Multiple sequence alignment - TraesCS5B01G090800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G090800 chr5B 100.000 9563 0 0 1 9563 117905798 117896236 0.000000e+00 17660.0
1 TraesCS5B01G090800 chr5B 85.824 522 24 18 7831 8334 628595768 628595279 8.570000e-140 508.0
2 TraesCS5B01G090800 chr5B 85.632 522 25 16 7831 8334 625022556 625022067 3.990000e-138 503.0
3 TraesCS5B01G090800 chr5A 95.786 5434 161 32 1 5399 110671402 110666002 0.000000e+00 8704.0
4 TraesCS5B01G090800 chr5A 95.132 3040 103 12 6114 9151 110664991 110661995 0.000000e+00 4752.0
5 TraesCS5B01G090800 chr5A 92.460 557 41 1 5395 5951 110665968 110665413 0.000000e+00 795.0
6 TraesCS5B01G090800 chr5A 93.413 167 10 1 5950 6115 110665251 110665085 7.420000e-61 246.0
7 TraesCS5B01G090800 chr5A 78.199 211 29 8 1891 2086 364680205 364679997 1.690000e-22 119.0
8 TraesCS5B01G090800 chr5A 81.061 132 16 7 9148 9275 596570839 596570965 7.900000e-16 97.1
9 TraesCS5B01G090800 chr5A 91.803 61 5 0 9215 9275 490831386 490831446 1.710000e-12 86.1
10 TraesCS5B01G090800 chr5D 95.675 5434 170 30 1 5399 107786669 107781266 0.000000e+00 8672.0
11 TraesCS5B01G090800 chr5D 95.389 3036 90 12 6116 9151 107780428 107777443 0.000000e+00 4785.0
12 TraesCS5B01G090800 chr5D 94.337 671 36 2 5448 6118 107781193 107780525 0.000000e+00 1027.0
13 TraesCS5B01G090800 chr5D 88.601 193 16 2 9326 9512 456088243 456088435 7.470000e-56 230.0
14 TraesCS5B01G090800 chr2A 91.680 649 40 10 1261 1907 685528247 685528883 0.000000e+00 887.0
15 TraesCS5B01G090800 chr2A 92.218 257 14 3 946 1200 685527995 685528247 9.130000e-95 359.0
16 TraesCS5B01G090800 chr2A 81.022 137 20 6 1959 2093 68244201 68244333 4.720000e-18 104.0
17 TraesCS5B01G090800 chr6B 87.897 504 28 13 7831 8334 298437278 298436808 6.480000e-156 562.0
18 TraesCS5B01G090800 chr6B 80.292 137 22 5 1973 2106 695938865 695938731 2.200000e-16 99.0
19 TraesCS5B01G090800 chr7B 87.698 504 30 12 7831 8334 486458697 486458226 8.390000e-155 558.0
20 TraesCS5B01G090800 chrUn 93.559 295 5 4 9276 9563 305945868 305946155 2.470000e-115 427.0
21 TraesCS5B01G090800 chrUn 94.444 126 6 1 9150 9275 305945784 305945908 9.800000e-45 193.0
22 TraesCS5B01G090800 chr2B 90.847 295 12 4 9276 9563 521325946 521325660 1.950000e-101 381.0
23 TraesCS5B01G090800 chr2B 85.811 296 25 8 9276 9563 467554906 467554620 2.020000e-76 298.0
24 TraesCS5B01G090800 chr2B 80.159 126 24 1 9150 9275 467554990 467554866 1.020000e-14 93.5
25 TraesCS5B01G090800 chr7A 90.169 295 15 3 9276 9563 377638047 377638334 1.170000e-98 372.0
26 TraesCS5B01G090800 chr7A 85.813 289 22 10 9276 9563 5206980 5206710 1.220000e-73 289.0
27 TraesCS5B01G090800 chr7A 85.560 277 26 7 9294 9563 511879427 511879158 2.630000e-70 278.0
28 TraesCS5B01G090800 chr7A 90.598 117 10 1 9149 9265 5207065 5206950 4.620000e-33 154.0
29 TraesCS5B01G090800 chr7A 82.836 134 14 5 1960 2090 538339400 538339527 2.820000e-20 111.0
30 TraesCS5B01G090800 chr7A 92.208 77 6 0 1961 2037 61787842 61787766 1.020000e-19 110.0
31 TraesCS5B01G090800 chr7D 87.200 250 23 5 9322 9563 261515594 261515842 9.460000e-70 276.0
32 TraesCS5B01G090800 chr3A 84.286 280 27 6 9294 9563 2147984 2147712 3.430000e-64 257.0
33 TraesCS5B01G090800 chr3A 81.250 128 19 5 9150 9275 596920647 596920771 2.200000e-16 99.0
34 TraesCS5B01G090800 chr3A 80.800 125 19 5 9150 9272 596869663 596869784 1.020000e-14 93.5
35 TraesCS5B01G090800 chr3A 80.315 127 22 3 9150 9275 649830554 649830678 1.020000e-14 93.5
36 TraesCS5B01G090800 chr1B 83.217 286 34 4 9276 9554 113086637 113086915 5.730000e-62 250.0
37 TraesCS5B01G090800 chr1B 79.545 220 25 6 1891 2094 123953533 123953318 1.300000e-28 139.0
38 TraesCS5B01G090800 chr3D 82.034 295 42 11 9276 9563 89271786 89272076 3.450000e-59 241.0
39 TraesCS5B01G090800 chr3D 80.645 155 14 5 1891 2030 502893218 502893371 1.310000e-18 106.0
40 TraesCS5B01G090800 chr6A 81.308 214 22 9 1891 2089 481744844 481744634 3.580000e-34 158.0
41 TraesCS5B01G090800 chr1D 80.365 219 23 9 1891 2093 383758233 383758019 2.150000e-31 148.0
42 TraesCS5B01G090800 chr1D 88.060 67 5 2 1891 1957 493478468 493478405 1.030000e-09 76.8
43 TraesCS5B01G090800 chr2D 79.630 162 18 4 1895 2042 186993904 186994064 1.700000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G090800 chr5B 117896236 117905798 9562 True 17660.00 17660 100.000000 1 9563 1 chr5B.!!$R1 9562
1 TraesCS5B01G090800 chr5A 110661995 110671402 9407 True 3624.25 8704 94.197750 1 9151 4 chr5A.!!$R2 9150
2 TraesCS5B01G090800 chr5D 107777443 107786669 9226 True 4828.00 8672 95.133667 1 9151 3 chr5D.!!$R1 9150
3 TraesCS5B01G090800 chr2A 685527995 685528883 888 False 623.00 887 91.949000 946 1907 2 chr2A.!!$F2 961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
647 654 0.245539 CGAACGCCTCTCCAACCTTA 59.754 55.000 0.00 0.00 0.00 2.69 F
1569 1581 1.376553 GGGCAGACTGCTCAGGTTC 60.377 63.158 25.92 8.13 45.01 3.62 F
2593 2627 0.036732 TGAGTCCCCACACTCATTGC 59.963 55.000 0.00 0.00 46.43 3.56 F
2906 2940 1.886655 GCTTGGGGTCCAAATTCTCGT 60.887 52.381 0.84 0.00 43.44 4.18 F
3928 3975 3.454812 GTCCCTCTAGCAATTTCCCTGTA 59.545 47.826 0.00 0.00 0.00 2.74 F
4879 4926 1.343465 TGTGTTTCTCCTCGTTCTCCC 59.657 52.381 0.00 0.00 0.00 4.30 F
5662 5747 0.324923 ATGCCATTGACACCCTGCAT 60.325 50.000 0.00 0.00 34.81 3.96 F
6494 6839 0.622665 AAGGCTGGAGTTGATGGGAG 59.377 55.000 0.00 0.00 0.00 4.30 F
7360 7705 0.325671 AGTAGCAGCCAGGCCTAAGA 60.326 55.000 3.98 0.00 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1694 1706 0.826715 GGCACTCCTGTCTGCTGATA 59.173 55.000 0.00 0.00 33.63 2.15 R
3530 3576 1.995626 GCAGGTAGGCTCTTCCCCA 60.996 63.158 0.00 0.00 34.51 4.96 R
3718 3765 0.681887 TTCCATCATGTGCCTGCTGG 60.682 55.000 5.03 5.03 34.43 4.85 R
4575 4622 0.749454 GGCGCCATCATCAGTTTCCT 60.749 55.000 24.80 0.00 0.00 3.36 R
5575 5660 0.390860 AGCCTGAGTCTGTGACACAC 59.609 55.000 3.56 0.00 34.60 3.82 R
6321 6666 0.509499 CAGCTTGCAATTGTTTGGCG 59.491 50.000 7.40 1.24 33.22 5.69 R
6997 7342 0.242017 GGTGCATTCTGCTGACCAAC 59.758 55.000 0.00 0.00 45.31 3.77 R
8469 8814 0.182537 TGACAAAGTGACCACCAGGG 59.817 55.000 0.00 0.00 44.81 4.45 R
9273 9620 0.033504 TGTCAACCAGAGAAGACGGC 59.966 55.000 0.00 0.00 33.83 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 72 1.310933 GCAATGCTCCCTGTCCAGTG 61.311 60.000 0.00 0.00 0.00 3.66
89 91 3.008049 AGTGTAGGGGACATGTCTCAAAC 59.992 47.826 26.63 21.87 41.14 2.93
92 94 2.057922 AGGGGACATGTCTCAAACAGT 58.942 47.619 26.63 1.41 42.37 3.55
239 243 7.596248 ACATATCAGCAACACAAAACAAGATTC 59.404 33.333 0.00 0.00 0.00 2.52
261 265 3.706802 TGCACACAACCAACATTACAG 57.293 42.857 0.00 0.00 0.00 2.74
262 266 3.020274 TGCACACAACCAACATTACAGT 58.980 40.909 0.00 0.00 0.00 3.55
265 269 3.020274 ACACAACCAACATTACAGTGCA 58.980 40.909 0.00 0.00 0.00 4.57
266 270 3.445450 ACACAACCAACATTACAGTGCAA 59.555 39.130 0.00 0.00 0.00 4.08
267 271 4.081972 ACACAACCAACATTACAGTGCAAA 60.082 37.500 0.00 0.00 0.00 3.68
290 294 2.827383 GAAGCGCTCTCACGAGGCTT 62.827 60.000 12.06 13.85 46.73 4.35
321 325 4.262894 CGGCCCCAATTACTAGTGATACAT 60.263 45.833 5.39 0.00 0.00 2.29
408 415 1.536496 CGAACCGTGTACACTTGTGGA 60.536 52.381 23.01 0.00 0.00 4.02
538 545 0.737715 GCAGAGCCCAACACTCGTAG 60.738 60.000 0.00 0.00 39.23 3.51
647 654 0.245539 CGAACGCCTCTCCAACCTTA 59.754 55.000 0.00 0.00 0.00 2.69
649 656 2.100252 CGAACGCCTCTCCAACCTTATA 59.900 50.000 0.00 0.00 0.00 0.98
650 657 3.455327 GAACGCCTCTCCAACCTTATAC 58.545 50.000 0.00 0.00 0.00 1.47
785 792 2.513897 GGGTTCCCGCGGATTCTG 60.514 66.667 30.73 9.82 0.00 3.02
970 977 2.987125 CTCGATTTGGACCCCCGT 59.013 61.111 0.00 0.00 34.29 5.28
1325 1336 4.937620 TGTCTGGTTCAATTCTATGCTGTC 59.062 41.667 0.00 0.00 0.00 3.51
1366 1377 1.828595 TGTGTGGTATGGTATCTGCGT 59.171 47.619 0.00 0.00 0.00 5.24
1467 1478 1.412710 TGCTTCGTTTCCTCTCAGTGT 59.587 47.619 0.00 0.00 0.00 3.55
1468 1479 2.626266 TGCTTCGTTTCCTCTCAGTGTA 59.374 45.455 0.00 0.00 0.00 2.90
1523 1534 7.821846 AGTCAGTTATCTGCTTTCTCTTAAAGG 59.178 37.037 0.00 0.00 41.10 3.11
1524 1535 7.819900 GTCAGTTATCTGCTTTCTCTTAAAGGA 59.180 37.037 0.00 0.00 41.10 3.36
1569 1581 1.376553 GGGCAGACTGCTCAGGTTC 60.377 63.158 25.92 8.13 45.01 3.62
1607 1619 7.064609 GTCAGTGAACCTTTATGAATGATTCGA 59.935 37.037 0.00 0.00 0.00 3.71
1609 1621 6.316390 AGTGAACCTTTATGAATGATTCGACC 59.684 38.462 0.18 0.00 0.00 4.79
1629 1641 7.800767 TCGACCGAGTATGTATTTAGTGTATC 58.199 38.462 0.00 0.00 0.00 2.24
1691 1703 4.811024 GGCTCATATCACGTTTCATCTTGA 59.189 41.667 0.00 0.00 0.00 3.02
1694 1706 5.977635 TCATATCACGTTTCATCTTGACCT 58.022 37.500 0.00 0.00 0.00 3.85
1715 1727 2.527624 AGCAGACAGGAGTGCCCA 60.528 61.111 0.00 0.00 40.81 5.36
1931 1949 6.596309 TTCATGGCAATTTACATTGGTGTA 57.404 33.333 3.87 0.00 40.36 2.90
2021 2054 0.690192 TTGCCATCCTCGGAGAACAA 59.310 50.000 6.58 0.83 34.09 2.83
2029 2062 2.556622 TCCTCGGAGAACAAAATTTGCC 59.443 45.455 6.58 0.00 34.09 4.52
2030 2063 2.558359 CCTCGGAGAACAAAATTTGCCT 59.442 45.455 6.58 3.39 34.09 4.75
2040 2073 8.054152 AGAACAAAATTTGCCTTGAAAAATGT 57.946 26.923 5.52 0.00 0.00 2.71
2159 2192 6.912203 TTTGCAATGCCATTTGATAGAATG 57.088 33.333 1.53 0.00 36.89 2.67
2176 2209 8.041323 TGATAGAATGTTTGTAGTTCTCTTCCC 58.959 37.037 0.00 0.00 34.33 3.97
2304 2337 5.737290 CGCGCTTAATAATTGTTGCTTAGTT 59.263 36.000 5.56 0.00 0.00 2.24
2305 2338 6.902948 CGCGCTTAATAATTGTTGCTTAGTTA 59.097 34.615 5.56 0.00 0.00 2.24
2328 2361 2.845019 GCACTGCTGCTGATGTACA 58.155 52.632 13.69 0.00 40.63 2.90
2372 2405 4.007457 GCTTTCTGCAGATGGGCA 57.993 55.556 19.04 0.00 42.53 5.36
2490 2523 9.003112 CATTGTAAGCGAAATCTTATCTTTGTG 57.997 33.333 0.00 0.00 31.92 3.33
2593 2627 0.036732 TGAGTCCCCACACTCATTGC 59.963 55.000 0.00 0.00 46.43 3.56
2647 2681 6.647229 TGAGATTTGATGCTACTCATTCAGT 58.353 36.000 0.00 0.00 39.41 3.41
2663 2697 9.125026 ACTCATTCAGTGTTCTCAATAGTTTTT 57.875 29.630 0.00 0.00 32.26 1.94
2762 2796 3.196039 CACCAAATGCATGGAATTCCTCA 59.804 43.478 24.73 18.67 43.54 3.86
2906 2940 1.886655 GCTTGGGGTCCAAATTCTCGT 60.887 52.381 0.84 0.00 43.44 4.18
3071 3105 3.865745 GGACTGTTGACAGATCGGTAATG 59.134 47.826 17.42 0.00 46.59 1.90
3079 3113 5.423886 TGACAGATCGGTAATGCACAATAA 58.576 37.500 0.00 0.00 0.00 1.40
3214 3251 5.906073 CCAACACTTGGTTCTGAGAAAATT 58.094 37.500 0.00 0.00 45.93 1.82
3530 3576 6.408434 GGCAAAGATGGAACCCAAAATGATAT 60.408 38.462 0.00 0.00 36.95 1.63
3718 3765 4.989797 CCAGCAGATATCATGAAGACAGAC 59.010 45.833 5.32 0.00 0.00 3.51
3816 3863 3.910627 CCTCCTAACTATTGTATGCCCCT 59.089 47.826 0.00 0.00 0.00 4.79
3853 3900 4.415150 CGTGCACCTCCTGGCCAT 62.415 66.667 5.51 0.00 36.63 4.40
3928 3975 3.454812 GTCCCTCTAGCAATTTCCCTGTA 59.545 47.826 0.00 0.00 0.00 2.74
4135 4182 4.955811 TGGATATTATGCTCCTCAACGT 57.044 40.909 0.00 0.00 32.47 3.99
4175 4222 5.504665 GCCAATGTAAGAGATTCACCATTCG 60.505 44.000 0.00 0.00 0.00 3.34
4177 4224 6.238211 CCAATGTAAGAGATTCACCATTCGTC 60.238 42.308 0.00 0.00 0.00 4.20
4312 4359 5.414454 GCTCTCCGAATCTGATAGAGTACAT 59.586 44.000 13.78 0.00 36.80 2.29
4324 4371 8.251026 TCTGATAGAGTACATTTGATTTGTCGT 58.749 33.333 0.00 0.00 0.00 4.34
4476 4523 4.349930 GGCAGATACAAGGAATACCCCTAA 59.650 45.833 0.00 0.00 34.95 2.69
4543 4590 4.439057 GTCCTAATCGTACAAGCCATTCA 58.561 43.478 0.00 0.00 0.00 2.57
4575 4622 2.250921 AATGCACATTCCCATCCCAA 57.749 45.000 0.00 0.00 0.00 4.12
4717 4764 3.599343 AGCTAGAAATGTTGATGCACGA 58.401 40.909 0.00 0.00 0.00 4.35
4719 4766 4.093998 AGCTAGAAATGTTGATGCACGAAG 59.906 41.667 0.00 0.00 0.00 3.79
4825 4872 3.653164 TGTTCCATCTACTCCTGCCATA 58.347 45.455 0.00 0.00 0.00 2.74
4879 4926 1.343465 TGTGTTTCTCCTCGTTCTCCC 59.657 52.381 0.00 0.00 0.00 4.30
4884 4931 3.358076 CTCCTCGTTCTCCCGTGGC 62.358 68.421 0.00 0.00 40.38 5.01
4902 4949 1.597742 GCACAGAAACTGCAGAAGGA 58.402 50.000 23.35 0.00 34.37 3.36
4904 4951 2.555757 GCACAGAAACTGCAGAAGGAAT 59.444 45.455 23.35 0.00 34.37 3.01
4918 4965 3.392616 AGAAGGAATCTAATGATGGCGGT 59.607 43.478 0.00 0.00 36.32 5.68
5035 5082 6.843936 TTCTTCAAGAAATAGCCACCATGGC 61.844 44.000 13.04 12.05 46.90 4.40
5063 5110 2.014010 AGACATGCCACCCAACAATT 57.986 45.000 0.00 0.00 0.00 2.32
5148 5195 2.993008 TCAGCATGACCAGCCTCC 59.007 61.111 0.00 0.00 42.56 4.30
5165 5212 2.753966 CCGGAGCATGTTTCGCAGG 61.754 63.158 4.45 0.00 0.00 4.85
5211 5258 3.070018 CACCCGATTATGAATCTCAGGC 58.930 50.000 0.00 0.00 35.73 4.85
5331 5378 6.078202 TGTTCGGAAAATATTTGTGCAAGA 57.922 33.333 0.39 0.00 0.00 3.02
5336 5383 7.846485 TCGGAAAATATTTGTGCAAGAAAAAC 58.154 30.769 0.39 0.00 30.79 2.43
5342 5389 9.566432 AAATATTTGTGCAAGAAAAACCCAATA 57.434 25.926 0.00 0.00 30.79 1.90
5428 5513 3.161067 AGCTACTTTCTCAGCTCTCACA 58.839 45.455 0.00 0.00 44.83 3.58
5442 5527 8.932434 TCAGCTCTCACAAGTAATATATCTCT 57.068 34.615 0.00 0.00 0.00 3.10
5470 5555 7.448161 CACATATCCATTAAAAGTATGAGGGCA 59.552 37.037 0.00 0.00 0.00 5.36
5494 5579 7.558991 CATGTATAGTTCATTACTGCACTTCG 58.441 38.462 0.00 0.00 37.73 3.79
5529 5614 2.738846 GTGCAAGTGTGACTGGTAGATG 59.261 50.000 0.00 0.00 0.00 2.90
5535 5620 3.815401 AGTGTGACTGGTAGATGTTTTGC 59.185 43.478 0.00 0.00 0.00 3.68
5542 5627 6.939730 TGACTGGTAGATGTTTTGCTTCATTA 59.060 34.615 0.00 0.00 0.00 1.90
5575 5660 2.620112 CCTTGGGTTCTGCAGCACG 61.620 63.158 9.47 0.00 0.00 5.34
5584 5669 2.125350 TGCAGCACGTGTGTCACA 60.125 55.556 18.38 0.18 33.40 3.58
5591 5676 1.481240 CACGTGTGTCACAGACTCAG 58.519 55.000 5.74 0.00 36.86 3.35
5653 5738 3.059166 GTCAACCAAACATGCCATTGAC 58.941 45.455 11.00 11.00 39.19 3.18
5662 5747 0.324923 ATGCCATTGACACCCTGCAT 60.325 50.000 0.00 0.00 34.81 3.96
5672 5757 4.009675 TGACACCCTGCATTAGTCAATTC 58.990 43.478 8.40 0.00 36.39 2.17
5693 5778 9.308318 CAATTCATATTCATCAAGTGCATTTCA 57.692 29.630 0.00 0.00 0.00 2.69
5735 5820 7.328277 TGTTGGCATTGTTAGTCCATAATAC 57.672 36.000 0.00 0.00 0.00 1.89
5788 5873 5.774690 AGCTATTGTTTGGACTTCCATTTCA 59.225 36.000 0.00 0.00 46.97 2.69
5805 5890 9.605275 TTCCATTTCAATTAACAAATGTTGTCA 57.395 25.926 8.99 0.00 44.59 3.58
5886 5971 6.471841 TGTGTGTATTTTCATTATTGATGCGC 59.528 34.615 0.00 0.00 35.64 6.09
5934 6019 9.489084 TCGAATCTCAATAAATGGTACTAATGG 57.511 33.333 0.00 0.00 0.00 3.16
5943 6028 6.785337 AAATGGTACTAATGGCCTAAAACC 57.215 37.500 3.32 4.96 0.00 3.27
5960 6208 8.340443 GCCTAAAACCTCTTATATTTGGTTACG 58.660 37.037 0.00 0.00 41.36 3.18
5965 6213 7.191593 ACCTCTTATATTTGGTTACGGAGTT 57.808 36.000 0.00 0.00 37.78 3.01
6032 6280 5.670485 TGTCACATGACTTGTTCTTGTAGT 58.330 37.500 12.98 0.00 44.99 2.73
6035 6283 7.145985 GTCACATGACTTGTTCTTGTAGTCTA 58.854 38.462 0.00 0.00 39.91 2.59
6041 6289 6.038997 ACTTGTTCTTGTAGTCTACCATCC 57.961 41.667 7.56 0.00 0.00 3.51
6045 6293 6.698380 TGTTCTTGTAGTCTACCATCCTTTC 58.302 40.000 7.56 0.00 0.00 2.62
6111 6359 3.201290 CTGCCTGCTTACCAGTCTTATG 58.799 50.000 0.00 0.00 40.06 1.90
6112 6360 2.571653 TGCCTGCTTACCAGTCTTATGT 59.428 45.455 0.00 0.00 40.06 2.29
6179 6524 9.774742 GCAGATTAAGAAGTTTTACTACATTGG 57.225 33.333 0.00 0.00 0.00 3.16
6209 6554 8.299570 ACTTTCTTAATAACCTGTGCAATTCTG 58.700 33.333 0.00 0.00 0.00 3.02
6225 6570 7.137490 GCAATTCTGCTAATATGCATACTGA 57.863 36.000 8.99 3.23 45.74 3.41
6226 6571 7.759465 GCAATTCTGCTAATATGCATACTGAT 58.241 34.615 8.99 0.00 45.74 2.90
6227 6572 7.696872 GCAATTCTGCTAATATGCATACTGATG 59.303 37.037 8.99 3.97 45.74 3.07
6260 6605 3.790089 AGCCTTGTTGCCTACTAACTT 57.210 42.857 0.00 0.00 0.00 2.66
6270 6615 8.263940 TGTTGCCTACTAACTTGTATTTGATC 57.736 34.615 0.00 0.00 0.00 2.92
6282 6627 5.635417 TGTATTTGATCGTTGCATTTCCA 57.365 34.783 0.00 0.00 0.00 3.53
6427 6772 4.158579 AGCGTTCATCAGTACATCAGAAGA 59.841 41.667 0.00 0.00 0.00 2.87
6464 6809 0.865111 CCAGAAAATGACGACGTGCA 59.135 50.000 4.58 3.74 0.00 4.57
6473 6818 2.198406 TGACGACGTGCATAATAAGCC 58.802 47.619 4.58 0.00 0.00 4.35
6494 6839 0.622665 AAGGCTGGAGTTGATGGGAG 59.377 55.000 0.00 0.00 0.00 4.30
6507 6852 1.555075 GATGGGAGTACTGAACCTGCA 59.445 52.381 0.00 0.00 0.00 4.41
6535 6880 4.959596 ACTGCTGAATCACATGATGTTC 57.040 40.909 0.00 0.76 34.49 3.18
6570 6915 4.901197 TGTTAGTATTCTTCAGCCACCA 57.099 40.909 0.00 0.00 0.00 4.17
6624 6969 4.277174 CAGCCCATGTCTACTCTACTACAG 59.723 50.000 0.00 0.00 0.00 2.74
6647 6992 3.707102 GCTGAGGGTACAGGTAAAGATCT 59.293 47.826 0.00 0.00 38.22 2.75
6698 7043 3.479489 TGAACACACAGAGCAACATGAT 58.521 40.909 0.00 0.00 0.00 2.45
6728 7073 9.613428 GCATATAGCCCATAAAAGTATATCACA 57.387 33.333 0.00 0.00 37.23 3.58
6748 7093 5.243730 TCACAGTCACATGATCTCAGTGTTA 59.756 40.000 0.00 0.00 34.94 2.41
6813 7158 7.607991 TCAGAGGATAAAATTCTTGGTGAGAAC 59.392 37.037 0.00 0.00 46.66 3.01
6973 7318 2.039818 AGTTGATGATGCTCCTGCTG 57.960 50.000 0.00 0.00 40.48 4.41
7012 7357 1.955778 TGGTTGTTGGTCAGCAGAATG 59.044 47.619 0.00 0.00 40.87 2.67
7053 7398 3.135225 GCCAAAAATAAAAACCGCTGGT 58.865 40.909 0.00 0.00 37.65 4.00
7089 7434 8.763601 AGTAGTTCTATACTTCCTGCTGAAAAT 58.236 33.333 0.00 0.00 38.33 1.82
7092 7437 8.763601 AGTTCTATACTTCCTGCTGAAAATACT 58.236 33.333 0.00 0.00 31.29 2.12
7101 7446 4.455533 CCTGCTGAAAATACTGTGCTTACA 59.544 41.667 0.00 0.00 0.00 2.41
7333 7678 2.775911 TGAACCATCTGAGGAAGCTG 57.224 50.000 0.00 0.00 0.00 4.24
7360 7705 0.325671 AGTAGCAGCCAGGCCTAAGA 60.326 55.000 3.98 0.00 0.00 2.10
7614 7959 0.731417 CTCATTCTTCTTGGCGCAGG 59.269 55.000 10.83 0.00 0.00 4.85
7621 7966 0.677731 TTCTTGGCGCAGGAGGAATG 60.678 55.000 10.83 0.00 0.00 2.67
7686 8031 4.815308 GCAGACAGCTATCAAGAATCACAT 59.185 41.667 0.00 0.00 41.15 3.21
7715 8060 3.044156 AGAGGCCTTCTGATAAGCATCA 58.956 45.455 6.77 0.00 38.44 3.07
7716 8061 3.457380 AGAGGCCTTCTGATAAGCATCAA 59.543 43.478 6.77 0.00 40.66 2.57
7740 8085 1.000938 CTTGAACCTGACAAGCAAGCC 60.001 52.381 0.00 0.00 38.28 4.35
7771 8116 1.340600 CCGGGAATAGTTTGGCTCCAA 60.341 52.381 0.00 0.00 0.00 3.53
7819 8164 1.489574 CGCAAAAGAACATGCTGCAA 58.510 45.000 6.36 0.00 40.39 4.08
7926 8271 2.547634 TGTGAATCACATGTCAACACGG 59.452 45.455 12.63 0.00 39.62 4.94
7965 8310 7.675062 ACTCTTCTGAACATAGAAACATGTCT 58.325 34.615 0.00 0.00 38.19 3.41
8042 8387 4.768968 ACCAAAATCTTCACATTCCCAGAG 59.231 41.667 0.00 0.00 0.00 3.35
8111 8456 3.024431 TGCAAGACAGCAGCAATCA 57.976 47.368 0.00 0.00 40.11 2.57
8114 8459 2.681344 TGCAAGACAGCAGCAATCATAG 59.319 45.455 0.00 0.00 40.11 2.23
8175 8520 1.216710 CCAGAAGGGCGAGAGTCAC 59.783 63.158 0.00 0.00 37.54 3.67
8253 8598 1.625508 GGGAGGTATCACAGGGGAAGT 60.626 57.143 0.00 0.00 0.00 3.01
8254 8599 1.486726 GGAGGTATCACAGGGGAAGTG 59.513 57.143 0.00 0.00 38.32 3.16
8430 8775 2.284921 CCTCCAGCTCCAGGACCA 60.285 66.667 1.55 0.00 30.32 4.02
8585 8930 2.437396 CCCTTGCCCCCATGATTGC 61.437 63.158 0.00 0.00 0.00 3.56
8599 8944 5.009410 CCCATGATTGCTGAGATTTAGGAAC 59.991 44.000 0.00 0.00 0.00 3.62
8632 8977 3.568007 TCACAACAGGTAGGCAAATGAAC 59.432 43.478 0.00 0.00 0.00 3.18
8641 8986 6.375455 CAGGTAGGCAAATGAACTATTTCAGT 59.625 38.462 1.80 0.00 45.07 3.41
8833 9180 5.837437 AGCGTGTGATTGTTAATTTTTCCA 58.163 33.333 0.00 0.00 0.00 3.53
8837 9184 7.043059 GCGTGTGATTGTTAATTTTTCCAAAGA 60.043 33.333 0.00 0.00 0.00 2.52
8903 9250 4.715297 ACGGAGTTGATTAAGTACTGGGAT 59.285 41.667 0.00 0.00 37.78 3.85
8997 9344 3.751175 CGGTACATGAAAGTTGGTGTCAT 59.249 43.478 0.00 0.00 32.17 3.06
9028 9375 1.480954 TCCGTTGACTGGAAGATAGGC 59.519 52.381 0.00 0.00 37.43 3.93
9067 9414 9.912634 ATTGACTTCTTTTGTACAATATGGTTG 57.087 29.630 9.56 0.26 0.00 3.77
9134 9481 0.250338 GCTCCTGGTTTCGTTCACCT 60.250 55.000 0.00 0.00 35.07 4.00
9151 9498 7.977853 TCGTTCACCTAATCTTTTGATAGGTAC 59.022 37.037 3.57 0.00 39.07 3.34
9152 9499 7.980099 CGTTCACCTAATCTTTTGATAGGTACT 59.020 37.037 3.57 0.00 39.07 2.73
9153 9500 9.315525 GTTCACCTAATCTTTTGATAGGTACTC 57.684 37.037 3.57 0.00 39.07 2.59
9154 9501 8.019656 TCACCTAATCTTTTGATAGGTACTCC 57.980 38.462 3.57 0.00 39.07 3.85
9155 9502 7.070821 TCACCTAATCTTTTGATAGGTACTCCC 59.929 40.741 3.57 0.00 39.07 4.30
9157 9504 7.628101 ACCTAATCTTTTGATAGGTACTCCCTT 59.372 37.037 1.99 0.00 45.40 3.95
9158 9505 8.151596 CCTAATCTTTTGATAGGTACTCCCTTC 58.848 40.741 0.00 0.00 45.40 3.46
9159 9506 5.952347 TCTTTTGATAGGTACTCCCTTCC 57.048 43.478 0.00 0.00 42.73 3.46
9160 9507 4.404715 TCTTTTGATAGGTACTCCCTTCCG 59.595 45.833 0.00 0.00 42.73 4.30
9161 9508 3.393426 TTGATAGGTACTCCCTTCCGT 57.607 47.619 0.00 0.00 42.73 4.69
9162 9509 2.941480 TGATAGGTACTCCCTTCCGTC 58.059 52.381 0.00 0.00 42.73 4.79
9163 9510 2.512896 TGATAGGTACTCCCTTCCGTCT 59.487 50.000 0.00 0.00 42.73 4.18
9164 9511 3.053095 TGATAGGTACTCCCTTCCGTCTT 60.053 47.826 0.00 0.00 42.73 3.01
9165 9512 1.558233 AGGTACTCCCTTCCGTCTTG 58.442 55.000 0.00 0.00 42.73 3.02
9166 9513 0.535797 GGTACTCCCTTCCGTCTTGG 59.464 60.000 0.00 0.00 40.09 3.61
9167 9514 4.237290 AGGTACTCCCTTCCGTCTTGGA 62.237 54.545 0.00 0.00 42.73 3.53
9177 9524 2.567985 TCCGTCTTGGAAAAGTTGTCC 58.432 47.619 4.98 4.98 46.38 4.02
9178 9525 2.171870 TCCGTCTTGGAAAAGTTGTCCT 59.828 45.455 13.44 0.00 46.38 3.85
9179 9526 2.548480 CCGTCTTGGAAAAGTTGTCCTC 59.452 50.000 13.44 1.35 42.00 3.71
9180 9527 3.202906 CGTCTTGGAAAAGTTGTCCTCA 58.797 45.455 13.44 0.00 36.03 3.86
9181 9528 3.815401 CGTCTTGGAAAAGTTGTCCTCAT 59.185 43.478 13.44 0.00 36.03 2.90
9182 9529 4.319766 CGTCTTGGAAAAGTTGTCCTCATG 60.320 45.833 13.44 1.59 36.03 3.07
9183 9530 4.022849 GTCTTGGAAAAGTTGTCCTCATGG 60.023 45.833 13.44 0.02 36.03 3.66
9184 9531 3.593442 TGGAAAAGTTGTCCTCATGGT 57.407 42.857 13.44 0.00 36.03 3.55
9185 9532 3.486383 TGGAAAAGTTGTCCTCATGGTC 58.514 45.455 13.44 0.00 36.03 4.02
9186 9533 3.117701 TGGAAAAGTTGTCCTCATGGTCA 60.118 43.478 13.44 0.00 36.03 4.02
9187 9534 4.082125 GGAAAAGTTGTCCTCATGGTCAT 58.918 43.478 4.66 0.00 31.86 3.06
9188 9535 4.524328 GGAAAAGTTGTCCTCATGGTCATT 59.476 41.667 4.66 0.00 31.86 2.57
9189 9536 5.011023 GGAAAAGTTGTCCTCATGGTCATTT 59.989 40.000 4.66 0.00 31.86 2.32
9190 9537 6.462909 GGAAAAGTTGTCCTCATGGTCATTTT 60.463 38.462 4.66 0.00 31.38 1.82
9191 9538 7.255801 GGAAAAGTTGTCCTCATGGTCATTTTA 60.256 37.037 4.66 0.00 30.02 1.52
9192 9539 6.575162 AAGTTGTCCTCATGGTCATTTTAC 57.425 37.500 0.00 0.00 31.86 2.01
9193 9540 5.630121 AGTTGTCCTCATGGTCATTTTACA 58.370 37.500 0.00 0.00 31.86 2.41
9194 9541 5.707298 AGTTGTCCTCATGGTCATTTTACAG 59.293 40.000 0.00 0.00 31.86 2.74
9195 9542 5.497464 TGTCCTCATGGTCATTTTACAGA 57.503 39.130 0.00 0.00 34.23 3.41
9196 9543 5.875224 TGTCCTCATGGTCATTTTACAGAA 58.125 37.500 0.00 0.00 34.23 3.02
9197 9544 6.303054 TGTCCTCATGGTCATTTTACAGAAA 58.697 36.000 0.00 0.00 34.23 2.52
9198 9545 6.206634 TGTCCTCATGGTCATTTTACAGAAAC 59.793 38.462 0.00 0.00 34.23 2.78
9199 9546 6.206634 GTCCTCATGGTCATTTTACAGAAACA 59.793 38.462 0.00 0.00 34.23 2.83
9200 9547 6.206634 TCCTCATGGTCATTTTACAGAAACAC 59.793 38.462 0.00 0.00 34.23 3.32
9201 9548 6.325919 TCATGGTCATTTTACAGAAACACC 57.674 37.500 0.00 0.00 0.00 4.16
9202 9549 5.242838 TCATGGTCATTTTACAGAAACACCC 59.757 40.000 0.00 0.00 0.00 4.61
9203 9550 4.798882 TGGTCATTTTACAGAAACACCCT 58.201 39.130 0.00 0.00 0.00 4.34
9204 9551 4.825085 TGGTCATTTTACAGAAACACCCTC 59.175 41.667 0.00 0.00 0.00 4.30
9205 9552 4.825085 GGTCATTTTACAGAAACACCCTCA 59.175 41.667 0.00 0.00 0.00 3.86
9206 9553 5.048713 GGTCATTTTACAGAAACACCCTCAG 60.049 44.000 0.00 0.00 0.00 3.35
9207 9554 4.518970 TCATTTTACAGAAACACCCTCAGC 59.481 41.667 0.00 0.00 0.00 4.26
9208 9555 3.857157 TTTACAGAAACACCCTCAGCT 57.143 42.857 0.00 0.00 0.00 4.24
9209 9556 4.967084 TTTACAGAAACACCCTCAGCTA 57.033 40.909 0.00 0.00 0.00 3.32
9210 9557 4.967084 TTACAGAAACACCCTCAGCTAA 57.033 40.909 0.00 0.00 0.00 3.09
9211 9558 5.499004 TTACAGAAACACCCTCAGCTAAT 57.501 39.130 0.00 0.00 0.00 1.73
9212 9559 4.373156 ACAGAAACACCCTCAGCTAATT 57.627 40.909 0.00 0.00 0.00 1.40
9213 9560 4.327680 ACAGAAACACCCTCAGCTAATTC 58.672 43.478 0.00 0.00 0.00 2.17
9214 9561 3.691609 CAGAAACACCCTCAGCTAATTCC 59.308 47.826 0.00 0.00 0.00 3.01
9215 9562 2.808906 AACACCCTCAGCTAATTCCC 57.191 50.000 0.00 0.00 0.00 3.97
9216 9563 0.541863 ACACCCTCAGCTAATTCCCG 59.458 55.000 0.00 0.00 0.00 5.14
9217 9564 0.830648 CACCCTCAGCTAATTCCCGA 59.169 55.000 0.00 0.00 0.00 5.14
9218 9565 0.831307 ACCCTCAGCTAATTCCCGAC 59.169 55.000 0.00 0.00 0.00 4.79
9219 9566 0.830648 CCCTCAGCTAATTCCCGACA 59.169 55.000 0.00 0.00 0.00 4.35
9220 9567 1.473434 CCCTCAGCTAATTCCCGACAC 60.473 57.143 0.00 0.00 0.00 3.67
9221 9568 1.207089 CCTCAGCTAATTCCCGACACA 59.793 52.381 0.00 0.00 0.00 3.72
9222 9569 2.544685 CTCAGCTAATTCCCGACACAG 58.455 52.381 0.00 0.00 0.00 3.66
9223 9570 1.009829 CAGCTAATTCCCGACACAGC 58.990 55.000 0.00 0.00 0.00 4.40
9224 9571 0.107654 AGCTAATTCCCGACACAGCC 60.108 55.000 0.00 0.00 0.00 4.85
9225 9572 1.095807 GCTAATTCCCGACACAGCCC 61.096 60.000 0.00 0.00 0.00 5.19
9226 9573 0.810031 CTAATTCCCGACACAGCCCG 60.810 60.000 0.00 0.00 0.00 6.13
9227 9574 2.862674 TAATTCCCGACACAGCCCGC 62.863 60.000 0.00 0.00 0.00 6.13
9233 9580 4.008933 GACACAGCCCGCACTCCT 62.009 66.667 0.00 0.00 0.00 3.69
9234 9581 3.941657 GACACAGCCCGCACTCCTC 62.942 68.421 0.00 0.00 0.00 3.71
9237 9584 4.803426 CAGCCCGCACTCCTCGTC 62.803 72.222 0.00 0.00 0.00 4.20
9239 9586 4.070552 GCCCGCACTCCTCGTCTT 62.071 66.667 0.00 0.00 0.00 3.01
9240 9587 2.182030 CCCGCACTCCTCGTCTTC 59.818 66.667 0.00 0.00 0.00 2.87
9241 9588 2.344203 CCCGCACTCCTCGTCTTCT 61.344 63.158 0.00 0.00 0.00 2.85
9242 9589 1.137825 CCGCACTCCTCGTCTTCTC 59.862 63.158 0.00 0.00 0.00 2.87
9243 9590 1.137825 CGCACTCCTCGTCTTCTCC 59.862 63.158 0.00 0.00 0.00 3.71
9244 9591 1.137825 GCACTCCTCGTCTTCTCCG 59.862 63.158 0.00 0.00 0.00 4.63
9245 9592 1.803943 CACTCCTCGTCTTCTCCGG 59.196 63.158 0.00 0.00 0.00 5.14
9246 9593 0.961358 CACTCCTCGTCTTCTCCGGT 60.961 60.000 0.00 0.00 0.00 5.28
9247 9594 0.677414 ACTCCTCGTCTTCTCCGGTC 60.677 60.000 0.00 0.00 0.00 4.79
9248 9595 1.707239 CTCCTCGTCTTCTCCGGTCG 61.707 65.000 0.00 0.00 0.00 4.79
9249 9596 1.744368 CCTCGTCTTCTCCGGTCGA 60.744 63.158 0.00 0.00 0.00 4.20
9250 9597 1.424635 CTCGTCTTCTCCGGTCGAC 59.575 63.158 7.13 7.13 0.00 4.20
9251 9598 1.296755 CTCGTCTTCTCCGGTCGACA 61.297 60.000 18.91 0.00 0.00 4.35
9252 9599 1.154263 CGTCTTCTCCGGTCGACAC 60.154 63.158 18.91 5.92 0.00 3.67
9253 9600 1.575576 CGTCTTCTCCGGTCGACACT 61.576 60.000 18.91 0.00 0.00 3.55
9254 9601 0.168568 GTCTTCTCCGGTCGACACTC 59.831 60.000 18.91 0.00 0.00 3.51
9255 9602 0.959372 TCTTCTCCGGTCGACACTCC 60.959 60.000 18.91 0.00 0.00 3.85
9256 9603 2.254703 CTTCTCCGGTCGACACTCCG 62.255 65.000 18.91 11.66 45.42 4.63
9257 9604 4.477975 CTCCGGTCGACACTCCGC 62.478 72.222 18.91 0.00 44.63 5.54
9265 9612 3.749064 GACACTCCGCCGCTCTGA 61.749 66.667 0.00 0.00 0.00 3.27
9266 9613 3.973267 GACACTCCGCCGCTCTGAC 62.973 68.421 0.00 0.00 0.00 3.51
9267 9614 4.056125 CACTCCGCCGCTCTGACA 62.056 66.667 0.00 0.00 0.00 3.58
9268 9615 3.071206 ACTCCGCCGCTCTGACAT 61.071 61.111 0.00 0.00 0.00 3.06
9269 9616 1.753078 ACTCCGCCGCTCTGACATA 60.753 57.895 0.00 0.00 0.00 2.29
9270 9617 1.007964 CTCCGCCGCTCTGACATAG 60.008 63.158 0.00 0.00 0.00 2.23
9271 9618 2.028190 CCGCCGCTCTGACATAGG 59.972 66.667 0.00 0.00 0.00 2.57
9272 9619 2.659897 CGCCGCTCTGACATAGGC 60.660 66.667 0.00 0.00 44.00 3.93
9273 9620 2.659897 GCCGCTCTGACATAGGCG 60.660 66.667 9.01 9.01 42.17 5.52
9274 9621 2.659897 CCGCTCTGACATAGGCGC 60.660 66.667 0.00 0.00 41.60 6.53
9275 9622 2.659897 CGCTCTGACATAGGCGCC 60.660 66.667 21.89 21.89 38.55 6.53
9276 9623 2.659897 GCTCTGACATAGGCGCCG 60.660 66.667 23.20 9.91 0.00 6.46
9277 9624 2.808315 CTCTGACATAGGCGCCGT 59.192 61.111 23.20 13.77 0.00 5.68
9278 9625 1.299468 CTCTGACATAGGCGCCGTC 60.299 63.158 23.20 22.35 0.00 4.79
9279 9626 1.729470 CTCTGACATAGGCGCCGTCT 61.729 60.000 26.46 12.53 0.00 4.18
9280 9627 1.141881 CTGACATAGGCGCCGTCTT 59.858 57.895 26.46 12.18 0.00 3.01
9281 9628 0.872021 CTGACATAGGCGCCGTCTTC 60.872 60.000 26.46 19.85 0.00 2.87
9282 9629 1.320344 TGACATAGGCGCCGTCTTCT 61.320 55.000 26.46 11.14 0.00 2.85
9283 9630 0.595310 GACATAGGCGCCGTCTTCTC 60.595 60.000 23.20 8.44 0.00 2.87
9284 9631 1.038130 ACATAGGCGCCGTCTTCTCT 61.038 55.000 23.20 2.71 0.00 3.10
9285 9632 0.596083 CATAGGCGCCGTCTTCTCTG 60.596 60.000 23.20 6.98 0.00 3.35
9286 9633 1.739338 ATAGGCGCCGTCTTCTCTGG 61.739 60.000 23.20 0.00 0.00 3.86
9287 9634 4.070552 GGCGCCGTCTTCTCTGGT 62.071 66.667 12.58 0.00 0.00 4.00
9288 9635 2.048127 GCGCCGTCTTCTCTGGTT 60.048 61.111 0.00 0.00 0.00 3.67
9289 9636 2.383527 GCGCCGTCTTCTCTGGTTG 61.384 63.158 0.00 0.00 0.00 3.77
9290 9637 1.289066 CGCCGTCTTCTCTGGTTGA 59.711 57.895 0.00 0.00 0.00 3.18
9291 9638 1.009389 CGCCGTCTTCTCTGGTTGAC 61.009 60.000 0.00 0.00 0.00 3.18
9292 9639 0.033504 GCCGTCTTCTCTGGTTGACA 59.966 55.000 0.00 0.00 0.00 3.58
9293 9640 1.784525 CCGTCTTCTCTGGTTGACAC 58.215 55.000 0.00 0.00 0.00 3.67
9294 9641 1.341531 CCGTCTTCTCTGGTTGACACT 59.658 52.381 0.00 0.00 0.00 3.55
9295 9642 2.608261 CCGTCTTCTCTGGTTGACACTC 60.608 54.545 0.00 0.00 0.00 3.51
9296 9643 2.608261 CGTCTTCTCTGGTTGACACTCC 60.608 54.545 0.00 0.00 0.00 3.85
9297 9644 1.613925 TCTTCTCTGGTTGACACTCCG 59.386 52.381 0.00 0.00 0.00 4.63
9298 9645 0.033504 TTCTCTGGTTGACACTCCGC 59.966 55.000 0.00 0.00 0.00 5.54
9299 9646 1.374758 CTCTGGTTGACACTCCGCC 60.375 63.158 0.00 0.00 0.00 6.13
9300 9647 2.738521 CTGGTTGACACTCCGCCG 60.739 66.667 0.00 0.00 0.00 6.46
9301 9648 4.980805 TGGTTGACACTCCGCCGC 62.981 66.667 0.00 0.00 0.00 6.53
9302 9649 4.681978 GGTTGACACTCCGCCGCT 62.682 66.667 0.00 0.00 0.00 5.52
9303 9650 3.112709 GTTGACACTCCGCCGCTC 61.113 66.667 0.00 0.00 0.00 5.03
9304 9651 3.303135 TTGACACTCCGCCGCTCT 61.303 61.111 0.00 0.00 0.00 4.09
9305 9652 3.573772 TTGACACTCCGCCGCTCTG 62.574 63.158 0.00 0.00 0.00 3.35
9306 9653 3.749064 GACACTCCGCCGCTCTGA 61.749 66.667 0.00 0.00 0.00 3.27
9307 9654 3.973267 GACACTCCGCCGCTCTGAC 62.973 68.421 0.00 0.00 0.00 3.51
9308 9655 4.056125 CACTCCGCCGCTCTGACA 62.056 66.667 0.00 0.00 0.00 3.58
9309 9656 3.071206 ACTCCGCCGCTCTGACAT 61.071 61.111 0.00 0.00 0.00 3.06
9310 9657 1.753078 ACTCCGCCGCTCTGACATA 60.753 57.895 0.00 0.00 0.00 2.29
9311 9658 1.007964 CTCCGCCGCTCTGACATAG 60.008 63.158 0.00 0.00 0.00 2.23
9312 9659 2.028190 CCGCCGCTCTGACATAGG 59.972 66.667 0.00 0.00 0.00 2.57
9313 9660 2.659897 CGCCGCTCTGACATAGGC 60.660 66.667 0.00 0.00 44.00 3.93
9314 9661 2.659897 GCCGCTCTGACATAGGCG 60.660 66.667 9.01 9.01 42.17 5.52
9315 9662 2.659897 CCGCTCTGACATAGGCGC 60.660 66.667 0.00 0.00 41.60 6.53
9316 9663 2.104928 CGCTCTGACATAGGCGCA 59.895 61.111 10.83 0.00 38.55 6.09
9317 9664 1.300465 CGCTCTGACATAGGCGCAT 60.300 57.895 10.83 3.98 38.55 4.73
9318 9665 1.554891 CGCTCTGACATAGGCGCATG 61.555 60.000 10.83 8.11 38.55 4.06
9319 9666 1.226686 GCTCTGACATAGGCGCATGG 61.227 60.000 10.83 1.06 0.00 3.66
9320 9667 0.390492 CTCTGACATAGGCGCATGGA 59.610 55.000 10.83 0.00 0.00 3.41
9321 9668 0.104855 TCTGACATAGGCGCATGGAC 59.895 55.000 10.83 5.10 0.00 4.02
9322 9669 1.217585 CTGACATAGGCGCATGGACG 61.218 60.000 10.83 0.00 0.00 4.79
9343 9690 3.917760 GTCGCCGGAGATCCCCTG 61.918 72.222 12.23 0.00 0.00 4.45
9346 9693 3.483869 GCCGGAGATCCCCTGCTT 61.484 66.667 5.05 0.00 34.19 3.91
9347 9694 2.825264 CCGGAGATCCCCTGCTTC 59.175 66.667 0.00 0.00 0.00 3.86
9348 9695 2.419198 CGGAGATCCCCTGCTTCG 59.581 66.667 0.00 0.00 0.00 3.79
9349 9696 2.110006 GGAGATCCCCTGCTTCGC 59.890 66.667 0.00 0.00 0.00 4.70
9350 9697 2.279784 GAGATCCCCTGCTTCGCG 60.280 66.667 0.00 0.00 0.00 5.87
9351 9698 4.537433 AGATCCCCTGCTTCGCGC 62.537 66.667 0.00 0.00 39.77 6.86
9352 9699 4.537433 GATCCCCTGCTTCGCGCT 62.537 66.667 5.56 0.00 40.11 5.92
9353 9700 3.151958 GATCCCCTGCTTCGCGCTA 62.152 63.158 5.56 0.00 40.11 4.26
9354 9701 3.447025 ATCCCCTGCTTCGCGCTAC 62.447 63.158 5.56 0.00 40.11 3.58
9355 9702 4.148825 CCCCTGCTTCGCGCTACT 62.149 66.667 5.56 0.00 40.11 2.57
9356 9703 2.583593 CCCTGCTTCGCGCTACTC 60.584 66.667 5.56 0.00 40.11 2.59
9357 9704 2.583593 CCTGCTTCGCGCTACTCC 60.584 66.667 5.56 0.00 40.11 3.85
9358 9705 2.583593 CTGCTTCGCGCTACTCCC 60.584 66.667 5.56 0.00 40.11 4.30
9359 9706 4.143333 TGCTTCGCGCTACTCCCC 62.143 66.667 5.56 0.00 40.11 4.81
9360 9707 3.839432 GCTTCGCGCTACTCCCCT 61.839 66.667 5.56 0.00 35.14 4.79
9361 9708 2.105128 CTTCGCGCTACTCCCCTG 59.895 66.667 5.56 0.00 0.00 4.45
9362 9709 4.143333 TTCGCGCTACTCCCCTGC 62.143 66.667 5.56 0.00 0.00 4.85
9364 9711 4.577246 CGCGCTACTCCCCTGCTC 62.577 72.222 5.56 0.00 0.00 4.26
9365 9712 3.151022 GCGCTACTCCCCTGCTCT 61.151 66.667 0.00 0.00 0.00 4.09
9366 9713 3.124686 CGCTACTCCCCTGCTCTC 58.875 66.667 0.00 0.00 0.00 3.20
9367 9714 2.494530 CGCTACTCCCCTGCTCTCC 61.495 68.421 0.00 0.00 0.00 3.71
9368 9715 2.137528 GCTACTCCCCTGCTCTCCC 61.138 68.421 0.00 0.00 0.00 4.30
9369 9716 1.830408 CTACTCCCCTGCTCTCCCG 60.830 68.421 0.00 0.00 0.00 5.14
9411 9758 4.521062 CTCCGCCGCTCCCTTCTG 62.521 72.222 0.00 0.00 0.00 3.02
9415 9762 4.847444 GCCGCTCCCTTCTGCCTC 62.847 72.222 0.00 0.00 0.00 4.70
9416 9763 4.521062 CCGCTCCCTTCTGCCTCG 62.521 72.222 0.00 0.00 0.00 4.63
9442 9789 4.437587 CCCAGCCTCCCTTGCCTG 62.438 72.222 0.00 0.00 0.00 4.85
9446 9793 4.811364 GCCTCCCTTGCCTGCCTC 62.811 72.222 0.00 0.00 0.00 4.70
9447 9794 4.120755 CCTCCCTTGCCTGCCTCC 62.121 72.222 0.00 0.00 0.00 4.30
9448 9795 4.120755 CTCCCTTGCCTGCCTCCC 62.121 72.222 0.00 0.00 0.00 4.30
9451 9798 4.033776 CCTTGCCTGCCTCCCGAA 62.034 66.667 0.00 0.00 0.00 4.30
9452 9799 2.273449 CTTGCCTGCCTCCCGAAT 59.727 61.111 0.00 0.00 0.00 3.34
9453 9800 1.821332 CTTGCCTGCCTCCCGAATC 60.821 63.158 0.00 0.00 0.00 2.52
9454 9801 2.262774 CTTGCCTGCCTCCCGAATCT 62.263 60.000 0.00 0.00 0.00 2.40
9455 9802 1.852157 TTGCCTGCCTCCCGAATCTT 61.852 55.000 0.00 0.00 0.00 2.40
9456 9803 1.524849 GCCTGCCTCCCGAATCTTC 60.525 63.158 0.00 0.00 0.00 2.87
9457 9804 1.147153 CCTGCCTCCCGAATCTTCC 59.853 63.158 0.00 0.00 0.00 3.46
9458 9805 1.147153 CTGCCTCCCGAATCTTCCC 59.853 63.158 0.00 0.00 0.00 3.97
9459 9806 1.306997 TGCCTCCCGAATCTTCCCT 60.307 57.895 0.00 0.00 0.00 4.20
9460 9807 1.338136 TGCCTCCCGAATCTTCCCTC 61.338 60.000 0.00 0.00 0.00 4.30
9461 9808 1.051556 GCCTCCCGAATCTTCCCTCT 61.052 60.000 0.00 0.00 0.00 3.69
9462 9809 1.501582 CCTCCCGAATCTTCCCTCTT 58.498 55.000 0.00 0.00 0.00 2.85
9463 9810 1.840635 CCTCCCGAATCTTCCCTCTTT 59.159 52.381 0.00 0.00 0.00 2.52
9464 9811 2.239907 CCTCCCGAATCTTCCCTCTTTT 59.760 50.000 0.00 0.00 0.00 2.27
9465 9812 3.454812 CCTCCCGAATCTTCCCTCTTTTA 59.545 47.826 0.00 0.00 0.00 1.52
9466 9813 4.443621 CTCCCGAATCTTCCCTCTTTTAC 58.556 47.826 0.00 0.00 0.00 2.01
9467 9814 3.199289 TCCCGAATCTTCCCTCTTTTACC 59.801 47.826 0.00 0.00 0.00 2.85
9468 9815 3.542648 CCGAATCTTCCCTCTTTTACCC 58.457 50.000 0.00 0.00 0.00 3.69
9469 9816 3.054655 CCGAATCTTCCCTCTTTTACCCA 60.055 47.826 0.00 0.00 0.00 4.51
9470 9817 4.566907 CCGAATCTTCCCTCTTTTACCCAA 60.567 45.833 0.00 0.00 0.00 4.12
9471 9818 5.007682 CGAATCTTCCCTCTTTTACCCAAA 58.992 41.667 0.00 0.00 0.00 3.28
9472 9819 5.475564 CGAATCTTCCCTCTTTTACCCAAAA 59.524 40.000 0.00 0.00 32.73 2.44
9473 9820 6.015772 CGAATCTTCCCTCTTTTACCCAAAAA 60.016 38.462 0.00 0.00 33.33 1.94
9493 9840 5.453567 AAAATTGTTTCTTCTTCCTCCCG 57.546 39.130 0.00 0.00 0.00 5.14
9494 9841 1.892209 TTGTTTCTTCTTCCTCCCGC 58.108 50.000 0.00 0.00 0.00 6.13
9495 9842 0.036306 TGTTTCTTCTTCCTCCCGCC 59.964 55.000 0.00 0.00 0.00 6.13
9496 9843 1.019805 GTTTCTTCTTCCTCCCGCCG 61.020 60.000 0.00 0.00 0.00 6.46
9497 9844 2.798148 TTTCTTCTTCCTCCCGCCGC 62.798 60.000 0.00 0.00 0.00 6.53
9528 9875 4.103928 GGCCACCCCTCCCTCCTA 62.104 72.222 0.00 0.00 0.00 2.94
9529 9876 2.446802 GCCACCCCTCCCTCCTAG 60.447 72.222 0.00 0.00 0.00 3.02
9530 9877 2.446802 CCACCCCTCCCTCCTAGC 60.447 72.222 0.00 0.00 0.00 3.42
9531 9878 2.840102 CACCCCTCCCTCCTAGCG 60.840 72.222 0.00 0.00 0.00 4.26
9532 9879 3.357082 ACCCCTCCCTCCTAGCGT 61.357 66.667 0.00 0.00 0.00 5.07
9533 9880 2.041819 CCCCTCCCTCCTAGCGTT 60.042 66.667 0.00 0.00 0.00 4.84
9534 9881 2.435693 CCCCTCCCTCCTAGCGTTG 61.436 68.421 0.00 0.00 0.00 4.10
9535 9882 1.381327 CCCTCCCTCCTAGCGTTGA 60.381 63.158 0.00 0.00 0.00 3.18
9536 9883 0.760945 CCCTCCCTCCTAGCGTTGAT 60.761 60.000 0.00 0.00 0.00 2.57
9537 9884 0.390860 CCTCCCTCCTAGCGTTGATG 59.609 60.000 0.00 0.00 0.00 3.07
9538 9885 0.390860 CTCCCTCCTAGCGTTGATGG 59.609 60.000 0.00 0.00 0.00 3.51
9539 9886 0.032515 TCCCTCCTAGCGTTGATGGA 60.033 55.000 0.00 0.00 0.00 3.41
9540 9887 0.830648 CCCTCCTAGCGTTGATGGAA 59.169 55.000 0.00 0.00 0.00 3.53
9541 9888 1.202580 CCCTCCTAGCGTTGATGGAAG 60.203 57.143 0.00 0.00 0.00 3.46
9542 9889 1.757118 CCTCCTAGCGTTGATGGAAGA 59.243 52.381 0.00 0.00 0.00 2.87
9543 9890 2.168521 CCTCCTAGCGTTGATGGAAGAA 59.831 50.000 0.00 0.00 0.00 2.52
9544 9891 3.452474 CTCCTAGCGTTGATGGAAGAAG 58.548 50.000 0.00 0.00 0.00 2.85
9545 9892 1.936547 CCTAGCGTTGATGGAAGAAGC 59.063 52.381 0.00 0.00 0.00 3.86
9546 9893 2.621338 CTAGCGTTGATGGAAGAAGCA 58.379 47.619 0.00 0.00 0.00 3.91
9547 9894 2.119801 AGCGTTGATGGAAGAAGCAT 57.880 45.000 0.00 0.00 0.00 3.79
9548 9895 1.741706 AGCGTTGATGGAAGAAGCATG 59.258 47.619 0.00 0.00 0.00 4.06
9549 9896 1.202222 GCGTTGATGGAAGAAGCATGG 60.202 52.381 0.00 0.00 0.00 3.66
9550 9897 1.202222 CGTTGATGGAAGAAGCATGGC 60.202 52.381 0.00 0.00 0.00 4.40
9551 9898 1.135721 GTTGATGGAAGAAGCATGGCC 59.864 52.381 0.00 0.00 0.00 5.36
9552 9899 0.749091 TGATGGAAGAAGCATGGCCG 60.749 55.000 0.00 0.00 0.00 6.13
9553 9900 1.450531 GATGGAAGAAGCATGGCCGG 61.451 60.000 0.00 0.00 0.00 6.13
9554 9901 3.521796 GGAAGAAGCATGGCCGGC 61.522 66.667 21.18 21.18 0.00 6.13
9555 9902 3.521796 GAAGAAGCATGGCCGGCC 61.522 66.667 39.40 39.40 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 72 3.008049 ACTGTTTGAGACATGTCCCCTAC 59.992 47.826 22.21 15.18 37.69 3.18
89 91 9.520204 AACAAGAAAATATGTGAACTCAAACTG 57.480 29.630 0.00 0.00 0.00 3.16
92 94 9.515020 GTCAACAAGAAAATATGTGAACTCAAA 57.485 29.630 0.00 0.00 0.00 2.69
129 132 7.613801 ACCTGATATAAACCTGCAAAATGTGTA 59.386 33.333 0.00 0.00 0.00 2.90
130 133 6.437162 ACCTGATATAAACCTGCAAAATGTGT 59.563 34.615 0.00 0.00 0.00 3.72
239 243 3.974912 TGTAATGTTGGTTGTGTGCATG 58.025 40.909 0.00 0.00 0.00 4.06
266 270 1.865865 TCGTGAGAGCGCTTCTTTTT 58.134 45.000 13.26 0.00 35.87 1.94
267 271 3.588277 TCGTGAGAGCGCTTCTTTT 57.412 47.368 13.26 0.00 35.87 2.27
321 325 0.331616 TCCTCCCTCGTGATCAGTGA 59.668 55.000 0.00 0.00 0.00 3.41
408 415 1.069227 GTTTCGTGCGAGCCAAGATTT 60.069 47.619 0.00 0.00 32.00 2.17
529 536 1.584380 GCGTGGAGTCCTACGAGTGT 61.584 60.000 27.49 0.00 42.54 3.55
647 654 3.314693 ACGGAGGAGAGAGAGAGAGTAT 58.685 50.000 0.00 0.00 0.00 2.12
649 656 1.485066 GACGGAGGAGAGAGAGAGAGT 59.515 57.143 0.00 0.00 0.00 3.24
650 657 1.202651 GGACGGAGGAGAGAGAGAGAG 60.203 61.905 0.00 0.00 0.00 3.20
841 848 2.178890 CCTAGAGACGGACGGACGG 61.179 68.421 6.00 0.00 38.39 4.79
888 895 0.474614 AGATCGGGATCTCTCGGACA 59.525 55.000 5.36 0.00 44.37 4.02
1059 1067 1.139095 GGAGAGGAAATCGCGTCGT 59.861 57.895 5.77 0.00 0.00 4.34
1279 1290 2.286872 CTAGAAATGCACTCTGCCTGG 58.713 52.381 9.86 0.00 44.23 4.45
1325 1336 1.006832 CTGGATTGCTTAACCGTCGG 58.993 55.000 10.48 10.48 0.00 4.79
1486 1497 4.092091 CAGATAACTGACTTTCTGCCGTTC 59.908 45.833 0.00 0.00 46.03 3.95
1569 1581 6.867662 AGGTTCACTGACTGAATTAACAAG 57.132 37.500 0.00 0.00 41.10 3.16
1594 1606 6.327279 ACATACTCGGTCGAATCATTCATA 57.673 37.500 0.00 0.00 0.00 2.15
1607 1619 7.734924 TCGATACACTAAATACATACTCGGT 57.265 36.000 0.00 0.00 0.00 4.69
1609 1621 8.998558 TGTTCGATACACTAAATACATACTCG 57.001 34.615 0.00 0.00 0.00 4.18
1694 1706 0.826715 GGCACTCCTGTCTGCTGATA 59.173 55.000 0.00 0.00 33.63 2.15
2021 2054 9.872721 AATCAAAACATTTTTCAAGGCAAATTT 57.127 22.222 0.00 0.00 0.00 1.82
2059 2092 7.095397 CCACTACAAATCTGACGTCAAATTGTA 60.095 37.037 29.25 29.25 32.25 2.41
2159 2192 6.763610 CCATCTATGGGAAGAGAACTACAAAC 59.236 42.308 0.67 0.00 44.31 2.93
2256 2289 6.146184 CGTTAACCTGATTATGTGAGGCATAG 59.854 42.308 0.00 0.00 40.74 2.23
2372 2405 2.092699 GCCAGATTTCCTTGTAGGAGCT 60.093 50.000 0.00 0.00 46.73 4.09
2623 2657 6.537660 CACTGAATGAGTAGCATCAAATCTCA 59.462 38.462 0.00 0.00 35.78 3.27
2629 2663 5.798132 AGAACACTGAATGAGTAGCATCAA 58.202 37.500 0.00 0.00 35.78 2.57
2762 2796 5.533112 TCCTTCTTGGGAGATAGAAGTGAT 58.467 41.667 10.06 0.00 43.68 3.06
2906 2940 2.725312 GCCAGATGCTGAGGACGGA 61.725 63.158 0.00 0.00 36.87 4.69
3071 3105 9.410556 CCAAGCCATATAAAGTAATTATTGTGC 57.589 33.333 0.00 0.00 35.77 4.57
3079 3113 4.725490 ACGCCCAAGCCATATAAAGTAAT 58.275 39.130 0.00 0.00 34.57 1.89
3214 3251 4.511454 CCTCGTTGACTGTTTGATTCAGAA 59.489 41.667 0.00 0.00 36.81 3.02
3264 3301 8.902806 CAGTAAGAAGTCATGGCCATATAAAAA 58.097 33.333 20.30 0.00 0.00 1.94
3432 3477 7.554476 GGCTGAACTGTAAGGAGAAATTATCTT 59.446 37.037 0.00 0.00 39.30 2.40
3447 3493 7.038587 TGACCTAGAATAAAAGGCTGAACTGTA 60.039 37.037 0.00 0.00 36.24 2.74
3530 3576 1.995626 GCAGGTAGGCTCTTCCCCA 60.996 63.158 0.00 0.00 34.51 4.96
3577 3623 3.767673 AGCAAGACGGTAAGGACATAAGA 59.232 43.478 0.00 0.00 0.00 2.10
3580 3626 2.829720 ACAGCAAGACGGTAAGGACATA 59.170 45.455 0.00 0.00 0.00 2.29
3718 3765 0.681887 TTCCATCATGTGCCTGCTGG 60.682 55.000 5.03 5.03 34.43 4.85
3762 3809 1.749634 GCTGCTGAGCTTCATTTGGAT 59.250 47.619 5.83 0.00 42.52 3.41
3783 3830 3.700863 AGTTAGGAGGGTATGGCTGTA 57.299 47.619 0.00 0.00 0.00 2.74
3816 3863 1.202114 GCCATGAATCAAACTGCGGAA 59.798 47.619 0.00 0.00 0.00 4.30
4135 4182 9.381033 CTTACATTGGCATTATTGAAATTTGGA 57.619 29.630 0.00 0.00 0.00 3.53
4175 4222 1.153349 GTTGATGAGGGCCTCCGAC 60.153 63.158 30.03 20.40 38.33 4.79
4177 4224 2.190578 GGTTGATGAGGGCCTCCG 59.809 66.667 30.03 0.00 38.33 4.63
4324 4371 5.076182 TCATGCAAAATCCTAGTTTGTCCA 58.924 37.500 0.00 0.00 38.09 4.02
4476 4523 5.263599 TCATAAGCACCATGTTCCTTTCAT 58.736 37.500 0.00 0.00 0.00 2.57
4543 4590 5.702209 GGAATGTGCATTTTCCAAAACAGAT 59.298 36.000 20.07 0.00 40.93 2.90
4575 4622 0.749454 GGCGCCATCATCAGTTTCCT 60.749 55.000 24.80 0.00 0.00 3.36
4776 4823 2.151202 TCACCCGATCTGCTTTTGAAC 58.849 47.619 0.00 0.00 0.00 3.18
4825 4872 4.427312 CAGAAACAGAAGCAAAAGCAGTT 58.573 39.130 0.00 0.00 0.00 3.16
4842 4889 1.980232 CATGCTGCCTGGCCAGAAA 60.980 57.895 34.91 19.82 34.77 2.52
4879 4926 1.159713 TCTGCAGTTTCTGTGCCACG 61.160 55.000 14.67 0.00 40.43 4.94
4884 4931 4.070716 AGATTCCTTCTGCAGTTTCTGTG 58.929 43.478 14.67 0.00 33.43 3.66
4902 4949 3.620488 ACAACACCGCCATCATTAGATT 58.380 40.909 0.00 0.00 30.20 2.40
4904 4951 2.746904 CAACAACACCGCCATCATTAGA 59.253 45.455 0.00 0.00 0.00 2.10
4918 4965 2.093606 TGAGTGTAACGGTCCAACAACA 60.094 45.455 0.00 0.00 45.86 3.33
4931 4978 4.261572 GGCTTCAGCAAAATGTGAGTGTAA 60.262 41.667 0.30 0.00 44.36 2.41
4961 5008 2.790433 TGATACACCCAACTTTCCAGC 58.210 47.619 0.00 0.00 0.00 4.85
4970 5017 4.441792 CGATCATGAGTTGATACACCCAA 58.558 43.478 0.09 0.00 45.29 4.12
5035 5082 1.098050 GTGGCATGTCTTTAGCAGGG 58.902 55.000 0.00 0.00 0.00 4.45
5063 5110 2.063979 CCCGCCCATGTCCTGTAGA 61.064 63.158 0.00 0.00 0.00 2.59
5148 5195 2.034879 ACCTGCGAAACATGCTCCG 61.035 57.895 0.00 0.00 0.00 4.63
5165 5212 1.660560 GGCATGTCATCAGGTGGCAC 61.661 60.000 9.70 9.70 46.91 5.01
5179 5226 1.033746 AATCGGGTGAAGCTGGCATG 61.034 55.000 0.00 0.00 0.00 4.06
5232 5279 7.203255 ACTCTTCCACTGTAAAAAGTATTGC 57.797 36.000 0.00 0.00 0.00 3.56
5312 5359 7.068955 GGTTTTTCTTGCACAAATATTTTCCG 58.931 34.615 0.00 0.00 0.00 4.30
5336 5383 9.829507 TGGCTACATGAAAATAATTTTATTGGG 57.170 29.630 0.00 0.00 33.85 4.12
5390 5437 2.035632 AGCTCCCTCCTAGAAACGATG 58.964 52.381 0.00 0.00 0.00 3.84
5393 5440 2.657143 AGTAGCTCCCTCCTAGAAACG 58.343 52.381 0.00 0.00 0.00 3.60
5442 5527 9.573166 CCCTCATACTTTTAATGGATATGTGAA 57.427 33.333 0.00 0.00 0.00 3.18
5464 5549 5.409826 GCAGTAATGAACTATACATGCCCTC 59.590 44.000 0.00 0.00 35.76 4.30
5470 5555 6.201044 GCGAAGTGCAGTAATGAACTATACAT 59.799 38.462 3.78 0.00 45.45 2.29
5514 5599 3.815401 AGCAAAACATCTACCAGTCACAC 59.185 43.478 0.00 0.00 0.00 3.82
5535 5620 6.624423 AGGCTAACAAATTGTGCTAATGAAG 58.376 36.000 0.00 0.00 0.00 3.02
5542 5627 2.299867 CCCAAGGCTAACAAATTGTGCT 59.700 45.455 0.00 0.00 0.00 4.40
5575 5660 0.390860 AGCCTGAGTCTGTGACACAC 59.609 55.000 3.56 0.00 34.60 3.82
5584 5669 3.998099 GCTTTCAAAAAGCCTGAGTCT 57.002 42.857 12.32 0.00 37.30 3.24
5653 5738 6.889301 ATATGAATTGACTAATGCAGGGTG 57.111 37.500 0.00 0.00 35.32 4.61
5662 5747 9.176460 TGCACTTGATGAATATGAATTGACTAA 57.824 29.630 0.00 0.00 0.00 2.24
5672 5757 8.468720 TGTTTGAAATGCACTTGATGAATATG 57.531 30.769 0.00 0.00 0.00 1.78
5693 5778 2.900547 AGCAAACCACAGGCTGTTT 58.099 47.368 19.43 8.21 36.34 2.83
5721 5806 7.817962 AGATACGGCAATGTATTATGGACTAAC 59.182 37.037 0.00 0.00 35.24 2.34
5814 5899 7.704899 ACAGCAACAATCCTTACTTAACAAAAC 59.295 33.333 0.00 0.00 0.00 2.43
5886 5971 7.745015 TCGAAATTTTAGATAAAACCTGACCG 58.255 34.615 0.05 0.00 37.92 4.79
5934 6019 8.340443 CGTAACCAAATATAAGAGGTTTTAGGC 58.660 37.037 10.23 0.00 41.33 3.93
5986 6234 3.936457 TGCACAGCAGCATATGGTACAAT 60.936 43.478 7.18 0.00 40.67 2.71
6032 6280 4.141482 GCAAGGGTATGAAAGGATGGTAGA 60.141 45.833 0.00 0.00 0.00 2.59
6035 6283 2.311542 TGCAAGGGTATGAAAGGATGGT 59.688 45.455 0.00 0.00 0.00 3.55
6041 6289 8.638685 CATTAAAGAATGCAAGGGTATGAAAG 57.361 34.615 0.00 0.00 36.29 2.62
6179 6524 7.443259 TGCACAGGTTATTAAGAAAGTTACC 57.557 36.000 0.00 0.00 0.00 2.85
6182 6527 8.860088 AGAATTGCACAGGTTATTAAGAAAGTT 58.140 29.630 0.00 0.00 0.00 2.66
6218 6563 6.349611 GGCTTGGTATTATTGGCATCAGTATG 60.350 42.308 0.00 0.00 36.09 2.39
6219 6564 5.711976 GGCTTGGTATTATTGGCATCAGTAT 59.288 40.000 0.00 0.00 0.00 2.12
6220 6565 5.070001 GGCTTGGTATTATTGGCATCAGTA 58.930 41.667 0.00 0.00 0.00 2.74
6221 6566 3.891366 GGCTTGGTATTATTGGCATCAGT 59.109 43.478 0.00 0.00 0.00 3.41
6222 6567 4.147321 AGGCTTGGTATTATTGGCATCAG 58.853 43.478 0.00 0.00 0.00 2.90
6223 6568 4.183223 AGGCTTGGTATTATTGGCATCA 57.817 40.909 0.00 0.00 0.00 3.07
6224 6569 4.342092 ACAAGGCTTGGTATTATTGGCATC 59.658 41.667 29.26 0.00 34.12 3.91
6225 6570 4.289245 ACAAGGCTTGGTATTATTGGCAT 58.711 39.130 29.26 2.32 34.12 4.40
6226 6571 3.707316 ACAAGGCTTGGTATTATTGGCA 58.293 40.909 29.26 0.00 34.12 4.92
6227 6572 4.432712 CAACAAGGCTTGGTATTATTGGC 58.567 43.478 29.26 0.00 34.12 4.52
6228 6573 4.432712 GCAACAAGGCTTGGTATTATTGG 58.567 43.478 29.26 11.71 34.12 3.16
6229 6574 4.432712 GGCAACAAGGCTTGGTATTATTG 58.567 43.478 29.26 22.40 40.24 1.90
6230 6575 4.736126 GGCAACAAGGCTTGGTATTATT 57.264 40.909 29.26 11.92 40.24 1.40
6241 6586 3.146847 ACAAGTTAGTAGGCAACAAGGC 58.853 45.455 0.00 0.00 44.61 4.35
6260 6605 5.635417 TGGAAATGCAACGATCAAATACA 57.365 34.783 0.00 0.00 0.00 2.29
6270 6615 1.650153 CGCTGAATTGGAAATGCAACG 59.350 47.619 0.00 0.00 0.00 4.10
6282 6627 4.764823 TCCCTCATTTTTACACGCTGAATT 59.235 37.500 0.00 0.00 0.00 2.17
6321 6666 0.509499 CAGCTTGCAATTGTTTGGCG 59.491 50.000 7.40 1.24 33.22 5.69
6427 6772 1.710244 TGGTGGTGGATCACTGGAATT 59.290 47.619 0.00 0.00 37.75 2.17
6473 6818 1.180029 CCCATCAACTCCAGCCTTTG 58.820 55.000 0.00 0.00 0.00 2.77
6494 6839 4.153117 CAGTTGAAGATGCAGGTTCAGTAC 59.847 45.833 12.02 9.46 34.25 2.73
6570 6915 4.019174 CTGCAGTATCCTTGGGTTCATTT 58.981 43.478 5.25 0.00 0.00 2.32
6624 6969 2.185387 TCTTTACCTGTACCCTCAGCC 58.815 52.381 0.00 0.00 34.47 4.85
6647 6992 5.690865 AGGTTGAAGTGTTATGACCAGAAA 58.309 37.500 0.00 0.00 0.00 2.52
6698 7043 5.582950 ACTTTTATGGGCTATATGCTCCA 57.417 39.130 0.00 0.00 42.79 3.86
6711 7056 9.546428 TCATGTGACTGTGATATACTTTTATGG 57.454 33.333 0.00 0.00 0.00 2.74
6728 7073 5.728637 TGTAACACTGAGATCATGTGACT 57.271 39.130 16.08 7.89 35.83 3.41
6739 7084 3.003480 GCCTAGGCTTTGTAACACTGAG 58.997 50.000 27.17 0.00 38.26 3.35
6766 7111 4.340666 TGAAACAGCATGCCTTTTTCTGTA 59.659 37.500 25.07 11.52 42.53 2.74
6813 7158 2.942376 TGTGTTTACTGCCACACTTGAG 59.058 45.455 4.23 0.00 43.24 3.02
6997 7342 0.242017 GGTGCATTCTGCTGACCAAC 59.758 55.000 0.00 0.00 45.31 3.77
7012 7357 0.321919 TCACTGGAGATGCTTGGTGC 60.322 55.000 0.00 0.00 43.25 5.01
7092 7437 5.935789 GGTTATACTTCCAACTGTAAGCACA 59.064 40.000 0.00 0.00 37.60 4.57
7101 7446 2.908351 ACCCACGGTTATACTTCCAACT 59.092 45.455 0.00 0.00 27.29 3.16
7360 7705 1.047801 GTGGTGCCCTTTCCAATTGT 58.952 50.000 4.43 0.00 35.38 2.71
7468 7813 9.810545 TTTTTCTACAGGTAAATTTTGTTCCAG 57.189 29.630 0.00 0.00 0.00 3.86
7580 7925 2.725221 ATGAGACTTTCCATGCCCTC 57.275 50.000 0.00 0.00 0.00 4.30
7590 7935 2.485814 GCGCCAAGAAGAATGAGACTTT 59.514 45.455 0.00 0.00 0.00 2.66
7740 8085 2.002586 CTATTCCCGGCAGCATAATCG 58.997 52.381 0.00 0.00 0.00 3.34
7819 8164 0.771127 TGCCTCCTTTGCCTGTTAGT 59.229 50.000 0.00 0.00 0.00 2.24
7926 8271 3.129988 CAGAAGAGTTTGCATCCATTCCC 59.870 47.826 0.00 0.00 0.00 3.97
7965 8310 2.289694 GCTGCTCTTCACCTCAGGTTTA 60.290 50.000 0.00 0.00 31.02 2.01
7991 8336 2.820197 TGTGCTCTAGAGTGTGTACCAG 59.180 50.000 20.75 0.00 0.00 4.00
7992 8337 2.557056 GTGTGCTCTAGAGTGTGTACCA 59.443 50.000 20.75 5.80 0.00 3.25
7993 8338 2.820787 AGTGTGCTCTAGAGTGTGTACC 59.179 50.000 20.75 3.17 0.00 3.34
7994 8339 3.366476 CCAGTGTGCTCTAGAGTGTGTAC 60.366 52.174 20.75 12.51 0.00 2.90
7995 8340 2.820197 CCAGTGTGCTCTAGAGTGTGTA 59.180 50.000 20.75 1.47 0.00 2.90
7996 8341 1.615883 CCAGTGTGCTCTAGAGTGTGT 59.384 52.381 20.75 0.21 0.00 3.72
8042 8387 5.296035 GTGGTATTATTGCCCTGTGAGTTAC 59.704 44.000 0.00 0.00 0.00 2.50
8111 8456 9.263446 TGTCACCTTTACCTTGATTACTACTAT 57.737 33.333 0.00 0.00 0.00 2.12
8114 8459 8.038944 TCATGTCACCTTTACCTTGATTACTAC 58.961 37.037 0.00 0.00 0.00 2.73
8175 8520 1.334054 GCTGCTGTTCTGCATTTTCG 58.666 50.000 4.97 0.00 42.48 3.46
8430 8775 3.760035 CCGCGCTCCCTGTACACT 61.760 66.667 5.56 0.00 0.00 3.55
8469 8814 0.182537 TGACAAAGTGACCACCAGGG 59.817 55.000 0.00 0.00 44.81 4.45
8526 8871 3.454858 AGAATTAGGAACTGGAGCTGGA 58.545 45.455 0.00 0.00 41.52 3.86
8529 8874 4.141914 CGGTAAGAATTAGGAACTGGAGCT 60.142 45.833 0.00 0.00 41.52 4.09
8585 8930 4.142665 TGACTCGACGTTCCTAAATCTCAG 60.143 45.833 0.00 0.00 0.00 3.35
8599 8944 1.721389 CCTGTTGTGAATGACTCGACG 59.279 52.381 0.00 0.00 31.30 5.12
8641 8986 7.108841 CCTGTACAGGCAGTAAACTAGAATA 57.891 40.000 28.48 0.00 42.44 1.75
8751 9096 3.512154 TACTGGTGACCCCGACCGT 62.512 63.158 0.00 0.00 36.12 4.83
8800 9147 0.676782 ATCACACGCTAAGGCCCAAC 60.677 55.000 0.00 0.00 34.44 3.77
8833 9180 2.162681 CCGAAGCAAGGGATGTTCTTT 58.837 47.619 0.00 0.00 0.00 2.52
8837 9184 0.400213 TCACCGAAGCAAGGGATGTT 59.600 50.000 0.00 0.00 0.00 2.71
8903 9250 4.612712 GCAAACACTACTAGCATTTTCGCA 60.613 41.667 0.00 0.00 0.00 5.10
8955 9302 9.499479 TGTACCGAATACCAACAAATAAGTAAA 57.501 29.630 0.00 0.00 32.16 2.01
8956 9303 9.669887 ATGTACCGAATACCAACAAATAAGTAA 57.330 29.630 0.00 0.00 32.16 2.24
8997 9344 2.160615 CAGTCAACGGAAACACAACACA 59.839 45.455 0.00 0.00 0.00 3.72
8998 9345 2.477189 CCAGTCAACGGAAACACAACAC 60.477 50.000 0.00 0.00 0.00 3.32
9028 9375 9.403110 CAAAAGAAGTCAATTATTCCTGACAAG 57.597 33.333 5.13 0.00 43.64 3.16
9067 9414 1.873863 GTACAAGGGCCTTCGTTGC 59.126 57.895 17.86 10.59 42.98 4.17
9157 9504 2.171870 AGGACAACTTTTCCAAGACGGA 59.828 45.455 0.00 0.00 44.40 4.69
9158 9505 2.548480 GAGGACAACTTTTCCAAGACGG 59.452 50.000 0.00 0.00 35.33 4.79
9159 9506 3.202906 TGAGGACAACTTTTCCAAGACG 58.797 45.455 0.00 0.00 35.33 4.18
9160 9507 4.022849 CCATGAGGACAACTTTTCCAAGAC 60.023 45.833 0.00 0.00 36.89 3.01
9161 9508 4.144297 CCATGAGGACAACTTTTCCAAGA 58.856 43.478 0.00 0.00 36.89 3.02
9162 9509 3.891366 ACCATGAGGACAACTTTTCCAAG 59.109 43.478 0.00 0.00 38.69 3.61
9163 9510 3.888930 GACCATGAGGACAACTTTTCCAA 59.111 43.478 0.00 0.00 38.69 3.53
9164 9511 3.117701 TGACCATGAGGACAACTTTTCCA 60.118 43.478 0.00 0.00 36.64 3.53
9165 9512 3.486383 TGACCATGAGGACAACTTTTCC 58.514 45.455 0.00 0.00 36.64 3.13
9166 9513 5.712152 AATGACCATGAGGACAACTTTTC 57.288 39.130 0.00 0.00 42.66 2.29
9167 9514 6.484364 AAAATGACCATGAGGACAACTTTT 57.516 33.333 0.00 0.00 42.66 2.27
9168 9515 6.549364 TGTAAAATGACCATGAGGACAACTTT 59.451 34.615 0.00 0.00 42.66 2.66
9169 9516 6.068010 TGTAAAATGACCATGAGGACAACTT 58.932 36.000 0.00 0.00 42.66 2.66
9170 9517 5.630121 TGTAAAATGACCATGAGGACAACT 58.370 37.500 0.00 0.00 42.66 3.16
9171 9518 5.705441 TCTGTAAAATGACCATGAGGACAAC 59.295 40.000 0.00 0.00 42.66 3.32
9172 9519 5.875224 TCTGTAAAATGACCATGAGGACAA 58.125 37.500 0.00 0.00 42.66 3.18
9173 9520 5.497464 TCTGTAAAATGACCATGAGGACA 57.503 39.130 0.00 0.00 43.51 4.02
9174 9521 6.206634 TGTTTCTGTAAAATGACCATGAGGAC 59.793 38.462 0.00 0.00 38.69 3.85
9175 9522 6.206634 GTGTTTCTGTAAAATGACCATGAGGA 59.793 38.462 0.00 0.00 38.69 3.71
9176 9523 6.381801 GTGTTTCTGTAAAATGACCATGAGG 58.618 40.000 0.00 0.00 42.21 3.86
9177 9524 6.381801 GGTGTTTCTGTAAAATGACCATGAG 58.618 40.000 0.00 0.00 0.00 2.90
9178 9525 5.242838 GGGTGTTTCTGTAAAATGACCATGA 59.757 40.000 0.00 0.00 0.00 3.07
9179 9526 5.243730 AGGGTGTTTCTGTAAAATGACCATG 59.756 40.000 0.00 0.00 0.00 3.66
9180 9527 5.393866 AGGGTGTTTCTGTAAAATGACCAT 58.606 37.500 0.00 0.00 0.00 3.55
9181 9528 4.798882 AGGGTGTTTCTGTAAAATGACCA 58.201 39.130 0.00 0.00 0.00 4.02
9182 9529 4.825085 TGAGGGTGTTTCTGTAAAATGACC 59.175 41.667 0.00 0.00 0.00 4.02
9183 9530 5.562890 GCTGAGGGTGTTTCTGTAAAATGAC 60.563 44.000 0.00 0.00 0.00 3.06
9184 9531 4.518970 GCTGAGGGTGTTTCTGTAAAATGA 59.481 41.667 0.00 0.00 0.00 2.57
9185 9532 4.520492 AGCTGAGGGTGTTTCTGTAAAATG 59.480 41.667 0.00 0.00 0.00 2.32
9186 9533 4.729868 AGCTGAGGGTGTTTCTGTAAAAT 58.270 39.130 0.00 0.00 0.00 1.82
9187 9534 4.164843 AGCTGAGGGTGTTTCTGTAAAA 57.835 40.909 0.00 0.00 0.00 1.52
9188 9535 3.857157 AGCTGAGGGTGTTTCTGTAAA 57.143 42.857 0.00 0.00 0.00 2.01
9189 9536 4.967084 TTAGCTGAGGGTGTTTCTGTAA 57.033 40.909 0.00 0.00 0.00 2.41
9190 9537 5.488341 GAATTAGCTGAGGGTGTTTCTGTA 58.512 41.667 0.00 0.00 0.00 2.74
9191 9538 4.327680 GAATTAGCTGAGGGTGTTTCTGT 58.672 43.478 0.00 0.00 0.00 3.41
9192 9539 3.691609 GGAATTAGCTGAGGGTGTTTCTG 59.308 47.826 0.00 0.00 0.00 3.02
9193 9540 3.308473 GGGAATTAGCTGAGGGTGTTTCT 60.308 47.826 0.00 0.00 0.00 2.52
9194 9541 3.017442 GGGAATTAGCTGAGGGTGTTTC 58.983 50.000 0.00 0.00 0.00 2.78
9195 9542 2.618045 CGGGAATTAGCTGAGGGTGTTT 60.618 50.000 0.00 0.00 0.00 2.83
9196 9543 1.065418 CGGGAATTAGCTGAGGGTGTT 60.065 52.381 0.00 0.00 0.00 3.32
9197 9544 0.541863 CGGGAATTAGCTGAGGGTGT 59.458 55.000 0.00 0.00 0.00 4.16
9198 9545 0.830648 TCGGGAATTAGCTGAGGGTG 59.169 55.000 0.00 0.00 0.00 4.61
9199 9546 0.831307 GTCGGGAATTAGCTGAGGGT 59.169 55.000 0.00 0.00 0.00 4.34
9200 9547 0.830648 TGTCGGGAATTAGCTGAGGG 59.169 55.000 0.00 0.00 0.00 4.30
9201 9548 1.207089 TGTGTCGGGAATTAGCTGAGG 59.793 52.381 0.00 0.00 0.00 3.86
9202 9549 2.544685 CTGTGTCGGGAATTAGCTGAG 58.455 52.381 0.00 0.00 0.00 3.35
9203 9550 1.405526 GCTGTGTCGGGAATTAGCTGA 60.406 52.381 0.00 0.00 0.00 4.26
9204 9551 1.009829 GCTGTGTCGGGAATTAGCTG 58.990 55.000 0.00 0.00 0.00 4.24
9205 9552 0.107654 GGCTGTGTCGGGAATTAGCT 60.108 55.000 0.00 0.00 0.00 3.32
9206 9553 1.095807 GGGCTGTGTCGGGAATTAGC 61.096 60.000 0.00 0.00 0.00 3.09
9207 9554 0.810031 CGGGCTGTGTCGGGAATTAG 60.810 60.000 0.00 0.00 0.00 1.73
9208 9555 1.219664 CGGGCTGTGTCGGGAATTA 59.780 57.895 0.00 0.00 0.00 1.40
9209 9556 2.046314 CGGGCTGTGTCGGGAATT 60.046 61.111 0.00 0.00 0.00 2.17
9210 9557 4.778143 GCGGGCTGTGTCGGGAAT 62.778 66.667 0.00 0.00 0.00 3.01
9216 9563 3.941657 GAGGAGTGCGGGCTGTGTC 62.942 68.421 0.00 0.00 0.00 3.67
9217 9564 4.008933 GAGGAGTGCGGGCTGTGT 62.009 66.667 0.00 0.00 0.00 3.72
9220 9567 4.803426 GACGAGGAGTGCGGGCTG 62.803 72.222 0.00 0.00 0.00 4.85
9222 9569 3.991536 GAAGACGAGGAGTGCGGGC 62.992 68.421 0.00 0.00 0.00 6.13
9223 9570 2.182030 GAAGACGAGGAGTGCGGG 59.818 66.667 0.00 0.00 0.00 6.13
9224 9571 1.137825 GAGAAGACGAGGAGTGCGG 59.862 63.158 0.00 0.00 0.00 5.69
9225 9572 1.137825 GGAGAAGACGAGGAGTGCG 59.862 63.158 0.00 0.00 0.00 5.34
9226 9573 1.137825 CGGAGAAGACGAGGAGTGC 59.862 63.158 0.00 0.00 0.00 4.40
9227 9574 0.961358 ACCGGAGAAGACGAGGAGTG 60.961 60.000 9.46 0.00 0.00 3.51
9228 9575 0.677414 GACCGGAGAAGACGAGGAGT 60.677 60.000 9.46 0.00 0.00 3.85
9229 9576 1.707239 CGACCGGAGAAGACGAGGAG 61.707 65.000 9.46 0.00 0.00 3.69
9230 9577 1.744368 CGACCGGAGAAGACGAGGA 60.744 63.158 9.46 0.00 0.00 3.71
9231 9578 1.744368 TCGACCGGAGAAGACGAGG 60.744 63.158 9.46 0.00 0.00 4.63
9232 9579 1.296755 TGTCGACCGGAGAAGACGAG 61.297 60.000 9.46 0.00 36.49 4.18
9233 9580 1.301953 TGTCGACCGGAGAAGACGA 60.302 57.895 9.46 6.49 36.49 4.20
9234 9581 1.154263 GTGTCGACCGGAGAAGACG 60.154 63.158 9.46 4.02 36.49 4.18
9235 9582 0.168568 GAGTGTCGACCGGAGAAGAC 59.831 60.000 9.46 12.19 0.00 3.01
9236 9583 0.959372 GGAGTGTCGACCGGAGAAGA 60.959 60.000 9.46 0.00 0.00 2.87
9237 9584 1.507174 GGAGTGTCGACCGGAGAAG 59.493 63.158 9.46 0.00 0.00 2.85
9238 9585 2.330372 CGGAGTGTCGACCGGAGAA 61.330 63.158 9.46 0.00 44.59 2.87
9239 9586 2.745100 CGGAGTGTCGACCGGAGA 60.745 66.667 9.46 3.94 44.59 3.71
9248 9595 3.749064 TCAGAGCGGCGGAGTGTC 61.749 66.667 9.78 0.00 0.00 3.67
9249 9596 4.057428 GTCAGAGCGGCGGAGTGT 62.057 66.667 9.78 0.00 0.00 3.55
9250 9597 2.004808 TATGTCAGAGCGGCGGAGTG 62.005 60.000 9.78 0.00 0.00 3.51
9251 9598 1.729470 CTATGTCAGAGCGGCGGAGT 61.729 60.000 9.78 0.00 0.00 3.85
9252 9599 1.007964 CTATGTCAGAGCGGCGGAG 60.008 63.158 9.78 0.00 0.00 4.63
9253 9600 2.490148 CCTATGTCAGAGCGGCGGA 61.490 63.158 9.78 0.00 0.00 5.54
9254 9601 2.028190 CCTATGTCAGAGCGGCGG 59.972 66.667 9.78 0.00 0.00 6.13
9255 9602 2.659897 GCCTATGTCAGAGCGGCG 60.660 66.667 0.51 0.51 0.00 6.46
9256 9603 2.659897 CGCCTATGTCAGAGCGGC 60.660 66.667 6.13 0.00 39.09 6.53
9257 9604 2.659897 GCGCCTATGTCAGAGCGG 60.660 66.667 13.68 0.00 41.44 5.52
9258 9605 2.659897 GGCGCCTATGTCAGAGCG 60.660 66.667 22.15 8.99 42.96 5.03
9259 9606 2.659897 CGGCGCCTATGTCAGAGC 60.660 66.667 26.68 0.00 0.00 4.09
9260 9607 1.299468 GACGGCGCCTATGTCAGAG 60.299 63.158 26.68 7.84 32.91 3.35
9261 9608 1.320344 AAGACGGCGCCTATGTCAGA 61.320 55.000 27.62 0.00 35.09 3.27
9262 9609 0.872021 GAAGACGGCGCCTATGTCAG 60.872 60.000 27.62 13.59 35.09 3.51
9263 9610 1.141019 GAAGACGGCGCCTATGTCA 59.859 57.895 27.62 0.00 35.09 3.58
9264 9611 0.595310 GAGAAGACGGCGCCTATGTC 60.595 60.000 26.68 23.54 0.00 3.06
9265 9612 1.038130 AGAGAAGACGGCGCCTATGT 61.038 55.000 26.68 15.78 0.00 2.29
9266 9613 0.596083 CAGAGAAGACGGCGCCTATG 60.596 60.000 26.68 12.04 0.00 2.23
9267 9614 1.736586 CAGAGAAGACGGCGCCTAT 59.263 57.895 26.68 13.07 0.00 2.57
9268 9615 2.415608 CCAGAGAAGACGGCGCCTA 61.416 63.158 26.68 0.00 0.00 3.93
9269 9616 3.764466 CCAGAGAAGACGGCGCCT 61.764 66.667 26.68 11.91 0.00 5.52
9270 9617 3.591254 AACCAGAGAAGACGGCGCC 62.591 63.158 19.07 19.07 0.00 6.53
9271 9618 2.048127 AACCAGAGAAGACGGCGC 60.048 61.111 6.90 0.00 0.00 6.53
9272 9619 1.009389 GTCAACCAGAGAAGACGGCG 61.009 60.000 4.80 4.80 0.00 6.46
9273 9620 0.033504 TGTCAACCAGAGAAGACGGC 59.966 55.000 0.00 0.00 33.83 5.68
9274 9621 1.341531 AGTGTCAACCAGAGAAGACGG 59.658 52.381 0.00 0.00 33.83 4.79
9275 9622 2.608261 GGAGTGTCAACCAGAGAAGACG 60.608 54.545 0.00 0.00 33.83 4.18
9276 9623 2.608261 CGGAGTGTCAACCAGAGAAGAC 60.608 54.545 0.00 0.00 0.00 3.01
9277 9624 1.613925 CGGAGTGTCAACCAGAGAAGA 59.386 52.381 0.00 0.00 0.00 2.87
9278 9625 1.937108 GCGGAGTGTCAACCAGAGAAG 60.937 57.143 0.00 0.00 0.00 2.85
9279 9626 0.033504 GCGGAGTGTCAACCAGAGAA 59.966 55.000 0.00 0.00 0.00 2.87
9280 9627 1.666011 GCGGAGTGTCAACCAGAGA 59.334 57.895 0.00 0.00 0.00 3.10
9281 9628 1.374758 GGCGGAGTGTCAACCAGAG 60.375 63.158 0.00 0.00 0.00 3.35
9282 9629 2.741092 GGCGGAGTGTCAACCAGA 59.259 61.111 0.00 0.00 0.00 3.86
9283 9630 2.738521 CGGCGGAGTGTCAACCAG 60.739 66.667 0.00 0.00 0.00 4.00
9284 9631 4.980805 GCGGCGGAGTGTCAACCA 62.981 66.667 9.78 0.00 0.00 3.67
9285 9632 4.681978 AGCGGCGGAGTGTCAACC 62.682 66.667 9.78 0.00 0.00 3.77
9286 9633 3.112709 GAGCGGCGGAGTGTCAAC 61.113 66.667 9.78 0.00 0.00 3.18
9287 9634 3.303135 AGAGCGGCGGAGTGTCAA 61.303 61.111 9.78 0.00 0.00 3.18
9288 9635 4.056125 CAGAGCGGCGGAGTGTCA 62.056 66.667 9.78 0.00 0.00 3.58
9289 9636 3.749064 TCAGAGCGGCGGAGTGTC 61.749 66.667 9.78 0.00 0.00 3.67
9290 9637 4.057428 GTCAGAGCGGCGGAGTGT 62.057 66.667 9.78 0.00 0.00 3.55
9291 9638 2.004808 TATGTCAGAGCGGCGGAGTG 62.005 60.000 9.78 0.00 0.00 3.51
9292 9639 1.729470 CTATGTCAGAGCGGCGGAGT 61.729 60.000 9.78 0.00 0.00 3.85
9293 9640 1.007964 CTATGTCAGAGCGGCGGAG 60.008 63.158 9.78 0.00 0.00 4.63
9294 9641 2.490148 CCTATGTCAGAGCGGCGGA 61.490 63.158 9.78 0.00 0.00 5.54
9295 9642 2.028190 CCTATGTCAGAGCGGCGG 59.972 66.667 9.78 0.00 0.00 6.13
9296 9643 2.659897 GCCTATGTCAGAGCGGCG 60.660 66.667 0.51 0.51 0.00 6.46
9297 9644 2.659897 CGCCTATGTCAGAGCGGC 60.660 66.667 6.13 0.00 39.09 6.53
9298 9645 2.659897 GCGCCTATGTCAGAGCGG 60.660 66.667 13.68 0.00 41.44 5.52
9299 9646 1.300465 ATGCGCCTATGTCAGAGCG 60.300 57.895 4.18 8.99 42.96 5.03
9300 9647 1.226686 CCATGCGCCTATGTCAGAGC 61.227 60.000 4.18 0.00 0.00 4.09
9301 9648 0.390492 TCCATGCGCCTATGTCAGAG 59.610 55.000 4.18 0.00 0.00 3.35
9302 9649 0.104855 GTCCATGCGCCTATGTCAGA 59.895 55.000 4.18 0.00 0.00 3.27
9303 9650 1.217585 CGTCCATGCGCCTATGTCAG 61.218 60.000 4.18 0.00 0.00 3.51
9304 9651 1.227234 CGTCCATGCGCCTATGTCA 60.227 57.895 4.18 0.00 0.00 3.58
9305 9652 3.630204 CGTCCATGCGCCTATGTC 58.370 61.111 4.18 0.00 0.00 3.06
9326 9673 3.917760 CAGGGGATCTCCGGCGAC 61.918 72.222 9.30 0.00 36.71 5.19
9329 9676 3.468326 GAAGCAGGGGATCTCCGGC 62.468 68.421 27.51 27.51 46.10 6.13
9330 9677 2.825264 GAAGCAGGGGATCTCCGG 59.175 66.667 7.51 7.51 36.71 5.14
9331 9678 2.419198 CGAAGCAGGGGATCTCCG 59.581 66.667 5.81 2.27 36.71 4.63
9344 9691 2.105128 CAGGGGAGTAGCGCGAAG 59.895 66.667 12.10 0.00 0.00 3.79
9345 9692 4.143333 GCAGGGGAGTAGCGCGAA 62.143 66.667 12.10 0.00 0.00 4.70
9347 9694 4.577246 GAGCAGGGGAGTAGCGCG 62.577 72.222 0.00 0.00 0.00 6.86
9348 9695 3.145422 GAGAGCAGGGGAGTAGCGC 62.145 68.421 0.00 0.00 0.00 5.92
9349 9696 2.494530 GGAGAGCAGGGGAGTAGCG 61.495 68.421 0.00 0.00 0.00 4.26
9350 9697 2.137528 GGGAGAGCAGGGGAGTAGC 61.138 68.421 0.00 0.00 0.00 3.58
9351 9698 1.830408 CGGGAGAGCAGGGGAGTAG 60.830 68.421 0.00 0.00 0.00 2.57
9352 9699 2.279073 CGGGAGAGCAGGGGAGTA 59.721 66.667 0.00 0.00 0.00 2.59
9394 9741 4.521062 CAGAAGGGAGCGGCGGAG 62.521 72.222 9.78 0.00 0.00 4.63
9398 9745 4.847444 GAGGCAGAAGGGAGCGGC 62.847 72.222 0.00 0.00 0.00 6.53
9399 9746 4.521062 CGAGGCAGAAGGGAGCGG 62.521 72.222 0.00 0.00 0.00 5.52
9429 9776 4.811364 GAGGCAGGCAAGGGAGGC 62.811 72.222 0.00 0.00 0.00 4.70
9430 9777 4.120755 GGAGGCAGGCAAGGGAGG 62.121 72.222 0.00 0.00 0.00 4.30
9431 9778 4.120755 GGGAGGCAGGCAAGGGAG 62.121 72.222 0.00 0.00 0.00 4.30
9434 9781 3.350031 ATTCGGGAGGCAGGCAAGG 62.350 63.158 0.00 0.00 0.00 3.61
9435 9782 1.821332 GATTCGGGAGGCAGGCAAG 60.821 63.158 0.00 0.00 0.00 4.01
9436 9783 1.852157 AAGATTCGGGAGGCAGGCAA 61.852 55.000 0.00 0.00 0.00 4.52
9437 9784 2.257409 GAAGATTCGGGAGGCAGGCA 62.257 60.000 0.00 0.00 0.00 4.75
9438 9785 1.524849 GAAGATTCGGGAGGCAGGC 60.525 63.158 0.00 0.00 0.00 4.85
9439 9786 1.147153 GGAAGATTCGGGAGGCAGG 59.853 63.158 0.00 0.00 0.00 4.85
9440 9787 1.147153 GGGAAGATTCGGGAGGCAG 59.853 63.158 0.00 0.00 0.00 4.85
9441 9788 1.306997 AGGGAAGATTCGGGAGGCA 60.307 57.895 0.00 0.00 0.00 4.75
9442 9789 1.051556 AGAGGGAAGATTCGGGAGGC 61.052 60.000 0.00 0.00 0.00 4.70
9443 9790 1.501582 AAGAGGGAAGATTCGGGAGG 58.498 55.000 0.00 0.00 0.00 4.30
9444 9791 3.636153 AAAAGAGGGAAGATTCGGGAG 57.364 47.619 0.00 0.00 0.00 4.30
9445 9792 3.199289 GGTAAAAGAGGGAAGATTCGGGA 59.801 47.826 0.00 0.00 0.00 5.14
9446 9793 3.542648 GGTAAAAGAGGGAAGATTCGGG 58.457 50.000 0.00 0.00 0.00 5.14
9447 9794 3.054655 TGGGTAAAAGAGGGAAGATTCGG 60.055 47.826 0.00 0.00 0.00 4.30
9448 9795 4.216411 TGGGTAAAAGAGGGAAGATTCG 57.784 45.455 0.00 0.00 0.00 3.34
9449 9796 6.911250 TTTTGGGTAAAAGAGGGAAGATTC 57.089 37.500 0.00 0.00 32.31 2.52
9470 9817 5.739070 GCGGGAGGAAGAAGAAACAATTTTT 60.739 40.000 0.00 0.00 0.00 1.94
9471 9818 4.262036 GCGGGAGGAAGAAGAAACAATTTT 60.262 41.667 0.00 0.00 0.00 1.82
9472 9819 3.255888 GCGGGAGGAAGAAGAAACAATTT 59.744 43.478 0.00 0.00 0.00 1.82
9473 9820 2.820197 GCGGGAGGAAGAAGAAACAATT 59.180 45.455 0.00 0.00 0.00 2.32
9474 9821 2.437413 GCGGGAGGAAGAAGAAACAAT 58.563 47.619 0.00 0.00 0.00 2.71
9475 9822 1.544759 GGCGGGAGGAAGAAGAAACAA 60.545 52.381 0.00 0.00 0.00 2.83
9476 9823 0.036306 GGCGGGAGGAAGAAGAAACA 59.964 55.000 0.00 0.00 0.00 2.83
9477 9824 1.019805 CGGCGGGAGGAAGAAGAAAC 61.020 60.000 0.00 0.00 0.00 2.78
9478 9825 1.295423 CGGCGGGAGGAAGAAGAAA 59.705 57.895 0.00 0.00 0.00 2.52
9479 9826 2.978824 CGGCGGGAGGAAGAAGAA 59.021 61.111 0.00 0.00 0.00 2.52
9480 9827 3.771160 GCGGCGGGAGGAAGAAGA 61.771 66.667 9.78 0.00 0.00 2.87
9511 9858 4.103928 TAGGAGGGAGGGGTGGCC 62.104 72.222 0.00 0.00 0.00 5.36
9512 9859 2.446802 CTAGGAGGGAGGGGTGGC 60.447 72.222 0.00 0.00 0.00 5.01
9513 9860 2.446802 GCTAGGAGGGAGGGGTGG 60.447 72.222 0.00 0.00 0.00 4.61
9514 9861 2.840102 CGCTAGGAGGGAGGGGTG 60.840 72.222 0.00 0.00 0.00 4.61
9515 9862 2.944668 AACGCTAGGAGGGAGGGGT 61.945 63.158 0.00 0.00 31.91 4.95
9516 9863 2.041819 AACGCTAGGAGGGAGGGG 60.042 66.667 0.00 0.00 31.91 4.79
9517 9864 0.760945 ATCAACGCTAGGAGGGAGGG 60.761 60.000 0.00 0.00 31.91 4.30
9518 9865 0.390860 CATCAACGCTAGGAGGGAGG 59.609 60.000 0.00 0.00 31.91 4.30
9519 9866 0.390860 CCATCAACGCTAGGAGGGAG 59.609 60.000 0.00 0.00 37.14 4.30
9520 9867 0.032515 TCCATCAACGCTAGGAGGGA 60.033 55.000 0.00 0.00 41.29 4.20
9521 9868 0.830648 TTCCATCAACGCTAGGAGGG 59.169 55.000 0.00 0.00 36.35 4.30
9522 9869 1.757118 TCTTCCATCAACGCTAGGAGG 59.243 52.381 0.00 0.00 0.00 4.30
9523 9870 3.452474 CTTCTTCCATCAACGCTAGGAG 58.548 50.000 0.00 0.00 0.00 3.69
9524 9871 2.418746 GCTTCTTCCATCAACGCTAGGA 60.419 50.000 0.00 0.00 0.00 2.94
9525 9872 1.936547 GCTTCTTCCATCAACGCTAGG 59.063 52.381 0.00 0.00 0.00 3.02
9526 9873 2.621338 TGCTTCTTCCATCAACGCTAG 58.379 47.619 0.00 0.00 0.00 3.42
9527 9874 2.760634 TGCTTCTTCCATCAACGCTA 57.239 45.000 0.00 0.00 0.00 4.26
9528 9875 1.741706 CATGCTTCTTCCATCAACGCT 59.258 47.619 0.00 0.00 0.00 5.07
9529 9876 1.202222 CCATGCTTCTTCCATCAACGC 60.202 52.381 0.00 0.00 0.00 4.84
9530 9877 1.202222 GCCATGCTTCTTCCATCAACG 60.202 52.381 0.00 0.00 0.00 4.10
9531 9878 1.135721 GGCCATGCTTCTTCCATCAAC 59.864 52.381 0.00 0.00 0.00 3.18
9532 9879 1.477553 GGCCATGCTTCTTCCATCAA 58.522 50.000 0.00 0.00 0.00 2.57
9533 9880 0.749091 CGGCCATGCTTCTTCCATCA 60.749 55.000 2.24 0.00 0.00 3.07
9534 9881 1.450531 CCGGCCATGCTTCTTCCATC 61.451 60.000 2.24 0.00 0.00 3.51
9535 9882 1.454479 CCGGCCATGCTTCTTCCAT 60.454 57.895 2.24 0.00 0.00 3.41
9536 9883 2.045045 CCGGCCATGCTTCTTCCA 60.045 61.111 2.24 0.00 0.00 3.53
9537 9884 3.521796 GCCGGCCATGCTTCTTCC 61.522 66.667 18.11 0.00 0.00 3.46
9538 9885 3.521796 GGCCGGCCATGCTTCTTC 61.522 66.667 40.73 8.62 35.81 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.