Multiple sequence alignment - TraesCS5B01G092000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G092000 chr5B 100.000 5042 0 0 1 5042 120944879 120949920 0.000000e+00 9311.0
1 TraesCS5B01G092000 chr5B 78.524 759 97 40 3636 4362 120549190 120549914 5.990000e-119 438.0
2 TraesCS5B01G092000 chr5B 84.390 410 55 7 2145 2549 120547738 120548143 1.320000e-105 394.0
3 TraesCS5B01G092000 chr5B 86.154 130 13 4 631 756 69643402 69643530 8.800000e-28 135.0
4 TraesCS5B01G092000 chr5A 95.039 2318 76 16 2013 4296 114681335 114683647 0.000000e+00 3607.0
5 TraesCS5B01G092000 chr5A 96.612 1092 32 3 805 1891 114680004 114681095 0.000000e+00 1807.0
6 TraesCS5B01G092000 chr5A 88.991 218 22 2 4589 4804 114691052 114691269 8.320000e-68 268.0
7 TraesCS5B01G092000 chr5A 95.276 127 3 1 1888 2014 114681131 114681254 1.110000e-46 198.0
8 TraesCS5B01G092000 chr5D 94.651 2075 51 26 2386 4434 111945514 111947554 0.000000e+00 3162.0
9 TraesCS5B01G092000 chr5D 92.969 1081 48 14 830 1891 111943722 111944793 0.000000e+00 1550.0
10 TraesCS5B01G092000 chr5D 94.935 691 31 3 1888 2577 111944829 111945516 0.000000e+00 1079.0
11 TraesCS5B01G092000 chr5D 91.403 221 17 2 4585 4804 111947556 111947775 8.200000e-78 302.0
12 TraesCS5B01G092000 chr6D 87.747 759 86 6 1 755 15150627 15151382 0.000000e+00 880.0
13 TraesCS5B01G092000 chr6D 87.220 759 89 7 1 754 348093348 348092593 0.000000e+00 857.0
14 TraesCS5B01G092000 chr6A 87.566 756 89 5 1 753 5567422 5568175 0.000000e+00 870.0
15 TraesCS5B01G092000 chr6A 84.676 757 107 9 4 755 544105187 544104435 0.000000e+00 747.0
16 TraesCS5B01G092000 chr1A 83.443 761 116 10 1 755 519821723 519820967 0.000000e+00 699.0
17 TraesCS5B01G092000 chr1A 91.736 242 19 1 4801 5042 451351869 451351629 8.090000e-88 335.0
18 TraesCS5B01G092000 chr7B 95.082 427 21 0 1 427 161638228 161638654 0.000000e+00 673.0
19 TraesCS5B01G092000 chr7B 81.194 787 115 21 1 755 605983383 605982598 2.010000e-168 603.0
20 TraesCS5B01G092000 chr7B 93.636 330 21 0 422 751 161647252 161647581 1.260000e-135 494.0
21 TraesCS5B01G092000 chr7B 94.606 241 13 0 4802 5042 18497110 18496870 1.710000e-99 374.0
22 TraesCS5B01G092000 chr7B 88.462 156 18 0 584 739 538265152 538265307 6.660000e-44 189.0
23 TraesCS5B01G092000 chr7B 77.596 183 24 7 4420 4589 655260701 655260879 1.490000e-15 95.3
24 TraesCS5B01G092000 chr3B 83.198 738 114 6 1 730 53934403 53935138 0.000000e+00 667.0
25 TraesCS5B01G092000 chr3B 94.161 137 5 3 4453 4587 4226160 4226295 6.620000e-49 206.0
26 TraesCS5B01G092000 chr1B 81.974 760 129 7 1 754 588148588 588149345 5.510000e-179 638.0
27 TraesCS5B01G092000 chr1B 94.074 135 7 1 4453 4586 628047136 628047270 2.380000e-48 204.0
28 TraesCS5B01G092000 chr1B 78.142 183 23 7 4420 4589 169364865 169365043 3.210000e-17 100.0
29 TraesCS5B01G092000 chr2A 81.486 767 125 14 1 755 14495686 14496447 9.280000e-172 614.0
30 TraesCS5B01G092000 chr2A 88.485 165 11 4 4430 4588 762748142 762747980 5.150000e-45 193.0
31 TraesCS5B01G092000 chr1D 95.021 241 12 0 4802 5042 420202480 420202720 3.680000e-101 379.0
32 TraesCS5B01G092000 chr1D 92.562 242 17 1 4802 5042 463992834 463992593 3.740000e-91 346.0
33 TraesCS5B01G092000 chr3D 94.191 241 13 1 4802 5042 594576538 594576299 2.870000e-97 366.0
34 TraesCS5B01G092000 chr3D 90.260 154 9 4 4433 4584 588408121 588408270 3.980000e-46 196.0
35 TraesCS5B01G092000 chr2D 93.776 241 15 0 4802 5042 372699547 372699787 3.710000e-96 363.0
36 TraesCS5B01G092000 chr2D 92.149 242 18 1 4802 5042 93076676 93076917 1.740000e-89 340.0
37 TraesCS5B01G092000 chr2D 87.574 169 12 8 4434 4594 420895139 420894972 2.400000e-43 187.0
38 TraesCS5B01G092000 chr2B 93.776 241 15 0 4802 5042 53444732 53444972 3.710000e-96 363.0
39 TraesCS5B01G092000 chr2B 96.154 130 4 1 4456 4584 5757115 5756986 1.420000e-50 211.0
40 TraesCS5B01G092000 chr2B 88.820 161 11 4 4433 4587 121813314 121813155 1.850000e-44 191.0
41 TraesCS5B01G092000 chr7D 92.562 242 17 1 4802 5042 543332731 543332972 3.740000e-91 346.0
42 TraesCS5B01G092000 chr7A 94.853 136 6 1 4456 4590 48903881 48903746 1.420000e-50 211.0
43 TraesCS5B01G092000 chr4D 94.118 136 6 2 4458 4591 93079332 93079197 6.620000e-49 206.0
44 TraesCS5B01G092000 chr3A 78.142 183 23 7 4420 4589 630360146 630359968 3.210000e-17 100.0
45 TraesCS5B01G092000 chr4B 77.049 183 24 8 4420 4589 233693948 233694125 6.950000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G092000 chr5B 120944879 120949920 5041 False 9311.000000 9311 100.000000 1 5042 1 chr5B.!!$F2 5041
1 TraesCS5B01G092000 chr5B 120547738 120549914 2176 False 416.000000 438 81.457000 2145 4362 2 chr5B.!!$F3 2217
2 TraesCS5B01G092000 chr5A 114680004 114683647 3643 False 1870.666667 3607 95.642333 805 4296 3 chr5A.!!$F2 3491
3 TraesCS5B01G092000 chr5D 111943722 111947775 4053 False 1523.250000 3162 93.489500 830 4804 4 chr5D.!!$F1 3974
4 TraesCS5B01G092000 chr6D 15150627 15151382 755 False 880.000000 880 87.747000 1 755 1 chr6D.!!$F1 754
5 TraesCS5B01G092000 chr6D 348092593 348093348 755 True 857.000000 857 87.220000 1 754 1 chr6D.!!$R1 753
6 TraesCS5B01G092000 chr6A 5567422 5568175 753 False 870.000000 870 87.566000 1 753 1 chr6A.!!$F1 752
7 TraesCS5B01G092000 chr6A 544104435 544105187 752 True 747.000000 747 84.676000 4 755 1 chr6A.!!$R1 751
8 TraesCS5B01G092000 chr1A 519820967 519821723 756 True 699.000000 699 83.443000 1 755 1 chr1A.!!$R2 754
9 TraesCS5B01G092000 chr7B 605982598 605983383 785 True 603.000000 603 81.194000 1 755 1 chr7B.!!$R2 754
10 TraesCS5B01G092000 chr3B 53934403 53935138 735 False 667.000000 667 83.198000 1 730 1 chr3B.!!$F2 729
11 TraesCS5B01G092000 chr1B 588148588 588149345 757 False 638.000000 638 81.974000 1 754 1 chr1B.!!$F2 753
12 TraesCS5B01G092000 chr2A 14495686 14496447 761 False 614.000000 614 81.486000 1 755 1 chr2A.!!$F1 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
569 603 0.105593 CCACCATCGCTACTGCATCT 59.894 55.0 0.00 0.0 39.64 2.90 F
776 822 0.108019 CTAACCCCGGGAATACAGCC 59.892 60.0 26.32 0.0 0.00 4.85 F
2313 2502 0.319555 TCTCCGCCAAAGACAGTTCG 60.320 55.0 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2454 2830 1.003839 GTTCACAGATCCCCGTGCA 60.004 57.895 3.28 0.0 33.03 4.57 R
2692 3074 6.655425 ACCAGGAGTAGAAAAGTAAAGCATTC 59.345 38.462 0.00 0.0 0.00 2.67 R
4076 4578 0.391793 GGCTGGTTACCTCACTGCTC 60.392 60.000 2.07 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.266055 CCCTTCACTCTCGCCCAC 59.734 66.667 0.00 0.00 0.00 4.61
56 57 7.646922 CACACCGGTATCTTGTTTAGTCTATAC 59.353 40.741 6.87 0.00 0.00 1.47
86 87 4.576463 ACATCTGAAAAGCCATCGTATTCC 59.424 41.667 0.00 0.00 0.00 3.01
287 312 2.358247 ATGGTGTGGACGCGGAAC 60.358 61.111 12.47 6.06 0.00 3.62
290 315 3.041940 GTGTGGACGCGGAACAGG 61.042 66.667 12.47 0.00 0.00 4.00
347 372 3.252974 TCTTCCGAGAAATCAAGCTCC 57.747 47.619 0.00 0.00 0.00 4.70
359 384 4.851214 AGCTCCTCCTCCTCCCGC 62.851 72.222 0.00 0.00 0.00 6.13
437 465 1.145945 TCGCCATACTCCTCCTCATCT 59.854 52.381 0.00 0.00 0.00 2.90
449 477 1.007600 TCCTCATCTTCCTCTGCCTGA 59.992 52.381 0.00 0.00 0.00 3.86
475 503 2.417933 GCACATCTTGCGAACTCTGATT 59.582 45.455 0.00 0.00 42.79 2.57
504 532 1.723288 CTTCCCCCTAGTCTCATCCC 58.277 60.000 0.00 0.00 0.00 3.85
505 533 1.221781 CTTCCCCCTAGTCTCATCCCT 59.778 57.143 0.00 0.00 0.00 4.20
509 537 1.148027 CCCCTAGTCTCATCCCTAGCA 59.852 57.143 0.00 0.00 31.29 3.49
511 539 2.158385 CCCTAGTCTCATCCCTAGCACT 60.158 54.545 0.00 0.00 31.29 4.40
520 554 2.840102 CCTAGCACTCCCCCTCGG 60.840 72.222 0.00 0.00 0.00 4.63
530 564 3.068691 CCCCTCGGCGTCTCTGAA 61.069 66.667 6.85 0.00 0.00 3.02
569 603 0.105593 CCACCATCGCTACTGCATCT 59.894 55.000 0.00 0.00 39.64 2.90
609 647 1.227823 CCTTGCACCTGGTTCGTCA 60.228 57.895 0.00 0.00 0.00 4.35
642 680 3.394874 CACGCACACACGACGGAG 61.395 66.667 0.00 0.00 36.70 4.63
649 687 1.446099 CACACGACGGAGGGTGATG 60.446 63.158 8.82 0.00 38.96 3.07
668 707 1.810030 GATCTCACCGACGGCCAAC 60.810 63.158 15.39 0.00 0.00 3.77
671 711 2.280524 TCACCGACGGCCAACAAG 60.281 61.111 15.39 0.00 0.00 3.16
773 819 4.385478 AAAAACTAACCCCGGGAATACA 57.615 40.909 26.32 0.44 0.00 2.29
774 820 3.639672 AAACTAACCCCGGGAATACAG 57.360 47.619 26.32 13.76 0.00 2.74
775 821 0.835276 ACTAACCCCGGGAATACAGC 59.165 55.000 26.32 0.00 0.00 4.40
776 822 0.108019 CTAACCCCGGGAATACAGCC 59.892 60.000 26.32 0.00 0.00 4.85
777 823 0.620990 TAACCCCGGGAATACAGCCA 60.621 55.000 26.32 0.00 0.00 4.75
778 824 1.286305 AACCCCGGGAATACAGCCAT 61.286 55.000 26.32 0.00 0.00 4.40
779 825 0.400815 ACCCCGGGAATACAGCCATA 60.401 55.000 26.32 0.00 0.00 2.74
780 826 0.324943 CCCCGGGAATACAGCCATAG 59.675 60.000 26.32 0.00 0.00 2.23
781 827 0.324943 CCCGGGAATACAGCCATAGG 59.675 60.000 18.48 0.00 0.00 2.57
782 828 0.324943 CCGGGAATACAGCCATAGGG 59.675 60.000 0.00 0.00 37.18 3.53
783 829 0.324943 CGGGAATACAGCCATAGGGG 59.675 60.000 0.00 0.00 40.85 4.79
784 830 1.742308 GGGAATACAGCCATAGGGGA 58.258 55.000 0.00 0.00 40.01 4.81
785 831 2.062636 GGGAATACAGCCATAGGGGAA 58.937 52.381 0.00 0.00 40.01 3.97
786 832 2.445525 GGGAATACAGCCATAGGGGAAA 59.554 50.000 0.00 0.00 40.01 3.13
787 833 3.117284 GGGAATACAGCCATAGGGGAAAA 60.117 47.826 0.00 0.00 40.01 2.29
788 834 4.542697 GGAATACAGCCATAGGGGAAAAA 58.457 43.478 0.00 0.00 40.01 1.94
802 848 4.513777 AAAAACTCCGCCCTTCCC 57.486 55.556 0.00 0.00 0.00 3.97
803 849 1.228769 AAAAACTCCGCCCTTCCCC 60.229 57.895 0.00 0.00 0.00 4.81
822 868 2.103941 CCCCCTTGCTAGCTTTCTCTAG 59.896 54.545 17.23 2.13 39.17 2.43
827 873 5.940470 CCCTTGCTAGCTTTCTCTAGAAAAA 59.060 40.000 17.23 0.00 42.72 1.94
855 901 1.470285 GCTTTACCGTCGATGGCTACA 60.470 52.381 23.85 7.59 0.00 2.74
1048 1094 3.090532 CGAAGGGGGAAGGGGAGG 61.091 72.222 0.00 0.00 0.00 4.30
1051 1097 3.972328 AAGGGGGAAGGGGAGGAGC 62.972 68.421 0.00 0.00 0.00 4.70
1191 1250 2.329267 TCTACTAGGTCGACGGGGATA 58.671 52.381 9.92 0.00 0.00 2.59
1194 1253 0.536687 CTAGGTCGACGGGGATAGCA 60.537 60.000 9.92 0.00 0.00 3.49
1333 1394 1.203001 TCTTGTTGGGGTTGGATGGAC 60.203 52.381 0.00 0.00 0.00 4.02
1542 1607 7.565680 TGAATCTACTAGTGAAAGATTTCCCC 58.434 38.462 16.79 7.96 39.46 4.81
1623 1689 5.163663 TGCGCCAAATAGGAGTTAATGAAAG 60.164 40.000 4.18 0.00 41.22 2.62
1674 1740 8.333908 TCAACCGATGATTCAAAAACAAATTTG 58.666 29.630 16.67 16.67 36.08 2.32
1837 1903 4.753107 TGGTGCAGTTACTTTGCTACTTAC 59.247 41.667 0.00 0.00 42.02 2.34
1863 1929 2.676121 CCTCCCCGTGCATTGCAA 60.676 61.111 13.94 0.00 41.47 4.08
1953 2058 6.486993 GGTTCTTCTTCATTTTGGAGTGTACT 59.513 38.462 0.00 0.00 0.00 2.73
1954 2059 7.660208 GGTTCTTCTTCATTTTGGAGTGTACTA 59.340 37.037 0.00 0.00 0.00 1.82
1955 2060 8.496751 GTTCTTCTTCATTTTGGAGTGTACTAC 58.503 37.037 0.00 0.00 0.00 2.73
2067 2254 5.832595 TCTCCTAGGAAAGAGTCAGATGATG 59.167 44.000 13.77 0.00 0.00 3.07
2068 2255 5.523588 TCCTAGGAAAGAGTCAGATGATGT 58.476 41.667 9.71 0.00 0.00 3.06
2285 2474 1.846439 GACCTCCATTCTTGATCCCCA 59.154 52.381 0.00 0.00 0.00 4.96
2313 2502 0.319555 TCTCCGCCAAAGACAGTTCG 60.320 55.000 0.00 0.00 0.00 3.95
2454 2830 2.360350 CCGCCCATGCAAGTCTGT 60.360 61.111 0.00 0.00 37.32 3.41
2692 3074 4.456911 TCAGTAGGTACAGTTACTTGACCG 59.543 45.833 6.76 0.00 35.24 4.79
2710 3092 6.476243 TGACCGAATGCTTTACTTTTCTAC 57.524 37.500 0.00 0.00 0.00 2.59
2789 3274 3.041946 CTCATAGGGGGTGCTCTAAAGT 58.958 50.000 0.00 0.00 0.00 2.66
3107 3599 5.536554 AGAAACTGCATATTTGACTCGTG 57.463 39.130 1.05 0.00 0.00 4.35
3108 3600 3.747099 AACTGCATATTTGACTCGTGC 57.253 42.857 0.00 0.00 36.39 5.34
3165 3657 5.356751 TGTGTGTGTTCTTTGTATGCTTTCT 59.643 36.000 0.00 0.00 0.00 2.52
3466 3961 4.656041 CTGTGCTTGTTTAGAGCTTATGC 58.344 43.478 0.00 0.00 40.75 3.14
3602 4104 3.672767 TCTACTTCCTCCGTTCCAAAC 57.327 47.619 0.00 0.00 0.00 2.93
3610 4112 5.486735 TCCTCCGTTCCAAACTAAATGTA 57.513 39.130 0.00 0.00 0.00 2.29
3870 4372 2.682494 TACGTCCCAGGGCTCACC 60.682 66.667 0.00 0.00 40.67 4.02
3930 4432 1.007271 CAGTGTCGCGTTCAGTCCT 60.007 57.895 5.77 0.00 0.00 3.85
4007 4509 3.077556 CGGTGGCCAGCTCTACCT 61.078 66.667 30.86 0.00 0.00 3.08
4056 4558 2.939103 CAAGTAGCCTGTATGAGTTGCC 59.061 50.000 0.00 0.00 0.00 4.52
4076 4578 2.417379 CCGACAGACATAGTGAACCCAG 60.417 54.545 0.00 0.00 0.00 4.45
4107 4609 0.034089 AACCAGCCCTATGAGTTGCC 60.034 55.000 0.00 0.00 0.00 4.52
4189 4693 4.517453 TGGTTTCCTGTATGAAAAACCTCG 59.483 41.667 14.79 0.00 46.93 4.63
4210 4719 3.619483 CGTGGATGCTTCGGTTAATGTTA 59.381 43.478 0.00 0.00 0.00 2.41
4246 4774 7.124901 CCTGATATTACTATGTCTGTATGGGCT 59.875 40.741 0.00 0.00 0.00 5.19
4288 4820 1.268352 GTTACGCATGGGTTTCTGCAA 59.732 47.619 21.44 5.08 38.30 4.08
4318 4850 9.219603 CCATGGATGTGGTTAATATGTAAGTAG 57.780 37.037 5.56 0.00 34.46 2.57
4407 4941 1.166531 GGTGTGGCTGGTGAGTTCAC 61.167 60.000 3.67 3.67 45.72 3.18
4434 4968 6.605194 TGTGGAGCCATACAAATAAGCAAATA 59.395 34.615 0.00 0.00 0.00 1.40
4435 4969 6.918022 GTGGAGCCATACAAATAAGCAAATAC 59.082 38.462 0.00 0.00 0.00 1.89
4436 4970 6.833416 TGGAGCCATACAAATAAGCAAATACT 59.167 34.615 0.00 0.00 0.00 2.12
4437 4971 7.013274 TGGAGCCATACAAATAAGCAAATACTC 59.987 37.037 0.00 0.00 0.00 2.59
4438 4972 7.277174 AGCCATACAAATAAGCAAATACTCC 57.723 36.000 0.00 0.00 0.00 3.85
4439 4973 6.265422 AGCCATACAAATAAGCAAATACTCCC 59.735 38.462 0.00 0.00 0.00 4.30
4440 4974 6.265422 GCCATACAAATAAGCAAATACTCCCT 59.735 38.462 0.00 0.00 0.00 4.20
4441 4975 7.522236 GCCATACAAATAAGCAAATACTCCCTC 60.522 40.741 0.00 0.00 0.00 4.30
4442 4976 7.040409 CCATACAAATAAGCAAATACTCCCTCC 60.040 40.741 0.00 0.00 0.00 4.30
4443 4977 4.881850 ACAAATAAGCAAATACTCCCTCCG 59.118 41.667 0.00 0.00 0.00 4.63
4444 4978 4.772886 AATAAGCAAATACTCCCTCCGT 57.227 40.909 0.00 0.00 0.00 4.69
4445 4979 4.772886 ATAAGCAAATACTCCCTCCGTT 57.227 40.909 0.00 0.00 0.00 4.44
4446 4980 2.693267 AGCAAATACTCCCTCCGTTC 57.307 50.000 0.00 0.00 0.00 3.95
4447 4981 1.209747 AGCAAATACTCCCTCCGTTCC 59.790 52.381 0.00 0.00 0.00 3.62
4448 4982 1.209747 GCAAATACTCCCTCCGTTCCT 59.790 52.381 0.00 0.00 0.00 3.36
4449 4983 2.433239 GCAAATACTCCCTCCGTTCCTA 59.567 50.000 0.00 0.00 0.00 2.94
4450 4984 3.118519 GCAAATACTCCCTCCGTTCCTAA 60.119 47.826 0.00 0.00 0.00 2.69
4451 4985 4.624604 GCAAATACTCCCTCCGTTCCTAAA 60.625 45.833 0.00 0.00 0.00 1.85
4452 4986 5.681639 CAAATACTCCCTCCGTTCCTAAAT 58.318 41.667 0.00 0.00 0.00 1.40
4453 4987 6.687139 GCAAATACTCCCTCCGTTCCTAAATA 60.687 42.308 0.00 0.00 0.00 1.40
4454 4988 7.450903 CAAATACTCCCTCCGTTCCTAAATAT 58.549 38.462 0.00 0.00 0.00 1.28
4455 4989 8.591072 CAAATACTCCCTCCGTTCCTAAATATA 58.409 37.037 0.00 0.00 0.00 0.86
4456 4990 7.957992 ATACTCCCTCCGTTCCTAAATATAG 57.042 40.000 0.00 0.00 0.00 1.31
4457 4991 5.961897 ACTCCCTCCGTTCCTAAATATAGA 58.038 41.667 0.00 0.00 0.00 1.98
4458 4992 6.563163 ACTCCCTCCGTTCCTAAATATAGAT 58.437 40.000 0.00 0.00 0.00 1.98
4459 4993 7.017531 ACTCCCTCCGTTCCTAAATATAGATT 58.982 38.462 0.00 0.00 0.00 2.40
4460 4994 7.513091 ACTCCCTCCGTTCCTAAATATAGATTT 59.487 37.037 0.35 0.35 38.79 2.17
4461 4995 7.904205 TCCCTCCGTTCCTAAATATAGATTTC 58.096 38.462 0.00 0.00 36.62 2.17
4462 4996 7.511371 TCCCTCCGTTCCTAAATATAGATTTCA 59.489 37.037 0.00 0.00 36.62 2.69
4463 4997 8.154856 CCCTCCGTTCCTAAATATAGATTTCAA 58.845 37.037 0.00 0.00 36.62 2.69
4464 4998 8.989980 CCTCCGTTCCTAAATATAGATTTCAAC 58.010 37.037 0.00 1.35 36.62 3.18
4465 4999 9.542462 CTCCGTTCCTAAATATAGATTTCAACA 57.458 33.333 0.00 0.00 36.62 3.33
4466 5000 9.893634 TCCGTTCCTAAATATAGATTTCAACAA 57.106 29.630 0.00 0.00 36.62 2.83
4479 5013 9.745880 ATAGATTTCAACAAGTACTACATACGG 57.254 33.333 0.00 0.00 38.97 4.02
4480 5014 7.833786 AGATTTCAACAAGTACTACATACGGA 58.166 34.615 0.00 0.00 38.97 4.69
4481 5015 7.974501 AGATTTCAACAAGTACTACATACGGAG 59.025 37.037 0.00 0.00 38.97 4.63
4482 5016 4.990257 TCAACAAGTACTACATACGGAGC 58.010 43.478 0.00 0.00 38.97 4.70
4483 5017 4.460034 TCAACAAGTACTACATACGGAGCA 59.540 41.667 0.00 0.00 38.97 4.26
4484 5018 5.047872 TCAACAAGTACTACATACGGAGCAA 60.048 40.000 0.00 0.00 38.97 3.91
4485 5019 5.395682 ACAAGTACTACATACGGAGCAAA 57.604 39.130 0.00 0.00 38.97 3.68
4486 5020 5.786311 ACAAGTACTACATACGGAGCAAAA 58.214 37.500 0.00 0.00 38.97 2.44
4487 5021 6.403878 ACAAGTACTACATACGGAGCAAAAT 58.596 36.000 0.00 0.00 38.97 1.82
4488 5022 6.312918 ACAAGTACTACATACGGAGCAAAATG 59.687 38.462 0.00 0.00 38.97 2.32
4489 5023 6.216801 AGTACTACATACGGAGCAAAATGA 57.783 37.500 0.00 0.00 38.97 2.57
4490 5024 6.273825 AGTACTACATACGGAGCAAAATGAG 58.726 40.000 0.00 0.00 38.97 2.90
4491 5025 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4492 5026 5.488341 ACTACATACGGAGCAAAATGAGTT 58.512 37.500 0.00 0.00 0.00 3.01
4493 5027 6.636705 ACTACATACGGAGCAAAATGAGTTA 58.363 36.000 0.00 0.00 0.00 2.24
4494 5028 7.101054 ACTACATACGGAGCAAAATGAGTTAA 58.899 34.615 0.00 0.00 0.00 2.01
4495 5029 7.769044 ACTACATACGGAGCAAAATGAGTTAAT 59.231 33.333 0.00 0.00 0.00 1.40
4496 5030 9.256477 CTACATACGGAGCAAAATGAGTTAATA 57.744 33.333 0.00 0.00 0.00 0.98
4497 5031 8.677148 ACATACGGAGCAAAATGAGTTAATAT 57.323 30.769 0.00 0.00 0.00 1.28
4498 5032 9.772973 ACATACGGAGCAAAATGAGTTAATATA 57.227 29.630 0.00 0.00 0.00 0.86
4500 5034 9.772973 ATACGGAGCAAAATGAGTTAATATACA 57.227 29.630 0.00 0.00 0.00 2.29
4501 5035 7.916552 ACGGAGCAAAATGAGTTAATATACAC 58.083 34.615 0.00 0.00 0.00 2.90
4502 5036 7.769044 ACGGAGCAAAATGAGTTAATATACACT 59.231 33.333 0.00 0.00 0.00 3.55
4503 5037 8.612619 CGGAGCAAAATGAGTTAATATACACTT 58.387 33.333 0.00 0.00 0.00 3.16
4525 5059 9.988350 CACTTTAAAACATGTCTACATACATCC 57.012 33.333 0.00 0.00 38.01 3.51
4526 5060 8.879759 ACTTTAAAACATGTCTACATACATCCG 58.120 33.333 0.00 0.00 38.01 4.18
4527 5061 8.780846 TTTAAAACATGTCTACATACATCCGT 57.219 30.769 0.00 0.00 38.01 4.69
4528 5062 9.872721 TTTAAAACATGTCTACATACATCCGTA 57.127 29.630 0.00 0.00 38.01 4.02
4540 5074 5.838529 CATACATCCGTATGTGGTAGTTCA 58.161 41.667 3.56 0.00 46.70 3.18
4541 5075 6.455647 CATACATCCGTATGTGGTAGTTCAT 58.544 40.000 3.56 0.00 46.70 2.57
4542 5076 5.353394 ACATCCGTATGTGGTAGTTCATT 57.647 39.130 0.00 0.00 44.79 2.57
4543 5077 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
4544 5078 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
4545 5079 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
4546 5080 5.795972 TCCGTATGTGGTAGTTCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
4547 5081 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
4548 5082 6.882140 TCCGTATGTGGTAGTTCATTTGAAAT 59.118 34.615 0.00 0.00 35.58 2.17
4549 5083 6.966632 CCGTATGTGGTAGTTCATTTGAAATG 59.033 38.462 11.54 11.54 35.58 2.32
4550 5084 6.468956 CGTATGTGGTAGTTCATTTGAAATGC 59.531 38.462 12.86 2.30 35.58 3.56
4551 5085 6.594788 ATGTGGTAGTTCATTTGAAATGCT 57.405 33.333 12.86 7.94 35.60 3.79
4552 5086 7.701539 ATGTGGTAGTTCATTTGAAATGCTA 57.298 32.000 12.86 7.02 35.60 3.49
4553 5087 7.144722 TGTGGTAGTTCATTTGAAATGCTAG 57.855 36.000 12.86 0.00 35.60 3.42
4554 5088 6.939730 TGTGGTAGTTCATTTGAAATGCTAGA 59.060 34.615 12.86 0.00 35.60 2.43
4555 5089 7.446931 TGTGGTAGTTCATTTGAAATGCTAGAA 59.553 33.333 12.86 0.00 35.60 2.10
4556 5090 8.296713 GTGGTAGTTCATTTGAAATGCTAGAAA 58.703 33.333 12.86 0.00 35.60 2.52
4557 5091 8.514594 TGGTAGTTCATTTGAAATGCTAGAAAG 58.485 33.333 12.86 0.00 35.60 2.62
4558 5092 8.730680 GGTAGTTCATTTGAAATGCTAGAAAGA 58.269 33.333 12.86 0.00 35.60 2.52
4559 5093 9.548208 GTAGTTCATTTGAAATGCTAGAAAGAC 57.452 33.333 12.86 1.37 35.58 3.01
4560 5094 8.169977 AGTTCATTTGAAATGCTAGAAAGACA 57.830 30.769 12.86 0.00 35.58 3.41
4561 5095 8.632679 AGTTCATTTGAAATGCTAGAAAGACAA 58.367 29.630 12.86 0.00 35.58 3.18
4562 5096 9.248291 GTTCATTTGAAATGCTAGAAAGACAAA 57.752 29.630 12.86 0.00 35.58 2.83
4563 5097 9.985730 TTCATTTGAAATGCTAGAAAGACAAAT 57.014 25.926 12.86 0.00 37.24 2.32
4574 5108 8.879759 TGCTAGAAAGACAAATATTTAGGAACG 58.120 33.333 0.00 0.00 0.00 3.95
4575 5109 8.336080 GCTAGAAAGACAAATATTTAGGAACGG 58.664 37.037 0.00 0.00 0.00 4.44
4576 5110 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4577 5111 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4578 5112 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4579 5113 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4580 5114 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4581 5115 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4582 5116 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
4583 5117 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4595 5129 2.364647 GGAGGGAGTACATTTCTACCCG 59.635 54.545 0.00 0.00 41.81 5.28
4600 5134 2.544267 GAGTACATTTCTACCCGCATGC 59.456 50.000 7.91 7.91 0.00 4.06
4652 5187 3.641434 AGATGTGAGACCCATTCCAAG 57.359 47.619 0.00 0.00 0.00 3.61
4667 5202 7.945664 ACCCATTCCAAGTAAACAAATACACTA 59.054 33.333 0.00 0.00 0.00 2.74
4669 5204 9.010029 CCATTCCAAGTAAACAAATACACTACT 57.990 33.333 0.00 0.00 0.00 2.57
4672 5207 7.970102 TCCAAGTAAACAAATACACTACTCCT 58.030 34.615 0.00 0.00 0.00 3.69
4696 5231 9.202273 CCTCTAATGTGAGAATAATACTCTTGC 57.798 37.037 0.00 0.00 36.23 4.01
4704 5239 9.495754 GTGAGAATAATACTCTTGCAAAATCAC 57.504 33.333 0.00 0.00 35.66 3.06
4720 5255 8.593842 TGCAAAATCACGAATTATTAATGCAAG 58.406 29.630 0.00 0.00 36.21 4.01
4725 5260 9.716507 AATCACGAATTATTAATGCAAGTACAC 57.283 29.630 0.00 0.00 0.00 2.90
4741 5276 1.981256 ACACGGCTCCAACTCAAAAT 58.019 45.000 0.00 0.00 0.00 1.82
4746 5281 1.200020 GGCTCCAACTCAAAATCACGG 59.800 52.381 0.00 0.00 0.00 4.94
4769 5304 4.695928 GTCTTGATTTTAGTTTCTCGGGCT 59.304 41.667 0.00 0.00 0.00 5.19
4772 5307 6.370718 TCTTGATTTTAGTTTCTCGGGCTAAC 59.629 38.462 0.00 0.00 0.00 2.34
4775 5310 3.604875 TTAGTTTCTCGGGCTAACCAG 57.395 47.619 0.00 0.00 40.22 4.00
4804 5339 9.341899 CTTTTGGTTTTATACATAGCACAAGAC 57.658 33.333 0.00 0.00 31.99 3.01
4805 5340 7.987750 TTGGTTTTATACATAGCACAAGACA 57.012 32.000 0.00 0.00 0.00 3.41
4806 5341 7.987750 TGGTTTTATACATAGCACAAGACAA 57.012 32.000 0.00 0.00 0.00 3.18
4807 5342 7.812648 TGGTTTTATACATAGCACAAGACAAC 58.187 34.615 0.00 0.00 0.00 3.32
4808 5343 7.445707 TGGTTTTATACATAGCACAAGACAACA 59.554 33.333 0.00 0.00 0.00 3.33
4809 5344 7.749126 GGTTTTATACATAGCACAAGACAACAC 59.251 37.037 0.00 0.00 0.00 3.32
4810 5345 7.971183 TTTATACATAGCACAAGACAACACA 57.029 32.000 0.00 0.00 0.00 3.72
4811 5346 8.560355 TTTATACATAGCACAAGACAACACAT 57.440 30.769 0.00 0.00 0.00 3.21
4812 5347 9.660180 TTTATACATAGCACAAGACAACACATA 57.340 29.630 0.00 0.00 0.00 2.29
4813 5348 9.830975 TTATACATAGCACAAGACAACACATAT 57.169 29.630 0.00 0.00 0.00 1.78
4814 5349 6.426980 ACATAGCACAAGACAACACATATG 57.573 37.500 0.00 0.00 0.00 1.78
4815 5350 6.172630 ACATAGCACAAGACAACACATATGA 58.827 36.000 10.38 0.00 0.00 2.15
4816 5351 6.314648 ACATAGCACAAGACAACACATATGAG 59.685 38.462 10.38 3.79 0.00 2.90
4817 5352 4.898320 AGCACAAGACAACACATATGAGA 58.102 39.130 10.38 0.00 0.00 3.27
4818 5353 5.494724 AGCACAAGACAACACATATGAGAT 58.505 37.500 10.38 0.00 0.00 2.75
4819 5354 5.942236 AGCACAAGACAACACATATGAGATT 59.058 36.000 10.38 0.00 0.00 2.40
4820 5355 6.432162 AGCACAAGACAACACATATGAGATTT 59.568 34.615 10.38 0.00 0.00 2.17
4821 5356 6.525628 GCACAAGACAACACATATGAGATTTG 59.474 38.462 10.38 5.89 0.00 2.32
4822 5357 7.025365 CACAAGACAACACATATGAGATTTGG 58.975 38.462 10.38 0.00 0.00 3.28
4823 5358 6.942005 ACAAGACAACACATATGAGATTTGGA 59.058 34.615 10.38 0.00 0.00 3.53
4824 5359 7.613022 ACAAGACAACACATATGAGATTTGGAT 59.387 33.333 10.38 0.00 0.00 3.41
4825 5360 7.563888 AGACAACACATATGAGATTTGGATG 57.436 36.000 10.38 3.70 0.00 3.51
4826 5361 6.544931 AGACAACACATATGAGATTTGGATGG 59.455 38.462 10.38 0.00 0.00 3.51
4827 5362 6.189859 ACAACACATATGAGATTTGGATGGT 58.810 36.000 10.38 0.00 0.00 3.55
4828 5363 6.095860 ACAACACATATGAGATTTGGATGGTG 59.904 38.462 10.38 5.24 0.00 4.17
4829 5364 5.135383 ACACATATGAGATTTGGATGGTGG 58.865 41.667 10.38 0.00 0.00 4.61
4830 5365 5.135383 CACATATGAGATTTGGATGGTGGT 58.865 41.667 10.38 0.00 0.00 4.16
4831 5366 5.009310 CACATATGAGATTTGGATGGTGGTG 59.991 44.000 10.38 0.00 0.00 4.17
4832 5367 1.838112 TGAGATTTGGATGGTGGTGC 58.162 50.000 0.00 0.00 0.00 5.01
4833 5368 1.355381 TGAGATTTGGATGGTGGTGCT 59.645 47.619 0.00 0.00 0.00 4.40
4834 5369 2.575735 TGAGATTTGGATGGTGGTGCTA 59.424 45.455 0.00 0.00 0.00 3.49
4835 5370 3.202818 TGAGATTTGGATGGTGGTGCTAT 59.797 43.478 0.00 0.00 0.00 2.97
4836 5371 3.559069 AGATTTGGATGGTGGTGCTATG 58.441 45.455 0.00 0.00 0.00 2.23
4837 5372 2.897271 TTTGGATGGTGGTGCTATGT 57.103 45.000 0.00 0.00 0.00 2.29
4838 5373 2.127271 TTGGATGGTGGTGCTATGTG 57.873 50.000 0.00 0.00 0.00 3.21
4839 5374 0.394216 TGGATGGTGGTGCTATGTGC 60.394 55.000 0.00 0.00 43.25 4.57
4849 5384 3.071580 GCTATGTGCACCCAGTCTC 57.928 57.895 15.69 0.00 42.31 3.36
4850 5385 0.807667 GCTATGTGCACCCAGTCTCG 60.808 60.000 15.69 0.00 42.31 4.04
4851 5386 0.817654 CTATGTGCACCCAGTCTCGA 59.182 55.000 15.69 0.00 0.00 4.04
4852 5387 1.204704 CTATGTGCACCCAGTCTCGAA 59.795 52.381 15.69 0.00 0.00 3.71
4853 5388 0.320771 ATGTGCACCCAGTCTCGAAC 60.321 55.000 15.69 0.00 0.00 3.95
4854 5389 1.367840 GTGCACCCAGTCTCGAACT 59.632 57.895 5.22 0.00 39.44 3.01
4855 5390 0.667792 GTGCACCCAGTCTCGAACTC 60.668 60.000 5.22 0.00 35.45 3.01
4856 5391 1.079750 GCACCCAGTCTCGAACTCC 60.080 63.158 0.00 0.00 35.45 3.85
4857 5392 1.213013 CACCCAGTCTCGAACTCCG 59.787 63.158 0.00 0.00 35.45 4.63
4858 5393 1.977544 ACCCAGTCTCGAACTCCGG 60.978 63.158 0.00 0.00 35.45 5.14
4859 5394 2.711922 CCCAGTCTCGAACTCCGGG 61.712 68.421 0.00 8.00 40.97 5.73
4875 5410 2.283824 GGGACGAAAGCCTAGGACA 58.716 57.895 14.75 0.00 0.00 4.02
4876 5411 0.175989 GGGACGAAAGCCTAGGACAG 59.824 60.000 14.75 0.58 0.00 3.51
4877 5412 1.183549 GGACGAAAGCCTAGGACAGA 58.816 55.000 14.75 0.00 0.00 3.41
4878 5413 1.135053 GGACGAAAGCCTAGGACAGAC 60.135 57.143 14.75 0.00 0.00 3.51
4879 5414 0.896226 ACGAAAGCCTAGGACAGACC 59.104 55.000 14.75 0.00 39.35 3.85
4880 5415 0.175989 CGAAAGCCTAGGACAGACCC 59.824 60.000 14.75 0.00 40.05 4.46
4881 5416 0.175989 GAAAGCCTAGGACAGACCCG 59.824 60.000 14.75 0.00 40.05 5.28
4882 5417 0.252103 AAAGCCTAGGACAGACCCGA 60.252 55.000 14.75 0.00 40.05 5.14
4883 5418 0.684805 AAGCCTAGGACAGACCCGAG 60.685 60.000 14.75 0.00 40.05 4.63
4884 5419 1.380112 GCCTAGGACAGACCCGAGT 60.380 63.158 14.75 0.00 40.05 4.18
4885 5420 1.668101 GCCTAGGACAGACCCGAGTG 61.668 65.000 14.75 0.00 40.05 3.51
4886 5421 0.034380 CCTAGGACAGACCCGAGTGA 60.034 60.000 1.05 0.00 40.05 3.41
4887 5422 1.410365 CCTAGGACAGACCCGAGTGAT 60.410 57.143 1.05 0.00 40.05 3.06
4888 5423 2.379972 CTAGGACAGACCCGAGTGATT 58.620 52.381 0.00 0.00 40.05 2.57
4889 5424 2.526888 AGGACAGACCCGAGTGATTA 57.473 50.000 0.00 0.00 40.05 1.75
4890 5425 3.033659 AGGACAGACCCGAGTGATTAT 57.966 47.619 0.00 0.00 40.05 1.28
4891 5426 3.375699 AGGACAGACCCGAGTGATTATT 58.624 45.455 0.00 0.00 40.05 1.40
4892 5427 3.385111 AGGACAGACCCGAGTGATTATTC 59.615 47.826 0.00 0.00 40.05 1.75
4893 5428 3.492829 GGACAGACCCGAGTGATTATTCC 60.493 52.174 0.00 0.00 0.00 3.01
4894 5429 3.375699 ACAGACCCGAGTGATTATTCCT 58.624 45.455 0.00 0.00 0.00 3.36
4895 5430 3.133003 ACAGACCCGAGTGATTATTCCTG 59.867 47.826 0.00 0.00 0.00 3.86
4896 5431 2.700897 AGACCCGAGTGATTATTCCTGG 59.299 50.000 0.00 0.00 0.00 4.45
4897 5432 1.141053 ACCCGAGTGATTATTCCTGGC 59.859 52.381 0.00 0.00 0.00 4.85
4898 5433 1.140852 CCCGAGTGATTATTCCTGGCA 59.859 52.381 0.00 0.00 0.00 4.92
4899 5434 2.421388 CCCGAGTGATTATTCCTGGCAA 60.421 50.000 0.00 0.00 0.00 4.52
4900 5435 3.480470 CCGAGTGATTATTCCTGGCAAT 58.520 45.455 0.00 0.00 0.00 3.56
4901 5436 3.251729 CCGAGTGATTATTCCTGGCAATG 59.748 47.826 0.00 0.00 0.00 2.82
4902 5437 3.251729 CGAGTGATTATTCCTGGCAATGG 59.748 47.826 0.00 0.00 0.00 3.16
4903 5438 2.961062 AGTGATTATTCCTGGCAATGGC 59.039 45.455 0.00 0.00 40.13 4.40
4904 5439 1.955778 TGATTATTCCTGGCAATGGCG 59.044 47.619 1.51 0.00 42.47 5.69
4905 5440 2.229792 GATTATTCCTGGCAATGGCGA 58.770 47.619 1.51 0.00 42.47 5.54
4906 5441 2.363306 TTATTCCTGGCAATGGCGAT 57.637 45.000 1.51 0.00 42.47 4.58
4907 5442 1.608055 TATTCCTGGCAATGGCGATG 58.392 50.000 1.51 0.00 42.47 3.84
4908 5443 0.396139 ATTCCTGGCAATGGCGATGT 60.396 50.000 1.51 0.00 42.47 3.06
4909 5444 0.611618 TTCCTGGCAATGGCGATGTT 60.612 50.000 1.51 0.00 42.47 2.71
4910 5445 0.611618 TCCTGGCAATGGCGATGTTT 60.612 50.000 1.51 0.00 42.47 2.83
4911 5446 0.247185 CCTGGCAATGGCGATGTTTT 59.753 50.000 1.51 0.00 42.47 2.43
4912 5447 1.338011 CCTGGCAATGGCGATGTTTTT 60.338 47.619 1.51 0.00 42.47 1.94
4913 5448 1.994779 CTGGCAATGGCGATGTTTTTC 59.005 47.619 1.51 0.00 42.47 2.29
4914 5449 1.342496 TGGCAATGGCGATGTTTTTCA 59.658 42.857 1.51 0.00 42.47 2.69
4915 5450 1.726248 GGCAATGGCGATGTTTTTCAC 59.274 47.619 0.00 0.00 42.47 3.18
4916 5451 2.402305 GCAATGGCGATGTTTTTCACA 58.598 42.857 0.00 0.00 40.71 3.58
4917 5452 4.168779 GGCAATGGCGATGTTTTTCACAT 61.169 43.478 0.00 0.00 42.40 3.21
4928 5463 5.821516 TGTTTTTCACATCGTTACCTTGT 57.178 34.783 0.00 0.00 0.00 3.16
4929 5464 6.197364 TGTTTTTCACATCGTTACCTTGTT 57.803 33.333 0.00 0.00 0.00 2.83
4930 5465 6.030849 TGTTTTTCACATCGTTACCTTGTTG 58.969 36.000 0.00 0.00 0.00 3.33
4931 5466 4.822036 TTTCACATCGTTACCTTGTTGG 57.178 40.909 0.00 0.00 42.93 3.77
4932 5467 3.755112 TCACATCGTTACCTTGTTGGA 57.245 42.857 0.00 0.00 39.71 3.53
4933 5468 3.659786 TCACATCGTTACCTTGTTGGAG 58.340 45.455 0.00 0.00 39.71 3.86
4934 5469 2.742053 CACATCGTTACCTTGTTGGAGG 59.258 50.000 0.00 0.00 42.75 4.30
4935 5470 1.737793 CATCGTTACCTTGTTGGAGGC 59.262 52.381 0.00 0.00 40.65 4.70
4936 5471 0.759959 TCGTTACCTTGTTGGAGGCA 59.240 50.000 0.00 0.00 40.65 4.75
4937 5472 1.349688 TCGTTACCTTGTTGGAGGCAT 59.650 47.619 0.00 0.00 40.65 4.40
4938 5473 2.159382 CGTTACCTTGTTGGAGGCATT 58.841 47.619 0.00 0.00 40.65 3.56
4939 5474 2.095263 CGTTACCTTGTTGGAGGCATTG 60.095 50.000 0.00 0.00 40.65 2.82
4940 5475 1.544724 TACCTTGTTGGAGGCATTGC 58.455 50.000 0.00 0.00 40.65 3.56
4941 5476 0.178953 ACCTTGTTGGAGGCATTGCT 60.179 50.000 8.82 0.00 40.65 3.91
4942 5477 0.529378 CCTTGTTGGAGGCATTGCTC 59.471 55.000 8.82 4.27 38.35 4.26
4943 5478 0.169672 CTTGTTGGAGGCATTGCTCG 59.830 55.000 8.82 0.00 0.00 5.03
4944 5479 1.243342 TTGTTGGAGGCATTGCTCGG 61.243 55.000 8.82 0.00 0.00 4.63
4945 5480 1.377202 GTTGGAGGCATTGCTCGGA 60.377 57.895 8.82 0.00 0.00 4.55
4946 5481 0.749454 GTTGGAGGCATTGCTCGGAT 60.749 55.000 8.82 0.00 0.00 4.18
4947 5482 0.836606 TTGGAGGCATTGCTCGGATA 59.163 50.000 8.82 0.00 0.00 2.59
4948 5483 1.059098 TGGAGGCATTGCTCGGATAT 58.941 50.000 8.82 0.00 0.00 1.63
4949 5484 1.271001 TGGAGGCATTGCTCGGATATG 60.271 52.381 8.82 0.00 0.00 1.78
4950 5485 1.271054 GGAGGCATTGCTCGGATATGT 60.271 52.381 8.82 0.00 0.00 2.29
4951 5486 2.498167 GAGGCATTGCTCGGATATGTT 58.502 47.619 8.82 0.00 0.00 2.71
4952 5487 2.880890 GAGGCATTGCTCGGATATGTTT 59.119 45.455 8.82 0.00 0.00 2.83
4953 5488 2.620115 AGGCATTGCTCGGATATGTTTG 59.380 45.455 8.82 0.00 0.00 2.93
4954 5489 2.287788 GGCATTGCTCGGATATGTTTGG 60.288 50.000 8.82 0.00 0.00 3.28
4955 5490 2.618241 GCATTGCTCGGATATGTTTGGA 59.382 45.455 0.16 0.00 0.00 3.53
4956 5491 3.548818 GCATTGCTCGGATATGTTTGGAC 60.549 47.826 0.16 0.00 0.00 4.02
4957 5492 3.627395 TTGCTCGGATATGTTTGGACT 57.373 42.857 0.00 0.00 0.00 3.85
4958 5493 2.905075 TGCTCGGATATGTTTGGACTG 58.095 47.619 0.00 0.00 0.00 3.51
4959 5494 2.499693 TGCTCGGATATGTTTGGACTGA 59.500 45.455 0.00 0.00 0.00 3.41
4960 5495 3.134623 TGCTCGGATATGTTTGGACTGAT 59.865 43.478 0.00 0.00 0.00 2.90
4961 5496 4.130118 GCTCGGATATGTTTGGACTGATT 58.870 43.478 0.00 0.00 0.00 2.57
4962 5497 4.212214 GCTCGGATATGTTTGGACTGATTC 59.788 45.833 0.00 0.00 0.00 2.52
4963 5498 5.605534 CTCGGATATGTTTGGACTGATTCT 58.394 41.667 0.00 0.00 0.00 2.40
4964 5499 5.989477 TCGGATATGTTTGGACTGATTCTT 58.011 37.500 0.00 0.00 0.00 2.52
4965 5500 6.049149 TCGGATATGTTTGGACTGATTCTTC 58.951 40.000 0.00 0.00 0.00 2.87
4966 5501 5.817296 CGGATATGTTTGGACTGATTCTTCA 59.183 40.000 0.00 0.00 0.00 3.02
4979 5514 6.396829 CTGATTCTTCAGGGTGAAAACTTT 57.603 37.500 0.00 0.00 44.78 2.66
4980 5515 6.147864 TGATTCTTCAGGGTGAAAACTTTG 57.852 37.500 0.00 0.00 35.73 2.77
4981 5516 5.890985 TGATTCTTCAGGGTGAAAACTTTGA 59.109 36.000 0.00 0.00 35.73 2.69
4982 5517 6.550854 TGATTCTTCAGGGTGAAAACTTTGAT 59.449 34.615 0.00 0.00 35.73 2.57
4983 5518 7.723616 TGATTCTTCAGGGTGAAAACTTTGATA 59.276 33.333 0.00 0.00 35.73 2.15
4984 5519 6.877611 TCTTCAGGGTGAAAACTTTGATAC 57.122 37.500 0.00 0.00 35.73 2.24
4985 5520 5.768164 TCTTCAGGGTGAAAACTTTGATACC 59.232 40.000 0.00 0.00 35.73 2.73
4986 5521 4.069304 TCAGGGTGAAAACTTTGATACCG 58.931 43.478 0.00 0.00 0.00 4.02
4987 5522 3.190535 CAGGGTGAAAACTTTGATACCGG 59.809 47.826 0.00 0.00 0.00 5.28
4988 5523 2.094906 GGGTGAAAACTTTGATACCGGC 60.095 50.000 0.00 0.00 0.00 6.13
4989 5524 2.094906 GGTGAAAACTTTGATACCGGCC 60.095 50.000 0.00 0.00 0.00 6.13
4990 5525 2.817844 GTGAAAACTTTGATACCGGCCT 59.182 45.455 0.00 0.00 0.00 5.19
4991 5526 3.254903 GTGAAAACTTTGATACCGGCCTT 59.745 43.478 0.00 0.00 0.00 4.35
4992 5527 3.892588 TGAAAACTTTGATACCGGCCTTT 59.107 39.130 0.00 0.00 0.00 3.11
4993 5528 3.934457 AAACTTTGATACCGGCCTTTG 57.066 42.857 0.00 0.00 0.00 2.77
4994 5529 2.579410 ACTTTGATACCGGCCTTTGT 57.421 45.000 0.00 0.00 0.00 2.83
4995 5530 2.159382 ACTTTGATACCGGCCTTTGTG 58.841 47.619 0.00 0.00 0.00 3.33
4996 5531 1.472480 CTTTGATACCGGCCTTTGTGG 59.528 52.381 0.00 0.00 39.35 4.17
4997 5532 0.402504 TTGATACCGGCCTTTGTGGT 59.597 50.000 0.00 2.22 39.80 4.16
4998 5533 0.402504 TGATACCGGCCTTTGTGGTT 59.597 50.000 0.00 0.00 37.20 3.67
4999 5534 0.808755 GATACCGGCCTTTGTGGTTG 59.191 55.000 0.00 0.00 37.20 3.77
5000 5535 0.610785 ATACCGGCCTTTGTGGTTGG 60.611 55.000 0.00 0.00 37.20 3.77
5001 5536 1.997256 TACCGGCCTTTGTGGTTGGT 61.997 55.000 0.00 1.50 44.08 3.67
5002 5537 2.131067 CCGGCCTTTGTGGTTGGTT 61.131 57.895 0.00 0.00 38.35 3.67
5003 5538 1.362355 CGGCCTTTGTGGTTGGTTC 59.638 57.895 0.00 0.00 38.35 3.62
5004 5539 1.745890 GGCCTTTGTGGTTGGTTCC 59.254 57.895 0.00 0.00 38.35 3.62
5005 5540 1.745890 GCCTTTGTGGTTGGTTCCC 59.254 57.895 0.00 0.00 38.35 3.97
5006 5541 2.037871 CCTTTGTGGTTGGTTCCCG 58.962 57.895 0.00 0.00 0.00 5.14
5007 5542 0.753848 CCTTTGTGGTTGGTTCCCGT 60.754 55.000 0.00 0.00 0.00 5.28
5008 5543 0.383949 CTTTGTGGTTGGTTCCCGTG 59.616 55.000 0.00 0.00 0.00 4.94
5009 5544 0.034380 TTTGTGGTTGGTTCCCGTGA 60.034 50.000 0.00 0.00 0.00 4.35
5010 5545 0.748729 TTGTGGTTGGTTCCCGTGAC 60.749 55.000 0.00 0.00 0.00 3.67
5011 5546 2.109387 TGGTTGGTTCCCGTGACG 59.891 61.111 0.00 0.00 0.00 4.35
5013 5548 3.351416 GTTGGTTCCCGTGACGGC 61.351 66.667 20.39 5.35 46.86 5.68
5014 5549 4.973055 TTGGTTCCCGTGACGGCG 62.973 66.667 20.39 12.35 46.86 6.46
5023 5558 3.470567 GTGACGGCGTCGCTTGAG 61.471 66.667 37.76 8.87 39.62 3.02
5024 5559 3.973516 TGACGGCGTCGCTTGAGT 61.974 61.111 31.90 12.00 40.63 3.41
5025 5560 3.470567 GACGGCGTCGCTTGAGTG 61.471 66.667 25.42 3.17 40.63 3.51
5026 5561 4.280494 ACGGCGTCGCTTGAGTGT 62.280 61.111 18.11 3.79 40.63 3.55
5027 5562 3.470567 CGGCGTCGCTTGAGTGTC 61.471 66.667 18.11 0.00 0.00 3.67
5028 5563 3.470567 GGCGTCGCTTGAGTGTCG 61.471 66.667 18.11 6.80 39.37 4.35
5030 5565 2.429236 CGTCGCTTGAGTGTCGCT 60.429 61.111 0.00 0.00 31.54 4.93
5031 5566 2.016704 CGTCGCTTGAGTGTCGCTT 61.017 57.895 0.00 0.00 31.54 4.68
5032 5567 1.775962 GTCGCTTGAGTGTCGCTTC 59.224 57.895 0.00 0.00 0.00 3.86
5033 5568 1.372997 TCGCTTGAGTGTCGCTTCC 60.373 57.895 0.00 0.00 0.00 3.46
5034 5569 1.373497 CGCTTGAGTGTCGCTTCCT 60.373 57.895 0.00 0.00 0.00 3.36
5035 5570 0.946221 CGCTTGAGTGTCGCTTCCTT 60.946 55.000 0.00 0.00 0.00 3.36
5036 5571 0.793250 GCTTGAGTGTCGCTTCCTTC 59.207 55.000 0.00 0.00 0.00 3.46
5037 5572 1.606737 GCTTGAGTGTCGCTTCCTTCT 60.607 52.381 0.00 0.00 0.00 2.85
5038 5573 2.760374 CTTGAGTGTCGCTTCCTTCTT 58.240 47.619 0.00 0.00 0.00 2.52
5039 5574 2.154854 TGAGTGTCGCTTCCTTCTTG 57.845 50.000 0.00 0.00 0.00 3.02
5040 5575 1.686587 TGAGTGTCGCTTCCTTCTTGA 59.313 47.619 0.00 0.00 0.00 3.02
5041 5576 2.102420 TGAGTGTCGCTTCCTTCTTGAA 59.898 45.455 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.672295 GAGAGTGAAGGGGCTGCCG 62.672 68.421 13.40 0.00 0.00 5.69
32 33 7.144000 GGTATAGACTAAACAAGATACCGGTG 58.856 42.308 19.93 1.54 32.02 4.94
56 57 2.892852 TGGCTTTTCAGATGTCAAAGGG 59.107 45.455 8.40 0.00 0.00 3.95
86 87 1.673808 GGGCTCCGGTGGTACTACAG 61.674 65.000 11.80 7.12 0.00 2.74
109 110 3.299977 GGGGGCCGTGGTTGTTTC 61.300 66.667 0.00 0.00 0.00 2.78
128 130 3.679917 GCGACTGGAAGAAGATCATGGAA 60.680 47.826 0.00 0.00 37.43 3.53
141 143 1.277842 TCATTGCTTAGGCGACTGGAA 59.722 47.619 0.00 0.00 43.88 3.53
347 372 3.554342 CATGGGCGGGAGGAGGAG 61.554 72.222 0.00 0.00 0.00 3.69
359 384 1.386525 CGGGGATGAAGTTGCATGGG 61.387 60.000 0.00 0.00 0.00 4.00
437 465 1.221840 GCGGAATCAGGCAGAGGAA 59.778 57.895 0.00 0.00 0.00 3.36
475 503 2.294263 ACTAGGGGGAAGGATAGGCAAA 60.294 50.000 0.00 0.00 0.00 3.68
504 532 3.541713 GCCGAGGGGGAGTGCTAG 61.542 72.222 0.00 0.00 38.47 3.42
520 554 1.569479 GCCAAGTGGTTCAGAGACGC 61.569 60.000 0.00 0.00 37.57 5.19
522 556 0.951040 CGGCCAAGTGGTTCAGAGAC 60.951 60.000 2.24 0.00 37.57 3.36
523 557 1.118965 TCGGCCAAGTGGTTCAGAGA 61.119 55.000 2.24 0.00 37.57 3.10
525 559 1.371183 CTCGGCCAAGTGGTTCAGA 59.629 57.895 2.24 0.00 37.57 3.27
602 640 1.766143 GCATGGCGGATCTGACGAAC 61.766 60.000 5.48 0.00 0.00 3.95
603 641 1.521457 GCATGGCGGATCTGACGAA 60.521 57.895 5.48 0.00 0.00 3.85
609 647 4.471908 TGCGTGCATGGCGGATCT 62.472 61.111 8.27 0.00 0.00 2.75
649 687 3.014085 TTGGCCGTCGGTGAGATCC 62.014 63.158 13.94 4.72 0.00 3.36
755 801 1.211212 GCTGTATTCCCGGGGTTAGTT 59.789 52.381 23.50 1.68 0.00 2.24
756 802 0.835276 GCTGTATTCCCGGGGTTAGT 59.165 55.000 23.50 0.00 0.00 2.24
757 803 0.108019 GGCTGTATTCCCGGGGTTAG 59.892 60.000 23.50 13.21 0.00 2.34
758 804 0.620990 TGGCTGTATTCCCGGGGTTA 60.621 55.000 23.50 10.11 0.00 2.85
759 805 1.286305 ATGGCTGTATTCCCGGGGTT 61.286 55.000 23.50 11.27 0.00 4.11
760 806 0.400815 TATGGCTGTATTCCCGGGGT 60.401 55.000 23.50 12.90 0.00 4.95
761 807 0.324943 CTATGGCTGTATTCCCGGGG 59.675 60.000 23.50 6.77 0.00 5.73
762 808 0.324943 CCTATGGCTGTATTCCCGGG 59.675 60.000 16.85 16.85 0.00 5.73
763 809 0.324943 CCCTATGGCTGTATTCCCGG 59.675 60.000 0.00 0.00 0.00 5.73
764 810 0.324943 CCCCTATGGCTGTATTCCCG 59.675 60.000 0.00 0.00 0.00 5.14
765 811 1.742308 TCCCCTATGGCTGTATTCCC 58.258 55.000 0.00 0.00 0.00 3.97
766 812 3.876309 TTTCCCCTATGGCTGTATTCC 57.124 47.619 0.00 0.00 0.00 3.01
785 831 1.228769 GGGGAAGGGCGGAGTTTTT 60.229 57.895 0.00 0.00 0.00 1.94
786 832 2.439245 GGGGAAGGGCGGAGTTTT 59.561 61.111 0.00 0.00 0.00 2.43
787 833 3.658422 GGGGGAAGGGCGGAGTTT 61.658 66.667 0.00 0.00 0.00 2.66
801 847 0.915364 AGAGAAAGCTAGCAAGGGGG 59.085 55.000 18.83 0.00 0.00 5.40
802 848 3.034635 TCTAGAGAAAGCTAGCAAGGGG 58.965 50.000 18.83 0.00 38.17 4.79
803 849 4.744795 TTCTAGAGAAAGCTAGCAAGGG 57.255 45.455 18.83 0.00 38.17 3.95
822 868 2.720891 CGGTAAAGCTCGCGAGTTTTTC 60.721 50.000 41.83 36.68 41.17 2.29
827 873 1.154073 GACGGTAAAGCTCGCGAGT 60.154 57.895 34.46 19.41 0.00 4.18
1028 1074 2.609610 CCCCTTCCCCCTTCGTCA 60.610 66.667 0.00 0.00 0.00 4.35
1051 1097 3.791539 GAGCATCGTCAGCACCAG 58.208 61.111 0.00 0.00 0.00 4.00
1154 1203 3.521308 GAAGCGTGCGTGTGGGTTG 62.521 63.158 0.00 0.00 0.00 3.77
1623 1689 9.698617 GAATACATGATAAACCGTCTACAAAAC 57.301 33.333 0.00 0.00 0.00 2.43
1674 1740 5.302360 TCTCCTATTGTACACAAACACACC 58.698 41.667 0.00 0.00 39.55 4.16
1800 1866 1.811965 TGCACCAGGAACATTTCGATG 59.188 47.619 0.00 0.00 0.00 3.84
1837 1903 1.339631 TGCACGGGGAGGTCAAAATAG 60.340 52.381 0.00 0.00 0.00 1.73
1953 2058 5.981088 TGACTACAAAGGGTGAATACGTA 57.019 39.130 0.00 0.00 0.00 3.57
1954 2059 4.877378 TGACTACAAAGGGTGAATACGT 57.123 40.909 0.00 0.00 0.00 3.57
1955 2060 4.570772 CCATGACTACAAAGGGTGAATACG 59.429 45.833 0.00 0.00 0.00 3.06
2067 2254 2.724403 GCATGTGCAAACGCCTAAC 58.276 52.632 0.00 0.00 41.59 2.34
2197 2386 6.314400 CAGCAGCATAAATACAAAAAGGCAAT 59.686 34.615 0.00 0.00 0.00 3.56
2313 2502 2.482296 AAACAGCAGCAGCCGCATTC 62.482 55.000 2.79 0.00 43.56 2.67
2454 2830 1.003839 GTTCACAGATCCCCGTGCA 60.004 57.895 3.28 0.00 33.03 4.57
2692 3074 6.655425 ACCAGGAGTAGAAAAGTAAAGCATTC 59.345 38.462 0.00 0.00 0.00 2.67
2710 3092 7.383687 TCAATAAACTAACAGTGTACCAGGAG 58.616 38.462 0.00 0.00 0.00 3.69
2941 3432 5.763698 ACATGAATTGGTAGATGAGCATGAG 59.236 40.000 0.00 0.00 36.36 2.90
3107 3599 5.708948 TGTTATACTGACCATTGCAAAAGC 58.291 37.500 1.71 0.00 0.00 3.51
3108 3600 7.023575 GTCTGTTATACTGACCATTGCAAAAG 58.976 38.462 1.71 0.00 40.01 2.27
3165 3657 2.101249 TCATCTCGACATACATGCTGCA 59.899 45.455 4.13 4.13 0.00 4.41
3351 3843 9.866655 ATATGGACCTCTAATTTTGCTTTATCA 57.133 29.630 0.00 0.00 0.00 2.15
3466 3961 8.522830 ACTAAATCATACTGTGAACAATTTGGG 58.477 33.333 0.78 1.51 40.97 4.12
3610 4112 3.005367 CCGCATTTGGAACTAAAACCACT 59.995 43.478 0.00 0.00 35.81 4.00
3870 4372 3.443037 GGTCACTGAGATGATGTTCTCG 58.557 50.000 0.00 0.00 44.22 4.04
3900 4402 1.300931 GACACTGAAGCCGCTGTCA 60.301 57.895 0.00 0.00 34.38 3.58
4007 4509 4.338815 CCCTGAGGTAGTCGAGCA 57.661 61.111 0.00 0.00 0.00 4.26
4056 4558 2.492088 TCTGGGTTCACTATGTCTGTCG 59.508 50.000 0.00 0.00 0.00 4.35
4076 4578 0.391793 GGCTGGTTACCTCACTGCTC 60.392 60.000 2.07 0.00 0.00 4.26
4107 4609 6.744537 CGCAACTAAATTTCCTCTTCATCTTG 59.255 38.462 0.00 0.00 0.00 3.02
4189 4693 5.123344 ACTTAACATTAACCGAAGCATCCAC 59.877 40.000 0.00 0.00 0.00 4.02
4227 4736 5.046591 GCCATAGCCCATACAGACATAGTAA 60.047 44.000 0.00 0.00 0.00 2.24
4246 4774 6.757173 ACTGGTTAGTGGTAATATGCCATA 57.243 37.500 3.01 0.00 38.40 2.74
4318 4850 1.340889 ACCACATCATGCAACCAACAC 59.659 47.619 0.00 0.00 0.00 3.32
4407 4941 4.338964 TGCTTATTTGTATGGCTCCACATG 59.661 41.667 0.00 0.00 32.39 3.21
4414 4948 6.265422 GGGAGTATTTGCTTATTTGTATGGCT 59.735 38.462 0.00 0.00 0.00 4.75
4434 4968 5.961897 TCTATATTTAGGAACGGAGGGAGT 58.038 41.667 0.00 0.00 0.00 3.85
4435 4969 7.483580 AATCTATATTTAGGAACGGAGGGAG 57.516 40.000 0.00 0.00 0.00 4.30
4436 4970 7.511371 TGAAATCTATATTTAGGAACGGAGGGA 59.489 37.037 0.00 0.00 35.41 4.20
4437 4971 7.676947 TGAAATCTATATTTAGGAACGGAGGG 58.323 38.462 0.00 0.00 35.41 4.30
4438 4972 8.989980 GTTGAAATCTATATTTAGGAACGGAGG 58.010 37.037 0.00 0.00 35.41 4.30
4439 4973 9.542462 TGTTGAAATCTATATTTAGGAACGGAG 57.458 33.333 0.00 0.00 35.41 4.63
4440 4974 9.893634 TTGTTGAAATCTATATTTAGGAACGGA 57.106 29.630 0.00 0.00 35.41 4.69
4453 4987 9.745880 CCGTATGTAGTACTTGTTGAAATCTAT 57.254 33.333 0.00 0.00 0.00 1.98
4454 4988 8.959548 TCCGTATGTAGTACTTGTTGAAATCTA 58.040 33.333 0.00 0.00 0.00 1.98
4455 4989 7.833786 TCCGTATGTAGTACTTGTTGAAATCT 58.166 34.615 0.00 0.00 0.00 2.40
4456 4990 7.254017 GCTCCGTATGTAGTACTTGTTGAAATC 60.254 40.741 0.00 0.00 0.00 2.17
4457 4991 6.534079 GCTCCGTATGTAGTACTTGTTGAAAT 59.466 38.462 0.00 0.00 0.00 2.17
4458 4992 5.865552 GCTCCGTATGTAGTACTTGTTGAAA 59.134 40.000 0.00 0.00 0.00 2.69
4459 4993 5.047872 TGCTCCGTATGTAGTACTTGTTGAA 60.048 40.000 0.00 0.00 0.00 2.69
4460 4994 4.460034 TGCTCCGTATGTAGTACTTGTTGA 59.540 41.667 0.00 0.00 0.00 3.18
4461 4995 4.740268 TGCTCCGTATGTAGTACTTGTTG 58.260 43.478 0.00 0.00 0.00 3.33
4462 4996 5.395682 TTGCTCCGTATGTAGTACTTGTT 57.604 39.130 0.00 0.00 0.00 2.83
4463 4997 5.395682 TTTGCTCCGTATGTAGTACTTGT 57.604 39.130 0.00 0.00 0.00 3.16
4464 4998 6.533723 TCATTTTGCTCCGTATGTAGTACTTG 59.466 38.462 0.00 0.00 0.00 3.16
4465 4999 6.636705 TCATTTTGCTCCGTATGTAGTACTT 58.363 36.000 0.00 0.00 0.00 2.24
4466 5000 6.127423 ACTCATTTTGCTCCGTATGTAGTACT 60.127 38.462 0.00 0.00 0.00 2.73
4467 5001 6.040878 ACTCATTTTGCTCCGTATGTAGTAC 58.959 40.000 0.00 0.00 0.00 2.73
4468 5002 6.216801 ACTCATTTTGCTCCGTATGTAGTA 57.783 37.500 0.00 0.00 0.00 1.82
4469 5003 5.086104 ACTCATTTTGCTCCGTATGTAGT 57.914 39.130 0.00 0.00 0.00 2.73
4470 5004 7.534085 TTAACTCATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
4471 5005 9.772973 ATATTAACTCATTTTGCTCCGTATGTA 57.227 29.630 0.00 0.00 0.00 2.29
4472 5006 8.677148 ATATTAACTCATTTTGCTCCGTATGT 57.323 30.769 0.00 0.00 0.00 2.29
4474 5008 9.772973 TGTATATTAACTCATTTTGCTCCGTAT 57.227 29.630 0.00 0.00 0.00 3.06
4475 5009 9.037737 GTGTATATTAACTCATTTTGCTCCGTA 57.962 33.333 0.00 0.00 0.00 4.02
4476 5010 7.769044 AGTGTATATTAACTCATTTTGCTCCGT 59.231 33.333 0.00 0.00 0.00 4.69
4477 5011 8.142994 AGTGTATATTAACTCATTTTGCTCCG 57.857 34.615 0.00 0.00 0.00 4.63
4499 5033 9.988350 GGATGTATGTAGACATGTTTTAAAGTG 57.012 33.333 0.00 0.00 40.18 3.16
4500 5034 8.879759 CGGATGTATGTAGACATGTTTTAAAGT 58.120 33.333 0.00 0.00 40.18 2.66
4501 5035 8.879759 ACGGATGTATGTAGACATGTTTTAAAG 58.120 33.333 0.00 0.00 40.18 1.85
4502 5036 8.780846 ACGGATGTATGTAGACATGTTTTAAA 57.219 30.769 0.00 0.00 40.18 1.52
4518 5052 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
4519 5053 6.474140 AATGAACTACCACATACGGATGTA 57.526 37.500 14.23 0.00 44.82 2.29
4521 5055 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
4522 5056 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
4523 5057 5.408880 TCAAATGAACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4524 5058 6.489127 TTTCAAATGAACTACCACATACGG 57.511 37.500 0.00 0.00 33.13 4.02
4525 5059 6.468956 GCATTTCAAATGAACTACCACATACG 59.531 38.462 14.65 0.00 33.13 3.06
4526 5060 7.538575 AGCATTTCAAATGAACTACCACATAC 58.461 34.615 14.65 0.00 33.13 2.39
4527 5061 7.701539 AGCATTTCAAATGAACTACCACATA 57.298 32.000 14.65 0.00 33.13 2.29
4528 5062 6.594788 AGCATTTCAAATGAACTACCACAT 57.405 33.333 14.65 0.00 33.13 3.21
4529 5063 6.939730 TCTAGCATTTCAAATGAACTACCACA 59.060 34.615 14.65 0.00 33.13 4.17
4530 5064 7.377766 TCTAGCATTTCAAATGAACTACCAC 57.622 36.000 14.65 0.00 33.13 4.16
4531 5065 7.994425 TTCTAGCATTTCAAATGAACTACCA 57.006 32.000 14.65 0.00 33.13 3.25
4532 5066 8.730680 TCTTTCTAGCATTTCAAATGAACTACC 58.269 33.333 14.65 0.00 33.13 3.18
4533 5067 9.548208 GTCTTTCTAGCATTTCAAATGAACTAC 57.452 33.333 14.65 0.00 33.13 2.73
4534 5068 9.283768 TGTCTTTCTAGCATTTCAAATGAACTA 57.716 29.630 14.65 5.89 33.13 2.24
4535 5069 8.169977 TGTCTTTCTAGCATTTCAAATGAACT 57.830 30.769 14.65 5.01 33.13 3.01
4536 5070 8.801715 TTGTCTTTCTAGCATTTCAAATGAAC 57.198 30.769 14.65 0.00 33.13 3.18
4537 5071 9.985730 ATTTGTCTTTCTAGCATTTCAAATGAA 57.014 25.926 14.65 0.07 34.47 2.57
4548 5082 8.879759 CGTTCCTAAATATTTGTCTTTCTAGCA 58.120 33.333 11.05 0.00 0.00 3.49
4549 5083 8.336080 CCGTTCCTAAATATTTGTCTTTCTAGC 58.664 37.037 11.05 0.00 0.00 3.42
4550 5084 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4551 5085 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4552 5086 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4553 5087 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4554 5088 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4555 5089 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4556 5090 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4557 5091 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4558 5092 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4559 5093 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4560 5094 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4561 5095 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
4562 5096 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
4563 5097 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
4564 5098 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
4565 5099 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
4566 5100 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
4567 5101 3.393426 AATGTACTCCCTCCGTTCCTA 57.607 47.619 0.00 0.00 0.00 2.94
4568 5102 2.249309 AATGTACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
4569 5103 2.500504 AGAAATGTACTCCCTCCGTTCC 59.499 50.000 0.00 0.00 0.00 3.62
4570 5104 3.889520 AGAAATGTACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
4571 5105 3.450096 GGTAGAAATGTACTCCCTCCGTT 59.550 47.826 0.00 0.00 0.00 4.44
4572 5106 3.029570 GGTAGAAATGTACTCCCTCCGT 58.970 50.000 0.00 0.00 0.00 4.69
4573 5107 2.364647 GGGTAGAAATGTACTCCCTCCG 59.635 54.545 0.00 0.00 32.89 4.63
4574 5108 2.364647 CGGGTAGAAATGTACTCCCTCC 59.635 54.545 0.00 0.00 33.41 4.30
4575 5109 2.223994 GCGGGTAGAAATGTACTCCCTC 60.224 54.545 0.00 0.00 33.41 4.30
4576 5110 1.761198 GCGGGTAGAAATGTACTCCCT 59.239 52.381 0.00 0.00 33.41 4.20
4577 5111 1.483415 TGCGGGTAGAAATGTACTCCC 59.517 52.381 0.00 0.00 0.00 4.30
4578 5112 2.973694 TGCGGGTAGAAATGTACTCC 57.026 50.000 0.00 0.00 0.00 3.85
4579 5113 2.544267 GCATGCGGGTAGAAATGTACTC 59.456 50.000 0.00 0.00 0.00 2.59
4580 5114 2.561569 GCATGCGGGTAGAAATGTACT 58.438 47.619 0.00 0.00 0.00 2.73
4581 5115 1.260561 CGCATGCGGGTAGAAATGTAC 59.739 52.381 31.99 0.00 35.56 2.90
4582 5116 1.137282 TCGCATGCGGGTAGAAATGTA 59.863 47.619 37.18 12.85 40.25 2.29
4583 5117 0.107897 TCGCATGCGGGTAGAAATGT 60.108 50.000 37.18 0.00 40.25 2.71
4595 5129 7.220683 ACATTTGTTTATTATGTCTTCGCATGC 59.779 33.333 7.91 7.91 0.00 4.06
4635 5170 4.141367 TGTTTACTTGGAATGGGTCTCACA 60.141 41.667 0.00 0.00 0.00 3.58
4667 5202 9.875708 AGAGTATTATTCTCACATTAGAGGAGT 57.124 33.333 1.91 0.00 36.30 3.85
4701 5236 7.395645 CGTGTACTTGCATTAATAATTCGTGA 58.604 34.615 0.00 0.00 0.00 4.35
4704 5239 5.619607 GCCGTGTACTTGCATTAATAATTCG 59.380 40.000 0.00 0.00 0.00 3.34
4720 5255 1.873698 TTTGAGTTGGAGCCGTGTAC 58.126 50.000 0.00 0.00 0.00 2.90
4725 5260 1.135972 CGTGATTTTGAGTTGGAGCCG 60.136 52.381 0.00 0.00 0.00 5.52
4741 5276 5.404366 CGAGAAACTAAAATCAAGACCGTGA 59.596 40.000 0.00 0.00 0.00 4.35
4746 5281 4.695928 AGCCCGAGAAACTAAAATCAAGAC 59.304 41.667 0.00 0.00 0.00 3.01
4772 5307 8.519526 TGCTATGTATAAAACCAAAAGAACTGG 58.480 33.333 0.00 0.00 40.05 4.00
4775 5310 9.685828 TTGTGCTATGTATAAAACCAAAAGAAC 57.314 29.630 0.00 0.00 0.00 3.01
4804 5339 6.460537 CCACCATCCAAATCTCATATGTGTTG 60.461 42.308 1.90 2.37 0.00 3.33
4805 5340 5.595542 CCACCATCCAAATCTCATATGTGTT 59.404 40.000 1.90 0.00 0.00 3.32
4806 5341 5.135383 CCACCATCCAAATCTCATATGTGT 58.865 41.667 1.90 0.00 0.00 3.72
4807 5342 5.009310 CACCACCATCCAAATCTCATATGTG 59.991 44.000 1.90 0.00 0.00 3.21
4808 5343 5.135383 CACCACCATCCAAATCTCATATGT 58.865 41.667 1.90 0.00 0.00 2.29
4809 5344 4.022589 GCACCACCATCCAAATCTCATATG 60.023 45.833 0.00 0.00 0.00 1.78
4810 5345 4.141088 AGCACCACCATCCAAATCTCATAT 60.141 41.667 0.00 0.00 0.00 1.78
4811 5346 3.202818 AGCACCACCATCCAAATCTCATA 59.797 43.478 0.00 0.00 0.00 2.15
4812 5347 2.024655 AGCACCACCATCCAAATCTCAT 60.025 45.455 0.00 0.00 0.00 2.90
4813 5348 1.355381 AGCACCACCATCCAAATCTCA 59.645 47.619 0.00 0.00 0.00 3.27
4814 5349 2.134789 AGCACCACCATCCAAATCTC 57.865 50.000 0.00 0.00 0.00 2.75
4815 5350 3.053395 ACATAGCACCACCATCCAAATCT 60.053 43.478 0.00 0.00 0.00 2.40
4816 5351 3.067180 CACATAGCACCACCATCCAAATC 59.933 47.826 0.00 0.00 0.00 2.17
4817 5352 3.025978 CACATAGCACCACCATCCAAAT 58.974 45.455 0.00 0.00 0.00 2.32
4818 5353 2.445427 CACATAGCACCACCATCCAAA 58.555 47.619 0.00 0.00 0.00 3.28
4819 5354 1.954733 GCACATAGCACCACCATCCAA 60.955 52.381 0.00 0.00 44.79 3.53
4820 5355 0.394216 GCACATAGCACCACCATCCA 60.394 55.000 0.00 0.00 44.79 3.41
4821 5356 2.408333 GCACATAGCACCACCATCC 58.592 57.895 0.00 0.00 44.79 3.51
4831 5366 0.807667 CGAGACTGGGTGCACATAGC 60.808 60.000 20.43 11.45 45.96 2.97
4832 5367 0.817654 TCGAGACTGGGTGCACATAG 59.182 55.000 20.43 17.57 0.00 2.23
4833 5368 1.067142 GTTCGAGACTGGGTGCACATA 60.067 52.381 20.43 5.59 0.00 2.29
4834 5369 0.320771 GTTCGAGACTGGGTGCACAT 60.321 55.000 20.43 0.00 0.00 3.21
4835 5370 1.069090 GTTCGAGACTGGGTGCACA 59.931 57.895 20.43 0.00 0.00 4.57
4836 5371 0.667792 GAGTTCGAGACTGGGTGCAC 60.668 60.000 8.80 8.80 39.19 4.57
4837 5372 1.666011 GAGTTCGAGACTGGGTGCA 59.334 57.895 5.20 0.00 39.19 4.57
4838 5373 1.079750 GGAGTTCGAGACTGGGTGC 60.080 63.158 5.20 0.00 39.19 5.01
4839 5374 1.213013 CGGAGTTCGAGACTGGGTG 59.787 63.158 5.20 0.00 39.19 4.61
4840 5375 1.977544 CCGGAGTTCGAGACTGGGT 60.978 63.158 0.00 0.00 39.19 4.51
4841 5376 2.711922 CCCGGAGTTCGAGACTGGG 61.712 68.421 0.73 14.82 39.19 4.45
4842 5377 1.677966 TCCCGGAGTTCGAGACTGG 60.678 63.158 0.73 5.90 39.19 4.00
4843 5378 1.507174 GTCCCGGAGTTCGAGACTG 59.493 63.158 0.73 0.00 42.27 3.51
4844 5379 2.039405 CGTCCCGGAGTTCGAGACT 61.039 63.158 0.73 0.71 43.17 3.24
4845 5380 1.580845 TTCGTCCCGGAGTTCGAGAC 61.581 60.000 0.73 0.00 42.15 3.36
4846 5381 0.890542 TTTCGTCCCGGAGTTCGAGA 60.891 55.000 0.73 0.00 42.43 4.04
4847 5382 0.456312 CTTTCGTCCCGGAGTTCGAG 60.456 60.000 0.73 0.00 42.43 4.04
4848 5383 1.582968 CTTTCGTCCCGGAGTTCGA 59.417 57.895 0.73 4.47 42.43 3.71
4849 5384 2.092882 GCTTTCGTCCCGGAGTTCG 61.093 63.158 0.73 1.74 38.88 3.95
4850 5385 1.740664 GGCTTTCGTCCCGGAGTTC 60.741 63.158 0.73 0.00 0.00 3.01
4851 5386 0.901580 TAGGCTTTCGTCCCGGAGTT 60.902 55.000 0.73 0.00 0.00 3.01
4852 5387 1.304713 TAGGCTTTCGTCCCGGAGT 60.305 57.895 0.73 0.00 0.00 3.85
4853 5388 1.437986 CTAGGCTTTCGTCCCGGAG 59.562 63.158 0.73 0.00 0.00 4.63
4854 5389 2.056223 CCTAGGCTTTCGTCCCGGA 61.056 63.158 0.73 0.00 0.00 5.14
4855 5390 2.056223 TCCTAGGCTTTCGTCCCGG 61.056 63.158 2.96 0.00 0.00 5.73
4856 5391 1.141234 GTCCTAGGCTTTCGTCCCG 59.859 63.158 2.96 0.00 0.00 5.14
4857 5392 0.175989 CTGTCCTAGGCTTTCGTCCC 59.824 60.000 2.96 0.00 0.00 4.46
4858 5393 1.135053 GTCTGTCCTAGGCTTTCGTCC 60.135 57.143 2.96 0.00 0.00 4.79
4859 5394 1.135053 GGTCTGTCCTAGGCTTTCGTC 60.135 57.143 2.96 0.00 0.00 4.20
4860 5395 0.896226 GGTCTGTCCTAGGCTTTCGT 59.104 55.000 2.96 0.00 0.00 3.85
4861 5396 0.175989 GGGTCTGTCCTAGGCTTTCG 59.824 60.000 2.96 0.00 36.25 3.46
4862 5397 0.175989 CGGGTCTGTCCTAGGCTTTC 59.824 60.000 2.96 0.00 36.25 2.62
4863 5398 0.252103 TCGGGTCTGTCCTAGGCTTT 60.252 55.000 2.96 0.00 36.25 3.51
4864 5399 0.684805 CTCGGGTCTGTCCTAGGCTT 60.685 60.000 2.96 0.00 36.25 4.35
4865 5400 1.076632 CTCGGGTCTGTCCTAGGCT 60.077 63.158 2.96 0.00 36.25 4.58
4866 5401 1.380112 ACTCGGGTCTGTCCTAGGC 60.380 63.158 2.96 0.00 36.25 3.93
4867 5402 0.034380 TCACTCGGGTCTGTCCTAGG 60.034 60.000 0.82 0.82 36.25 3.02
4868 5403 2.060050 ATCACTCGGGTCTGTCCTAG 57.940 55.000 0.00 0.00 36.25 3.02
4869 5404 2.526888 AATCACTCGGGTCTGTCCTA 57.473 50.000 0.00 0.00 36.25 2.94
4870 5405 2.526888 TAATCACTCGGGTCTGTCCT 57.473 50.000 0.00 0.00 36.25 3.85
4871 5406 3.492829 GGAATAATCACTCGGGTCTGTCC 60.493 52.174 0.00 0.00 0.00 4.02
4872 5407 3.385111 AGGAATAATCACTCGGGTCTGTC 59.615 47.826 0.00 0.00 0.00 3.51
4873 5408 3.133003 CAGGAATAATCACTCGGGTCTGT 59.867 47.826 0.00 0.00 0.00 3.41
4874 5409 3.493350 CCAGGAATAATCACTCGGGTCTG 60.493 52.174 0.00 0.00 0.00 3.51
4875 5410 2.700897 CCAGGAATAATCACTCGGGTCT 59.299 50.000 0.00 0.00 0.00 3.85
4876 5411 2.807108 GCCAGGAATAATCACTCGGGTC 60.807 54.545 0.00 0.00 0.00 4.46
4877 5412 1.141053 GCCAGGAATAATCACTCGGGT 59.859 52.381 0.00 0.00 0.00 5.28
4878 5413 1.140852 TGCCAGGAATAATCACTCGGG 59.859 52.381 0.00 0.00 0.00 5.14
4879 5414 2.620251 TGCCAGGAATAATCACTCGG 57.380 50.000 0.00 0.00 0.00 4.63
4880 5415 3.251729 CCATTGCCAGGAATAATCACTCG 59.748 47.826 0.00 0.00 0.00 4.18
4881 5416 3.005155 GCCATTGCCAGGAATAATCACTC 59.995 47.826 0.00 0.00 0.00 3.51
4882 5417 2.961062 GCCATTGCCAGGAATAATCACT 59.039 45.455 0.00 0.00 0.00 3.41
4883 5418 2.287788 CGCCATTGCCAGGAATAATCAC 60.288 50.000 0.00 0.00 0.00 3.06
4884 5419 1.955778 CGCCATTGCCAGGAATAATCA 59.044 47.619 0.00 0.00 0.00 2.57
4885 5420 2.229792 TCGCCATTGCCAGGAATAATC 58.770 47.619 0.00 0.00 0.00 1.75
4886 5421 2.363306 TCGCCATTGCCAGGAATAAT 57.637 45.000 0.00 0.00 0.00 1.28
4887 5422 1.955778 CATCGCCATTGCCAGGAATAA 59.044 47.619 0.00 0.00 0.00 1.40
4888 5423 1.133823 ACATCGCCATTGCCAGGAATA 60.134 47.619 0.00 0.00 0.00 1.75
4889 5424 0.396139 ACATCGCCATTGCCAGGAAT 60.396 50.000 0.00 0.00 0.00 3.01
4890 5425 0.611618 AACATCGCCATTGCCAGGAA 60.612 50.000 0.00 0.00 0.00 3.36
4891 5426 0.611618 AAACATCGCCATTGCCAGGA 60.612 50.000 0.00 0.00 0.00 3.86
4892 5427 0.247185 AAAACATCGCCATTGCCAGG 59.753 50.000 0.00 0.00 0.00 4.45
4893 5428 1.994779 GAAAAACATCGCCATTGCCAG 59.005 47.619 0.00 0.00 0.00 4.85
4894 5429 1.342496 TGAAAAACATCGCCATTGCCA 59.658 42.857 0.00 0.00 0.00 4.92
4895 5430 1.726248 GTGAAAAACATCGCCATTGCC 59.274 47.619 0.00 0.00 0.00 4.52
4896 5431 2.402305 TGTGAAAAACATCGCCATTGC 58.598 42.857 0.00 0.00 32.36 3.56
4897 5432 3.301379 CGATGTGAAAAACATCGCCATTG 59.699 43.478 23.03 2.19 44.51 2.82
4898 5433 3.057596 ACGATGTGAAAAACATCGCCATT 60.058 39.130 30.28 15.24 44.51 3.16
4899 5434 2.487762 ACGATGTGAAAAACATCGCCAT 59.512 40.909 30.28 15.52 44.51 4.40
4900 5435 1.876799 ACGATGTGAAAAACATCGCCA 59.123 42.857 30.28 0.00 44.51 5.69
4901 5436 2.611974 ACGATGTGAAAAACATCGCC 57.388 45.000 30.28 3.80 44.51 5.54
4902 5437 3.844099 GGTAACGATGTGAAAAACATCGC 59.156 43.478 30.28 18.91 44.51 4.58
4903 5438 5.277601 AGGTAACGATGTGAAAAACATCG 57.722 39.130 29.28 29.28 43.22 3.84
4904 5439 6.435428 ACAAGGTAACGATGTGAAAAACATC 58.565 36.000 8.15 8.15 43.22 3.06
4905 5440 6.385649 ACAAGGTAACGATGTGAAAAACAT 57.614 33.333 0.00 0.00 43.22 2.71
4906 5441 5.821516 ACAAGGTAACGATGTGAAAAACA 57.178 34.783 0.00 0.00 43.31 2.83
4907 5442 5.457473 CCAACAAGGTAACGATGTGAAAAAC 59.543 40.000 0.00 0.00 40.64 2.43
4908 5443 5.357314 TCCAACAAGGTAACGATGTGAAAAA 59.643 36.000 0.00 0.00 40.64 1.94
4909 5444 4.882427 TCCAACAAGGTAACGATGTGAAAA 59.118 37.500 0.00 0.00 40.64 2.29
4910 5445 4.452825 TCCAACAAGGTAACGATGTGAAA 58.547 39.130 0.00 0.00 40.64 2.69
4911 5446 4.062293 CTCCAACAAGGTAACGATGTGAA 58.938 43.478 0.00 0.00 40.64 3.18
4912 5447 3.556213 CCTCCAACAAGGTAACGATGTGA 60.556 47.826 0.00 0.00 40.64 3.58
4913 5448 2.742053 CCTCCAACAAGGTAACGATGTG 59.258 50.000 0.00 0.00 40.64 3.21
4914 5449 2.874457 GCCTCCAACAAGGTAACGATGT 60.874 50.000 0.00 0.00 42.23 3.06
4915 5450 1.737793 GCCTCCAACAAGGTAACGATG 59.262 52.381 0.00 0.00 46.39 3.84
4916 5451 1.349688 TGCCTCCAACAAGGTAACGAT 59.650 47.619 0.00 0.00 46.39 3.73
4917 5452 0.759959 TGCCTCCAACAAGGTAACGA 59.240 50.000 0.00 0.00 46.39 3.85
4918 5453 1.821216 ATGCCTCCAACAAGGTAACG 58.179 50.000 0.00 0.00 46.39 3.18
4919 5454 2.352715 GCAATGCCTCCAACAAGGTAAC 60.353 50.000 0.00 0.00 38.79 2.50
4920 5455 1.892474 GCAATGCCTCCAACAAGGTAA 59.108 47.619 0.00 0.00 38.79 2.85
4921 5456 1.075374 AGCAATGCCTCCAACAAGGTA 59.925 47.619 0.00 0.00 38.79 3.08
4922 5457 0.178953 AGCAATGCCTCCAACAAGGT 60.179 50.000 0.00 0.00 38.79 3.50
4923 5458 0.529378 GAGCAATGCCTCCAACAAGG 59.471 55.000 0.00 0.00 39.62 3.61
4924 5459 0.169672 CGAGCAATGCCTCCAACAAG 59.830 55.000 0.00 0.00 0.00 3.16
4925 5460 1.243342 CCGAGCAATGCCTCCAACAA 61.243 55.000 0.00 0.00 0.00 2.83
4926 5461 1.675310 CCGAGCAATGCCTCCAACA 60.675 57.895 0.00 0.00 0.00 3.33
4927 5462 0.749454 ATCCGAGCAATGCCTCCAAC 60.749 55.000 0.00 0.00 0.00 3.77
4928 5463 0.836606 TATCCGAGCAATGCCTCCAA 59.163 50.000 0.00 0.00 0.00 3.53
4929 5464 1.059098 ATATCCGAGCAATGCCTCCA 58.941 50.000 0.00 0.00 0.00 3.86
4930 5465 1.271054 ACATATCCGAGCAATGCCTCC 60.271 52.381 0.00 0.00 0.00 4.30
4931 5466 2.175878 ACATATCCGAGCAATGCCTC 57.824 50.000 0.00 0.00 0.00 4.70
4932 5467 2.620115 CAAACATATCCGAGCAATGCCT 59.380 45.455 0.00 0.00 0.00 4.75
4933 5468 2.287788 CCAAACATATCCGAGCAATGCC 60.288 50.000 0.00 0.00 0.00 4.40
4934 5469 2.618241 TCCAAACATATCCGAGCAATGC 59.382 45.455 0.00 0.00 0.00 3.56
4935 5470 3.879295 AGTCCAAACATATCCGAGCAATG 59.121 43.478 0.00 0.00 0.00 2.82
4936 5471 3.879295 CAGTCCAAACATATCCGAGCAAT 59.121 43.478 0.00 0.00 0.00 3.56
4937 5472 3.055458 TCAGTCCAAACATATCCGAGCAA 60.055 43.478 0.00 0.00 0.00 3.91
4938 5473 2.499693 TCAGTCCAAACATATCCGAGCA 59.500 45.455 0.00 0.00 0.00 4.26
4939 5474 3.179443 TCAGTCCAAACATATCCGAGC 57.821 47.619 0.00 0.00 0.00 5.03
4940 5475 5.605534 AGAATCAGTCCAAACATATCCGAG 58.394 41.667 0.00 0.00 0.00 4.63
4941 5476 5.614324 AGAATCAGTCCAAACATATCCGA 57.386 39.130 0.00 0.00 0.00 4.55
4942 5477 5.817296 TGAAGAATCAGTCCAAACATATCCG 59.183 40.000 0.00 0.00 0.00 4.18
4943 5478 7.256756 CTGAAGAATCAGTCCAAACATATCC 57.743 40.000 0.00 0.00 46.60 2.59
4957 5492 5.890985 TCAAAGTTTTCACCCTGAAGAATCA 59.109 36.000 0.00 0.00 37.70 2.57
4958 5493 6.391227 TCAAAGTTTTCACCCTGAAGAATC 57.609 37.500 0.00 0.00 37.70 2.52
4959 5494 6.983906 ATCAAAGTTTTCACCCTGAAGAAT 57.016 33.333 0.00 0.00 37.70 2.40
4960 5495 6.264518 GGTATCAAAGTTTTCACCCTGAAGAA 59.735 38.462 0.00 0.00 37.70 2.52
4961 5496 5.768164 GGTATCAAAGTTTTCACCCTGAAGA 59.232 40.000 0.00 0.00 37.70 2.87
4962 5497 5.334879 CGGTATCAAAGTTTTCACCCTGAAG 60.335 44.000 5.03 0.00 37.70 3.02
4963 5498 4.517453 CGGTATCAAAGTTTTCACCCTGAA 59.483 41.667 5.03 0.00 34.03 3.02
4964 5499 4.069304 CGGTATCAAAGTTTTCACCCTGA 58.931 43.478 5.03 0.00 0.00 3.86
4965 5500 3.190535 CCGGTATCAAAGTTTTCACCCTG 59.809 47.826 0.00 0.00 0.00 4.45
4966 5501 3.418047 CCGGTATCAAAGTTTTCACCCT 58.582 45.455 0.00 0.00 0.00 4.34
4967 5502 2.094906 GCCGGTATCAAAGTTTTCACCC 60.095 50.000 1.90 0.00 0.00 4.61
4968 5503 2.094906 GGCCGGTATCAAAGTTTTCACC 60.095 50.000 1.90 0.00 0.00 4.02
4969 5504 2.817844 AGGCCGGTATCAAAGTTTTCAC 59.182 45.455 1.90 0.00 0.00 3.18
4970 5505 3.149005 AGGCCGGTATCAAAGTTTTCA 57.851 42.857 1.90 0.00 0.00 2.69
4971 5506 4.234574 CAAAGGCCGGTATCAAAGTTTTC 58.765 43.478 1.90 0.00 0.00 2.29
4972 5507 3.639561 ACAAAGGCCGGTATCAAAGTTTT 59.360 39.130 1.90 0.00 0.00 2.43
4973 5508 3.005367 CACAAAGGCCGGTATCAAAGTTT 59.995 43.478 1.90 0.00 0.00 2.66
4974 5509 2.556622 CACAAAGGCCGGTATCAAAGTT 59.443 45.455 1.90 0.00 0.00 2.66
4975 5510 2.159382 CACAAAGGCCGGTATCAAAGT 58.841 47.619 1.90 0.00 0.00 2.66
4976 5511 1.472480 CCACAAAGGCCGGTATCAAAG 59.528 52.381 1.90 0.00 0.00 2.77
4977 5512 1.202952 ACCACAAAGGCCGGTATCAAA 60.203 47.619 1.90 0.00 43.14 2.69
4978 5513 0.402504 ACCACAAAGGCCGGTATCAA 59.597 50.000 1.90 0.00 43.14 2.57
4979 5514 0.402504 AACCACAAAGGCCGGTATCA 59.597 50.000 1.90 0.00 43.14 2.15
4980 5515 0.808755 CAACCACAAAGGCCGGTATC 59.191 55.000 1.90 0.00 43.14 2.24
4981 5516 0.610785 CCAACCACAAAGGCCGGTAT 60.611 55.000 1.90 0.00 43.14 2.73
4982 5517 1.228306 CCAACCACAAAGGCCGGTA 60.228 57.895 1.90 0.00 43.14 4.02
4983 5518 2.520741 CCAACCACAAAGGCCGGT 60.521 61.111 1.90 0.00 43.14 5.28
4984 5519 2.082629 GAACCAACCACAAAGGCCGG 62.083 60.000 0.00 0.00 43.14 6.13
4985 5520 1.362355 GAACCAACCACAAAGGCCG 59.638 57.895 0.00 0.00 43.14 6.13
4986 5521 1.745890 GGAACCAACCACAAAGGCC 59.254 57.895 0.00 0.00 43.14 5.19
5006 5541 3.470567 CTCAAGCGACGCCGTCAC 61.471 66.667 18.40 7.72 38.24 3.67
5007 5542 3.973516 ACTCAAGCGACGCCGTCA 61.974 61.111 18.40 0.00 38.24 4.35
5008 5543 3.470567 CACTCAAGCGACGCCGTC 61.471 66.667 17.79 7.29 38.24 4.79
5009 5544 4.280494 ACACTCAAGCGACGCCGT 62.280 61.111 17.79 6.03 38.24 5.68
5010 5545 3.470567 GACACTCAAGCGACGCCG 61.471 66.667 17.79 8.50 39.16 6.46
5011 5546 3.470567 CGACACTCAAGCGACGCC 61.471 66.667 17.79 0.00 0.00 5.68
5012 5547 4.122515 GCGACACTCAAGCGACGC 62.123 66.667 13.03 13.03 39.33 5.19
5013 5548 1.935065 GAAGCGACACTCAAGCGACG 61.935 60.000 0.00 0.00 35.78 5.12
5014 5549 1.618640 GGAAGCGACACTCAAGCGAC 61.619 60.000 0.00 0.00 35.78 5.19
5015 5550 1.372997 GGAAGCGACACTCAAGCGA 60.373 57.895 0.00 0.00 35.78 4.93
5016 5551 0.946221 AAGGAAGCGACACTCAAGCG 60.946 55.000 0.00 0.00 35.78 4.68
5017 5552 0.793250 GAAGGAAGCGACACTCAAGC 59.207 55.000 0.00 0.00 0.00 4.01
5018 5553 2.447244 AGAAGGAAGCGACACTCAAG 57.553 50.000 0.00 0.00 0.00 3.02
5019 5554 2.102420 TCAAGAAGGAAGCGACACTCAA 59.898 45.455 0.00 0.00 0.00 3.02
5020 5555 1.686587 TCAAGAAGGAAGCGACACTCA 59.313 47.619 0.00 0.00 0.00 3.41
5021 5556 2.440539 TCAAGAAGGAAGCGACACTC 57.559 50.000 0.00 0.00 0.00 3.51
5022 5557 2.910688 TTCAAGAAGGAAGCGACACT 57.089 45.000 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.