.00 0.00 43.57 4.04
229 230 6.183360 CGAGAGGGGTTATAGTAAAACTCGAA 60.183 42.308 0.00 0.00 43.57 3.71
230 231 6.871844 AGAGGGGTTATAGTAAAACTCGAAC 58.128 40.000 0.00 0.00 0.00 3.95
231 232 6.438425 AGAGGGGTTATAGTAAAACTCGAACA 59.562 38.462 0.00 0.00 29.41 3.18
232 233 6.401394 AGGGGTTATAGTAAAACTCGAACAC 58.599 40.000 0.00 3.38 30.03 3.32
233 234 6.212187 AGGGGTTATAGTAAAACTCGAACACT 59.788 38.462 6.34 0.00 31.00 3.55
234 235 6.533012 GGGGTTATAGTAAAACTCGAACACTC 59.467 42.308 6.34 0.00 31.00 3.51
235 236 7.318893 GGGTTATAGTAAAACTCGAACACTCT 58.681 38.462 0.00 0.00 28.94 3.24
236 237 7.275123 GGGTTATAGTAAAACTCGAACACTCTG 59.725 40.741 0.00 0.00 28.94 3.35
237 238 8.025445 GGTTATAGTAAAACTCGAACACTCTGA 58.975 37.037 0.00 0.00 29.41 3.27
238 239 8.848528 GTTATAGTAAAACTCGAACACTCTGAC 58.151 37.037 0.00 0.00 0.00 3.51
239 240 5.517322 AGTAAAACTCGAACACTCTGACT 57.483 39.130 0.00 0.00 0.00 3.41
240 241 6.630444 AGTAAAACTCGAACACTCTGACTA 57.370 37.500 0.00 0.00 0.00 2.59
241 242 6.437094 AGTAAAACTCGAACACTCTGACTAC 58.563 40.000 0.00 0.00 0.00 2.73
242 243 4.913335 AAACTCGAACACTCTGACTACA 57.087 40.909 0.00 0.00 0.00 2.74
243 244 4.913335 AACTCGAACACTCTGACTACAA 57.087 40.909 0.00 0.00 0.00 2.41
244 245 4.913335 ACTCGAACACTCTGACTACAAA 57.087 40.909 0.00 0.00 0.00 2.83
245 246 5.258456 ACTCGAACACTCTGACTACAAAA 57.742 39.130 0.00 0.00 0.00 2.44
246 247 5.657474 ACTCGAACACTCTGACTACAAAAA 58.343 37.500 0.00 0.00 0.00 1.94
247 248 5.749109 ACTCGAACACTCTGACTACAAAAAG 59.251 40.000 0.00 0.00 0.00 2.27
248 249 5.898174 TCGAACACTCTGACTACAAAAAGA 58.102 37.500 0.00 0.00 0.00 2.52
249 250 6.334989 TCGAACACTCTGACTACAAAAAGAA 58.665 36.000 0.00 0.00 0.00 2.52
250 251 6.255020 TCGAACACTCTGACTACAAAAAGAAC 59.745 38.462 0.00 0.00 0.00 3.01
251 252 6.035650 CGAACACTCTGACTACAAAAAGAACA 59.964 38.462 0.00 0.00 0.00 3.18
252 253 6.663944 ACACTCTGACTACAAAAAGAACAC 57.336 37.500 0.00 0.00 0.00 3.32
253 254 5.291128 ACACTCTGACTACAAAAAGAACACG 59.709 40.000 0.00 0.00 0.00 4.49
254 255 4.270325 ACTCTGACTACAAAAAGAACACGC 59.730 41.667 0.00 0.00 0.00 5.34
255 256 4.439057 TCTGACTACAAAAAGAACACGCT 58.561 39.130 0.00 0.00 0.00 5.07
256 257 4.506654 TCTGACTACAAAAAGAACACGCTC 59.493 41.667 0.00 0.00 0.00 5.03
257 258 3.558418 TGACTACAAAAAGAACACGCTCC 59.442 43.478 0.00 0.00 0.00 4.70
258 259 3.537580 ACTACAAAAAGAACACGCTCCA 58.462 40.909 0.00 0.00 0.00 3.86
259 260 4.134563 ACTACAAAAAGAACACGCTCCAT 58.865 39.130 0.00 0.00 0.00 3.41
260 261 5.302360 ACTACAAAAAGAACACGCTCCATA 58.698 37.500 0.00 0.00 0.00 2.74
261 262 5.761234 ACTACAAAAAGAACACGCTCCATAA 59.239 36.000 0.00 0.00 0.00 1.90
262 263 4.855531 ACAAAAAGAACACGCTCCATAAC 58.144 39.130 0.00 0.00 0.00 1.89
263 264 4.226761 CAAAAAGAACACGCTCCATAACC 58.773 43.478 0.00 0.00 0.00 2.85
264 265 2.851263 AAGAACACGCTCCATAACCA 57.149 45.000 0.00 0.00 0.00 3.67
265 266 2.094762 AGAACACGCTCCATAACCAC 57.905 50.000 0.00 0.00 0.00 4.16
266 267 1.346395 AGAACACGCTCCATAACCACA 59.654 47.619 0.00 0.00 0.00 4.17
267 268 1.732259 GAACACGCTCCATAACCACAG 59.268 52.381 0.00 0.00 0.00 3.66
268 269 0.673644 ACACGCTCCATAACCACAGC 60.674 55.000 0.00 0.00 0.00 4.40
269 270 0.391661 CACGCTCCATAACCACAGCT 60.392 55.000 0.00 0.00 0.00 4.24
270 271 1.134818 CACGCTCCATAACCACAGCTA 60.135 52.381 0.00 0.00 0.00 3.32
271 272 1.137086 ACGCTCCATAACCACAGCTAG 59.863 52.381 0.00 0.00 0.00 3.42
272 273 1.587547 GCTCCATAACCACAGCTAGC 58.412 55.000 6.62 6.62 0.00 3.42
273 274 1.139853 GCTCCATAACCACAGCTAGCT 59.860 52.381 12.68 12.68 0.00 3.32
274 275 2.365617 GCTCCATAACCACAGCTAGCTA 59.634 50.000 18.86 0.00 0.00 3.32
275 276 3.553922 GCTCCATAACCACAGCTAGCTAG 60.554 52.174 18.86 16.84 0.00 3.42
284 285 4.167597 GCTAGCTAGCCGGAGACT 57.832 61.111 31.67 0.00 43.39 3.24
285 286 1.953772 GCTAGCTAGCCGGAGACTC 59.046 63.158 31.67 4.05 43.39 3.36
286 287 1.520600 GCTAGCTAGCCGGAGACTCC 61.521 65.000 31.67 11.87 43.39 3.85
287 288 0.109723 CTAGCTAGCCGGAGACTCCT 59.890 60.000 19.39 3.45 33.30 3.69
288 289 0.179015 TAGCTAGCCGGAGACTCCTG 60.179 60.000 19.39 13.98 33.30 3.86
289 290 3.124686 CTAGCCGGAGACTCCTGC 58.875 66.667 25.81 25.81 45.65 4.85
292 293 3.071206 GCCGGAGACTCCTGCTGA 61.071 66.667 25.85 0.00 42.56 4.26
293 294 2.650116 GCCGGAGACTCCTGCTGAA 61.650 63.158 25.85 0.00 42.56 3.02
294 295 1.975327 CCGGAGACTCCTGCTGAAA 59.025 57.895 19.39 0.00 33.30 2.69
295 296 0.539051 CCGGAGACTCCTGCTGAAAT 59.461 55.000 19.39 0.00 33.30 2.17
296 297 1.757118 CCGGAGACTCCTGCTGAAATA 59.243 52.381 19.39 0.00 33.30 1.40
297 298 2.223923 CCGGAGACTCCTGCTGAAATAG 60.224 54.545 19.39 0.00 33.30 1.73
312 313 5.486526 CTGAAATAGCTTGAAGACTCTGGT 58.513 41.667 0.00 0.00 0.00 4.00
313 314 5.482908 TGAAATAGCTTGAAGACTCTGGTC 58.517 41.667 0.00 0.00 42.41 4.02
314 315 3.791973 ATAGCTTGAAGACTCTGGTCG 57.208 47.619 0.00 0.00 46.29 4.79
315 316 1.621992 AGCTTGAAGACTCTGGTCGA 58.378 50.000 0.00 0.00 46.29 4.20
316 317 1.271102 AGCTTGAAGACTCTGGTCGAC 59.729 52.381 7.13 7.13 46.29 4.20
317 318 1.271102 GCTTGAAGACTCTGGTCGACT 59.729 52.381 16.46 0.00 46.29 4.18
318 319 2.669950 GCTTGAAGACTCTGGTCGACTC 60.670 54.545 16.46 4.48 46.29 3.36
319 320 2.271944 TGAAGACTCTGGTCGACTCA 57.728 50.000 16.46 10.78 46.29 3.41
320 321 2.155279 TGAAGACTCTGGTCGACTCAG 58.845 52.381 21.24 21.24 46.29 3.35
321 322 2.224548 TGAAGACTCTGGTCGACTCAGA 60.225 50.000 25.39 25.39 46.29 3.27
326 327 1.524848 TCTGGTCGACTCAGAGTGAC 58.475 55.000 24.14 14.77 36.46 3.67
327 328 1.072489 TCTGGTCGACTCAGAGTGACT 59.928 52.381 24.14 0.00 36.46 3.41
328 329 1.466950 CTGGTCGACTCAGAGTGACTC 59.533 57.143 22.23 3.98 34.36 3.36
329 330 1.072489 TGGTCGACTCAGAGTGACTCT 59.928 52.381 22.16 9.77 42.11 3.24
330 331 2.156098 GGTCGACTCAGAGTGACTCTT 58.844 52.381 13.34 0.00 38.99 2.85
331 332 2.554893 GGTCGACTCAGAGTGACTCTTT 59.445 50.000 13.34 0.00 38.99 2.52
332 333 3.004944 GGTCGACTCAGAGTGACTCTTTT 59.995 47.826 13.34 0.00 38.99 2.27
333 334 3.978217 GTCGACTCAGAGTGACTCTTTTG 59.022 47.826 13.34 8.38 38.99 2.44
334 335 2.728839 CGACTCAGAGTGACTCTTTTGC 59.271 50.000 13.34 2.52 38.99 3.68
335 336 3.551863 CGACTCAGAGTGACTCTTTTGCT 60.552 47.826 13.34 0.00 38.99 3.91
336 337 3.726607 ACTCAGAGTGACTCTTTTGCTG 58.273 45.455 13.34 1.43 38.99 4.41
337 338 3.386078 ACTCAGAGTGACTCTTTTGCTGA 59.614 43.478 13.34 6.10 38.99 4.26
338 339 3.987547 TCAGAGTGACTCTTTTGCTGAG 58.012 45.455 13.34 0.00 38.99 3.35
339 340 3.065655 CAGAGTGACTCTTTTGCTGAGG 58.934 50.000 13.34 0.00 38.99 3.86
340 341 1.803555 GAGTGACTCTTTTGCTGAGGC 59.196 52.381 5.12 0.00 39.89 4.70
341 342 1.419387 AGTGACTCTTTTGCTGAGGCT 59.581 47.619 0.00 0.00 40.12 4.58
342 343 2.158696 AGTGACTCTTTTGCTGAGGCTT 60.159 45.455 0.00 0.00 40.12 4.35
343 344 2.031333 GTGACTCTTTTGCTGAGGCTTG 60.031 50.000 0.00 0.00 40.12 4.01
344 345 1.538950 GACTCTTTTGCTGAGGCTTGG 59.461 52.381 0.00 0.00 36.68 3.61
345 346 0.886563 CTCTTTTGCTGAGGCTTGGG 59.113 55.000 0.00 0.00 39.59 4.12
346 347 0.478072 TCTTTTGCTGAGGCTTGGGA 59.522 50.000 0.00 0.00 39.59 4.37
347 348 1.076024 TCTTTTGCTGAGGCTTGGGAT 59.924 47.619 0.00 0.00 39.59 3.85
348 349 1.897802 CTTTTGCTGAGGCTTGGGATT 59.102 47.619 0.00 0.00 39.59 3.01
349 350 2.014010 TTTGCTGAGGCTTGGGATTT 57.986 45.000 0.00 0.00 39.59 2.17
350 351 1.259609 TTGCTGAGGCTTGGGATTTG 58.740 50.000 0.00 0.00 39.59 2.32
351 352 0.612732 TGCTGAGGCTTGGGATTTGG 60.613 55.000 0.00 0.00 39.59 3.28
352 353 0.613012 GCTGAGGCTTGGGATTTGGT 60.613 55.000 0.00 0.00 35.22 3.67
353 354 1.928868 CTGAGGCTTGGGATTTGGTT 58.071 50.000 0.00 0.00 0.00 3.67
354 355 2.883888 GCTGAGGCTTGGGATTTGGTTA 60.884 50.000 0.00 0.00 35.22 2.85
355 356 3.019564 CTGAGGCTTGGGATTTGGTTAG 58.980 50.000 0.00 0.00 0.00 2.34
356 357 2.291540 TGAGGCTTGGGATTTGGTTAGG 60.292 50.000 0.00 0.00 0.00 2.69
357 358 0.824109 GGCTTGGGATTTGGTTAGGC 59.176 55.000 0.00 0.00 0.00 3.93
358 359 0.824109 GCTTGGGATTTGGTTAGGCC 59.176 55.000 0.00 0.00 37.90 5.19
359 360 1.619704 GCTTGGGATTTGGTTAGGCCT 60.620 52.381 11.78 11.78 38.35 5.19
360 361 2.820178 CTTGGGATTTGGTTAGGCCTT 58.180 47.619 12.58 0.00 38.35 4.35
361 362 3.173151 CTTGGGATTTGGTTAGGCCTTT 58.827 45.455 12.58 0.00 38.35 3.11
362 363 3.268034 TGGGATTTGGTTAGGCCTTTT 57.732 42.857 12.58 0.00 38.35 2.27
363 364 2.903135 TGGGATTTGGTTAGGCCTTTTG 59.097 45.455 12.58 0.00 38.35 2.44
364 365 2.236146 GGGATTTGGTTAGGCCTTTTGG 59.764 50.000 12.58 0.00 44.18 3.28
379 380 5.644977 CCTTTTGGCTTTTAGACTTAGGG 57.355 43.478 0.00 0.00 0.00 3.53
380 381 4.082190 CCTTTTGGCTTTTAGACTTAGGGC 60.082 45.833 0.00 0.00 0.00 5.19
381 382 3.799432 TTGGCTTTTAGACTTAGGGCA 57.201 42.857 0.00 0.00 0.00 5.36
382 383 3.067684 TGGCTTTTAGACTTAGGGCAC 57.932 47.619 0.00 0.00 0.00 5.01
383 384 2.373836 TGGCTTTTAGACTTAGGGCACA 59.626 45.455 0.00 0.00 0.00 4.57
384 385 3.010420 GGCTTTTAGACTTAGGGCACAG 58.990 50.000 0.00 0.00 0.00 3.66
385 386 3.010420 GCTTTTAGACTTAGGGCACAGG 58.990 50.000 0.00 0.00 0.00 4.00
386 387 3.307480 GCTTTTAGACTTAGGGCACAGGA 60.307 47.826 0.00 0.00 0.00 3.86
387 388 4.806286 GCTTTTAGACTTAGGGCACAGGAA 60.806 45.833 0.00 0.00 0.00 3.36
388 389 4.986054 TTTAGACTTAGGGCACAGGAAA 57.014 40.909 0.00 0.00 0.00 3.13
389 390 5.514500 TTTAGACTTAGGGCACAGGAAAT 57.486 39.130 0.00 0.00 0.00 2.17
390 391 3.356529 AGACTTAGGGCACAGGAAATG 57.643 47.619 0.00 0.00 0.00 2.32
391 392 2.912956 AGACTTAGGGCACAGGAAATGA 59.087 45.455 0.00 0.00 0.00 2.57
392 393 3.054802 AGACTTAGGGCACAGGAAATGAG 60.055 47.826 0.00 0.00 0.00 2.90
393 394 2.644798 ACTTAGGGCACAGGAAATGAGT 59.355 45.455 0.00 0.00 0.00 3.41
394 395 3.844211 ACTTAGGGCACAGGAAATGAGTA 59.156 43.478 0.00 0.00 0.00 2.59
395 396 4.475016 ACTTAGGGCACAGGAAATGAGTAT 59.525 41.667 0.00 0.00 0.00 2.12
396 397 5.665812 ACTTAGGGCACAGGAAATGAGTATA 59.334 40.000 0.00 0.00 0.00 1.47
397 398 6.157994 ACTTAGGGCACAGGAAATGAGTATAA 59.842 38.462 0.00 0.00 0.00 0.98
398 399 4.781934 AGGGCACAGGAAATGAGTATAAC 58.218 43.478 0.00 0.00 0.00 1.89
399 400 3.560068 GGGCACAGGAAATGAGTATAACG 59.440 47.826 0.00 0.00 0.00 3.18
400 401 4.439057 GGCACAGGAAATGAGTATAACGA 58.561 43.478 0.00 0.00 0.00 3.85
401 402 5.057149 GGCACAGGAAATGAGTATAACGAT 58.943 41.667 0.00 0.00 0.00 3.73
402 403 5.177696 GGCACAGGAAATGAGTATAACGATC 59.822 44.000 0.00 0.00 0.00 3.69
403 404 5.753438 GCACAGGAAATGAGTATAACGATCA 59.247 40.000 0.00 0.00 0.00 2.92
404 405 6.257849 GCACAGGAAATGAGTATAACGATCAA 59.742 38.462 0.00 0.00 0.00 2.57
405 406 7.041780 GCACAGGAAATGAGTATAACGATCAAT 60.042 37.037 0.00 0.00 0.00 2.57
406 407 8.278408 CACAGGAAATGAGTATAACGATCAATG 58.722 37.037 0.00 0.00 0.00 2.82
407 408 8.204160 ACAGGAAATGAGTATAACGATCAATGA 58.796 33.333 0.00 0.00 0.00 2.57
408 409 8.491152 CAGGAAATGAGTATAACGATCAATGAC 58.509 37.037 0.00 0.00 0.00 3.06
409 410 8.204160 AGGAAATGAGTATAACGATCAATGACA 58.796 33.333 0.00 0.00 0.00 3.58
410 411 8.993121 GGAAATGAGTATAACGATCAATGACAT 58.007 33.333 0.00 0.00 0.00 3.06
411 412 9.803130 GAAATGAGTATAACGATCAATGACATG 57.197 33.333 0.00 0.00 0.00 3.21
412 413 9.546428 AAATGAGTATAACGATCAATGACATGA 57.454 29.630 0.00 0.00 0.00 3.07
413 414 8.754230 ATGAGTATAACGATCAATGACATGAG 57.246 34.615 0.00 0.00 31.76 2.90
414 415 7.940850 TGAGTATAACGATCAATGACATGAGA 58.059 34.615 0.00 0.00 31.76 3.27
415 416 8.579863 TGAGTATAACGATCAATGACATGAGAT 58.420 33.333 0.00 3.91 31.76 2.75
416 417 9.416794 GAGTATAACGATCAATGACATGAGATT 57.583 33.333 0.00 0.00 31.76 2.40
417 418 9.770097 AGTATAACGATCAATGACATGAGATTT 57.230 29.630 0.00 1.32 31.76 2.17
420 421 9.941664 ATAACGATCAATGACATGAGATTTTTC 57.058 29.630 0.00 0.00 31.76 2.29
421 422 7.621428 ACGATCAATGACATGAGATTTTTCT 57.379 32.000 0.00 0.00 31.76 2.52
422 423 8.048534 ACGATCAATGACATGAGATTTTTCTT 57.951 30.769 0.00 0.00 31.76 2.52
423 424 8.517878 ACGATCAATGACATGAGATTTTTCTTT 58.482 29.630 0.00 0.00 31.76 2.52
424 425 8.795341 CGATCAATGACATGAGATTTTTCTTTG 58.205 33.333 0.00 0.00 31.76 2.77
425 426 7.878477 TCAATGACATGAGATTTTTCTTTGC 57.122 32.000 0.00 0.00 0.00 3.68
426 427 6.869913 TCAATGACATGAGATTTTTCTTTGCC 59.130 34.615 0.00 0.00 0.00 4.52
427 428 6.600882 ATGACATGAGATTTTTCTTTGCCT 57.399 33.333 0.00 0.00 0.00 4.75
428 429 6.017400 TGACATGAGATTTTTCTTTGCCTC 57.983 37.500 0.00 0.00 0.00 4.70
429 430 5.047802 TGACATGAGATTTTTCTTTGCCTCC 60.048 40.000 0.00 0.00 0.00 4.30
430 431 4.221482 ACATGAGATTTTTCTTTGCCTCCC 59.779 41.667 0.00 0.00 0.00 4.30
431 432 3.843422 TGAGATTTTTCTTTGCCTCCCA 58.157 40.909 0.00 0.00 0.00 4.37
432 433 4.222336 TGAGATTTTTCTTTGCCTCCCAA 58.778 39.130 0.00 0.00 0.00 4.12
433 434 4.039124 TGAGATTTTTCTTTGCCTCCCAAC 59.961 41.667 0.00 0.00 31.97 3.77
434 435 2.880963 TTTTTCTTTGCCTCCCAACG 57.119 45.000 0.00 0.00 31.97 4.10
435 436 2.060050 TTTTCTTTGCCTCCCAACGA 57.940 45.000 0.00 0.00 31.97 3.85
436 437 2.286365 TTTCTTTGCCTCCCAACGAT 57.714 45.000 0.00 0.00 32.54 3.73
437 438 1.821216 TTCTTTGCCTCCCAACGATC 58.179 50.000 0.00 0.00 32.54 3.69
438 439 0.035439 TCTTTGCCTCCCAACGATCC 60.035 55.000 0.00 0.00 31.97 3.36
439 440 1.001393 TTTGCCTCCCAACGATCCC 60.001 57.895 0.00 0.00 31.97 3.85
440 441 1.497309 TTTGCCTCCCAACGATCCCT 61.497 55.000 0.00 0.00 31.97 4.20
441 442 1.910580 TTGCCTCCCAACGATCCCTC 61.911 60.000 0.00 0.00 0.00 4.30
442 443 3.108288 GCCTCCCAACGATCCCTCC 62.108 68.421 0.00 0.00 0.00 4.30
443 444 1.383248 CCTCCCAACGATCCCTCCT 60.383 63.158 0.00 0.00 0.00 3.69
444 445 0.105658 CCTCCCAACGATCCCTCCTA 60.106 60.000 0.00 0.00 0.00 2.94
445 446 1.691482 CCTCCCAACGATCCCTCCTAA 60.691 57.143 0.00 0.00 0.00 2.69
446 447 2.330216 CTCCCAACGATCCCTCCTAAT 58.670 52.381 0.00 0.00 0.00 1.73
447 448 3.507411 CTCCCAACGATCCCTCCTAATA 58.493 50.000 0.00 0.00 0.00 0.98
448 449 3.507411 TCCCAACGATCCCTCCTAATAG 58.493 50.000 0.00 0.00 0.00 1.73
449 450 3.116862 TCCCAACGATCCCTCCTAATAGT 60.117 47.826 0.00 0.00 0.00 2.12
450 451 3.006967 CCCAACGATCCCTCCTAATAGTG 59.993 52.174 0.00 0.00 0.00 2.74
451 452 3.641906 CCAACGATCCCTCCTAATAGTGT 59.358 47.826 0.00 0.00 0.00 3.55
452 453 4.501571 CCAACGATCCCTCCTAATAGTGTG 60.502 50.000 0.00 0.00 0.00 3.82
453 454 4.180377 ACGATCCCTCCTAATAGTGTGA 57.820 45.455 0.00 0.00 0.00 3.58
454 455 4.145807 ACGATCCCTCCTAATAGTGTGAG 58.854 47.826 0.00 0.00 0.00 3.51
455 456 4.141228 ACGATCCCTCCTAATAGTGTGAGA 60.141 45.833 0.00 0.00 0.00 3.27
456 457 5.013547 CGATCCCTCCTAATAGTGTGAGAT 58.986 45.833 0.00 0.00 0.00 2.75
457 458 5.124776 CGATCCCTCCTAATAGTGTGAGATC 59.875 48.000 0.00 0.00 0.00 2.75
458 459 4.742012 TCCCTCCTAATAGTGTGAGATCC 58.258 47.826 0.00 0.00 0.00 3.36
459 460 3.835395 CCCTCCTAATAGTGTGAGATCCC 59.165 52.174 0.00 0.00 0.00 3.85
460 461 3.835395 CCTCCTAATAGTGTGAGATCCCC 59.165 52.174 0.00 0.00 0.00 4.81
461 462 4.483950 CTCCTAATAGTGTGAGATCCCCA 58.516 47.826 0.00 0.00 0.00 4.96
462 463 4.890988 TCCTAATAGTGTGAGATCCCCAA 58.109 43.478 0.00 0.00 0.00 4.12
463 464 5.476983 TCCTAATAGTGTGAGATCCCCAAT 58.523 41.667 0.00 0.00 0.00 3.16
464 465 6.630131 TCCTAATAGTGTGAGATCCCCAATA 58.370 40.000 0.00 0.00 0.00 1.90
465 466 6.497259 TCCTAATAGTGTGAGATCCCCAATAC 59.503 42.308 0.00 0.00 0.00 1.89
466 467 6.498651 CCTAATAGTGTGAGATCCCCAATACT 59.501 42.308 0.00 0.00 0.00 2.12
467 468 6.426646 AATAGTGTGAGATCCCCAATACTC 57.573 41.667 0.00 0.00 0.00 2.59
468 469 3.724478 AGTGTGAGATCCCCAATACTCA 58.276 45.455 0.00 0.00 37.11 3.41
469 470 4.104086 AGTGTGAGATCCCCAATACTCAA 58.896 43.478 0.00 0.00 40.30 3.02
470 471 4.163078 AGTGTGAGATCCCCAATACTCAAG 59.837 45.833 0.00 0.00 40.30 3.02
471 472 4.162320 GTGTGAGATCCCCAATACTCAAGA 59.838 45.833 0.00 0.00 40.30 3.02
472 473 4.782691 TGTGAGATCCCCAATACTCAAGAA 59.217 41.667 0.00 0.00 40.30 2.52
473 474 5.119694 GTGAGATCCCCAATACTCAAGAAC 58.880 45.833 0.00 0.00 40.30 3.01
474 475 4.782691 TGAGATCCCCAATACTCAAGAACA 59.217 41.667 0.00 0.00 36.63 3.18
475 476 5.250543 TGAGATCCCCAATACTCAAGAACAA 59.749 40.000 0.00 0.00 36.63 2.83
476 477 6.139679 AGATCCCCAATACTCAAGAACAAA 57.860 37.500 0.00 0.00 0.00 2.83
477 478 6.552008 AGATCCCCAATACTCAAGAACAAAA 58.448 36.000 0.00 0.00 0.00 2.44
478 479 7.010160 AGATCCCCAATACTCAAGAACAAAAA 58.990 34.615 0.00 0.00 0.00 1.94
499 500 5.904362 AAAAGAAAGGCTATGCAGGTTAG 57.096 39.130 0.00 0.00 0.00 2.34
500 501 2.924421 AGAAAGGCTATGCAGGTTAGC 58.076 47.619 8.96 8.96 41.08 3.09
505 506 2.332063 GCTATGCAGGTTAGCCTTCA 57.668 50.000 0.00 0.00 44.18 3.02
506 507 1.943340 GCTATGCAGGTTAGCCTTCAC 59.057 52.381 0.00 0.00 44.18 3.18
507 508 2.205074 CTATGCAGGTTAGCCTTCACG 58.795 52.381 0.00 0.00 44.18 4.35
508 509 0.613260 ATGCAGGTTAGCCTTCACGA 59.387 50.000 0.00 0.00 44.18 4.35
509 510 0.613260 TGCAGGTTAGCCTTCACGAT 59.387 50.000 0.00 0.00 44.18 3.73
510 511 1.828595 TGCAGGTTAGCCTTCACGATA 59.171 47.619 0.00 0.00 44.18 2.92
511 512 2.434336 TGCAGGTTAGCCTTCACGATAT 59.566 45.455 0.00 0.00 44.18 1.63
512 513 3.060602 GCAGGTTAGCCTTCACGATATC 58.939 50.000 0.00 0.00 44.18 1.63
513 514 3.654414 CAGGTTAGCCTTCACGATATCC 58.346 50.000 0.00 0.00 44.18 2.59
514 515 3.322254 CAGGTTAGCCTTCACGATATCCT 59.678 47.826 0.00 0.00 44.18 3.24
515 516 3.967987 AGGTTAGCCTTCACGATATCCTT 59.032 43.478 0.00 0.00 44.18 3.36
516 517 4.039366 AGGTTAGCCTTCACGATATCCTTC 59.961 45.833 0.00 0.00 44.18 3.46
517 518 4.039366 GGTTAGCCTTCACGATATCCTTCT 59.961 45.833 0.00 0.00 0.00 2.85
518 519 5.453480 GGTTAGCCTTCACGATATCCTTCTT 60.453 44.000 0.00 0.00 0.00 2.52
519 520 4.065321 AGCCTTCACGATATCCTTCTTG 57.935 45.455 0.00 0.00 0.00 3.02
520 521 3.706594 AGCCTTCACGATATCCTTCTTGA 59.293 43.478 0.00 0.00 0.00 3.02
521 522 4.054671 GCCTTCACGATATCCTTCTTGAG 58.945 47.826 0.00 0.00 0.00 3.02
522 523 4.054671 CCTTCACGATATCCTTCTTGAGC 58.945 47.826 0.00 0.00 0.00 4.26
523 524 4.442052 CCTTCACGATATCCTTCTTGAGCA 60.442 45.833 0.00 0.00 0.00 4.26
524 525 4.046938 TCACGATATCCTTCTTGAGCAC 57.953 45.455 0.00 0.00 0.00 4.40
525 526 3.701542 TCACGATATCCTTCTTGAGCACT 59.298 43.478 0.00 0.00 0.00 4.40
526 527 4.160439 TCACGATATCCTTCTTGAGCACTT 59.840 41.667 0.00 0.00 0.00 3.16
527 528 4.269603 CACGATATCCTTCTTGAGCACTTG 59.730 45.833 0.00 0.00 0.00 3.16
528 529 4.160439 ACGATATCCTTCTTGAGCACTTGA 59.840 41.667 0.00 0.00 0.00 3.02
529 530 5.111989 CGATATCCTTCTTGAGCACTTGAA 58.888 41.667 0.00 0.00 0.00 2.69
530 531 5.757320 CGATATCCTTCTTGAGCACTTGAAT 59.243 40.000 0.00 0.00 0.00 2.57
531 532 6.259608 CGATATCCTTCTTGAGCACTTGAATT 59.740 38.462 0.00 0.00 0.00 2.17
532 533 7.201679 CGATATCCTTCTTGAGCACTTGAATTT 60.202 37.037 0.00 0.00 0.00 1.82
533 534 6.661304 ATCCTTCTTGAGCACTTGAATTTT 57.339 33.333 0.00 0.00 0.00 1.82
534 535 6.469782 TCCTTCTTGAGCACTTGAATTTTT 57.530 33.333 0.00 0.00 0.00 1.94
535 536 6.275335 TCCTTCTTGAGCACTTGAATTTTTG 58.725 36.000 0.00 0.00 0.00 2.44
536 537 6.044682 CCTTCTTGAGCACTTGAATTTTTGT 58.955 36.000 0.00 0.00 0.00 2.83
537 538 6.536224 CCTTCTTGAGCACTTGAATTTTTGTT 59.464 34.615 0.00 0.00 0.00 2.83
538 539 7.064966 CCTTCTTGAGCACTTGAATTTTTGTTT 59.935 33.333 0.00 0.00 0.00 2.83
539 540 7.903995 TCTTGAGCACTTGAATTTTTGTTTT 57.096 28.000 0.00 0.00 0.00 2.43
540 541 7.741198 TCTTGAGCACTTGAATTTTTGTTTTG 58.259 30.769 0.00 0.00 0.00 2.44
541 542 7.387397 TCTTGAGCACTTGAATTTTTGTTTTGT 59.613 29.630 0.00 0.00 0.00 2.83
542 543 6.829703 TGAGCACTTGAATTTTTGTTTTGTG 58.170 32.000 0.00 0.00 0.00 3.33
543 544 6.648310 TGAGCACTTGAATTTTTGTTTTGTGA 59.352 30.769 0.00 0.00 0.00 3.58
544 545 7.064060 AGCACTTGAATTTTTGTTTTGTGAG 57.936 32.000 0.00 0.00 0.00 3.51
545 546 6.873076 AGCACTTGAATTTTTGTTTTGTGAGA 59.127 30.769 0.00 0.00 0.00 3.27
546 547 6.955407 GCACTTGAATTTTTGTTTTGTGAGAC 59.045 34.615 0.00 0.00 0.00 3.36
547 548 7.359933 GCACTTGAATTTTTGTTTTGTGAGACA 60.360 33.333 0.00 0.00 0.00 3.41
548 549 8.658609 CACTTGAATTTTTGTTTTGTGAGACAT 58.341 29.630 0.00 0.00 0.00 3.06
549 550 9.218440 ACTTGAATTTTTGTTTTGTGAGACATT 57.782 25.926 0.00 0.00 0.00 2.71
550 551 9.480538 CTTGAATTTTTGTTTTGTGAGACATTG 57.519 29.630 0.00 0.00 0.00 2.82
551 552 8.768957 TGAATTTTTGTTTTGTGAGACATTGA 57.231 26.923 0.00 0.00 0.00 2.57
552 553 9.381033 TGAATTTTTGTTTTGTGAGACATTGAT 57.619 25.926 0.00 0.00 0.00 2.57
554 555 9.991388 AATTTTTGTTTTGTGAGACATTGATTG 57.009 25.926 0.00 0.00 0.00 2.67
555 556 8.768957 TTTTTGTTTTGTGAGACATTGATTGA 57.231 26.923 0.00 0.00 0.00 2.57
556 557 7.990541 TTTGTTTTGTGAGACATTGATTGAG 57.009 32.000 0.00 0.00 0.00 3.02
557 558 6.940831 TGTTTTGTGAGACATTGATTGAGA 57.059 33.333 0.00 0.00 0.00 3.27
558 559 7.332213 TGTTTTGTGAGACATTGATTGAGAA 57.668 32.000 0.00 0.00 0.00 2.87
559 560 7.944061 TGTTTTGTGAGACATTGATTGAGAAT 58.056 30.769 0.00 0.00 0.00 2.40
560 561 9.065798 TGTTTTGTGAGACATTGATTGAGAATA 57.934 29.630 0.00 0.00 0.00 1.75
561 562 9.334693 GTTTTGTGAGACATTGATTGAGAATAC 57.665 33.333 0.00 0.00 0.00 1.89
562 563 8.620116 TTTGTGAGACATTGATTGAGAATACA 57.380 30.769 0.00 0.00 0.00 2.29
563 564 8.620116 TTGTGAGACATTGATTGAGAATACAA 57.380 30.769 0.00 0.00 0.00 2.41
564 565 8.797350 TGTGAGACATTGATTGAGAATACAAT 57.203 30.769 0.00 0.00 42.19 2.71
565 566 9.234827 TGTGAGACATTGATTGAGAATACAATT 57.765 29.630 0.00 0.00 40.03 2.32
657 658 1.982226 TGCTCAGTTTTGCCCCTAGTA 59.018 47.619 0.00 0.00 0.00 1.82
1125 1126 2.028020 GGTTTCTCAGACACCGAGGAAT 60.028 50.000 0.00 0.00 30.73 3.01
1282 1283 0.392193 CGATGCTCTGGCCAAGACTT 60.392 55.000 7.01 0.00 37.74 3.01
1305 1306 6.829229 TTGATGAATGAACTGCAAGAAGAT 57.171 33.333 0.00 0.00 37.43 2.40
1793 1796 4.208632 GCGTAGAGCCAAGTGCAT 57.791 55.556 0.00 0.00 44.83 3.96
1849 1852 0.603065 ATTCAGGGGTTTTCTTGCGC 59.397 50.000 0.00 0.00 0.00 6.09
1916 1920 7.984050 TCATAATGCTGAAACTTTTTGTGGAAA 59.016 29.630 0.00 0.00 0.00 3.13
1956 1960 5.163754 CGGAGCCAAACAATTAAGGTTAGAG 60.164 44.000 0.00 0.00 0.00 2.43
2184 2189 1.609794 GGGACTCGAACCCAGGACT 60.610 63.158 18.78 0.00 46.05 3.85
2187 2192 1.816863 GACTCGAACCCAGGACTGCA 61.817 60.000 0.00 0.00 0.00 4.41
2210 2215 2.489437 GGGTTTGTGGTGTTTAGGGCTA 60.489 50.000 0.00 0.00 0.00 3.93
2215 2220 1.205417 GTGGTGTTTAGGGCTACGCTA 59.795 52.381 0.00 0.00 0.00 4.26
2256 2261 3.559171 GGCAAGACTTTGACATGGGTAGA 60.559 47.826 0.00 0.00 42.21 2.59
2286 2291 7.231722 GGAAGGTATACATAGTGAGACTGTGAT 59.768 40.741 5.01 0.88 39.34 3.06
2342 2350 4.338327 ACGCGTGAGAGTGGTTTC 57.662 55.556 12.93 0.00 44.38 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.208121 CCTAGGTCTCTCATTCTTCCTCTT 58.792 45.833 0.00 0.00 0.00 2.85
4 5 2.969262 CCCCTAGGTCTCTCATTCTTCC 59.031 54.545 8.29 0.00 0.00 3.46
5 6 2.969262 CCCCCTAGGTCTCTCATTCTTC 59.031 54.545 8.29 0.00 0.00 2.87
7 8 2.785357 CCCCCTAGGTCTCTCATTCT 57.215 55.000 8.29 0.00 0.00 2.40
23 24 3.480133 AGCATGGCGTACTCCCCC 61.480 66.667 0.00 0.00 0.00 5.40
24 25 2.203070 CAGCATGGCGTACTCCCC 60.203 66.667 0.00 0.00 0.00 4.81
25 26 2.897350 GCAGCATGGCGTACTCCC 60.897 66.667 0.00 0.00 35.86 4.30
34 35 2.684001 AAATGACAATGGCAGCATGG 57.316 45.000 0.00 0.00 35.86 3.66
35 36 4.092821 CAGAAAAATGACAATGGCAGCATG 59.907 41.667 0.00 0.00 40.87 4.06
36 37 4.250464 CAGAAAAATGACAATGGCAGCAT 58.750 39.130 0.00 0.00 0.00 3.79
37 38 3.069872 ACAGAAAAATGACAATGGCAGCA 59.930 39.130 0.00 0.00 0.00 4.41
38 39 3.656559 ACAGAAAAATGACAATGGCAGC 58.343 40.909 0.00 0.00 0.00 5.25
39 40 4.084223 GCAACAGAAAAATGACAATGGCAG 60.084 41.667 0.00 0.00 0.00 4.85
40 41 3.808726 GCAACAGAAAAATGACAATGGCA 59.191 39.130 0.00 0.00 0.00 4.92
41 42 4.060205 AGCAACAGAAAAATGACAATGGC 58.940 39.130 0.00 0.00 0.00 4.40
42 43 5.535333 AGAGCAACAGAAAAATGACAATGG 58.465 37.500 0.00 0.00 0.00 3.16
43 44 6.563381 GCAAGAGCAACAGAAAAATGACAATG 60.563 38.462 0.00 0.00 41.58 2.82
44 45 5.464389 GCAAGAGCAACAGAAAAATGACAAT 59.536 36.000 0.00 0.00 41.58 2.71
45 46 4.805192 GCAAGAGCAACAGAAAAATGACAA 59.195 37.500 0.00 0.00 41.58 3.18
46 47 4.362279 GCAAGAGCAACAGAAAAATGACA 58.638 39.130 0.00 0.00 41.58 3.58
47 48 3.423206 CGCAAGAGCAACAGAAAAATGAC 59.577 43.478 0.00 0.00 42.27 3.06
48 49 3.066621 ACGCAAGAGCAACAGAAAAATGA 59.933 39.130 0.00 0.00 42.27 2.57
49 50 3.180980 CACGCAAGAGCAACAGAAAAATG 59.819 43.478 0.00 0.00 42.27 2.32
50 51 3.066621 TCACGCAAGAGCAACAGAAAAAT 59.933 39.130 0.00 0.00 42.27 1.82
51 52 2.421775 TCACGCAAGAGCAACAGAAAAA 59.578 40.909 0.00 0.00 42.27 1.94
52 53 2.013400 TCACGCAAGAGCAACAGAAAA 58.987 42.857 0.00 0.00 42.27 2.29
53 54 1.599071 CTCACGCAAGAGCAACAGAAA 59.401 47.619 0.00 0.00 42.27 2.52
54 55 1.202521 TCTCACGCAAGAGCAACAGAA 60.203 47.619 0.00 0.00 42.27 3.02
55 56 0.389025 TCTCACGCAAGAGCAACAGA 59.611 50.000 0.00 0.00 42.27 3.41
56 57 1.194098 CTTCTCACGCAAGAGCAACAG 59.806 52.381 0.00 0.00 42.27 3.16
57 58 1.202521 TCTTCTCACGCAAGAGCAACA 60.203 47.619 0.00 0.00 42.27 3.33
58 59 1.502231 TCTTCTCACGCAAGAGCAAC 58.498 50.000 0.00 0.00 42.27 4.17
59 60 2.138320 CTTCTTCTCACGCAAGAGCAA 58.862 47.619 0.00 0.00 42.27 3.91
60 61 1.341209 TCTTCTTCTCACGCAAGAGCA 59.659 47.619 0.00 0.00 42.27 4.26
61 62 2.071688 TCTTCTTCTCACGCAAGAGC 57.928 50.000 0.00 0.00 43.62 4.09
62 63 3.906998 TCTTCTTCTTCTCACGCAAGAG 58.093 45.455 0.00 0.00 43.62 2.85
63 64 4.021981 TGATCTTCTTCTTCTCACGCAAGA 60.022 41.667 0.00 0.00 43.62 3.02
65 66 4.257267 TGATCTTCTTCTTCTCACGCAA 57.743 40.909 0.00 0.00 0.00 4.85
66 67 3.942130 TGATCTTCTTCTTCTCACGCA 57.058 42.857 0.00 0.00 0.00 5.24
67 68 4.688413 ACTTTGATCTTCTTCTTCTCACGC 59.312 41.667 0.00 0.00 0.00 5.34
68 69 7.875316 TTACTTTGATCTTCTTCTTCTCACG 57.125 36.000 0.00 0.00 0.00 4.35
69 70 9.871299 GTTTTACTTTGATCTTCTTCTTCTCAC 57.129 33.333 0.00 0.00 0.00 3.51
70 71 9.613428 TGTTTTACTTTGATCTTCTTCTTCTCA 57.387 29.630 0.00 0.00 0.00 3.27
71 72 9.871299 GTGTTTTACTTTGATCTTCTTCTTCTC 57.129 33.333 0.00 0.00 0.00 2.87
72 73 9.396022 TGTGTTTTACTTTGATCTTCTTCTTCT 57.604 29.630 0.00 0.00 0.00 2.85
75 76 9.178758 ACTTGTGTTTTACTTTGATCTTCTTCT 57.821 29.630 0.00 0.00 0.00 2.85
80 81 9.498307 CGTTTACTTGTGTTTTACTTTGATCTT 57.502 29.630 0.00 0.00 0.00 2.40
81 82 8.885722 TCGTTTACTTGTGTTTTACTTTGATCT 58.114 29.630 0.00 0.00 0.00 2.75
82 83 9.155053 CTCGTTTACTTGTGTTTTACTTTGATC 57.845 33.333 0.00 0.00 0.00 2.92
83 84 7.642586 GCTCGTTTACTTGTGTTTTACTTTGAT 59.357 33.333 0.00 0.00 0.00 2.57
84 85 6.962678 GCTCGTTTACTTGTGTTTTACTTTGA 59.037 34.615 0.00 0.00 0.00 2.69
85 86 6.964934 AGCTCGTTTACTTGTGTTTTACTTTG 59.035 34.615 0.00 0.00 0.00 2.77
86 87 7.080353 AGCTCGTTTACTTGTGTTTTACTTT 57.920 32.000 0.00 0.00 0.00 2.66
87 88 6.673154 AGCTCGTTTACTTGTGTTTTACTT 57.327 33.333 0.00 0.00 0.00 2.24
88 89 6.423001 CCTAGCTCGTTTACTTGTGTTTTACT 59.577 38.462 0.00 0.00 0.00 2.24
89 90 6.347160 CCCTAGCTCGTTTACTTGTGTTTTAC 60.347 42.308 0.00 0.00 0.00 2.01
90 91 5.697633 CCCTAGCTCGTTTACTTGTGTTTTA 59.302 40.000 0.00 0.00 0.00 1.52
91 92 4.514066 CCCTAGCTCGTTTACTTGTGTTTT 59.486 41.667 0.00 0.00 0.00 2.43
92 93 4.062991 CCCTAGCTCGTTTACTTGTGTTT 58.937 43.478 0.00 0.00 0.00 2.83
93 94 3.070590 ACCCTAGCTCGTTTACTTGTGTT 59.929 43.478 0.00 0.00 0.00 3.32
94 95 2.631545 ACCCTAGCTCGTTTACTTGTGT 59.368 45.455 0.00 0.00 0.00 3.72
95 96 3.314541 ACCCTAGCTCGTTTACTTGTG 57.685 47.619 0.00 0.00 0.00 3.33
96 97 5.672421 ATAACCCTAGCTCGTTTACTTGT 57.328 39.130 0.00 0.00 0.00 3.16
97 98 7.222224 CAGTTATAACCCTAGCTCGTTTACTTG 59.778 40.741 12.05 0.00 0.00 3.16
98 99 7.123247 TCAGTTATAACCCTAGCTCGTTTACTT 59.877 37.037 12.05 0.00 0.00 2.24
99 100 6.604795 TCAGTTATAACCCTAGCTCGTTTACT 59.395 38.462 12.05 0.00 0.00 2.24
100 101 6.799512 TCAGTTATAACCCTAGCTCGTTTAC 58.200 40.000 12.05 0.00 0.00 2.01
101 102 6.830324 TCTCAGTTATAACCCTAGCTCGTTTA 59.170 38.462 12.05 0.00 0.00 2.01
102 103 5.655532 TCTCAGTTATAACCCTAGCTCGTTT 59.344 40.000 12.05 0.00 0.00 3.60
103 104 5.067544 GTCTCAGTTATAACCCTAGCTCGTT 59.932 44.000 12.05 0.00 0.00 3.85
104 105 4.579753 GTCTCAGTTATAACCCTAGCTCGT 59.420 45.833 12.05 0.00 0.00 4.18
105 106 4.822896 AGTCTCAGTTATAACCCTAGCTCG 59.177 45.833 12.05 0.00 0.00 5.03
106 107 5.242171 GGAGTCTCAGTTATAACCCTAGCTC 59.758 48.000 12.05 13.20 0.00 4.09
107 108 5.141910 GGAGTCTCAGTTATAACCCTAGCT 58.858 45.833 12.05 5.77 0.00 3.32
108 109 4.023021 CGGAGTCTCAGTTATAACCCTAGC 60.023 50.000 12.05 1.15 0.00 3.42
109 110 5.239087 GTCGGAGTCTCAGTTATAACCCTAG 59.761 48.000 12.05 7.42 0.00 3.02
110 111 5.104193 AGTCGGAGTCTCAGTTATAACCCTA 60.104 44.000 12.05 0.00 0.00 3.53
111 112 3.952967 GTCGGAGTCTCAGTTATAACCCT 59.047 47.826 12.05 1.19 0.00 4.34
112 113 3.952967 AGTCGGAGTCTCAGTTATAACCC 59.047 47.826 12.05 3.68 0.00 4.11
113 114 4.260702 CGAGTCGGAGTCTCAGTTATAACC 60.261 50.000 12.05 0.00 42.60 2.85
114 115 4.332268 ACGAGTCGGAGTCTCAGTTATAAC 59.668 45.833 18.30 7.57 42.60 1.89
115 116 4.511527 ACGAGTCGGAGTCTCAGTTATAA 58.488 43.478 18.30 0.00 42.60 0.98
116 117 4.134379 ACGAGTCGGAGTCTCAGTTATA 57.866 45.455 18.30 0.00 42.60 0.98
117 118 2.988570 ACGAGTCGGAGTCTCAGTTAT 58.011 47.619 18.30 0.00 42.60 1.89
118 119 2.469274 ACGAGTCGGAGTCTCAGTTA 57.531 50.000 18.30 0.00 42.60 2.24
119 120 1.606903 AACGAGTCGGAGTCTCAGTT 58.393 50.000 18.30 5.27 42.60 3.16
120 121 2.075338 GTAACGAGTCGGAGTCTCAGT 58.925 52.381 18.30 0.00 42.60 3.41
121 122 1.397692 GGTAACGAGTCGGAGTCTCAG 59.602 57.143 18.30 0.00 42.60 3.35
122 123 1.002888 AGGTAACGAGTCGGAGTCTCA 59.997 52.381 18.30 0.00 42.60 3.27
123 124 1.736612 AGGTAACGAGTCGGAGTCTC 58.263 55.000 18.30 1.37 46.39 3.36
124 125 2.499289 TCTAGGTAACGAGTCGGAGTCT 59.501 50.000 18.30 11.09 46.39 3.24
125 126 2.898705 TCTAGGTAACGAGTCGGAGTC 58.101 52.381 18.30 2.63 46.39 3.36
126 127 3.557228 ATCTAGGTAACGAGTCGGAGT 57.443 47.619 18.30 4.16 46.39 3.85
127 128 4.630111 AGTATCTAGGTAACGAGTCGGAG 58.370 47.826 18.30 4.23 46.39 4.63
128 129 4.626042 GAGTATCTAGGTAACGAGTCGGA 58.374 47.826 18.30 2.52 46.39 4.55
129 130 4.988708 GAGTATCTAGGTAACGAGTCGG 57.011 50.000 18.30 0.00 46.39 4.79
142 143 5.043582 ACTTGGGTTCCACCTAGAGTATCTA 60.044 44.000 0.00 0.00 40.86 1.98
143 144 4.264895 ACTTGGGTTCCACCTAGAGTATCT 60.265 45.833 0.00 0.00 41.93 1.98
144 145 4.031611 ACTTGGGTTCCACCTAGAGTATC 58.968 47.826 0.00 0.00 38.64 2.24
145 146 3.775316 CACTTGGGTTCCACCTAGAGTAT 59.225 47.826 0.00 0.00 38.64 2.12
146 147 3.170717 CACTTGGGTTCCACCTAGAGTA 58.829 50.000 0.00 0.00 38.64 2.59
147 148 1.978580 CACTTGGGTTCCACCTAGAGT 59.021 52.381 0.00 0.00 38.64 3.24
148 149 1.339151 GCACTTGGGTTCCACCTAGAG 60.339 57.143 0.00 0.00 38.64 2.43
149 150 0.690762 GCACTTGGGTTCCACCTAGA 59.309 55.000 0.00 0.00 38.64 2.43
150 151 0.400213 TGCACTTGGGTTCCACCTAG 59.600 55.000 0.00 0.00 38.64 3.02
151 152 0.847373 TTGCACTTGGGTTCCACCTA 59.153 50.000 0.00 0.00 38.64 3.08
152 153 0.755327 GTTGCACTTGGGTTCCACCT 60.755 55.000 0.00 0.00 38.64 4.00
153 154 1.739667 GTTGCACTTGGGTTCCACC 59.260 57.895 0.00 0.00 37.60 4.61
154 155 1.040339 TGGTTGCACTTGGGTTCCAC 61.040 55.000 0.00 0.00 30.78 4.02
155 156 0.754957 CTGGTTGCACTTGGGTTCCA 60.755 55.000 0.00 0.00 0.00 3.53
156 157 0.467290 TCTGGTTGCACTTGGGTTCC 60.467 55.000 0.00 0.00 0.00 3.62
157 158 0.954452 CTCTGGTTGCACTTGGGTTC 59.046 55.000 0.00 0.00 0.00 3.62
158 159 0.258774 ACTCTGGTTGCACTTGGGTT 59.741 50.000 0.00 0.00 0.00 4.11
159 160 1.136828 TACTCTGGTTGCACTTGGGT 58.863 50.000 0.00 0.00 0.00 4.51
160 161 1.880027 GTTACTCTGGTTGCACTTGGG 59.120 52.381 0.00 0.00 0.00 4.12
161 162 2.549754 CTGTTACTCTGGTTGCACTTGG 59.450 50.000 0.00 0.00 0.00 3.61
162 163 3.466836 TCTGTTACTCTGGTTGCACTTG 58.533 45.455 0.00 0.00 0.00 3.16
163 164 3.838244 TCTGTTACTCTGGTTGCACTT 57.162 42.857 0.00 0.00 0.00 3.16
164 165 4.772624 TCTATCTGTTACTCTGGTTGCACT 59.227 41.667 0.00 0.00 0.00 4.40
165 166 5.073311 TCTATCTGTTACTCTGGTTGCAC 57.927 43.478 0.00 0.00 0.00 4.57
166 167 5.939764 ATCTATCTGTTACTCTGGTTGCA 57.060 39.130 0.00 0.00 0.00 4.08
167 168 7.045126 AGTATCTATCTGTTACTCTGGTTGC 57.955 40.000 0.00 0.00 0.00 4.17
186 187 0.671251 CGGGTCAGAGCCAGAGTATC 59.329 60.000 18.91 0.00 34.89 2.24
187 188 0.259065 TCGGGTCAGAGCCAGAGTAT 59.741 55.000 18.91 0.00 34.89 2.12
188 189 0.394488 CTCGGGTCAGAGCCAGAGTA 60.394 60.000 22.33 4.28 43.02 2.59
189 190 1.680651 CTCGGGTCAGAGCCAGAGT 60.681 63.158 22.33 0.00 43.02 3.24
190 191 3.205395 CTCGGGTCAGAGCCAGAG 58.795 66.667 18.91 19.19 42.58 3.35
191 192 1.379176 CTCTCGGGTCAGAGCCAGA 60.379 63.158 18.91 17.01 38.12 3.86
192 193 2.422231 CCTCTCGGGTCAGAGCCAG 61.422 68.421 18.91 14.01 38.98 4.85
193 194 2.363018 CCTCTCGGGTCAGAGCCA 60.363 66.667 18.91 5.19 38.98 4.75
194 195 3.151022 CCCTCTCGGGTCAGAGCC 61.151 72.222 8.79 8.79 46.12 4.70
203 204 5.506982 CGAGTTTTACTATAACCCCTCTCGG 60.507 48.000 0.00 0.00 37.82 4.63
204 205 5.297776 TCGAGTTTTACTATAACCCCTCTCG 59.702 44.000 0.00 0.00 41.13 4.04
205 206 6.705863 TCGAGTTTTACTATAACCCCTCTC 57.294 41.667 0.00 0.00 0.00 3.20
206 207 6.438425 TGTTCGAGTTTTACTATAACCCCTCT 59.562 38.462 0.00 0.00 0.00 3.69
207 208 6.533012 GTGTTCGAGTTTTACTATAACCCCTC 59.467 42.308 0.00 0.00 0.00 4.30
208 209 6.212187 AGTGTTCGAGTTTTACTATAACCCCT 59.788 38.462 0.00 0.00 0.00 4.79
209 210 6.401394 AGTGTTCGAGTTTTACTATAACCCC 58.599 40.000 0.00 0.00 0.00 4.95
210 211 7.275123 CAGAGTGTTCGAGTTTTACTATAACCC 59.725 40.741 0.00 0.00 0.00 4.11
211 212 8.025445 TCAGAGTGTTCGAGTTTTACTATAACC 58.975 37.037 0.00 0.00 0.00 2.85
212 213 8.848528 GTCAGAGTGTTCGAGTTTTACTATAAC 58.151 37.037 0.00 0.00 0.00 1.89
213 214 8.790718 AGTCAGAGTGTTCGAGTTTTACTATAA 58.209 33.333 0.00 0.00 0.00 0.98
214 215 8.332996 AGTCAGAGTGTTCGAGTTTTACTATA 57.667 34.615 0.00 0.00 0.00 1.31
215 216 7.216973 AGTCAGAGTGTTCGAGTTTTACTAT 57.783 36.000 0.00 0.00 0.00 2.12
216 217 6.630444 AGTCAGAGTGTTCGAGTTTTACTA 57.370 37.500 0.00 0.00 0.00 1.82
217 218 5.517322 AGTCAGAGTGTTCGAGTTTTACT 57.483 39.130 0.00 0.00 0.00 2.24
218 219 6.204359 TGTAGTCAGAGTGTTCGAGTTTTAC 58.796 40.000 0.00 0.00 0.00 2.01
219 220 6.381481 TGTAGTCAGAGTGTTCGAGTTTTA 57.619 37.500 0.00 0.00 0.00 1.52
220 221 5.258456 TGTAGTCAGAGTGTTCGAGTTTT 57.742 39.130 0.00 0.00 0.00 2.43
221 222 4.913335 TGTAGTCAGAGTGTTCGAGTTT 57.087 40.909 0.00 0.00 0.00 2.66
222 223 4.913335 TTGTAGTCAGAGTGTTCGAGTT 57.087 40.909 0.00 0.00 0.00 3.01
223 224 4.913335 TTTGTAGTCAGAGTGTTCGAGT 57.087 40.909 0.00 0.00 0.00 4.18
224 225 5.977725 TCTTTTTGTAGTCAGAGTGTTCGAG 59.022 40.000 0.00 0.00 0.00 4.04
225 226 5.898174 TCTTTTTGTAGTCAGAGTGTTCGA 58.102 37.500 0.00 0.00 0.00 3.71
226 227 6.035650 TGTTCTTTTTGTAGTCAGAGTGTTCG 59.964 38.462 0.00 0.00 0.00 3.95
227 228 7.180748 GTGTTCTTTTTGTAGTCAGAGTGTTC 58.819 38.462 0.00 0.00 0.00 3.18
228 229 6.183360 CGTGTTCTTTTTGTAGTCAGAGTGTT 60.183 38.462 0.00 0.00 0.00 3.32
229 230 5.291128 CGTGTTCTTTTTGTAGTCAGAGTGT 59.709 40.000 0.00 0.00 0.00 3.55
230 231 5.728255 CGTGTTCTTTTTGTAGTCAGAGTG 58.272 41.667 0.00 0.00 0.00 3.51
231 232 4.270325 GCGTGTTCTTTTTGTAGTCAGAGT 59.730 41.667 0.00 0.00 0.00 3.24
232 233 4.508124 AGCGTGTTCTTTTTGTAGTCAGAG 59.492 41.667 0.00 0.00 0.00 3.35
233 234 4.439057 AGCGTGTTCTTTTTGTAGTCAGA 58.561 39.130 0.00 0.00 0.00 3.27
234 235 4.318831 GGAGCGTGTTCTTTTTGTAGTCAG 60.319 45.833 0.00 0.00 0.00 3.51
235 236 3.558418 GGAGCGTGTTCTTTTTGTAGTCA 59.442 43.478 0.00 0.00 0.00 3.41
236 237 3.558418 TGGAGCGTGTTCTTTTTGTAGTC 59.442 43.478 0.00 0.00 0.00 2.59
237 238 3.537580 TGGAGCGTGTTCTTTTTGTAGT 58.462 40.909 0.00 0.00 0.00 2.73
238 239 4.749245 ATGGAGCGTGTTCTTTTTGTAG 57.251 40.909 0.00 0.00 0.00 2.74
239 240 5.049267 GGTTATGGAGCGTGTTCTTTTTGTA 60.049 40.000 0.00 0.00 0.00 2.41
240 241 4.261447 GGTTATGGAGCGTGTTCTTTTTGT 60.261 41.667 0.00 0.00 0.00 2.83
241 242 4.226761 GGTTATGGAGCGTGTTCTTTTTG 58.773 43.478 0.00 0.00 0.00 2.44
242 243 3.886505 TGGTTATGGAGCGTGTTCTTTTT 59.113 39.130 0.00 0.00 0.00 1.94
243 244 3.252458 GTGGTTATGGAGCGTGTTCTTTT 59.748 43.478 0.00 0.00 0.00 2.27
244 245 2.812011 GTGGTTATGGAGCGTGTTCTTT 59.188 45.455 0.00 0.00 0.00 2.52
245 246 2.224426 TGTGGTTATGGAGCGTGTTCTT 60.224 45.455 0.00 0.00 0.00 2.52
246 247 1.346395 TGTGGTTATGGAGCGTGTTCT 59.654 47.619 0.00 0.00 0.00 3.01
247 248 1.732259 CTGTGGTTATGGAGCGTGTTC 59.268 52.381 0.00 0.00 0.00 3.18
248 249 1.808411 CTGTGGTTATGGAGCGTGTT 58.192 50.000 0.00 0.00 0.00 3.32
249 250 0.673644 GCTGTGGTTATGGAGCGTGT 60.674 55.000 0.00 0.00 0.00 4.49
250 251 0.391661 AGCTGTGGTTATGGAGCGTG 60.392 55.000 0.00 0.00 36.52 5.34
251 252 1.137086 CTAGCTGTGGTTATGGAGCGT 59.863 52.381 0.00 0.00 36.52 5.07
252 253 1.858091 CTAGCTGTGGTTATGGAGCG 58.142 55.000 0.00 0.00 36.52 5.03
253 254 1.139853 AGCTAGCTGTGGTTATGGAGC 59.860 52.381 18.57 0.00 0.00 4.70
254 255 3.553922 GCTAGCTAGCTGTGGTTATGGAG 60.554 52.174 33.71 13.00 45.62 3.86
255 256 2.365617 GCTAGCTAGCTGTGGTTATGGA 59.634 50.000 33.71 1.67 45.62 3.41
256 257 2.760374 GCTAGCTAGCTGTGGTTATGG 58.240 52.381 33.71 1.19 45.62 2.74
267 268 3.872842 AGGAGTCTCCGGCTAGCTAGC 62.873 61.905 33.40 33.40 42.75 3.42
268 269 0.109723 AGGAGTCTCCGGCTAGCTAG 59.890 60.000 16.84 16.84 42.75 3.42
269 270 0.179015 CAGGAGTCTCCGGCTAGCTA 60.179 60.000 15.72 0.00 42.75 3.32
270 271 1.454847 CAGGAGTCTCCGGCTAGCT 60.455 63.158 15.72 0.00 42.75 3.32
271 272 3.124686 CAGGAGTCTCCGGCTAGC 58.875 66.667 13.41 6.04 42.75 3.42
276 277 0.539051 ATTTCAGCAGGAGTCTCCGG 59.461 55.000 14.22 14.22 42.75 5.14
277 278 3.090952 CTATTTCAGCAGGAGTCTCCG 57.909 52.381 13.41 9.46 42.75 4.63
288 289 7.829450 GACCAGAGTCTTCAAGCTATTTCAGC 61.829 46.154 0.00 0.00 44.38 4.26
289 290 5.486526 ACCAGAGTCTTCAAGCTATTTCAG 58.513 41.667 0.00 0.00 0.00 3.02
290 291 5.482908 GACCAGAGTCTTCAAGCTATTTCA 58.517 41.667 0.00 0.00 40.10 2.69
291 292 4.564769 CGACCAGAGTCTTCAAGCTATTTC 59.435 45.833 0.00 0.00 41.16 2.17
292 293 4.220821 TCGACCAGAGTCTTCAAGCTATTT 59.779 41.667 0.00 0.00 41.16 1.40
293 294 3.764434 TCGACCAGAGTCTTCAAGCTATT 59.236 43.478 0.00 0.00 41.16 1.73
294 295 3.129638 GTCGACCAGAGTCTTCAAGCTAT 59.870 47.826 3.51 0.00 41.16 2.97
295 296 2.488545 GTCGACCAGAGTCTTCAAGCTA 59.511 50.000 3.51 0.00 41.16 3.32
296 297 1.271102 GTCGACCAGAGTCTTCAAGCT 59.729 52.381 3.51 0.00 41.16 3.74
297 298 1.271102 AGTCGACCAGAGTCTTCAAGC 59.729 52.381 13.01 0.00 41.16 4.01
298 299 2.554462 TGAGTCGACCAGAGTCTTCAAG 59.446 50.000 13.01 0.00 46.85 3.02
299 300 2.554462 CTGAGTCGACCAGAGTCTTCAA 59.446 50.000 22.23 0.67 46.85 2.69
300 301 2.155279 CTGAGTCGACCAGAGTCTTCA 58.845 52.381 22.23 12.33 46.85 3.02
301 302 2.428491 TCTGAGTCGACCAGAGTCTTC 58.572 52.381 24.14 10.42 46.85 2.87
302 303 2.570415 TCTGAGTCGACCAGAGTCTT 57.430 50.000 24.14 1.47 46.85 3.01
307 308 1.072489 AGTCACTCTGAGTCGACCAGA 59.928 52.381 25.39 25.39 38.24 3.86
308 309 1.466950 GAGTCACTCTGAGTCGACCAG 59.533 57.143 24.04 21.24 37.13 4.00
309 310 1.524848 GAGTCACTCTGAGTCGACCA 58.475 55.000 24.04 9.18 37.13 4.02
314 315 3.740321 CAGCAAAAGAGTCACTCTGAGTC 59.260 47.826 8.49 0.00 44.97 3.36
315 316 3.386078 TCAGCAAAAGAGTCACTCTGAGT 59.614 43.478 8.49 4.06 40.28 3.41
316 317 3.987547 TCAGCAAAAGAGTCACTCTGAG 58.012 45.455 8.49 2.45 40.28 3.35
317 318 3.244009 CCTCAGCAAAAGAGTCACTCTGA 60.244 47.826 8.49 0.00 40.28 3.27
318 319 3.065655 CCTCAGCAAAAGAGTCACTCTG 58.934 50.000 8.49 0.00 40.28 3.35
319 320 2.549778 GCCTCAGCAAAAGAGTCACTCT 60.550 50.000 0.00 0.00 39.93 3.24
320 321 1.803555 GCCTCAGCAAAAGAGTCACTC 59.196 52.381 0.00 0.00 39.53 3.51
321 322 1.419387 AGCCTCAGCAAAAGAGTCACT 59.581 47.619 0.00 0.00 43.56 3.41
322 323 1.889545 AGCCTCAGCAAAAGAGTCAC 58.110 50.000 0.00 0.00 43.56 3.67
323 324 2.224606 CAAGCCTCAGCAAAAGAGTCA 58.775 47.619 0.00 0.00 43.56 3.41
324 325 1.538950 CCAAGCCTCAGCAAAAGAGTC 59.461 52.381 0.00 0.00 43.56 3.36
325 326 1.613836 CCAAGCCTCAGCAAAAGAGT 58.386 50.000 0.00 0.00 43.56 3.24
326 327 0.886563 CCCAAGCCTCAGCAAAAGAG 59.113 55.000 0.00 0.00 43.56 2.85
327 328 0.478072 TCCCAAGCCTCAGCAAAAGA 59.522 50.000 0.00 0.00 43.56 2.52
328 329 1.553706 ATCCCAAGCCTCAGCAAAAG 58.446 50.000 0.00 0.00 43.56 2.27
329 330 2.014010 AATCCCAAGCCTCAGCAAAA 57.986 45.000 0.00 0.00 43.56 2.44
330 331 1.619827 CAAATCCCAAGCCTCAGCAAA 59.380 47.619 0.00 0.00 43.56 3.68
331 332 1.259609 CAAATCCCAAGCCTCAGCAA 58.740 50.000 0.00 0.00 43.56 3.91
332 333 0.612732 CCAAATCCCAAGCCTCAGCA 60.613 55.000 0.00 0.00 43.56 4.41
333 334 0.613012 ACCAAATCCCAAGCCTCAGC 60.613 55.000 0.00 0.00 40.32 4.26
334 335 1.928868 AACCAAATCCCAAGCCTCAG 58.071 50.000 0.00 0.00 0.00 3.35
335 336 2.291540 CCTAACCAAATCCCAAGCCTCA 60.292 50.000 0.00 0.00 0.00 3.86
336 337 2.379005 CCTAACCAAATCCCAAGCCTC 58.621 52.381 0.00 0.00 0.00 4.70
337 338 1.619704 GCCTAACCAAATCCCAAGCCT 60.620 52.381 0.00 0.00 0.00 4.58
338 339 0.824109 GCCTAACCAAATCCCAAGCC 59.176 55.000 0.00 0.00 0.00 4.35
339 340 0.824109 GGCCTAACCAAATCCCAAGC 59.176 55.000 0.00 0.00 38.86 4.01
340 341 2.532250 AGGCCTAACCAAATCCCAAG 57.468 50.000 1.29 0.00 43.14 3.61
341 342 3.268034 AAAGGCCTAACCAAATCCCAA 57.732 42.857 5.16 0.00 43.14 4.12
342 343 2.903135 CAAAAGGCCTAACCAAATCCCA 59.097 45.455 5.16 0.00 43.14 4.37
343 344 2.236146 CCAAAAGGCCTAACCAAATCCC 59.764 50.000 5.16 0.00 43.14 3.85
344 345 2.354704 GCCAAAAGGCCTAACCAAATCC 60.355 50.000 5.16 0.00 43.14 3.01
345 346 2.567169 AGCCAAAAGGCCTAACCAAATC 59.433 45.455 5.16 0.00 43.14 2.17
346 347 2.619931 AGCCAAAAGGCCTAACCAAAT 58.380 42.857 5.16 0.00 43.14 2.32
347 348 2.095604 AGCCAAAAGGCCTAACCAAA 57.904 45.000 5.16 0.00 43.14 3.28
348 349 2.095604 AAGCCAAAAGGCCTAACCAA 57.904 45.000 5.16 0.00 43.14 3.67
349 350 2.095604 AAAGCCAAAAGGCCTAACCA 57.904 45.000 5.16 0.00 43.14 3.67
350 351 3.830178 TCTAAAAGCCAAAAGGCCTAACC 59.170 43.478 5.16 0.00 39.61 2.85
351 352 4.523173 AGTCTAAAAGCCAAAAGGCCTAAC 59.477 41.667 5.16 0.00 35.12 2.34
352 353 4.736473 AGTCTAAAAGCCAAAAGGCCTAA 58.264 39.130 5.16 0.00 35.12 2.69
353 354 4.382386 AGTCTAAAAGCCAAAAGGCCTA 57.618 40.909 5.16 0.00 35.12 3.93
354 355 3.244887 AGTCTAAAAGCCAAAAGGCCT 57.755 42.857 0.00 0.00 35.12 5.19
355 356 4.082190 CCTAAGTCTAAAAGCCAAAAGGCC 60.082 45.833 2.33 0.00 35.12 5.19
356 357 4.082190 CCCTAAGTCTAAAAGCCAAAAGGC 60.082 45.833 0.00 0.00 0.00 4.35
357 358 4.082190 GCCCTAAGTCTAAAAGCCAAAAGG 60.082 45.833 0.00 0.00 0.00 3.11
358 359 4.522789 TGCCCTAAGTCTAAAAGCCAAAAG 59.477 41.667 0.00 0.00 0.00 2.27
359 360 4.279922 GTGCCCTAAGTCTAAAAGCCAAAA 59.720 41.667 0.00 0.00 0.00 2.44
360 361 3.824443 GTGCCCTAAGTCTAAAAGCCAAA 59.176 43.478 0.00 0.00 0.00 3.28
361 362 3.181438 TGTGCCCTAAGTCTAAAAGCCAA 60.181 43.478 0.00 0.00 0.00 4.52
362 363 2.373836 TGTGCCCTAAGTCTAAAAGCCA 59.626 45.455 0.00 0.00 0.00 4.75
363 364 3.010420 CTGTGCCCTAAGTCTAAAAGCC 58.990 50.000 0.00 0.00 0.00 4.35
364 365 3.010420 CCTGTGCCCTAAGTCTAAAAGC 58.990 50.000 0.00 0.00 0.00 3.51
365 366 4.553330 TCCTGTGCCCTAAGTCTAAAAG 57.447 45.455 0.00 0.00 0.00 2.27
366 367 4.986054 TTCCTGTGCCCTAAGTCTAAAA 57.014 40.909 0.00 0.00 0.00 1.52
367 368 4.986054 TTTCCTGTGCCCTAAGTCTAAA 57.014 40.909 0.00 0.00 0.00 1.85
368 369 4.534500 TCATTTCCTGTGCCCTAAGTCTAA 59.466 41.667 0.00 0.00 0.00 2.10
369 370 4.101114 TCATTTCCTGTGCCCTAAGTCTA 58.899 43.478 0.00 0.00 0.00 2.59
370 371 2.912956 TCATTTCCTGTGCCCTAAGTCT 59.087 45.455 0.00 0.00 0.00 3.24
371 372 3.274288 CTCATTTCCTGTGCCCTAAGTC 58.726 50.000 0.00 0.00 0.00 3.01
372 373 2.644798 ACTCATTTCCTGTGCCCTAAGT 59.355 45.455 0.00 0.00 0.00 2.24
373 374 3.356529 ACTCATTTCCTGTGCCCTAAG 57.643 47.619 0.00 0.00 0.00 2.18
374 375 6.354130 GTTATACTCATTTCCTGTGCCCTAA 58.646 40.000 0.00 0.00 0.00 2.69
375 376 5.452776 CGTTATACTCATTTCCTGTGCCCTA 60.453 44.000 0.00 0.00 0.00 3.53
376 377 4.683400 CGTTATACTCATTTCCTGTGCCCT 60.683 45.833 0.00 0.00 0.00 5.19
377 378 3.560068 CGTTATACTCATTTCCTGTGCCC 59.440 47.826 0.00 0.00 0.00 5.36
378 379 4.439057 TCGTTATACTCATTTCCTGTGCC 58.561 43.478 0.00 0.00 0.00 5.01
379 380 5.753438 TGATCGTTATACTCATTTCCTGTGC 59.247 40.000 0.00 0.00 0.00 4.57
380 381 7.770801 TTGATCGTTATACTCATTTCCTGTG 57.229 36.000 0.00 0.00 0.00 3.66
381 382 8.204160 TCATTGATCGTTATACTCATTTCCTGT 58.796 33.333 0.00 0.00 0.00 4.00
382 383 8.491152 GTCATTGATCGTTATACTCATTTCCTG 58.509 37.037 0.00 0.00 0.00 3.86
383 384 8.204160 TGTCATTGATCGTTATACTCATTTCCT 58.796 33.333 0.00 0.00 0.00 3.36
384 385 8.365399 TGTCATTGATCGTTATACTCATTTCC 57.635 34.615 0.00 0.00 0.00 3.13
385 386 9.803130 CATGTCATTGATCGTTATACTCATTTC 57.197 33.333 0.00 0.00 0.00 2.17
386 387 9.546428 TCATGTCATTGATCGTTATACTCATTT 57.454 29.630 0.00 0.00 0.00 2.32
387 388 9.201127 CTCATGTCATTGATCGTTATACTCATT 57.799 33.333 0.00 0.00 0.00 2.57
388 389 8.579863 TCTCATGTCATTGATCGTTATACTCAT 58.420 33.333 0.00 0.00 0.00 2.90
389 390 7.940850 TCTCATGTCATTGATCGTTATACTCA 58.059 34.615 0.00 0.00 0.00 3.41
390 391 8.978564 ATCTCATGTCATTGATCGTTATACTC 57.021 34.615 0.00 0.00 0.00 2.59
391 392 9.770097 AAATCTCATGTCATTGATCGTTATACT 57.230 29.630 0.00 0.00 0.00 2.12
394 395 9.941664 GAAAAATCTCATGTCATTGATCGTTAT 57.058 29.630 0.00 0.00 0.00 1.89
395 396 9.166173 AGAAAAATCTCATGTCATTGATCGTTA 57.834 29.630 0.00 0.00 0.00 3.18
396 397 8.048534 AGAAAAATCTCATGTCATTGATCGTT 57.951 30.769 0.00 0.00 0.00 3.85
397 398 7.621428 AGAAAAATCTCATGTCATTGATCGT 57.379 32.000 0.00 0.00 0.00 3.73
398 399 8.795341 CAAAGAAAAATCTCATGTCATTGATCG 58.205 33.333 0.00 0.00 0.00 3.69
399 400 8.592998 GCAAAGAAAAATCTCATGTCATTGATC 58.407 33.333 0.00 0.00 0.00 2.92
400 401 7.548075 GGCAAAGAAAAATCTCATGTCATTGAT 59.452 33.333 0.00 0.00 0.00 2.57
401 402 6.869913 GGCAAAGAAAAATCTCATGTCATTGA 59.130 34.615 0.00 0.00 0.00 2.57
402 403 6.872020 AGGCAAAGAAAAATCTCATGTCATTG 59.128 34.615 0.00 0.00 0.00 2.82
403 404 7.001099 AGGCAAAGAAAAATCTCATGTCATT 57.999 32.000 0.00 0.00 0.00 2.57
404 405 6.350780 GGAGGCAAAGAAAAATCTCATGTCAT 60.351 38.462 0.00 0.00 0.00 3.06
405 406 5.047802 GGAGGCAAAGAAAAATCTCATGTCA 60.048 40.000 0.00 0.00 0.00 3.58
406 407 5.405797 GGAGGCAAAGAAAAATCTCATGTC 58.594 41.667 0.00 0.00 0.00 3.06
407 408 4.221482 GGGAGGCAAAGAAAAATCTCATGT 59.779 41.667 0.00 0.00 0.00 3.21
408 409 4.221262 TGGGAGGCAAAGAAAAATCTCATG 59.779 41.667 0.00 0.00 0.00 3.07
409 410 4.419282 TGGGAGGCAAAGAAAAATCTCAT 58.581 39.130 0.00 0.00 0.00 2.90
410 411 3.843422 TGGGAGGCAAAGAAAAATCTCA 58.157 40.909 0.00 0.00 0.00 3.27
411 412 4.560128 GTTGGGAGGCAAAGAAAAATCTC 58.440 43.478 0.00 0.00 0.00 2.75
412 413 3.005791 CGTTGGGAGGCAAAGAAAAATCT 59.994 43.478 0.00 0.00 0.00 2.40
413 414 3.005367 TCGTTGGGAGGCAAAGAAAAATC 59.995 43.478 0.00 0.00 0.00 2.17
414 415 2.962421 TCGTTGGGAGGCAAAGAAAAAT 59.038 40.909 0.00 0.00 0.00 1.82
415 416 2.379972 TCGTTGGGAGGCAAAGAAAAA 58.620 42.857 0.00 0.00 0.00 1.94
416 417 2.060050 TCGTTGGGAGGCAAAGAAAA 57.940 45.000 0.00 0.00 0.00 2.29
417 418 2.159382 GATCGTTGGGAGGCAAAGAAA 58.841 47.619 0.00 0.00 0.00 2.52
418 419 1.613255 GGATCGTTGGGAGGCAAAGAA 60.613 52.381 0.00 0.00 0.00 2.52
419 420 0.035439 GGATCGTTGGGAGGCAAAGA 60.035 55.000 0.00 0.00 0.00 2.52
420 421 1.032114 GGGATCGTTGGGAGGCAAAG 61.032 60.000 0.00 0.00 0.00 2.77
421 422 1.001393 GGGATCGTTGGGAGGCAAA 60.001 57.895 0.00 0.00 0.00 3.68
422 423 1.910580 GAGGGATCGTTGGGAGGCAA 61.911 60.000 0.00 0.00 0.00 4.52
423 424 2.285368 AGGGATCGTTGGGAGGCA 60.285 61.111 0.00 0.00 0.00 4.75
424 425 2.506472 GAGGGATCGTTGGGAGGC 59.494 66.667 0.00 0.00 0.00 4.70
425 426 0.105658 TAGGAGGGATCGTTGGGAGG 60.106 60.000 0.00 0.00 0.00 4.30
426 427 1.789523 TTAGGAGGGATCGTTGGGAG 58.210 55.000 0.00 0.00 0.00 4.30
427 428 2.489528 ATTAGGAGGGATCGTTGGGA 57.510 50.000 0.00 0.00 0.00 4.37
428 429 3.006967 CACTATTAGGAGGGATCGTTGGG 59.993 52.174 0.00 0.00 0.00 4.12
429 430 3.641906 ACACTATTAGGAGGGATCGTTGG 59.358 47.826 0.00 0.00 0.00 3.77
430 431 4.341235 TCACACTATTAGGAGGGATCGTTG 59.659 45.833 0.00 0.00 0.00 4.10
431 432 4.543689 TCACACTATTAGGAGGGATCGTT 58.456 43.478 0.00 0.00 0.00 3.85
432 433 4.141228 TCTCACACTATTAGGAGGGATCGT 60.141 45.833 0.00 0.00 0.00 3.73
433 434 4.399219 TCTCACACTATTAGGAGGGATCG 58.601 47.826 0.00 0.00 0.00 3.69
434 435 5.420739 GGATCTCACACTATTAGGAGGGATC 59.579 48.000 11.00 11.00 0.00 3.36
435 436 5.337788 GGATCTCACACTATTAGGAGGGAT 58.662 45.833 0.00 0.00 0.00 3.85
436 437 4.449376 GGGATCTCACACTATTAGGAGGGA 60.449 50.000 0.00 0.00 0.00 4.20
437 438 3.835395 GGGATCTCACACTATTAGGAGGG 59.165 52.174 0.00 0.00 0.00 4.30
438 439 3.835395 GGGGATCTCACACTATTAGGAGG 59.165 52.174 0.00 0.00 0.00 4.30
439 440 4.483950 TGGGGATCTCACACTATTAGGAG 58.516 47.826 0.00 0.00 0.00 3.69
440 441 4.552883 TGGGGATCTCACACTATTAGGA 57.447 45.455 0.00 0.00 0.00 2.94
441 442 5.832539 ATTGGGGATCTCACACTATTAGG 57.167 43.478 0.00 0.00 0.00 2.69
442 443 7.233553 TGAGTATTGGGGATCTCACACTATTAG 59.766 40.741 0.00 0.00 32.95 1.73
443 444 7.073208 TGAGTATTGGGGATCTCACACTATTA 58.927 38.462 0.00 0.00 32.95 0.98
444 445 5.905331 TGAGTATTGGGGATCTCACACTATT 59.095 40.000 0.00 0.00 32.95 1.73
445 446 5.467738 TGAGTATTGGGGATCTCACACTAT 58.532 41.667 0.00 0.00 32.95 2.12
446 447 4.878968 TGAGTATTGGGGATCTCACACTA 58.121 43.478 0.00 0.00 32.95 2.74
447 448 3.724478 TGAGTATTGGGGATCTCACACT 58.276 45.455 0.00 0.00 32.95 3.55
448 449 4.162320 TCTTGAGTATTGGGGATCTCACAC 59.838 45.833 0.00 0.00 36.80 3.82
449 450 4.361783 TCTTGAGTATTGGGGATCTCACA 58.638 43.478 0.00 0.00 36.80 3.58
450 451 5.119694 GTTCTTGAGTATTGGGGATCTCAC 58.880 45.833 0.00 0.00 36.80 3.51
451 452 4.782691 TGTTCTTGAGTATTGGGGATCTCA 59.217 41.667 0.00 0.00 35.54 3.27
452 453 5.359194 TGTTCTTGAGTATTGGGGATCTC 57.641 43.478 0.00 0.00 0.00 2.75
453 454 5.779241 TTGTTCTTGAGTATTGGGGATCT 57.221 39.130 0.00 0.00 0.00 2.75
454 455 6.834168 TTTTGTTCTTGAGTATTGGGGATC 57.166 37.500 0.00 0.00 0.00 3.36
476 477 5.336770 GCTAACCTGCATAGCCTTTCTTTTT 60.337 40.000 6.55 0.00 39.87 1.94
477 478 4.158579 GCTAACCTGCATAGCCTTTCTTTT 59.841 41.667 6.55 0.00 39.87 2.27
478 479 3.696548 GCTAACCTGCATAGCCTTTCTTT 59.303 43.478 6.55 0.00 39.87 2.52
479 480 3.282885 GCTAACCTGCATAGCCTTTCTT 58.717 45.455 6.55 0.00 39.87 2.52
480 481 2.924421 GCTAACCTGCATAGCCTTTCT 58.076 47.619 6.55 0.00 39.87 2.52
494 495 4.039366 AGAAGGATATCGTGAAGGCTAACC 59.961 45.833 0.00 0.00 0.00 2.85
495 496 5.203060 AGAAGGATATCGTGAAGGCTAAC 57.797 43.478 0.00 0.00 0.00 2.34
496 497 5.362717 TCAAGAAGGATATCGTGAAGGCTAA 59.637 40.000 0.00 0.00 35.38 3.09
497 498 4.893524 TCAAGAAGGATATCGTGAAGGCTA 59.106 41.667 0.00 0.00 35.38 3.93
498 499 3.706594 TCAAGAAGGATATCGTGAAGGCT 59.293 43.478 0.00 0.00 35.38 4.58
499 500 4.054671 CTCAAGAAGGATATCGTGAAGGC 58.945 47.826 0.00 0.00 37.37 4.35
500 501 4.054671 GCTCAAGAAGGATATCGTGAAGG 58.945 47.826 0.00 0.00 37.37 3.46
501 502 4.505922 GTGCTCAAGAAGGATATCGTGAAG 59.494 45.833 0.00 0.00 37.37 3.02
502 503 4.160439 AGTGCTCAAGAAGGATATCGTGAA 59.840 41.667 0.00 0.00 37.37 3.18
503 504 3.701542 AGTGCTCAAGAAGGATATCGTGA 59.298 43.478 0.00 0.00 35.83 4.35
504 505 4.052159 AGTGCTCAAGAAGGATATCGTG 57.948 45.455 0.00 0.00 0.00 4.35
505 506 4.160439 TCAAGTGCTCAAGAAGGATATCGT 59.840 41.667 0.00 0.00 0.00 3.73
506 507 4.686972 TCAAGTGCTCAAGAAGGATATCG 58.313 43.478 0.00 0.00 0.00 2.92
507 508 7.565323 AATTCAAGTGCTCAAGAAGGATATC 57.435 36.000 0.00 0.00 0.00 1.63
508 509 7.951347 AAATTCAAGTGCTCAAGAAGGATAT 57.049 32.000 0.00 0.00 0.00 1.63
509 510 7.765695 AAAATTCAAGTGCTCAAGAAGGATA 57.234 32.000 0.00 0.00 0.00 2.59
510 511 6.661304 AAAATTCAAGTGCTCAAGAAGGAT 57.339 33.333 0.00 0.00 0.00 3.24
511 512 6.127366 ACAAAAATTCAAGTGCTCAAGAAGGA 60.127 34.615 0.00 0.00 0.00 3.36
512 513 6.044682 ACAAAAATTCAAGTGCTCAAGAAGG 58.955 36.000 0.00 0.00 0.00 3.46
513 514 7.529880 AACAAAAATTCAAGTGCTCAAGAAG 57.470 32.000 0.00 0.00 0.00 2.85
514 515 7.903995 AAACAAAAATTCAAGTGCTCAAGAA 57.096 28.000 0.00 0.00 0.00 2.52
515 516 7.387397 ACAAAACAAAAATTCAAGTGCTCAAGA 59.613 29.630 0.00 0.00 0.00 3.02
516 517 7.479291 CACAAAACAAAAATTCAAGTGCTCAAG 59.521 33.333 0.00 0.00 0.00 3.02
517 518 7.172190 TCACAAAACAAAAATTCAAGTGCTCAA 59.828 29.630 0.00 0.00 0.00 3.02
518 519 6.648310 TCACAAAACAAAAATTCAAGTGCTCA 59.352 30.769 0.00 0.00 0.00 4.26
519 520 7.059448 TCACAAAACAAAAATTCAAGTGCTC 57.941 32.000 0.00 0.00 0.00 4.26
520 521 6.873076 TCTCACAAAACAAAAATTCAAGTGCT 59.127 30.769 0.00 0.00 0.00 4.40
521 522 6.955407 GTCTCACAAAACAAAAATTCAAGTGC 59.045 34.615 0.00 0.00 0.00 4.40
522 523 8.016497 TGTCTCACAAAACAAAAATTCAAGTG 57.984 30.769 0.00 0.00 0.00 3.16
523 524 8.776376 ATGTCTCACAAAACAAAAATTCAAGT 57.224 26.923 0.00 0.00 0.00 3.16
524 525 9.480538 CAATGTCTCACAAAACAAAAATTCAAG 57.519 29.630 0.00 0.00 0.00 3.02
525 526 9.212641 TCAATGTCTCACAAAACAAAAATTCAA 57.787 25.926 0.00 0.00 0.00 2.69
526 527 8.768957 TCAATGTCTCACAAAACAAAAATTCA 57.231 26.923 0.00 0.00 0.00 2.57
528 529 9.991388 CAATCAATGTCTCACAAAACAAAAATT 57.009 25.926 0.00 0.00 0.00 1.82
529 530 9.381033 TCAATCAATGTCTCACAAAACAAAAAT 57.619 25.926 0.00 0.00 0.00 1.82
530 531 8.768957 TCAATCAATGTCTCACAAAACAAAAA 57.231 26.923 0.00 0.00 0.00 1.94
531 532 8.249638 TCTCAATCAATGTCTCACAAAACAAAA 58.750 29.630 0.00 0.00 0.00 2.44
532 533 7.770201 TCTCAATCAATGTCTCACAAAACAAA 58.230 30.769 0.00 0.00 0.00 2.83
533 534 7.332213 TCTCAATCAATGTCTCACAAAACAA 57.668 32.000 0.00 0.00 0.00 2.83
534 535 6.940831 TCTCAATCAATGTCTCACAAAACA 57.059 33.333 0.00 0.00 0.00 2.83
535 536 9.334693 GTATTCTCAATCAATGTCTCACAAAAC 57.665 33.333 0.00 0.00 0.00 2.43
536 537 9.065798 TGTATTCTCAATCAATGTCTCACAAAA 57.934 29.630 0.00 0.00 0.00 2.44
537 538 8.620116 TGTATTCTCAATCAATGTCTCACAAA 57.380 30.769 0.00 0.00 0.00 2.83
538 539 8.620116 TTGTATTCTCAATCAATGTCTCACAA 57.380 30.769 0.00 0.00 0.00 3.33
539 540 8.797350 ATTGTATTCTCAATCAATGTCTCACA 57.203 30.769 0.00 0.00 33.43 3.58
892 893 2.403378 GCCGTGCTCTCTCTCTCGT 61.403 63.158 0.00 0.00 0.00 4.18
1045 1046 4.314440 AGGCATGTCCACACGCGT 62.314 61.111 5.58 5.58 35.67 6.01
1091 1092 2.036733 TGAGAAACCCTTCGATCAACGT 59.963 45.455 0.00 0.00 43.13 3.99
1125 1126 2.819422 CGTAGAACGGACGATTCTGA 57.181 50.000 14.97 0.00 42.98 3.27
1282 1283 6.431852 TGATCTTCTTGCAGTTCATTCATCAA 59.568 34.615 0.00 0.00 0.00 2.57
1305 1306 1.532523 TGCGCAACCATTCTTCATGA 58.467 45.000 8.16 0.00 34.31 3.07
1625 1626 7.976175 GGTCACTTCTTCTCTTTTTGTTTCAAT 59.024 33.333 0.00 0.00 0.00 2.57
1793 1796 2.092968 CAGTTGGCCCATTAGTCTAGCA 60.093 50.000 0.00 0.00 0.00 3.49
1881 1885 7.395190 AGTTTCAGCATTATGATTTACTGCA 57.605 32.000 0.00 0.00 35.32 4.41
1916 1920 5.690865 TGGCTCCGGAATAATTCAATTAGT 58.309 37.500 5.23 0.00 0.00 2.24
2184 2189 1.198713 AAACACCACAAACCCATGCA 58.801 45.000 0.00 0.00 0.00 3.96
2187 2192 2.604139 CCCTAAACACCACAAACCCAT 58.396 47.619 0.00 0.00 0.00 4.00
2210 2215 1.020437 GTCCTAGCGGTTACTAGCGT 58.980 55.000 0.00 0.00 46.45 5.07
2215 2220 2.032620 CCATCTGTCCTAGCGGTTACT 58.967 52.381 0.00 0.00 0.00 2.24
2256 2261 7.504238 CAGTCTCACTATGTATACCTTCCTTCT 59.496 40.741 0.00 0.00 0.00 2.85
2342 2350 6.971756 CCAAAATTTAAGTGCAAAACAAAGGG 59.028 34.615 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.